Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:24:37 (3599176): wrapper (7.7.26015): starting
19:24:37 (3599176): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 19:24:37] Arguments: --nthreads 12
[2025-10-09 19:24:37] Threads: 12
[2025-10-09 19:24:37] Checking for CVMFS
[2025-10-09 19:24:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 19:24:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 19:24:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 19:24:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 19:24:39] 2.13.2.0 8216 20871 315408 151513 1 592 29103395 46080000 49805 130560 0 140509939 99.876 45016308 22460 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-09 19:24:39] CVMFS is ok
[2025-10-09 19:24:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 19:24:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 19:24:39] Further information can be found at the LHC@home message board.
[2025-10-09 19:24:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 19:24:39] Checking for apptainer binary...
[2025-10-09 19:24:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 19:24:39] Running /usr/bin/apptainer --version
[2025-10-09 19:24:40] apptainer version 1.4.2-1.el9
[2025-10-09 19:24:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 19:24:40] mff2103.farm.particle.cz
[2025-10-09 19:24:40] apptainer works
[2025-10-09 19:24:40] Set ATHENA_PROC_NUMBER=12
[2025-10-09 19:24:40] Set ATHENA_CORE_NUMBER=12
[2025-10-09 19:24:41] Starting ATLAS job with PandaID=6826358443
[2025-10-09 19:24:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 21:11:38]  *** The last 200 lines of the pilot log: ***
[2025-10-09 21:11:38] 2025-10-09 19:09:51,403 | INFO     | time since job start (6229s) is within the limit (172800.0s)
[2025-10-09 21:11:38] 2025-10-09 19:09:53,410 | INFO     | time since job start (6231s) is within the limit (172800.0s)
[2025-10-09 21:11:38] 2025-10-09 19:09:53,795 | INFO     | monitor loop #431: job 0:6826358443 is in state 'finished'
[2025-10-09 21:11:38] 2025-10-09 19:09:53,795 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 21:11:38] 2025-10-09 19:09:55,418 | INFO     | time since job start (6233s) is within the limit (172800.0s)
[2025-10-09 21:11:38] 2025-10-09 19:09:56,303 | INFO     | monitor loop #432: job 0:6826358443 is in state 'finished'
[2025-10-09 21:11:38] 2025-10-09 19:09:56,303 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 21:11:38] 2025-10-09 19:09:57,432 | INFO     | time since job start (6235s) is within the limit (172800.0s)
[2025-10-09 21:11:38] 2025-10-09 19:09:58,809 | INFO     | monitor loop #433: job 0:6826358443 is in state 'finished'
[2025-10-09 21:11:38] 2025-10-09 19:09:58,809 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 21:11:38] 2025-10-09 19:09:59,441 | INFO     | time since job start (6237s) is within the limit (172800.0s)
[2025-10-09 21:11:38] 2025-10-09 19:10:01,314 | INFO     | monitor loop #434: job 0:6826358443 is in state 'finished'
[2025-10-09 21:11:38] 2025-10-09 19:10:01,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 21:11:38] 2025-10-09 19:10:01,450 | INFO     | time since job start (6239s) is within the limit (172800.0s)
[2025-10-09 21:11:38] 2025-10-09 19:10:03,457 | INFO     | time since job start (6241s) is within the limit (172800.0s)
[2025-10-09 21:11:38] 2025-10-09 19:10:03,822 | INFO     | monitor loop #435: job 0:6826358443 is in state 'finished'
[2025-10-09 21:11:38] 2025-10-09 19:10:03,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 21:11:38] 2025-10-09 19:10:05,466 | INFO     | time since job start (6243s) is within the limit (172800.0s)
[2025-10-09 21:11:38] 2025-10-09 19:10:06,331 | INFO     | monitor loop #436: job 0:6826358443 is in state 'finished'
[2025-10-09 21:11:38] 2025-10-09 19:10:06,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 21:11:38] 2025-10-09 19:10:07,935 | INFO     | PID=3620475 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 21:11:38] 2025-10-09 19:10:07,936 | INFO     | .. there are 86 such processes running
[2025-10-09 21:11:38] 2025-10-09 19:10:08,850 | INFO     | monitor loop #437: job 0:6826358443 is in state 'finished'
[2025-10-09 21:11:38] 2025-10-09 19:10:08,850 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 21:11:38] 2025-10-09 19:10:08,942 | INFO     | time since job start (6246s) is within the limit (172800.0s)
[2025-10-09 21:11:38] 2025-10-09 19:10:10,954 | INFO     | time since job start (6248s) is within the limit (172800.0s)
[2025-10-09 21:11:38] 2025-10-09 19:10:11,358 | INFO     | monitor loop #438: job 0:6826358443 is in state 'finished'
[2025-10-09 21:11:38] 2025-10-09 19:10:11,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 21:11:38] 2025-10-09 19:10:12,968 | INFO     | time since job start (6250s) is within the limit (172800.0s)
[2025-10-09 21:11:38] 2025-10-09 19:10:13,864 | INFO     | monitor loop #439: job 0:6826358443 is in state 'finished'
[2025-10-09 21:11:38] 2025-10-09 19:10:13,864 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 21:11:38] 2025-10-09 19:10:14,799 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-09 21:11:38] 2025-10-09 19:10:14,822 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2807.5130208333335
[2025-10-09 21:11:38] 2025-10-09 19:10:14,860 | INFO     | using path: /scratch/.boinc/slots/7/PanDA_Pilot-6826358443/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 21:11:38] 2025-10-09 19:10:14,861 | INFO     | extracted standard info from prmon json
[2025-10-09 21:11:38] 2025-10-09 19:10:14,861 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 21:11:38] 2025-10-09 19:10:14,861 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 21:11:38] 2025-10-09 19:10:14,862 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 21:11:38] 2025-10-09 19:10:14,862 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 21:11:38] 2025-10-09 19:10:14,864 | INFO     | fitting pss+swap vs Time
[2025-10-09 21:11:38] 2025-10-09 19:10:14,864 | INFO     | sum of square deviations: 241430070.9891305
[2025-10-09 21:11:38] 2025-10-09 19:10:14,864 | INFO     | sum of deviations: 1390479815.9021733
[2025-10-09 21:11:38] 2025-10-09 19:10:14,868 | INFO     | mean x: 1760034026.5108695
[2025-10-09 21:11:38] 2025-10-09 19:10:14,869 | INFO     | mean y: 2703725.597826087
[2025-10-09 21:11:38] 2025-10-09 19:10:14,869 | INFO     | -- intersect: -10133944866.426882
[2025-10-09 21:11:38] 2025-10-09 19:10:14,869 | INFO     | intersect: -10133944866.426882
[2025-10-09 21:11:38] 2025-10-09 19:10:14,869 | INFO     | chi2: 0.09234708398927093
[2025-10-09 21:11:38] 2025-10-09 19:10:14,869 | INFO     | -- intersect: -10133944866.426882
[2025-10-09 21:11:38] 2025-10-09 19:10:14,869 | INFO     | current memory leak: 5.76 B/s (using 92 data points, chi2=0.09)
[2025-10-09 21:11:38] 2025-10-09 19:10:14,870 | INFO     | could have reported an average CPU frequency of 2830 MHz (7 samples)
[2025-10-09 21:11:38] 2025-10-09 19:10:14,870 | INFO     | ..............................
[2025-10-09 21:11:38] 2025-10-09 19:10:14,870 | INFO     | . Timing measurements:
[2025-10-09 21:11:38] 2025-10-09 19:10:14,870 | INFO     | . get job = 0 s
[2025-10-09 21:11:38] 2025-10-09 19:10:14,871 | INFO     | . initial setup = 4 s
[2025-10-09 21:11:38] 2025-10-09 19:10:14,871 | INFO     | . payload setup = 54 s
[2025-10-09 21:11:38] 2025-10-09 19:10:14,871 | INFO     | . stage-in = 0 s
[2025-10-09 21:11:38] 2025-10-09 19:10:14,871 | INFO     | . payload execution = 6063 s
[2025-10-09 21:11:38] 2025-10-09 19:10:14,871 | INFO     | . stage-out = 2 s
[2025-10-09 21:11:38] 2025-10-09 19:10:14,871 | INFO     | . log creation = 0 s
[2025-10-09 21:11:38] 2025-10-09 19:10:14,871 | INFO     | ..............................
[2025-10-09 21:11:38] 2025-10-09 19:10:14,989 | INFO     | time since job start (6252s) is within the limit (172800.0s)
[2025-10-09 21:11:38] 2025-10-09 19:10:15,007 | INFO     | 
[2025-10-09 21:11:38] 2025-10-09 19:10:15,007 | INFO     | job summary report
[2025-10-09 21:11:38] 2025-10-09 19:10:15,007 | INFO     | --------------------------------------------------
[2025-10-09 21:11:38] 2025-10-09 19:10:15,007 | INFO     | PanDA job id: 6826358443
[2025-10-09 21:11:38] 2025-10-09 19:10:15,007 | INFO     | task id: 46373048
[2025-10-09 21:11:38] 2025-10-09 19:10:15,007 | INFO     | errors: (none)
[2025-10-09 21:11:38] 2025-10-09 19:10:15,007 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 21:11:38] 2025-10-09 19:10:15,007 | INFO     | pilot state: finished 
[2025-10-09 21:11:38] 2025-10-09 19:10:15,007 | INFO     | transexitcode: 0
[2025-10-09 21:11:38] 2025-10-09 19:10:15,008 | INFO     | exeerrorcode: 0
[2025-10-09 21:11:38] 2025-10-09 19:10:15,008 | INFO     | exeerrordiag: 
[2025-10-09 21:11:38] 2025-10-09 19:10:15,008 | INFO     | exitcode: 0
[2025-10-09 21:11:38] 2025-10-09 19:10:15,008 | INFO     | exitmsg: OK
[2025-10-09 21:11:38] 2025-10-09 19:10:15,008 | INFO     | cpuconsumptiontime: 47361 s
[2025-10-09 21:11:38] 2025-10-09 19:10:15,008 | INFO     | nevents: 400
[2025-10-09 21:11:38] 2025-10-09 19:10:15,008 | INFO     | neventsw: 0
[2025-10-09 21:11:38] 2025-10-09 19:10:15,008 | INFO     | pid: 3664743
[2025-10-09 21:11:38] 2025-10-09 19:10:15,008 | INFO     | pgrp: 3664743
[2025-10-09 21:11:38] 2025-10-09 19:10:15,008 | INFO     | corecount: 12
[2025-10-09 21:11:38] 2025-10-09 19:10:15,008 | INFO     | event service: False
[2025-10-09 21:11:38] 2025-10-09 19:10:15,008 | INFO     | sizes: {0: 2348842, 11: 2348842, 22: 2348870, 33: 2348898, 42: 2349216, 43: 2349272, 6121: 2376403, 6122: 2376402, 6124: 2385514, 6166: 2385652}
[2025-10-09 21:11:38] 2025-10-09 19:10:15,009 | INFO     | --------------------------------------------------
[2025-10-09 21:11:38] 2025-10-09 19:10:15,009 | INFO     | 
[2025-10-09 21:11:38] 2025-10-09 19:10:15,009 | INFO     | executing command: ls -lF /scratch/.boinc/slots/7
[2025-10-09 21:11:38] 2025-10-09 19:10:15,166 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,166 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,167 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,167 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,167 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,167 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,167 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,167 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,167 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,167 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,167 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,168 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 21:11:38] 2025-10-09 19:10:15,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,168 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 21:11:38] 2025-10-09 19:10:15,168 | INFO     | job 6826358443 has completed (purged errors)
[2025-10-09 21:11:38] 2025-10-09 19:10:15,168 | INFO     | overall cleanup function is called
[2025-10-09 21:11:38] 2025-10-09 19:10:16,184 | INFO     | --- collectZombieJob: --- 10, [3664743]
[2025-10-09 21:11:38] 2025-10-09 19:10:16,184 | INFO     | zombie collector waiting for pid 3664743
[2025-10-09 21:11:38] 2025-10-09 19:10:16,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 21:11:38] 2025-10-09 19:10:16,184 | INFO     | collected zombie processes
[2025-10-09 21:11:38] 2025-10-09 19:10:16,184 | INFO     | will attempt to kill all subprocesses of pid=3664743
[2025-10-09 21:11:38] 2025-10-09 19:10:17,178 | INFO     | process IDs to be killed: [3664743] (in reverse order)
[2025-10-09 21:11:38] 2025-10-09 19:10:17,745 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 21:11:38] 2025-10-09 19:10:17,750 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 21:11:38] 2025-10-09 19:10:17,798 | INFO     | did not find any defunct processes belonging to 3664743
[2025-10-09 21:11:38] 2025-10-09 19:10:17,827 | INFO     | did not find any defunct processes belonging to 3664743
[2025-10-09 21:11:38] 2025-10-09 19:10:17,827 | INFO     | ready for new job
[2025-10-09 21:11:38] 2025-10-09 19:10:17,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 21:11:38] 2025-10-09 19:10:17,829 | INFO     | ***************************************
[2025-10-09 21:11:38] 2025-10-09 19:10:17,829 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 21:11:38] 2025-10-09 19:10:17,829 | INFO     | ***************************************
[2025-10-09 21:11:38] 2025-10-09 19:10:17,829 | INFO     | 
[2025-10-09 21:11:38] 2025-10-09 19:10:17,836 | INFO     | architecture information:
[2025-10-09 21:11:38] 2025-10-09 19:10:17,837 | INFO     | executing command: cat /etc/os-release
[2025-10-09 21:11:38] 2025-10-09 19:10:17,951 | INFO     | cat /etc/os-release:
[2025-10-09 21:11:38] NAME="CentOS Linux"
[2025-10-09 21:11:38] VERSION="7 (Core)"
[2025-10-09 21:11:38] ID="centos"
[2025-10-09 21:11:38] ID_LIKE="rhel fedora"
[2025-10-09 21:11:38] VERSION_ID="7"
[2025-10-09 21:11:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 21:11:38] ANSI_COLOR="0;31"
[2025-10-09 21:11:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 21:11:38] HOME_URL="https://www.centos.org/"
[2025-10-09 21:11:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 21:11:38] 
[2025-10-09 21:11:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 21:11:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 21:11:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 21:11:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 21:11:38] 
[2025-10-09 21:11:38] 2025-10-09 19:10:17,951 | INFO     | ***************************************
[2025-10-09 21:11:38] 2025-10-09 19:10:18,455 | INFO     | executing command: df -mP /scratch/.boinc/slots/7
[2025-10-09 21:11:38] 2025-10-09 19:10:18,553 | INFO     | sufficient remaining disk space (1664737083392 B)
[2025-10-09 21:11:38] 2025-10-09 19:10:18,554 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 21:11:38] 2025-10-09 19:10:18,554 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 21:11:38] 2025-10-09 19:10:18,554 | INFO     | update_server=False
[2025-10-09 21:11:38] 2025-10-09 19:10:18,554 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 21:11:38] 2025-10-09 19:10:18,782 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 21:11:38] 2025-10-09 19:10:18,899 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 21:11:38] 2025-10-09 19:10:18,899 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 21:11:38] 2025-10-09 19:10:18,899 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 21:11:38] 2025-10-09 19:10:18,899 | INFO     | will abort loop
[2025-10-09 21:11:38] 2025-10-09 19:10:18,972 | INFO     | all payload control threads have been joined
[2025-10-09 21:11:38] 2025-10-09 19:10:19,257 | INFO     | all data control threads have been joined
[2025-10-09 21:11:38] 2025-10-09 19:10:19,560 | INFO     | [job] retrieve thread has finished
[2025-10-09 21:11:38] 2025-10-09 19:10:19,794 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 21:11:38] 2025-10-09 19:10:19,819 | INFO     | [payload] failed_post thread has finished
[2025-10-09 21:11:38] 2025-10-09 19:10:19,905 | INFO     | [job] job monitor thread has finished
[2025-10-09 21:11:38] 2025-10-09 19:10:19,930 | INFO     | all job control threads have been joined
[2025-10-09 21:11:38] 2025-10-09 19:10:19,966 | INFO     | [payload] validate_post thread has finished
[2025-10-09 21:11:38] 2025-10-09 19:10:19,978 | INFO     | [payload] control thread has finished
[2025-10-09 21:11:38] 2025-10-09 19:10:20,017 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 21:11:38] 2025-10-09 19:10:20,025 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 21:11:38] 2025-10-09 19:10:20,114 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 21:11:38] 2025-10-09 19:10:20,264 | INFO     | [data] control thread has finished
[2025-10-09 21:11:38] 2025-10-09 19:10:20,348 | INFO     | [job] validate thread has finished
[2025-10-09 21:11:38] 2025-10-09 19:10:20,350 | INFO     | [data] copytool_in thread has finished
[2025-10-09 21:11:38] 2025-10-09 19:10:20,431 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 21:11:38] 2025-10-09 19:10:20,790 | INFO     | [data] copytool_out thread has finished
[2025-10-09 21:11:38] 2025-10-09 19:10:20,937 | INFO     | [job] control thread has finished
[2025-10-09 21:11:38] 2025-10-09 19:10:21,023 | INFO     | [job] queue monitor thread has finished
[2025-10-09 21:11:38] 2025-10-09 19:10:24,033 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 21:11:38] 2025-10-09 19:10:29,090 | INFO     | job.realtimelogging is not enabled
[2025-10-09 21:11:38] 2025-10-09 19:10:30,099 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 21:11:38] 2025-10-09 19:10:49,087 | INFO     | PID=3620475 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 21:11:38] 2025-10-09 19:10:49,087 | INFO     | .. there are 86 such processes running
[2025-10-09 21:11:38] 2025-10-09 19:10:49,087 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 21:11:38] 2025-10-09 19:10:49,088 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 21:11:38] 2025-10-09 19:10:49,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 21:11:38] 2025-10-09 19:10:55,228 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-10-09 21:11:38] 2025-10-09 19:11:12,595 | INFO     | [monitor] cgroup control has ended
[2025-10-09 21:11:38] 2025-10-09 19:11:14,583 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139624789083968)>', '<ExcThread(monitor, started 139624076797696)>']
[2025-10-09 21:11:38] 2025-10-09 19:11:15,256 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 21:11:38] 2025-10-09 19:11:15,257 | INFO     | [monitor] control thread has ended
[2025-10-09 21:11:38] 2025-10-09 19:11:19,609 | INFO     | all workflow threads have been joined
[2025-10-09 21:11:38] 2025-10-09 19:11:19,609 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 21:11:38] 2025-10-09 19:11:19,609 | INFO     | traces error code: 0
[2025-10-09 21:11:38] 2025-10-09 19:11:19,609 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 21:11:38] 2025-10-09 19:11:19,899 [wrapper] ==== pilot stdout END ====
[2025-10-09 21:11:38] 2025-10-09 19:11:19,953 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 21:11:38] 2025-10-09 19:11:19,980 [wrapper] pilotpid: 3620475
[2025-10-09 21:11:38] 2025-10-09 19:11:20,010 [wrapper] Pilot exit status: 0
[2025-10-09 21:11:38] 2025-10-09 19:11:20,188 [wrapper] pandaids: 6826358443
[2025-10-09 21:11:38] 2025-10-09 19:11:20,749 [wrapper] cleanup supervisor_pilot 3972643 3620476
[2025-10-09 21:11:38] 2025-10-09 19:11:20,792 [wrapper] Test setup, not cleaning
[2025-10-09 21:11:38] 2025-10-09 19:11:20,814 [wrapper] apfmon messages muted
[2025-10-09 21:11:38] 2025-10-09 19:11:20,848 [wrapper] ==== wrapper stdout END ====
[2025-10-09 21:11:38] 2025-10-09 19:11:20,895 [wrapper] ==== wrapper stderr END ====
[2025-10-09 21:11:38]  *** Error codes and diagnostics ***
[2025-10-09 21:11:38]     "exeErrorCode": 0,
[2025-10-09 21:11:38]     "exeErrorDiag": "",
[2025-10-09 21:11:38]     "pilotErrorCode": 0,
[2025-10-09 21:11:38]     "pilotErrorDiag": "",
[2025-10-09 21:11:38]  *** Listing of results directory ***
[2025-10-09 21:11:38] total 415064
[2025-10-09 21:11:38] -rw-r--r-- 1 boinc boinc    552446 Oct  1 08:53 pilot3.tar.gz
[2025-10-09 21:11:38] -rwx------ 1 boinc boinc     36292 Oct  1 08:56 runpilot2-wrapper.sh
[2025-10-09 21:11:38] -rw-r--r-- 1 boinc boinc      5112 Oct  1 08:56 queuedata.json
[2025-10-09 21:11:38] -rw-r--r-- 1 boinc boinc       100 Oct  9 19:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 21:11:38] -rwxr-xr-x 1 boinc boinc      7986 Oct  9 19:24 run_atlas
[2025-10-09 21:11:38] -rw-r--r-- 1 boinc boinc       105 Oct  9 19:24 job.xml
[2025-10-09 21:11:38] -rw-r--r-- 1 boinc boinc      6665 Oct  9 19:24 init_data.xml
[2025-10-09 21:11:38] -rw-r--r-- 2 boinc boinc 219413982 Oct  9 19:24 EVNT.46373045._002633.pool.root.1
[2025-10-09 21:11:38] -rw-r--r-- 2 boinc boinc     15120 Oct  9 19:24 start_atlas.sh
[2025-10-09 21:11:38] drwxrwx--x 2 boinc boinc      4096 Oct  9 19:24 shared
[2025-10-09 21:11:38] -rw-r--r-- 2 boinc boinc    565599 Oct  9 19:24 input.tar.gz
[2025-10-09 21:11:38] -rw-r--r-- 1 boinc boinc         0 Oct  9 19:24 boinc_lockfile
[2025-10-09 21:11:38] -rw-r--r-- 1 boinc boinc      2538 Oct  9 19:24 pandaJob.out
[2025-10-09 21:11:38] -rw------- 1 boinc boinc    975446 Oct  9 19:25 agis_schedconf.cvmfs.json
[2025-10-09 21:11:38] -rw------- 1 boinc boinc   1560401 Oct  9 19:25 agis_ddmendpoints.agis.ALL.json
[2025-10-09 21:11:38] drwx------ 4 boinc boinc      4096 Oct  9 19:26 pilot3
[2025-10-09 21:11:38] -rw------- 1 boinc boinc 199196850 Oct  9 21:08 HITS.46373048._078628.pool.root.1
[2025-10-09 21:11:38] -rw-r--r-- 1 boinc boinc       528 Oct  9 21:08 boinc_task_state.xml
[2025-10-09 21:11:38] -rw------- 1 boinc boinc      1022 Oct  9 21:09 memory_monitor_summary.json
[2025-10-09 21:11:38] -rw------- 1 boinc boinc    416193 Oct  9 21:09 log.46373048._078628.job.log.tgz.1
[2025-10-09 21:11:38] -rw------- 1 boinc boinc        95 Oct  9 21:09 pilot_heartbeat.json
[2025-10-09 21:11:38] -rw------- 1 boinc boinc      7787 Oct  9 21:10 heartbeat.json
[2025-10-09 21:11:38] -rw------- 1 boinc boinc      5085 Oct  9 21:11 pilotlog.txt
[2025-10-09 21:11:38] -rw------- 1 boinc boinc    846731 Oct  9 21:11 log.46373048._078628.job.log.1
[2025-10-09 21:11:38] -rw------- 1 boinc boinc       357 Oct  9 21:11 output.list
[2025-10-09 21:11:38] -rw-r--r-- 1 boinc boinc       620 Oct  9 21:11 runtime_log
[2025-10-09 21:11:38] -rw------- 1 boinc boinc   1280000 Oct  9 21:11 result.tar.gz
[2025-10-09 21:11:38] -rw-r--r-- 1 boinc boinc      8764 Oct  9 21:11 runtime_log.err
[2025-10-09 21:11:38] -rw------- 1 boinc boinc       663 Oct  9 21:11 k2INDmdw5N8n9Rq4apOajLDm4fhM0noT9bVof3QYDmTV7LDmLo9aNo.diag
[2025-10-09 21:11:38] -rw-r--r-- 1 boinc boinc        25 Oct  9 21:11 wrapper_checkpoint.txt
[2025-10-09 21:11:38] -rw-r--r-- 1 boinc boinc      8192 Oct  9 21:11 boinc_mmap_file
[2025-10-09 21:11:38] -rw-r--r-- 1 boinc boinc     22297 Oct  9 21:11 stderr.txt
[2025-10-09 21:11:38] HITS file was successfully produced:
[2025-10-09 21:11:38] -rw------- 1 boinc boinc 199196850 Oct  9 21:08 shared/HITS.pool.root.1
[2025-10-09 21:11:38]  *** Contents of shared directory: ***
[2025-10-09 21:11:38] total 410636
[2025-10-09 21:11:38] -rw-r--r-- 2 boinc boinc 219413982 Oct  9 19:24 ATLAS.root_0
[2025-10-09 21:11:38] -rw-r--r-- 2 boinc boinc     15120 Oct  9 19:24 start_atlas.sh
[2025-10-09 21:11:38] -rw-r--r-- 2 boinc boinc    565599 Oct  9 19:24 input.tar.gz
[2025-10-09 21:11:38] -rw------- 1 boinc boinc 199196850 Oct  9 21:08 HITS.pool.root.1
[2025-10-09 21:11:38] -rw------- 1 boinc boinc   1280000 Oct  9 21:11 result.tar.gz
21:11:40 (3599176): run_atlas exited; CPU time 47669.521285
21:11:40 (3599176): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN