Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:20:47 (510401): wrapper (7.7.26015): starting
16:20:47 (510401): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 16:20:47] Arguments: --nthreads 12
[2025-10-09 16:20:47] Threads: 12
[2025-10-09 16:20:47] Checking for CVMFS
[2025-10-09 16:20:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 16:20:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 16:20:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 16:20:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 16:20:49] 2.13.2.0 5698 1633 125016 151522 0 65 29312434 32935937 16201 16776704 0 3815337 99.462 4594551 25599 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 16:20:49] CVMFS is ok
[2025-10-09 16:20:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 16:20:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 16:20:49] Further information can be found at the LHC@home message board.
[2025-10-09 16:20:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 16:20:49] Checking for apptainer binary...
[2025-10-09 16:20:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 16:20:49] Running /usr/bin/apptainer --version
[2025-10-09 16:20:49] apptainer version 1.4.3-1.el9
[2025-10-09 16:20:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 16:20:50] c-6-4.aglt2.org
[2025-10-09 16:20:50] apptainer works
[2025-10-09 16:20:50] Set ATHENA_PROC_NUMBER=12
[2025-10-09 16:20:50] Set ATHENA_CORE_NUMBER=12
[2025-10-09 16:20:50] Starting ATLAS job with PandaID=6837337014
[2025-10-09 16:20:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 21:26:11]  *** The last 200 lines of the pilot log: ***
[2025-10-09 21:26:11] 2025-10-10 01:25:15,620 | INFO     | fitting pss+swap vs Time
[2025-10-09 21:26:11] 2025-10-10 01:25:15,621 | INFO     | sum of square deviations: 8122519545.925922
[2025-10-09 21:26:11] 2025-10-10 01:25:15,630 | INFO     | sum of deviations: -142078487071.88892
[2025-10-09 21:26:11] 2025-10-10 01:25:15,631 | INFO     | mean x: 1760050399.2962964
[2025-10-09 21:26:11] 2025-10-10 01:25:15,631 | INFO     | mean y: 2324874.101010101
[2025-10-09 21:26:11] 2025-10-10 01:25:15,631 | INFO     | -- intersect: 30788991066.578075
[2025-10-09 21:26:11] 2025-10-10 01:25:15,631 | INFO     | intersect: 30788991066.578075
[2025-10-09 21:26:11] 2025-10-10 01:25:15,631 | INFO     | chi2: 3.581492111470367
[2025-10-09 21:26:11] 2025-10-10 01:25:15,632 | INFO     | sum of square deviations: 7719188638.640411
[2025-10-09 21:26:11] 2025-10-10 01:25:15,709 | INFO     | sum of deviations: -95516259471.90065
[2025-10-09 21:26:11] 2025-10-10 01:25:15,710 | INFO     | mean x: 1760050246.8116438
[2025-10-09 21:26:11] 2025-10-10 01:25:15,710 | INFO     | mean y: 2342370.147260274
[2025-10-09 21:26:11] 2025-10-10 01:25:15,710 | INFO     | -- intersect: 21780980505.3145
[2025-10-09 21:26:11] 2025-10-10 01:25:15,710 | INFO     | intersect: 21780980505.3145
[2025-10-09 21:26:11] 2025-10-10 01:25:15,710 | INFO     | chi2: 2.1667087070495272
[2025-10-09 21:26:11] 2025-10-10 01:25:15,711 | INFO     | current chi2=2.1667087070495272 (change=39.50262517372979 %)
[2025-10-09 21:26:11] 2025-10-10 01:25:15,711 | INFO     | sum of square deviations: 7329368011.777025
[2025-10-09 21:26:11] 2025-10-10 01:25:15,741 | INFO     | sum of deviations: -85077564830.39021
[2025-10-09 21:26:11] 2025-10-10 01:25:15,742 | INFO     | mean x: 1760050094.3135889
[2025-10-09 21:26:11] 2025-10-10 01:25:15,742 | INFO     | mean y: 2346452.048780488
[2025-10-09 21:26:11] 2025-10-10 01:25:15,742 | INFO     | -- intersect: 20432590337.072876
[2025-10-09 21:26:11] 2025-10-10 01:25:15,742 | INFO     | intersect: 20432590337.072876
[2025-10-09 21:26:11] 2025-10-10 01:25:15,743 | INFO     | chi2: 2.153510430749582
[2025-10-09 21:26:11] 2025-10-10 01:25:15,743 | INFO     | current chi2=2.153510430749582 (change=0.6091393945574567 %)
[2025-10-09 21:26:11] 2025-10-10 01:25:15,743 | INFO     | right removable region: 286
[2025-10-09 21:26:11] 2025-10-10 01:25:15,777 | INFO     | sum of square deviations: 7718989897.380137
[2025-10-09 21:26:11] 2025-10-10 01:25:15,779 | INFO     | sum of deviations: -188100646858.99304
[2025-10-09 21:26:11] 2025-10-10 01:25:15,779 | INFO     | mean x: 1760050551.8184931
[2025-10-09 21:26:11] 2025-10-10 01:25:15,780 | INFO     | mean y: 2342168.9246575343
[2025-10-09 21:26:11] 2025-10-10 01:25:15,780 | INFO     | -- intersect: 42892234720.01504
[2025-10-09 21:26:11] 2025-10-10 01:25:15,780 | INFO     | intersect: 42892234720.01504
[2025-10-09 21:26:11] 2025-10-10 01:25:15,780 | INFO     | chi2: 2.0391529298248336
[2025-10-09 21:26:11] 2025-10-10 01:25:15,802 | INFO     | current chi2=2.0391529298248336 (change=43.06415129900516 %)
[2025-10-09 21:26:11] 2025-10-10 01:25:15,802 | INFO     | sum of square deviations: 7329184157.777025
[2025-10-09 21:26:11] 2025-10-10 01:25:15,805 | INFO     | sum of deviations: -181508435925.86752
[2025-10-09 21:26:11] 2025-10-10 01:25:15,805 | INFO     | mean x: 1760050704.3135889
[2025-10-09 21:26:11] 2025-10-10 01:25:15,805 | INFO     | mean y: 2339567.3763066204
[2025-10-09 21:26:11] 2025-10-10 01:25:15,805 | INFO     | -- intersect: 43590281091.69952
[2025-10-09 21:26:11] 2025-10-10 01:25:15,805 | INFO     | intersect: 43590281091.69952
[2025-10-09 21:26:11] 2025-10-10 01:25:15,806 | INFO     | chi2: 2.0163417725683908
[2025-10-09 21:26:11] 2025-10-10 01:25:15,806 | INFO     | current chi2=2.0163417725683908 (change=1.1186584842561271 %)
[2025-10-09 21:26:11] 2025-10-10 01:25:15,806 | INFO     | left removable region: 20
[2025-10-09 21:26:11] 2025-10-10 01:25:15,826 | INFO     | sum of square deviations: 5835015826.72184
[2025-10-09 21:26:11] 2025-10-10 01:25:15,829 | INFO     | sum of deviations: -98903769316.60162
[2025-10-09 21:26:11] 2025-10-10 01:25:15,829 | INFO     | mean x: 1760050673.8345864
[2025-10-09 21:26:11] 2025-10-10 01:25:15,829 | INFO     | mean y: 2353519.8045112784
[2025-10-09 21:26:11] 2025-10-10 01:25:15,829 | INFO     | -- intersect: 29835288168.11759
[2025-10-09 21:26:11] 2025-10-10 01:25:15,829 | INFO     | intersect: 29835288168.11759
[2025-10-09 21:26:11] 2025-10-10 01:25:15,830 | INFO     | chi2: 0.5227063434102466
[2025-10-09 21:26:11] 2025-10-10 01:25:15,830 | INFO     | -- intersect: 29835288168.11759
[2025-10-09 21:26:11] 2025-10-10 01:25:15,830 | INFO     | current memory leak: -16.95 B/s (using 266 data points, chi2=0.52)
[2025-10-09 21:26:11] 2025-10-10 01:25:15,835 | INFO     | could have reported an average CPU frequency of 2600 MHz (13 samples)
[2025-10-09 21:26:11] 2025-10-10 01:25:15,835 | INFO     | ..............................
[2025-10-09 21:26:11] 2025-10-10 01:25:15,835 | INFO     | . Timing measurements:
[2025-10-09 21:26:11] 2025-10-10 01:25:15,836 | INFO     | . get job = 0 s
[2025-10-09 21:26:11] 2025-10-10 01:25:15,836 | INFO     | . initial setup = 4 s
[2025-10-09 21:26:11] 2025-10-10 01:25:15,836 | INFO     | . payload setup = 17 s
[2025-10-09 21:26:11] 2025-10-10 01:25:15,836 | INFO     | . stage-in = 0 s
[2025-10-09 21:26:11] 2025-10-10 01:25:15,836 | INFO     | . payload execution = 18111 s
[2025-10-09 21:26:11] 2025-10-10 01:25:15,836 | INFO     | . stage-out = 9 s
[2025-10-09 21:26:11] 2025-10-10 01:25:15,836 | INFO     | . log creation = 1 s
[2025-10-09 21:26:11] 2025-10-10 01:25:15,836 | INFO     | ..............................
[2025-10-09 21:26:11] 2025-10-10 01:25:16,248 | INFO     | 
[2025-10-09 21:26:11] 2025-10-10 01:25:16,248 | INFO     | job summary report
[2025-10-09 21:26:11] 2025-10-10 01:25:16,248 | INFO     | --------------------------------------------------
[2025-10-09 21:26:11] 2025-10-10 01:25:16,248 | INFO     | PanDA job id: 6837337014
[2025-10-09 21:26:11] 2025-10-10 01:25:16,248 | INFO     | task id: 46676269
[2025-10-09 21:26:11] 2025-10-10 01:25:16,248 | INFO     | errors: (none)
[2025-10-09 21:26:11] 2025-10-10 01:25:16,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 21:26:11] 2025-10-10 01:25:16,249 | INFO     | pilot state: finished 
[2025-10-09 21:26:11] 2025-10-10 01:25:16,249 | INFO     | transexitcode: 0
[2025-10-09 21:26:11] 2025-10-10 01:25:16,249 | INFO     | exeerrorcode: 0
[2025-10-09 21:26:11] 2025-10-10 01:25:16,249 | INFO     | exeerrordiag: 
[2025-10-09 21:26:11] 2025-10-10 01:25:16,249 | INFO     | exitcode: 0
[2025-10-09 21:26:11] 2025-10-10 01:25:16,249 | INFO     | exitmsg: OK
[2025-10-09 21:26:11] 2025-10-10 01:25:16,249 | INFO     | cpuconsumptiontime: 47565 s
[2025-10-09 21:26:11] 2025-10-10 01:25:16,249 | INFO     | nevents: 400
[2025-10-09 21:26:11] 2025-10-10 01:25:16,249 | INFO     | neventsw: 0
[2025-10-09 21:26:11] 2025-10-10 01:25:16,249 | INFO     | pid: 521716
[2025-10-09 21:26:11] 2025-10-10 01:25:16,250 | INFO     | pgrp: 521716
[2025-10-09 21:26:11] 2025-10-10 01:25:16,250 | INFO     | corecount: 12
[2025-10-09 21:26:11] 2025-10-10 01:25:16,250 | INFO     | event service: False
[2025-10-09 21:26:11] 2025-10-10 01:25:16,250 | INFO     | sizes: {0: 2348684, 1: 2348883, 2: 2348911, 13: 2348911, 14: 2349229, 24: 2349257, 18133: 2381459, 18134: 2381458, 18144: 2390512, 18148: 2390568, 18189: 2390762}
[2025-10-09 21:26:11] 2025-10-10 01:25:16,250 | INFO     | --------------------------------------------------
[2025-10-09 21:26:11] 2025-10-10 01:25:16,250 | INFO     | 
[2025-10-09 21:26:11] 2025-10-10 01:25:16,250 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-09 21:26:11] 2025-10-10 01:25:16,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,282 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,282 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,282 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,292 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,292 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,292 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,292 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,292 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,292 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,292 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,293 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 21:26:11] 2025-10-10 01:25:16,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,293 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 21:26:11] 2025-10-10 01:25:16,293 | INFO     | job 6837337014 has completed (purged errors)
[2025-10-09 21:26:11] 2025-10-10 01:25:16,293 | INFO     | overall cleanup function is called
[2025-10-09 21:26:11] 2025-10-10 01:25:17,333 | INFO     | --- collectZombieJob: --- 10, [521716]
[2025-10-09 21:26:11] 2025-10-10 01:25:17,334 | INFO     | zombie collector waiting for pid 521716
[2025-10-09 21:26:11] 2025-10-10 01:25:17,337 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 21:26:11] 2025-10-10 01:25:17,337 | INFO     | collected zombie processes
[2025-10-09 21:26:11] 2025-10-10 01:25:17,337 | INFO     | will attempt to kill all subprocesses of pid=521716
[2025-10-09 21:26:11] 2025-10-10 01:25:18,224 | INFO     | process IDs to be killed: [521716] (in reverse order)
[2025-10-09 21:26:11] 2025-10-10 01:25:18,385 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 21:26:11] 2025-10-10 01:25:18,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 21:26:11] 2025-10-10 01:25:18,544 | INFO     | did not find any defunct processes belonging to 521716
[2025-10-09 21:26:11] 2025-10-10 01:25:18,610 | INFO     | did not find any defunct processes belonging to 521716
[2025-10-09 21:26:11] 2025-10-10 01:25:18,610 | INFO     | ready for new job
[2025-10-09 21:26:11] 2025-10-10 01:25:18,610 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 21:26:11] 2025-10-10 01:25:18,613 | INFO     | ***************************************
[2025-10-09 21:26:11] 2025-10-10 01:25:18,613 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 21:26:11] 2025-10-10 01:25:18,613 | INFO     | ***************************************
[2025-10-09 21:26:11] 2025-10-10 01:25:18,613 | INFO     | 
[2025-10-09 21:26:11] 2025-10-10 01:25:18,629 | INFO     | architecture information:
[2025-10-09 21:26:11] 2025-10-10 01:25:18,629 | INFO     | executing command: cat /etc/os-release
[2025-10-09 21:26:11] 2025-10-10 01:25:18,688 | INFO     | cat /etc/os-release:
[2025-10-09 21:26:11] NAME="CentOS Linux"
[2025-10-09 21:26:11] VERSION="7 (Core)"
[2025-10-09 21:26:11] ID="centos"
[2025-10-09 21:26:11] ID_LIKE="rhel fedora"
[2025-10-09 21:26:11] VERSION_ID="7"
[2025-10-09 21:26:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 21:26:11] ANSI_COLOR="0;31"
[2025-10-09 21:26:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 21:26:11] HOME_URL="https://www.centos.org/"
[2025-10-09 21:26:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 21:26:11] 
[2025-10-09 21:26:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 21:26:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 21:26:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 21:26:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 21:26:11] 
[2025-10-09 21:26:11] 2025-10-10 01:25:18,688 | INFO     | ***************************************
[2025-10-09 21:26:11] 2025-10-10 01:25:19,192 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-09 21:26:11] 2025-10-10 01:25:19,333 | INFO     | sufficient remaining disk space (75812044800 B)
[2025-10-09 21:26:11] 2025-10-10 01:25:19,333 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 21:26:11] 2025-10-10 01:25:19,333 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 21:26:11] 2025-10-10 01:25:19,333 | INFO     | update_server=False
[2025-10-09 21:26:11] 2025-10-10 01:25:19,333 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 21:26:11] 2025-10-10 01:25:19,553 | INFO     | all data control threads have been joined
[2025-10-09 21:26:11] 2025-10-10 01:25:19,792 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 21:26:11] 2025-10-10 01:25:19,793 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 21:26:11] 2025-10-10 01:25:19,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 21:26:11] 2025-10-10 01:25:19,794 | INFO     | will abort loop
[2025-10-09 21:26:11] 2025-10-10 01:25:20,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 21:26:11] 2025-10-10 01:25:20,197 | INFO     | all job control threads have been joined
[2025-10-09 21:26:11] 2025-10-10 01:25:20,349 | INFO     | [job] retrieve thread has finished
[2025-10-09 21:26:11] 2025-10-10 01:25:20,576 | INFO     | [data] control thread has finished
[2025-10-09 21:26:11] 2025-10-10 01:25:20,583 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 21:26:11] 2025-10-10 01:25:20,680 | INFO     | all payload control threads have been joined
[2025-10-09 21:26:11] 2025-10-10 01:25:20,724 | INFO     | [job] validate thread has finished
[2025-10-09 21:26:11] 2025-10-10 01:25:20,724 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 21:26:11] 2025-10-10 01:25:20,725 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 21:26:11] 2025-10-10 01:25:20,800 | INFO     | [job] job monitor thread has finished
[2025-10-09 21:26:11] 2025-10-10 01:25:20,991 | INFO     | [data] copytool_in thread has finished
[2025-10-09 21:26:11] 2025-10-10 01:25:21,033 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 21:26:11] 2025-10-10 01:25:21,183 | INFO     | [payload] failed_post thread has finished
[2025-10-09 21:26:11] 2025-10-10 01:25:21,203 | INFO     | [job] control thread has finished
[2025-10-09 21:26:11] 2025-10-10 01:25:21,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 21:26:11] 2025-10-10 01:25:21,683 | INFO     | [payload] validate_post thread has finished
[2025-10-09 21:26:11] 2025-10-10 01:25:21,687 | INFO     | [payload] control thread has finished
[2025-10-09 21:26:11] 2025-10-10 01:25:21,820 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 21:26:11] 2025-10-10 01:25:22,012 | INFO     | [data] copytool_out thread has finished
[2025-10-09 21:26:11] 2025-10-10 01:25:22,288 | INFO     | [job] queue monitor thread has finished
[2025-10-09 21:26:11] 2025-10-10 01:25:25,829 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 21:26:11] 2025-10-10 01:25:46,943 | INFO     | 18232s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-09 21:26:11] 2025-10-10 01:25:51,090 | INFO     | PID=514445 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 21:26:11] 2025-10-10 01:25:51,091 | INFO     | .. there are 39 such processes running
[2025-10-09 21:26:11] 2025-10-10 01:25:51,091 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 21:26:11] 2025-10-10 01:25:51,091 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 21:26:11] 2025-10-10 01:25:51,091 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 21:26:11] 2025-10-10 01:26:03,756 | INFO     | [monitor] cgroup control has ended
[2025-10-09 21:26:11] 2025-10-10 01:26:04,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140089554646848)>', '<ExcThread(monitor, started 140089040545536)>']
[2025-10-09 21:26:11] 2025-10-10 01:26:05,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 21:26:11] 2025-10-10 01:26:05,221 | INFO     | [monitor] control thread has ended
[2025-10-09 21:26:11] 2025-10-10 01:26:09,676 | INFO     | all workflow threads have been joined
[2025-10-09 21:26:11] 2025-10-10 01:26:09,677 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 21:26:11] 2025-10-10 01:26:09,677 | INFO     | traces error code: 0
[2025-10-09 21:26:11] 2025-10-10 01:26:09,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 21:26:11] 2025-10-10 01:26:10,590 [wrapper] ==== pilot stdout END ====
[2025-10-09 21:26:11] 2025-10-10 01:26:10,593 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 21:26:11] 2025-10-10 01:26:10,619 [wrapper] pilotpid: 514445
[2025-10-09 21:26:11] 2025-10-10 01:26:10,683 [wrapper] Pilot exit status: 0
[2025-10-09 21:26:11] 2025-10-10 01:26:10,824 [wrapper] pandaids: 6837337014
[2025-10-09 21:26:11] 2025-10-10 01:26:10,932 [wrapper] cleanup supervisor_pilot 1687425 514446
[2025-10-09 21:26:11] 2025-10-10 01:26:10,983 [wrapper] Test setup, not cleaning
[2025-10-09 21:26:11] 2025-10-10 01:26:11,037 [wrapper] apfmon messages muted
[2025-10-09 21:26:11] 2025-10-10 01:26:11,087 [wrapper] ==== wrapper stdout END ====
[2025-10-09 21:26:11] 2025-10-10 01:26:11,113 [wrapper] ==== wrapper stderr END ====
[2025-10-09 21:26:11]  *** Error codes and diagnostics ***
[2025-10-09 21:26:11]     "exeErrorCode": 0,
[2025-10-09 21:26:11]     "exeErrorDiag": "",
[2025-10-09 21:26:11]     "pilotErrorCode": 0,
[2025-10-09 21:26:11]     "pilotErrorDiag": "",
[2025-10-09 21:26:11]  *** Listing of results directory ***
[2025-10-09 21:26:11] total 412292
[2025-10-09 21:26:11] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 07:59 pilot3.tar.gz
[2025-10-09 21:26:11] -rwx------. 1 boincer umatlas     36292 Oct  9 08:08 runpilot2-wrapper.sh
[2025-10-09 21:26:11] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 08:08 queuedata.json
[2025-10-09 21:26:11] -rw-r--r--. 1 boincer umatlas       100 Oct  9 16:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 21:26:11] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 16:20 run_atlas
[2025-10-09 21:26:11] -rw-r--r--. 1 boincer umatlas       105 Oct  9 16:20 job.xml
[2025-10-09 21:26:11] -rw-r--r--. 2 boincer umatlas 223295175 Oct  9 16:20 EVNT.46676267._000694.pool.root.1
[2025-10-09 21:26:11] -rw-r--r--. 2 boincer umatlas    569678 Oct  9 16:20 input.tar.gz
[2025-10-09 21:26:11] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 16:20 start_atlas.sh
[2025-10-09 21:26:11] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 16:20 shared
[2025-10-09 21:26:11] -rw-r--r--. 1 boincer umatlas         0 Oct  9 16:20 boinc_lockfile
[2025-10-09 21:26:11] -rw-r--r--. 1 boincer umatlas      2549 Oct  9 16:20 pandaJob.out
[2025-10-09 21:26:11] -rw-------. 1 boincer umatlas    975454 Oct  9 16:21 agis_schedconf.cvmfs.json
[2025-10-09 21:26:11] drwx------. 5 boincer umatlas      4096 Oct  9 16:21 pilot3
[2025-10-09 21:26:11] -rw-r--r--. 1 boincer umatlas      6655 Oct  9 21:19 init_data.xml
[2025-10-09 21:26:11] -rw-------. 1 boincer umatlas 189479734 Oct  9 21:21 HITS.46676269._016824.pool.root.1
[2025-10-09 21:26:11] -rw-r--r--. 1 boincer umatlas       531 Oct  9 21:22 boinc_task_state.xml
[2025-10-09 21:26:11] -rw-------. 1 boincer umatlas      1044 Oct  9 21:24 memory_monitor_summary.json
[2025-10-09 21:26:11] -rw-------. 1 boincer umatlas   1560580 Oct  9 21:24 agis_ddmendpoints.agis.ALL.json
[2025-10-09 21:26:11] -rw-------. 1 boincer umatlas    572241 Oct  9 21:24 log.46676269._016824.job.log.tgz.1
[2025-10-09 21:26:11] -rw-------. 1 boincer umatlas        95 Oct  9 21:25 pilot_heartbeat.json
[2025-10-09 21:26:11] -rw-------. 1 boincer umatlas      7828 Oct  9 21:25 heartbeat.json
[2025-10-09 21:26:11] -rw-r--r--. 1 boincer umatlas        28 Oct  9 21:26 wrapper_checkpoint.txt
[2025-10-09 21:26:11] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 21:26 boinc_mmap_file
[2025-10-09 21:26:11] -rw-------. 1 boincer umatlas      5125 Oct  9 21:26 pilotlog.txt
[2025-10-09 21:26:11] -rw-------. 1 boincer umatlas   2179381 Oct  9 21:26 log.46676269._016824.job.log.1
[2025-10-09 21:26:11] -rw-------. 1 boincer umatlas       357 Oct  9 21:26 output.list
[2025-10-09 21:26:11] -rw-r--r--. 1 boincer umatlas       620 Oct  9 21:26 runtime_log
[2025-10-09 21:26:11] -rw-------. 1 boincer umatlas   2775040 Oct  9 21:26 result.tar.gz
[2025-10-09 21:26:11] -rw-r--r--. 1 boincer umatlas      8691 Oct  9 21:26 runtime_log.err
[2025-10-09 21:26:11] -rw-------. 1 boincer umatlas       654 Oct  9 21:26 gtyLDmWc4Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmkoNMDmstUxon.diag
[2025-10-09 21:26:11] -rw-r--r--. 1 boincer umatlas     21071 Oct  9 21:26 stderr.txt
[2025-10-09 21:26:11] HITS file was successfully produced:
[2025-10-09 21:26:11] -rw-------. 1 boincer umatlas 189479734 Oct  9 21:21 shared/HITS.pool.root.1
[2025-10-09 21:26:11]  *** Contents of shared directory: ***
[2025-10-09 21:26:11] total 406396
[2025-10-09 21:26:11] -rw-r--r--. 2 boincer umatlas 223295175 Oct  9 16:20 ATLAS.root_0
[2025-10-09 21:26:11] -rw-r--r--. 2 boincer umatlas    569678 Oct  9 16:20 input.tar.gz
[2025-10-09 21:26:11] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 16:20 start_atlas.sh
[2025-10-09 21:26:11] -rw-------. 1 boincer umatlas 189479734 Oct  9 21:21 HITS.pool.root.1
[2025-10-09 21:26:11] -rw-------. 1 boincer umatlas   2775040 Oct  9 21:26 result.tar.gz
21:26:13 (510401): run_atlas exited; CPU time 48107.563687
21:26:13 (510401): called boinc_finish(0)

</stderr_txt>
]]>

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