Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-09 19:23:09 (210596): vboxwrapper version 26210
2025-10-09 19:23:09 (210596): BOINC client version: 7.24.1
2025-10-09 19:23:09 (210596): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-10-09 19:23:09 (210596): Successfully copied 'init_data.xml' to the shared directory.
2025-10-09 19:23:09 (210596): Create VM. (boinc_2852cb8342456088, slot#1)
2025-10-09 19:23:09 (210596): Setting Memory Size for VM. (4800MB)
2025-10-09 19:23:09 (210596): Setting CPU Count for VM. (8)
2025-10-09 19:23:10 (210596): Setting Chipset Options for VM.
2025-10-09 19:23:10 (210596): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-09 19:23:10 (210596): Setting Boot Options for VM.
2025-10-09 19:23:10 (210596): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-09 19:23:10 (210596): Enabling VM Network Access.
2025-10-09 19:23:10 (210596): Disabling USB Support for VM.
2025-10-09 19:23:10 (210596): Disabling COM Port Support for VM.
2025-10-09 19:23:10 (210596): Disabling LPT Port Support for VM.
2025-10-09 19:23:10 (210596): Disabling Audio Support for VM.
2025-10-09 19:23:10 (210596): Disabling Clipboard Support for VM.
2025-10-09 19:23:10 (210596): Disabling Drag and Drop Support for VM.
2025-10-09 19:23:10 (210596): Adding storage controller(s) to VM.
2025-10-09 19:23:10 (210596): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-09 19:23:11 (210596): Adding VirtualBox Guest Additions to VM.
2025-10-09 19:23:11 (210596): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-09 19:23:11 (210596): forwarding host port 48855 to guest port 80
2025-10-09 19:23:11 (210596): Enabling remote desktop for VM.
2025-10-09 19:23:11 (210596): Enabling shared directory for VM.
2025-10-09 19:23:11 (210596): Starting VM using VBoxManage interface. (boinc_2852cb8342456088, slot#1)
2025-10-09 19:23:12 (210596): Successfully started VM. (PID = '211178')
2025-10-09 19:23:12 (210596): Reporting VM Process ID to BOINC.
2025-10-09 19:23:12 (210596): Guest Log: BIOS: VirtualBox 7.0.16
2025-10-09 19:23:12 (210596): Guest Log: CPUID EDX: 0x178bfbff
2025-10-09 19:23:12 (210596): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-09 19:23:12 (210596): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-09 19:23:12 (210596): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-09 19:23:12 (210596): Detected: Web Application Enabled (http://localhost:48855)
2025-10-09 19:23:12 (210596): Detected: Remote Desktop Enabled (localhost:55379)
2025-10-09 19:23:12 (210596): Preference change detected
2025-10-09 19:23:12 (210596): Setting CPU throttle for VM. (100%)
2025-10-09 19:23:12 (210596): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 19:23:14 (210596): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-09 19:23:14 (210596): Guest Log: BIOS: Booting from Hard Disk...
2025-10-09 19:23:16 (210596): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-09 19:23:16 (210596): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-09 19:23:16 (210596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-09 19:23:20 (210596): VM state change detected. (old = 'running', new = 'paused')
2025-10-09 19:23:41 (210596): VM state change detected. (old = 'paused', new = 'running')
2025-10-09 19:23:44 (210596): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-09 19:23:44 (210596): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-09 19:23:48 (210596): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-09 19:23:48 (210596): Guest Log: 00:00:00.000135 main     Log opened 2025-10-09T16:23:25.344554000Z
2025-10-09 19:23:48 (210596): Guest Log: 00:00:00.000240 main     OS Product: Linux
2025-10-09 19:23:48 (210596): Guest Log: 00:00:00.000299 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-09 19:23:48 (210596): Guest Log: 00:00:00.000324 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-09 19:23:48 (210596): Guest Log: 00:00:00.000345 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-09 19:23:48 (210596): Guest Log: 00:00:00.000346 main     Process ID: 1369
2025-10-09 19:23:48 (210596): Guest Log: 00:00:00.000346 main     Package type: LINUX_64BITS_GENERIC
2025-10-09 19:23:48 (210596): Guest Log: 00:00:00.001159 main     5.2.32 r132073 started. Verbose level = 0
2025-10-09 19:23:48 (210596): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-09 19:23:48 (210596): Guest Log: [INFO] Mounting shared directory
2025-10-09 19:23:48 (210596): Guest Log: [INFO] Checking for init_data.xml
2025-10-09 19:23:52 (210596): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-09 19:23:52 (210596): Guest Log: [INFO] Detected branch: prod
2025-10-09 19:23:52 (210596): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-09 19:23:52 (210596): Guest Log: Copying input files
2025-10-09 19:23:54 (210596): Guest Log: Copied input files into RunAtlas.
2025-10-09 19:23:54 (210596): Guest Log: Detected user-configured HTTP proxy at http://proxy.kippola.kiulu10clients.net:3128 - will set in /etc/cvmfs/default.local
2025-10-09 19:24:01 (210596): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-09 19:24:01 (210596): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-09 19:24:01 (210596): Guest Log: 2.6.3.0 1647 0 29608 151513 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.123.108:3128 1
2025-10-09 19:24:02 (210596): Guest Log: copied the webapp to /var/www
2025-10-09 19:24:02 (210596): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-09 19:24:02 (210596): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-09 19:24:02 (210596): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-09 19:24:02 (210596): Guest Log:  *** Starting ATLAS job. (PandaID=6837332763 taskID=46676269) ***
2025-10-09 19:33:11 (210596): VM state change detected. (old = 'running', new = 'paused')
2025-10-09 19:33:32 (210596): VM state change detected. (old = 'paused', new = 'running')
2025-10-09 20:09:36 (210596): VM state change detected. (old = 'running', new = 'paused')
2025-10-09 20:09:56 (210596): VM state change detected. (old = 'paused', new = 'running')
2025-10-09 20:19:17 (210596): VM state change detected. (old = 'running', new = 'paused')
2025-10-09 20:19:37 (210596): VM state change detected. (old = 'paused', new = 'running')
2025-10-09 20:35:38 (210596): Guest Log:  *** Job finished ***
2025-10-09 20:35:38 (210596): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:22,383 | INFO     | end of generic workflow (traces error code: 0)
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:22,383 | INFO     | traces error code: 0
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:22,383 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,737 | INFO     | PID=6056 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,737 | INFO     | found 0 job(s) in 20 queues
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,737 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,737 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,737 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,737 | CRITICAL | thread 'MainThread' is not alive
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,737 | INFO     | [monitor] control thread has ended
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,795 [wrapper] ==== pilot stdout END ====
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,799 [wrapper] ==== wrapper stdout RESUME ====
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,802 [wrapper] pilotpid: 6056
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,806 [wrapper] Pilot exit status: 0
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,856 [wrapper] pandaids: 6837332763
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,881 [wrapper] cleanup supervisor_pilot 29629 6057
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,885 [wrapper] Test setup, not cleaning
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,889 [wrapper] apfmon messages muted
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,893 [wrapper] ==== wrapper stdout END ====
2025-10-09 20:35:38 (210596): Guest Log: 2025-10-09 17:35:33,896 [wrapper] ==== wrapper stderr END ====
2025-10-09 20:35:38 (210596): Guest Log:  *** Error codes and diagnostics ***
2025-10-09 20:35:38 (210596): Guest Log:     "exeErrorCode": 0,
2025-10-09 20:35:38 (210596): Guest Log:     "exeErrorDiag": "",
2025-10-09 20:35:38 (210596): Guest Log:     "pilotErrorCode": 0,
2025-10-09 20:35:38 (210596): Guest Log:     "pilotErrorDiag": "",
2025-10-09 20:35:38 (210596): Guest Log:  *** Listing of results directory ***
2025-10-09 20:35:38 (210596): Guest Log: total 188328
2025-10-09 20:35:38 (210596): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  9 11:10 pilot3.tar.gz
2025-10-09 20:35:38 (210596): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  9 11:16 queuedata.json
2025-10-09 20:35:38 (210596): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  9 11:17 runpilot2-wrapper.sh
2025-10-09 20:35:38 (210596): Guest Log: -rw-r--r--. 1 atlas atlas      6944 Oct  9 16:23 init_data.xml
2025-10-09 20:35:38 (210596): Guest Log: -rw-r--r--. 1 atlas atlas    569682 Oct  9 16:23 input.tar.gz
2025-10-09 20:35:38 (210596): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct  9 16:23 start_atlas.sh
2025-10-09 20:35:38 (210596): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  9 16:23 EVNT.46676267._000633.pool.root.1 -> /data/./ATLAS.root_0
2025-10-09 20:35:38 (210596): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct  9 16:23 pandaJob.out
2025-10-09 20:35:38 (210596): Guest Log: -rw-------. 1 atlas atlas    975462 Oct  9 16:24 agis_schedconf.cvmfs.json
2025-10-09 20:35:38 (210596): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  9 16:24 agis_ddmendpoints.agis.ALL.json
2025-10-09 20:35:38 (210596): Guest Log: drwx------. 5 atlas atlas      4096 Oct  9 16:24 pilot3
2025-10-09 20:35:38 (210596): Guest Log: -rw-------. 1 atlas atlas 187216440 Oct  9 17:34 HITS.46676269._015385.pool.root.1
2025-10-09 20:35:38 (210596): Guest Log: -rw-------. 1 atlas atlas        95 Oct  9 17:34 pilot_heartbeat.json
2025-10-09 20:35:38 (210596): Guest Log: -rw-------. 1 atlas atlas      1030 Oct  9 17:34 memory_monitor_summary.json
2025-10-09 20:35:38 (210596): Guest Log: -rw-------. 1 atlas atlas    312073 Oct  9 17:34 log.46676269._015385.job.log.tgz.1
2025-10-09 20:35:38 (210596): Guest Log: -rw-------. 1 atlas atlas      7817 Oct  9 17:35 heartbeat.json
2025-10-09 20:35:38 (210596): Guest Log: -rw-------. 1 atlas atlas       814 Oct  9 17:35 pilotlog.txt
2025-10-09 20:35:38 (210596): Guest Log: -rw-------. 1 atlas atlas    593329 Oct  9 17:35 log.46676269._015385.job.log.1
2025-10-09 20:35:38 (210596): Guest Log: -rw-------. 1 atlas atlas       357 Oct  9 17:35 output.list
2025-10-09 20:35:38 (210596): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  9 17:35 runtime_log
2025-10-09 20:35:38 (210596): Guest Log: -rw-------. 1 atlas atlas    921600 Oct  9 17:35 result.tar.gz
2025-10-09 20:35:38 (210596): Guest Log: -rw-r--r--. 1 atlas atlas      8615 Oct  9 17:35 runtime_log.err
2025-10-09 20:35:38 (210596): Guest Log: -rw-------. 1 atlas atlas       645 Oct  9 17:35 RjIMDmTp3Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgUZNDmcZhJQo.diag
2025-10-09 20:35:38 (210596): Guest Log: Looking for outputfile HITS.46676269._015385.pool.root.1
2025-10-09 20:35:38 (210596): Guest Log: HITS file was successfully produced
2025-10-09 20:35:38 (210596): Guest Log: -rw-------. 1 atlas atlas 187216440 Oct  9 17:34 /home/atlas/RunAtlas/HITS.46676269._015385.pool.root.1
2025-10-09 20:35:38 (210596): Guest Log: Successfully finished the ATLAS job!
2025-10-09 20:35:38 (210596): Guest Log: Copying the results back to the shared directory!
2025-10-09 20:35:38 (210596): Guest Log:  *** Contents of shared directory: ***
2025-10-09 20:35:38 (210596): Guest Log: total 216917
2025-10-09 20:35:38 (210596): Guest Log: -rw-r--r--. 1 root root 221397739 Oct  9 16:23 ATLAS.root_0
2025-10-09 20:35:38 (210596): Guest Log: -rw-r--r--. 1 root root      6944 Oct  9 16:23 init_data.xml
2025-10-09 20:35:38 (210596): Guest Log: -rw-r--r--. 1 root root    569682 Oct  9 16:23 input.tar.gz
2025-10-09 20:35:38 (210596): Guest Log: -rw-r--r--. 1 root root    921600 Oct  9  2025 result.tar.gz
2025-10-09 20:35:38 (210596): Guest Log: -rw-r--r--. 1 root root     15120 Oct  9 16:23 start_atlas.sh
2025-10-09 20:35:38 (210596): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-09 20:35:38 (210596): VM Completion File Detected.
2025-10-09 20:35:38 (210596): Powering off VM.
2025-10-09 20:35:38 (210596): Successfully stopped VM.
2025-10-09 20:35:38 (210596): Deregistering VM. (boinc_2852cb8342456088, slot#1)
2025-10-09 20:35:38 (210596): Removing network bandwidth throttle group from VM.
2025-10-09 20:35:38 (210596): Removing VM from VirtualBox.
2025-10-09 20:35:43 (210596): called boinc_finish(0)

</stderr_txt>
]]>

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