Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:36:27 (2096586): wrapper (7.7.26015): starting
13:36:27 (2096586): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 13:36:27] Arguments: --nthreads 8
[2025-10-09 13:36:27] Threads: 8
[2025-10-09 13:36:27] Checking for CVMFS
[2025-10-09 13:36:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 13:36:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 13:36:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 13:36:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 13:36:28] 2.13.2.0 981271 125251 257296 151518 3 17 29798387 32935936 20525 16776704 0 93450596 99.680 74058848 29828 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 13:36:28] CVMFS is ok
[2025-10-09 13:36:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 13:36:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 13:36:28] Further information can be found at the LHC@home message board.
[2025-10-09 13:36:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 13:36:28] Checking for apptainer binary...
[2025-10-09 13:36:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 13:36:28] Running /usr/bin/apptainer --version
[2025-10-09 13:36:28] apptainer version 1.4.3-1.el9
[2025-10-09 13:36:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 13:36:28] c-4-36.aglt2.org
[2025-10-09 13:36:28] apptainer works
[2025-10-09 13:36:28] Set ATHENA_PROC_NUMBER=8
[2025-10-09 13:36:28] Set ATHENA_CORE_NUMBER=8
[2025-10-09 13:36:28] Starting ATLAS job with PandaID=6837334463
[2025-10-09 13:36:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 18:12:03]  *** The last 200 lines of the pilot log: ***
[2025-10-09 18:12:03] 2025-10-09 22:11:03,782 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-09 18:12:03] 2025-10-09 22:11:03,862 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1698499999984
[2025-10-09 18:12:03] 2025-10-09 22:11:03,973 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6837334463/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 18:12:03] 2025-10-09 22:11:03,973 | INFO     | extracted standard info from prmon json
[2025-10-09 18:12:03] 2025-10-09 22:11:03,974 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 18:12:03] 2025-10-09 22:11:03,974 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 18:12:03] 2025-10-09 22:11:03,976 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 18:12:03] 2025-10-09 22:11:03,976 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 18:12:03] 2025-10-09 22:11:03,985 | INFO     | fitting pss+swap vs Time
[2025-10-09 18:12:03] 2025-10-09 22:11:03,990 | INFO     | sum of square deviations: 5902482142.816438
[2025-10-09 18:12:03] 2025-10-09 22:11:03,993 | INFO     | sum of deviations: 62112693994.82024
[2025-10-09 18:12:03] 2025-10-09 22:11:03,993 | INFO     | mean x: 1760039662.0262172
[2025-10-09 18:12:03] 2025-10-09 22:11:03,993 | INFO     | mean y: 2108842.1685393257
[2025-10-09 18:12:03] 2025-10-09 22:11:03,993 | INFO     | -- intersect: -18519049257.26411
[2025-10-09 18:12:03] 2025-10-09 22:11:03,993 | INFO     | intersect: -18519049257.26411
[2025-10-09 18:12:03] 2025-10-09 22:11:03,994 | INFO     | chi2: 3.3352567017774994
[2025-10-09 18:12:03] 2025-10-09 22:11:03,998 | INFO     | sum of square deviations: 5577008489.465653
[2025-10-09 18:12:03] 2025-10-09 22:11:04,000 | INFO     | sum of deviations: 75254507523.29001
[2025-10-09 18:12:03] 2025-10-09 22:11:04,001 | INFO     | mean x: 1760039509.5114503
[2025-10-09 18:12:03] 2025-10-09 22:11:04,001 | INFO     | mean y: 2114901.736641221
[2025-10-09 18:12:03] 2025-10-09 22:11:04,001 | INFO     | -- intersect: -23747339086.006443
[2025-10-09 18:12:03] 2025-10-09 22:11:04,001 | INFO     | intersect: -23747339086.006443
[2025-10-09 18:12:03] 2025-10-09 22:11:04,001 | INFO     | chi2: 2.6761922428990235
[2025-10-09 18:12:03] 2025-10-09 22:11:04,002 | INFO     | current chi2=2.6761922428990235 (change=19.760531731402644 %)
[2025-10-09 18:12:03] 2025-10-09 22:11:04,006 | INFO     | right removable region: 261
[2025-10-09 18:12:03] 2025-10-09 22:11:04,006 | INFO     | sum of square deviations: 5576987814.950345
[2025-10-09 18:12:03] 2025-10-09 22:11:04,008 | INFO     | sum of deviations: 11747414882.087782
[2025-10-09 18:12:03] 2025-10-09 22:11:04,009 | INFO     | mean x: 1760039814.5458016
[2025-10-09 18:12:03] 2025-10-09 22:11:04,009 | INFO     | mean y: 2132336.034351145
[2025-10-09 18:12:03] 2025-10-09 22:11:04,009 | INFO     | -- intersect: -3705230598.314548
[2025-10-09 18:12:03] 2025-10-09 22:11:04,009 | INFO     | intersect: -3705230598.314548
[2025-10-09 18:12:03] 2025-10-09 22:11:04,009 | INFO     | chi2: 1.2316706593238336
[2025-10-09 18:12:03] 2025-10-09 22:11:04,011 | INFO     | current chi2=1.2316706593238336 (change=63.07118853348157 %)
[2025-10-09 18:12:03] 2025-10-09 22:11:04,011 | INFO     | sum of square deviations: 5263711362.124503
[2025-10-09 18:12:03] 2025-10-09 22:11:04,013 | INFO     | sum of deviations: 912823558.2101269
[2025-10-09 18:12:03] 2025-10-09 22:11:04,017 | INFO     | mean x: 1760039967.0583658
[2025-10-09 18:12:03] 2025-10-09 22:11:04,017 | INFO     | mean y: 2137566.7859922177
[2025-10-09 18:12:03] 2025-10-09 22:11:04,017 | INFO     | -- intersect: -303085465.9362665
[2025-10-09 18:12:03] 2025-10-09 22:11:04,017 | INFO     | intersect: -303085465.9362665
[2025-10-09 18:12:03] 2025-10-09 22:11:04,018 | INFO     | chi2: 1.1044677316013023
[2025-10-09 18:12:03] 2025-10-09 22:11:04,018 | INFO     | current chi2=1.1044677316013023 (change=10.327673778667712 %)
[2025-10-09 18:12:03] 2025-10-09 22:11:04,018 | INFO     | left removable region: 20
[2025-10-09 18:12:03] 2025-10-09 22:11:04,018 | INFO     | sum of square deviations: 4340510746.663915
[2025-10-09 18:12:03] 2025-10-09 22:11:04,025 | INFO     | sum of deviations: 30340984274.116177
[2025-10-09 18:12:03] 2025-10-09 22:11:04,025 | INFO     | mean x: 1760040089.0373445
[2025-10-09 18:12:03] 2025-10-09 22:11:04,025 | INFO     | mean y: 2135451.4315352696
[2025-10-09 18:12:03] 2025-10-09 22:11:04,025 | INFO     | -- intersect: -12300874903.822163
[2025-10-09 18:12:03] 2025-10-09 22:11:04,025 | INFO     | intersect: -12300874903.822163
[2025-10-09 18:12:03] 2025-10-09 22:11:04,026 | INFO     | chi2: 0.25553955140493284
[2025-10-09 18:12:03] 2025-10-09 22:11:04,026 | INFO     | -- intersect: -12300874903.822163
[2025-10-09 18:12:03] 2025-10-09 22:11:04,026 | INFO     | current memory leak: 6.99 B/s (using 241 data points, chi2=0.26)
[2025-10-09 18:12:03] 2025-10-09 22:11:04,027 | INFO     | could have reported an average CPU frequency of 2600 MHz (12 samples)
[2025-10-09 18:12:03] 2025-10-09 22:11:04,027 | INFO     | ..............................
[2025-10-09 18:12:03] 2025-10-09 22:11:04,027 | INFO     | . Timing measurements:
[2025-10-09 18:12:03] 2025-10-09 22:11:04,027 | INFO     | . get job = 0 s
[2025-10-09 18:12:03] 2025-10-09 22:11:04,027 | INFO     | . initial setup = 6 s
[2025-10-09 18:12:03] 2025-10-09 22:11:04,027 | INFO     | . payload setup = 29 s
[2025-10-09 18:12:03] 2025-10-09 22:11:04,028 | INFO     | . stage-in = 0 s
[2025-10-09 18:12:03] 2025-10-09 22:11:04,028 | INFO     | . payload execution = 16284 s
[2025-10-09 18:12:03] 2025-10-09 22:11:04,028 | INFO     | . stage-out = 6 s
[2025-10-09 18:12:03] 2025-10-09 22:11:04,028 | INFO     | . log creation = 0 s
[2025-10-09 18:12:03] 2025-10-09 22:11:04,028 | INFO     | ..............................
[2025-10-09 18:12:03] 2025-10-09 22:11:04,264 | INFO     | 
[2025-10-09 18:12:03] 2025-10-09 22:11:04,264 | INFO     | job summary report
[2025-10-09 18:12:03] 2025-10-09 22:11:04,264 | INFO     | --------------------------------------------------
[2025-10-09 18:12:03] 2025-10-09 22:11:04,264 | INFO     | PanDA job id: 6837334463
[2025-10-09 18:12:03] 2025-10-09 22:11:04,264 | INFO     | task id: 46676269
[2025-10-09 18:12:03] 2025-10-09 22:11:04,265 | INFO     | errors: (none)
[2025-10-09 18:12:03] 2025-10-09 22:11:04,265 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 18:12:03] 2025-10-09 22:11:04,265 | INFO     | pilot state: finished 
[2025-10-09 18:12:03] 2025-10-09 22:11:04,265 | INFO     | transexitcode: 0
[2025-10-09 18:12:03] 2025-10-09 22:11:04,265 | INFO     | exeerrorcode: 0
[2025-10-09 18:12:03] 2025-10-09 22:11:04,265 | INFO     | exeerrordiag: 
[2025-10-09 18:12:03] 2025-10-09 22:11:04,265 | INFO     | exitcode: 0
[2025-10-09 18:12:03] 2025-10-09 22:11:04,270 | INFO     | exitmsg: OK
[2025-10-09 18:12:03] 2025-10-09 22:11:04,270 | INFO     | cpuconsumptiontime: 48727 s
[2025-10-09 18:12:03] 2025-10-09 22:11:04,270 | INFO     | nevents: 400
[2025-10-09 18:12:03] 2025-10-09 22:11:04,270 | INFO     | neventsw: 0
[2025-10-09 18:12:03] 2025-10-09 22:11:04,270 | INFO     | pid: 2108917
[2025-10-09 18:12:03] 2025-10-09 22:11:04,271 | INFO     | pgrp: 2108917
[2025-10-09 18:12:03] 2025-10-09 22:11:04,271 | INFO     | corecount: 8
[2025-10-09 18:12:03] 2025-10-09 22:11:04,271 | INFO     | event service: False
[2025-10-09 18:12:03] 2025-10-09 22:11:04,271 | INFO     | sizes: {0: 2348683, 1: 2348882, 13: 2348882, 21: 2349200, 24: 2349228, 16318: 2380462, 16319: 2380589, 16327: 2389643, 16331: 2389699, 16369: 2389893}
[2025-10-09 18:12:03] 2025-10-09 22:11:04,271 | INFO     | --------------------------------------------------
[2025-10-09 18:12:03] 2025-10-09 22:11:04,271 | INFO     | 
[2025-10-09 18:12:03] 2025-10-09 22:11:04,271 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-09 18:12:03] 2025-10-09 22:11:04,426 | INFO     | time since job start (16420s) is within the limit (172800.0s)
[2025-10-09 18:12:03] 2025-10-09 22:11:04,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,663 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,663 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,663 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,665 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 18:12:03] 2025-10-09 22:11:04,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,665 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 18:12:03] 2025-10-09 22:11:04,665 | INFO     | job 6837334463 has completed (purged errors)
[2025-10-09 18:12:03] 2025-10-09 22:11:04,665 | INFO     | overall cleanup function is called
[2025-10-09 18:12:03] 2025-10-09 22:11:05,759 | INFO     | --- collectZombieJob: --- 10, [2108917]
[2025-10-09 18:12:03] 2025-10-09 22:11:05,759 | INFO     | zombie collector waiting for pid 2108917
[2025-10-09 18:12:03] 2025-10-09 22:11:05,759 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 18:12:03] 2025-10-09 22:11:05,759 | INFO     | collected zombie processes
[2025-10-09 18:12:03] 2025-10-09 22:11:05,759 | INFO     | will attempt to kill all subprocesses of pid=2108917
[2025-10-09 18:12:03] 2025-10-09 22:11:06,664 | INFO     | process IDs to be killed: [2108917] (in reverse order)
[2025-10-09 18:12:03] 2025-10-09 22:11:06,830 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 18:12:03] 2025-10-09 22:11:06,831 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 18:12:03] 2025-10-09 22:11:06,866 | INFO     | did not find any defunct processes belonging to 2108917
[2025-10-09 18:12:03] 2025-10-09 22:11:06,889 | INFO     | did not find any defunct processes belonging to 2108917
[2025-10-09 18:12:03] 2025-10-09 22:11:06,889 | INFO     | ready for new job
[2025-10-09 18:12:03] 2025-10-09 22:11:06,889 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 18:12:03] 2025-10-09 22:11:06,915 | INFO     | ***************************************
[2025-10-09 18:12:03] 2025-10-09 22:11:06,915 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 18:12:03] 2025-10-09 22:11:06,915 | INFO     | ***************************************
[2025-10-09 18:12:03] 2025-10-09 22:11:06,915 | INFO     | 
[2025-10-09 18:12:03] 2025-10-09 22:11:06,938 | INFO     | architecture information:
[2025-10-09 18:12:03] 2025-10-09 22:11:06,958 | INFO     | executing command: cat /etc/os-release
[2025-10-09 18:12:03] 2025-10-09 22:11:07,143 | INFO     | cat /etc/os-release:
[2025-10-09 18:12:03] NAME="CentOS Linux"
[2025-10-09 18:12:03] VERSION="7 (Core)"
[2025-10-09 18:12:03] ID="centos"
[2025-10-09 18:12:03] ID_LIKE="rhel fedora"
[2025-10-09 18:12:03] VERSION_ID="7"
[2025-10-09 18:12:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 18:12:03] ANSI_COLOR="0;31"
[2025-10-09 18:12:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 18:12:03] HOME_URL="https://www.centos.org/"
[2025-10-09 18:12:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 18:12:03] 
[2025-10-09 18:12:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 18:12:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 18:12:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 18:12:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 18:12:03] 
[2025-10-09 18:12:03] 2025-10-09 22:11:07,143 | INFO     | ***************************************
[2025-10-09 18:12:03] 2025-10-09 22:11:07,646 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-09 18:12:03] 2025-10-09 22:11:07,692 | INFO     | sufficient remaining disk space (75801559040 B)
[2025-10-09 18:12:03] 2025-10-09 22:11:07,693 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 18:12:03] 2025-10-09 22:11:07,693 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 18:12:03] 2025-10-09 22:11:07,693 | INFO     | update_server=False
[2025-10-09 18:12:03] 2025-10-09 22:11:07,693 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 18:12:03] 2025-10-09 22:11:07,749 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 18:12:03] 2025-10-09 22:11:07,749 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 18:12:03] 2025-10-09 22:11:07,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 18:12:03] 2025-10-09 22:11:07,749 | INFO     | will abort loop
[2025-10-09 18:12:03] 2025-10-09 22:11:08,048 | INFO     | all payload control threads have been joined
[2025-10-09 18:12:03] 2025-10-09 22:11:08,440 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 18:12:03] 2025-10-09 22:11:08,444 | INFO     | all data control threads have been joined
[2025-10-09 18:12:03] 2025-10-09 22:11:08,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 18:12:03] 2025-10-09 22:11:08,705 | INFO     | [job] retrieve thread has finished
[2025-10-09 18:12:03] 2025-10-09 22:11:08,755 | INFO     | [job] job monitor thread has finished
[2025-10-09 18:12:03] 2025-10-09 22:11:08,770 | INFO     | all job control threads have been joined
[2025-10-09 18:12:03] 2025-10-09 22:11:09,054 | INFO     | [payload] control thread has finished
[2025-10-09 18:12:03] 2025-10-09 22:11:09,332 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 18:12:03] 2025-10-09 22:11:09,400 | INFO     | [payload] failed_post thread has finished
[2025-10-09 18:12:03] 2025-10-09 22:11:09,460 | INFO     | [data] control thread has finished
[2025-10-09 18:12:03] 2025-10-09 22:11:09,776 | INFO     | [job] control thread has finished
[2025-10-09 18:12:03] 2025-10-09 22:11:09,840 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 18:12:03] 2025-10-09 22:11:09,844 | INFO     | [data] copytool_in thread has finished
[2025-10-09 18:12:03] 2025-10-09 22:11:09,872 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 18:12:03] 2025-10-09 22:11:09,877 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 18:12:03] 2025-10-09 22:11:09,886 | INFO     | [job] validate thread has finished
[2025-10-09 18:12:03] 2025-10-09 22:11:09,904 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 18:12:03] 2025-10-09 22:11:09,962 | INFO     | [payload] validate_post thread has finished
[2025-10-09 18:12:03] 2025-10-09 22:11:10,339 | INFO     | [job] queue monitor thread has finished
[2025-10-09 18:12:03] 2025-10-09 22:11:10,466 | INFO     | [data] copytool_out thread has finished
[2025-10-09 18:12:03] 2025-10-09 22:11:12,646 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 18:12:03] 2025-10-09 22:11:38,713 | INFO     | PID=2101078 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 18:12:03] 2025-10-09 22:11:38,714 | INFO     | .. there are 34 such processes running
[2025-10-09 18:12:03] 2025-10-09 22:11:38,715 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 18:12:03] 2025-10-09 22:11:38,715 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 18:12:03] 2025-10-09 22:11:38,715 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 18:12:03] 2025-10-09 22:11:54,485 | INFO     | [monitor] cgroup control has ended
[2025-10-09 18:12:03] 2025-10-09 22:11:56,398 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140128361109312)>', '<ExcThread(monitor, started 140127586211584)>']
[2025-10-09 18:12:03] 2025-10-09 22:11:56,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 18:12:03] 2025-10-09 22:11:56,941 | INFO     | [monitor] control thread has ended
[2025-10-09 18:12:03] 2025-10-09 22:12:01,445 | INFO     | all workflow threads have been joined
[2025-10-09 18:12:03] 2025-10-09 22:12:01,445 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 18:12:03] 2025-10-09 22:12:01,445 | INFO     | traces error code: 0
[2025-10-09 18:12:03] 2025-10-09 22:12:01,446 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 18:12:03] 2025-10-09 22:12:02,322 [wrapper] ==== pilot stdout END ====
[2025-10-09 18:12:03] 2025-10-09 22:12:02,420 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 18:12:03] 2025-10-09 22:12:02,451 [wrapper] pilotpid: 2101078
[2025-10-09 18:12:03] 2025-10-09 22:12:02,477 [wrapper] Pilot exit status: 0
[2025-10-09 18:12:03] 2025-10-09 22:12:02,653 [wrapper] pandaids: 6837334463
[2025-10-09 18:12:03] 2025-10-09 22:12:02,914 [wrapper] cleanup supervisor_pilot 2866018 2101079
[2025-10-09 18:12:03] 2025-10-09 22:12:02,919 [wrapper] Test setup, not cleaning
[2025-10-09 18:12:03] 2025-10-09 22:12:02,925 [wrapper] apfmon messages muted
[2025-10-09 18:12:03] 2025-10-09 22:12:02,930 [wrapper] ==== wrapper stdout END ====
[2025-10-09 18:12:03] 2025-10-09 22:12:02,933 [wrapper] ==== wrapper stderr END ====
[2025-10-09 18:12:03]  *** Error codes and diagnostics ***
[2025-10-09 18:12:03]     "exeErrorCode": 0,
[2025-10-09 18:12:03]     "exeErrorDiag": "",
[2025-10-09 18:12:03]     "pilotErrorCode": 0,
[2025-10-09 18:12:03]     "pilotErrorDiag": "",
[2025-10-09 18:12:03]  *** Listing of results directory ***
[2025-10-09 18:12:03] total 414212
[2025-10-09 18:12:03] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 07:26 pilot3.tar.gz
[2025-10-09 18:12:03] -rwx------. 1 boincer umatlas     36292 Oct  9 07:48 runpilot2-wrapper.sh
[2025-10-09 18:12:03] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 07:48 queuedata.json
[2025-10-09 18:12:03] -rw-r--r--. 1 boincer umatlas       100 Oct  9 13:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 18:12:03] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 13:36 run_atlas
[2025-10-09 18:12:03] -rw-r--r--. 1 boincer umatlas       105 Oct  9 13:36 job.xml
[2025-10-09 18:12:03] -rw-r--r--. 2 boincer umatlas 219705709 Oct  9 13:36 EVNT.46676267._000671.pool.root.1
[2025-10-09 18:12:03] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 13:36 start_atlas.sh
[2025-10-09 18:12:03] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 13:36 shared
[2025-10-09 18:12:03] -rw-r--r--. 2 boincer umatlas    569674 Oct  9 13:36 input.tar.gz
[2025-10-09 18:12:03] -rw-r--r--. 1 boincer umatlas         0 Oct  9 13:36 boinc_lockfile
[2025-10-09 18:12:03] -rw-r--r--. 1 boincer umatlas      2548 Oct  9 13:36 pandaJob.out
[2025-10-09 18:12:03] -rw-------. 1 boincer umatlas    975446 Oct  9 13:37 agis_schedconf.cvmfs.json
[2025-10-09 18:12:03] drwx------. 5 boincer umatlas      4096 Oct  9 13:37 pilot3
[2025-10-09 18:12:03] -rw-------. 1 boincer umatlas 195664360 Oct  9 18:09 HITS.46676269._016299.pool.root.1
[2025-10-09 18:12:03] -rw-r--r--. 1 boincer umatlas       531 Oct  9 18:09 boinc_task_state.xml
[2025-10-09 18:12:03] -rw-------. 1 boincer umatlas      1055 Oct  9 18:10 memory_monitor_summary.json
[2025-10-09 18:12:03] -rw-------. 1 boincer umatlas   1560401 Oct  9 18:10 agis_ddmendpoints.agis.ALL.json
[2025-10-09 18:12:03] -rw-r--r--. 1 boincer umatlas      6658 Oct  9 18:10 init_data.xml
[2025-10-09 18:12:03] -rw-------. 1 boincer umatlas    487011 Oct  9 18:10 log.46676269._016299.job.log.tgz.1
[2025-10-09 18:12:03] -rw-------. 1 boincer umatlas      7827 Oct  9 18:11 heartbeat.json
[2025-10-09 18:12:03] -rw-------. 1 boincer umatlas        95 Oct  9 18:11 pilot_heartbeat.json
[2025-10-09 18:12:03] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 18:11 boinc_mmap_file
[2025-10-09 18:12:03] -rw-r--r--. 1 boincer umatlas        28 Oct  9 18:11 wrapper_checkpoint.txt
[2025-10-09 18:12:03] -rw-------. 1 boincer umatlas      5010 Oct  9 18:12 pilotlog.txt
[2025-10-09 18:12:03] -rw-------. 1 boincer umatlas   1956279 Oct  9 18:12 log.46676269._016299.job.log.1
[2025-10-09 18:12:03] -rw-------. 1 boincer umatlas       357 Oct  9 18:12 output.list
[2025-10-09 18:12:03] -rw-r--r--. 1 boincer umatlas       620 Oct  9 18:12 runtime_log
[2025-10-09 18:12:03] -rw-------. 1 boincer umatlas   2457600 Oct  9 18:12 result.tar.gz
[2025-10-09 18:12:03] -rw-r--r--. 1 boincer umatlas      8694 Oct  9 18:12 runtime_log.err
[2025-10-09 18:12:03] -rw-------. 1 boincer umatlas       656 Oct  9 18:12 NulNDmOJ4Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmenNMDmL7AOsm.diag
[2025-10-09 18:12:03] -rw-r--r--. 1 boincer umatlas     21216 Oct  9 18:12 stderr.txt
[2025-10-09 18:12:03] HITS file was successfully produced:
[2025-10-09 18:12:03] -rw-------. 1 boincer umatlas 195664360 Oct  9 18:09 shared/HITS.pool.root.1
[2025-10-09 18:12:03]  *** Contents of shared directory: ***
[2025-10-09 18:12:03] total 408624
[2025-10-09 18:12:03] -rw-r--r--. 2 boincer umatlas 219705709 Oct  9 13:36 ATLAS.root_0
[2025-10-09 18:12:03] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 13:36 start_atlas.sh
[2025-10-09 18:12:03] -rw-r--r--. 2 boincer umatlas    569674 Oct  9 13:36 input.tar.gz
[2025-10-09 18:12:03] -rw-------. 1 boincer umatlas 195664360 Oct  9 18:09 HITS.pool.root.1
[2025-10-09 18:12:03] -rw-------. 1 boincer umatlas   2457600 Oct  9 18:12 result.tar.gz
18:12:05 (2096586): run_atlas exited; CPU time 49264.235317
18:12:05 (2096586): called boinc_finish(0)

</stderr_txt>
]]>

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