Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:53:34 (2792388): wrapper (7.7.26015): starting
00:53:34 (2792388): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 00:53:34] Arguments: --nthreads 12
[2025-10-10 00:53:34] Threads: 12
[2025-10-10 00:53:34] Checking for CVMFS
[2025-10-10 00:53:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 00:53:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 00:53:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 00:53:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 00:53:37] 2.13.2.0 8715 25353 239772 151526 2 453 33812689 46080001 53056 130560 0 167411546 99.869 54989480 21434 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-10 00:53:37] CVMFS is ok
[2025-10-10 00:53:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 00:53:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 00:53:37] Further information can be found at the LHC@home message board.
[2025-10-10 00:53:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 00:53:37] Checking for apptainer binary...
[2025-10-10 00:53:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 00:53:37] Running /usr/bin/apptainer --version
[2025-10-10 00:53:37] apptainer version 1.4.2-1.el9
[2025-10-10 00:53:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 00:53:38] mff2104.farm.particle.cz
[2025-10-10 00:53:38] apptainer works
[2025-10-10 00:53:38] Set ATHENA_PROC_NUMBER=12
[2025-10-10 00:53:38] Set ATHENA_CORE_NUMBER=12
[2025-10-10 00:53:38] Starting ATLAS job with PandaID=6835800940
[2025-10-10 00:53:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 02:48:10]  *** The last 200 lines of the pilot log: ***
[2025-10-10 02:48:10] 2025-10-10 00:36:33,506 | INFO     | monitor loop #425: job 0:6835800940 is in state 'finished'
[2025-10-10 02:48:10] 2025-10-10 00:36:33,506 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 02:48:10] 2025-10-10 00:36:34,920 | INFO     | time since job start (6086s) is within the limit (172800.0s)
[2025-10-10 02:48:10] 2025-10-10 00:36:36,011 | INFO     | monitor loop #426: job 0:6835800940 is in state 'finished'
[2025-10-10 02:48:10] 2025-10-10 00:36:36,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 02:48:10] 2025-10-10 00:36:36,926 | INFO     | time since job start (6088s) is within the limit (172800.0s)
[2025-10-10 02:48:10] 2025-10-10 00:36:38,517 | INFO     | monitor loop #427: job 0:6835800940 is in state 'finished'
[2025-10-10 02:48:10] 2025-10-10 00:36:38,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 02:48:10] 2025-10-10 00:36:38,935 | INFO     | time since job start (6090s) is within the limit (172800.0s)
[2025-10-10 02:48:10] 2025-10-10 00:36:40,946 | INFO     | time since job start (6092s) is within the limit (172800.0s)
[2025-10-10 02:48:10] 2025-10-10 00:36:41,022 | INFO     | monitor loop #428: job 0:6835800940 is in state 'finished'
[2025-10-10 02:48:10] 2025-10-10 00:36:41,022 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 02:48:10] 2025-10-10 00:36:42,955 | INFO     | time since job start (6094s) is within the limit (172800.0s)
[2025-10-10 02:48:10] 2025-10-10 00:36:43,529 | INFO     | monitor loop #429: job 0:6835800940 is in state 'finished'
[2025-10-10 02:48:10] 2025-10-10 00:36:43,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 02:48:10] 2025-10-10 00:36:44,964 | INFO     | time since job start (6096s) is within the limit (172800.0s)
[2025-10-10 02:48:10] 2025-10-10 00:36:46,036 | INFO     | monitor loop #430: job 0:6835800940 is in state 'finished'
[2025-10-10 02:48:10] 2025-10-10 00:36:46,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 02:48:10] 2025-10-10 00:36:46,974 | INFO     | time since job start (6098s) is within the limit (172800.0s)
[2025-10-10 02:48:10] 2025-10-10 00:36:48,542 | INFO     | monitor loop #431: job 0:6835800940 is in state 'finished'
[2025-10-10 02:48:10] 2025-10-10 00:36:48,542 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 02:48:10] 2025-10-10 00:36:48,989 | INFO     | time since job start (6100s) is within the limit (172800.0s)
[2025-10-10 02:48:10] 2025-10-10 00:36:50,997 | INFO     | time since job start (6102s) is within the limit (172800.0s)
[2025-10-10 02:48:10] 2025-10-10 00:36:51,053 | INFO     | monitor loop #432: job 0:6835800940 is in state 'finished'
[2025-10-10 02:48:10] 2025-10-10 00:36:51,053 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 02:48:10] 2025-10-10 00:36:53,220 | INFO     | PID=2807675 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 02:48:10] 2025-10-10 00:36:53,220 | INFO     | .. there are 86 such processes running
[2025-10-10 02:48:10] 2025-10-10 00:36:53,564 | INFO     | monitor loop #433: job 0:6835800940 is in state 'finished'
[2025-10-10 02:48:10] 2025-10-10 00:36:53,564 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 02:48:10] 2025-10-10 00:36:54,221 | INFO     | time since job start (6106s) is within the limit (172800.0s)
[2025-10-10 02:48:10] 2025-10-10 00:36:56,073 | INFO     | monitor loop #434: job 0:6835800940 is in state 'finished'
[2025-10-10 02:48:10] 2025-10-10 00:36:56,073 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 02:48:10] 2025-10-10 00:36:56,232 | INFO     | time since job start (6108s) is within the limit (172800.0s)
[2025-10-10 02:48:10] 2025-10-10 00:36:56,543 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 02:48:10] 2025-10-10 00:36:56,580 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2808.961687500001
[2025-10-10 02:48:10] 2025-10-10 00:36:56,618 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6835800940/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 02:48:10] 2025-10-10 00:36:56,619 | INFO     | extracted standard info from prmon json
[2025-10-10 02:48:10] 2025-10-10 00:36:56,619 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 02:48:10] 2025-10-10 00:36:56,619 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 02:48:10] 2025-10-10 00:36:56,619 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 02:48:10] 2025-10-10 00:36:56,620 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 02:48:10] 2025-10-10 00:36:56,622 | INFO     | fitting pss+swap vs Time
[2025-10-10 02:48:10] 2025-10-10 00:36:56,622 | INFO     | sum of square deviations: 226032972.32222202
[2025-10-10 02:48:10] 2025-10-10 00:36:56,625 | INFO     | sum of deviations: 4202599377.833335
[2025-10-10 02:48:10] 2025-10-10 00:36:56,626 | INFO     | mean x: 1760053726.5444446
[2025-10-10 02:48:10] 2025-10-10 00:36:56,626 | INFO     | mean y: 2657469.1666666665
[2025-10-10 02:48:10] 2025-10-10 00:36:56,626 | INFO     | -- intersect: -32721774812.26346
[2025-10-10 02:48:10] 2025-10-10 00:36:56,626 | INFO     | intersect: -32721774812.26346
[2025-10-10 02:48:10] 2025-10-10 00:36:56,626 | INFO     | chi2: 0.16450547913569052
[2025-10-10 02:48:10] 2025-10-10 00:36:56,626 | INFO     | -- intersect: -32721774812.26346
[2025-10-10 02:48:10] 2025-10-10 00:36:56,626 | INFO     | current memory leak: 18.59 B/s (using 90 data points, chi2=0.16)
[2025-10-10 02:48:10] 2025-10-10 00:36:56,627 | INFO     | could have reported an average CPU frequency of 2822 MHz (7 samples)
[2025-10-10 02:48:10] 2025-10-10 00:36:56,627 | INFO     | ..............................
[2025-10-10 02:48:10] 2025-10-10 00:36:56,627 | INFO     | . Timing measurements:
[2025-10-10 02:48:10] 2025-10-10 00:36:56,627 | INFO     | . get job = 0 s
[2025-10-10 02:48:10] 2025-10-10 00:36:56,627 | INFO     | . initial setup = 4 s
[2025-10-10 02:48:10] 2025-10-10 00:36:56,627 | INFO     | . payload setup = 56 s
[2025-10-10 02:48:10] 2025-10-10 00:36:56,627 | INFO     | . stage-in = 0 s
[2025-10-10 02:48:10] 2025-10-10 00:36:56,627 | INFO     | . payload execution = 5902 s
[2025-10-10 02:48:10] 2025-10-10 00:36:56,628 | INFO     | . stage-out = 2 s
[2025-10-10 02:48:10] 2025-10-10 00:36:56,628 | INFO     | . log creation = 0 s
[2025-10-10 02:48:10] 2025-10-10 00:36:56,628 | INFO     | ..............................
[2025-10-10 02:48:10] 2025-10-10 00:36:56,787 | INFO     | 
[2025-10-10 02:48:10] 2025-10-10 00:36:56,787 | INFO     | job summary report
[2025-10-10 02:48:10] 2025-10-10 00:36:56,787 | INFO     | --------------------------------------------------
[2025-10-10 02:48:10] 2025-10-10 00:36:56,787 | INFO     | PanDA job id: 6835800940
[2025-10-10 02:48:10] 2025-10-10 00:36:56,787 | INFO     | task id: 46676269
[2025-10-10 02:48:10] 2025-10-10 00:36:56,787 | INFO     | errors: (none)
[2025-10-10 02:48:10] 2025-10-10 00:36:56,787 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 02:48:10] 2025-10-10 00:36:56,787 | INFO     | pilot state: finished 
[2025-10-10 02:48:10] 2025-10-10 00:36:56,788 | INFO     | transexitcode: 0
[2025-10-10 02:48:10] 2025-10-10 00:36:56,788 | INFO     | exeerrorcode: 0
[2025-10-10 02:48:10] 2025-10-10 00:36:56,788 | INFO     | exeerrordiag: 
[2025-10-10 02:48:10] 2025-10-10 00:36:56,788 | INFO     | exitcode: 0
[2025-10-10 02:48:10] 2025-10-10 00:36:56,788 | INFO     | exitmsg: OK
[2025-10-10 02:48:10] 2025-10-10 00:36:56,788 | INFO     | cpuconsumptiontime: 38813 s
[2025-10-10 02:48:10] 2025-10-10 00:36:56,788 | INFO     | nevents: 400
[2025-10-10 02:48:10] 2025-10-10 00:36:56,788 | INFO     | neventsw: 0
[2025-10-10 02:48:10] 2025-10-10 00:36:56,788 | INFO     | pid: 2851868
[2025-10-10 02:48:10] 2025-10-10 00:36:56,788 | INFO     | pgrp: 2851868
[2025-10-10 02:48:10] 2025-10-10 00:36:56,788 | INFO     | corecount: 12
[2025-10-10 02:48:10] 2025-10-10 00:36:56,788 | INFO     | event service: False
[2025-10-10 02:48:10] 2025-10-10 00:36:56,789 | INFO     | sizes: {0: 2348680, 1: 2348879, 12: 2348879, 23: 2348907, 34: 2348935, 45: 2349353, 55: 2349381, 5962: 2376229, 5965: 2385229, 5967: 2385285, 6010: 2385479}
[2025-10-10 02:48:10] 2025-10-10 00:36:56,789 | INFO     | --------------------------------------------------
[2025-10-10 02:48:10] 2025-10-10 00:36:56,789 | INFO     | 
[2025-10-10 02:48:10] 2025-10-10 00:36:56,789 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-10-10 02:48:10] 2025-10-10 00:36:57,062 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,062 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,062 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,062 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,062 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,062 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,063 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,063 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,063 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,063 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,063 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,063 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,063 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,063 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,063 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,063 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,063 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,064 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 02:48:10] 2025-10-10 00:36:57,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,064 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 02:48:10] 2025-10-10 00:36:57,064 | INFO     | job 6835800940 has completed (purged errors)
[2025-10-10 02:48:10] 2025-10-10 00:36:57,064 | INFO     | overall cleanup function is called
[2025-10-10 02:48:10] 2025-10-10 00:36:58,079 | INFO     | --- collectZombieJob: --- 10, [2851868]
[2025-10-10 02:48:10] 2025-10-10 00:36:58,079 | INFO     | zombie collector waiting for pid 2851868
[2025-10-10 02:48:10] 2025-10-10 00:36:58,080 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 02:48:10] 2025-10-10 00:36:58,080 | INFO     | collected zombie processes
[2025-10-10 02:48:10] 2025-10-10 00:36:58,080 | INFO     | will attempt to kill all subprocesses of pid=2851868
[2025-10-10 02:48:10] 2025-10-10 00:36:59,321 | INFO     | process IDs to be killed: [2851868] (in reverse order)
[2025-10-10 02:48:10] 2025-10-10 00:37:00,131 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 02:48:10] 2025-10-10 00:37:00,131 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 02:48:10] 2025-10-10 00:37:00,194 | INFO     | did not find any defunct processes belonging to 2851868
[2025-10-10 02:48:10] 2025-10-10 00:37:00,263 | INFO     | did not find any defunct processes belonging to 2851868
[2025-10-10 02:48:10] 2025-10-10 00:37:00,263 | INFO     | ready for new job
[2025-10-10 02:48:10] 2025-10-10 00:37:00,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 02:48:10] 2025-10-10 00:37:00,265 | INFO     | ***************************************
[2025-10-10 02:48:10] 2025-10-10 00:37:00,271 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 02:48:10] 2025-10-10 00:37:00,271 | INFO     | ***************************************
[2025-10-10 02:48:10] 2025-10-10 00:37:00,271 | INFO     | 
[2025-10-10 02:48:10] 2025-10-10 00:37:00,286 | INFO     | architecture information:
[2025-10-10 02:48:10] 2025-10-10 00:37:00,299 | INFO     | executing command: cat /etc/os-release
[2025-10-10 02:48:10] 2025-10-10 00:37:00,435 | INFO     | cat /etc/os-release:
[2025-10-10 02:48:10] NAME="CentOS Linux"
[2025-10-10 02:48:10] VERSION="7 (Core)"
[2025-10-10 02:48:10] ID="centos"
[2025-10-10 02:48:10] ID_LIKE="rhel fedora"
[2025-10-10 02:48:10] VERSION_ID="7"
[2025-10-10 02:48:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 02:48:10] ANSI_COLOR="0;31"
[2025-10-10 02:48:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 02:48:10] HOME_URL="https://www.centos.org/"
[2025-10-10 02:48:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 02:48:10] 
[2025-10-10 02:48:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 02:48:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 02:48:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 02:48:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 02:48:10] 
[2025-10-10 02:48:10] 2025-10-10 00:37:00,436 | INFO     | ***************************************
[2025-10-10 02:48:10] 2025-10-10 00:37:00,942 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-10-10 02:48:10] 2025-10-10 00:37:01,071 | INFO     | sufficient remaining disk space (1530867482624 B)
[2025-10-10 02:48:10] 2025-10-10 00:37:01,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 02:48:10] 2025-10-10 00:37:01,071 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 02:48:10] 2025-10-10 00:37:01,071 | INFO     | update_server=False
[2025-10-10 02:48:10] 2025-10-10 00:37:01,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 02:48:10] 2025-10-10 00:37:01,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 02:48:10] 2025-10-10 00:37:01,076 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 02:48:10] 2025-10-10 00:37:01,092 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 02:48:10] 2025-10-10 00:37:01,093 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 02:48:10] 2025-10-10 00:37:01,093 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 02:48:10] 2025-10-10 00:37:01,093 | INFO     | will abort loop
[2025-10-10 02:48:10] 2025-10-10 00:37:01,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 02:48:10] 2025-10-10 00:37:01,844 | INFO     | all job control threads have been joined
[2025-10-10 02:48:10] 2025-10-10 00:37:02,037 | INFO     | all data control threads have been joined
[2025-10-10 02:48:10] 2025-10-10 00:37:02,081 | INFO     | [job] retrieve thread has finished
[2025-10-10 02:48:10] 2025-10-10 00:37:02,099 | INFO     | [job] job monitor thread has finished
[2025-10-10 02:48:10] 2025-10-10 00:37:02,104 | INFO     | all payload control threads have been joined
[2025-10-10 02:48:10] 2025-10-10 00:37:02,287 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 02:48:10] 2025-10-10 00:37:02,288 | INFO     | [job] validate thread has finished
[2025-10-10 02:48:10] 2025-10-10 00:37:02,616 | INFO     | [payload] failed_post thread has finished
[2025-10-10 02:48:10] 2025-10-10 00:37:02,813 | INFO     | [job] queue monitor thread has finished
[2025-10-10 02:48:10] 2025-10-10 00:37:02,851 | INFO     | [job] control thread has finished
[2025-10-10 02:48:10] 2025-10-10 00:37:02,887 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 02:48:10] 2025-10-10 00:37:03,020 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 02:48:10] 2025-10-10 00:37:03,044 | INFO     | [data] control thread has finished
[2025-10-10 02:48:10] 2025-10-10 00:37:03,083 | INFO     | [data] copytool_out thread has finished
[2025-10-10 02:48:10] 2025-10-10 00:37:03,110 | INFO     | [payload] control thread has finished
[2025-10-10 02:48:10] 2025-10-10 00:37:03,294 | INFO     | [data] copytool_in thread has finished
[2025-10-10 02:48:10] 2025-10-10 00:37:03,514 | INFO     | [payload] validate_post thread has finished
[2025-10-10 02:48:10] 2025-10-10 00:37:05,090 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 02:48:10] 2025-10-10 00:37:11,393 | INFO     | job.realtimelogging is not enabled
[2025-10-10 02:48:10] 2025-10-10 00:37:12,399 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 02:48:10] 2025-10-10 00:37:18,660 | INFO     | [monitor] cgroup control has ended
[2025-10-10 02:48:10] 2025-10-10 00:37:20,693 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140457915295552)>', '<ExcThread(monitor, started 140457392707328)>']
[2025-10-10 02:48:10] 2025-10-10 00:37:25,718 | INFO     | all workflow threads have been joined
[2025-10-10 02:48:10] 2025-10-10 00:37:25,718 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 02:48:10] 2025-10-10 00:37:25,718 | INFO     | traces error code: 0
[2025-10-10 02:48:10] 2025-10-10 00:37:25,719 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 02:48:10] 2025-10-10 00:37:30,570 | INFO     | PID=2807675 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 02:48:10] 2025-10-10 00:37:30,570 | INFO     | .. there are 86 such processes running
[2025-10-10 02:48:10] 2025-10-10 00:37:30,571 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 02:48:10] 2025-10-10 00:37:30,571 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 02:48:10] 2025-10-10 00:37:30,571 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 02:48:10] 2025-10-10 00:37:30,571 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 02:48:10] 2025-10-10 00:37:30,572 | INFO     | [monitor] control thread has ended
[2025-10-10 02:48:10] 2025-10-10 00:37:30,756 [wrapper] ==== pilot stdout END ====
[2025-10-10 02:48:10] 2025-10-10 00:37:30,796 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 02:48:10] 2025-10-10 00:37:30,861 [wrapper] pilotpid: 2807675
[2025-10-10 02:48:10] 2025-10-10 00:37:30,890 [wrapper] Pilot exit status: 0
[2025-10-10 02:48:10] 2025-10-10 00:37:31,058 [wrapper] pandaids: 6835800940
[2025-10-10 02:48:10] 2025-10-10 00:37:31,487 [wrapper] cleanup supervisor_pilot 3213499 2807676
[2025-10-10 02:48:10] 2025-10-10 00:37:31,516 [wrapper] Test setup, not cleaning
[2025-10-10 02:48:10] 2025-10-10 00:37:31,548 [wrapper] apfmon messages muted
[2025-10-10 02:48:10] 2025-10-10 00:37:31,594 [wrapper] ==== wrapper stdout END ====
[2025-10-10 02:48:10] 2025-10-10 00:37:31,629 [wrapper] ==== wrapper stderr END ====
[2025-10-10 02:48:10]  *** Error codes and diagnostics ***
[2025-10-10 02:48:10]     "exeErrorCode": 0,
[2025-10-10 02:48:10]     "exeErrorDiag": "",
[2025-10-10 02:48:10]     "pilotErrorCode": 0,
[2025-10-10 02:48:10]     "pilotErrorDiag": "",
[2025-10-10 02:48:10]  *** Listing of results directory ***
[2025-10-10 02:48:10] total 410280
[2025-10-10 02:48:10] -rw-r--r-- 1 boinc boinc    552446 Oct  8 08:43 pilot3.tar.gz
[2025-10-10 02:48:10] -rw-r--r-- 1 boinc boinc      5112 Oct  8 08:57 queuedata.json
[2025-10-10 02:48:10] -rwx------ 1 boinc boinc     36292 Oct  8 08:58 runpilot2-wrapper.sh
[2025-10-10 02:48:10] -rw-r--r-- 1 boinc boinc       100 Oct 10 00:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 02:48:10] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 00:53 run_atlas
[2025-10-10 02:48:10] -rw-r--r-- 1 boinc boinc       105 Oct 10 00:53 job.xml
[2025-10-10 02:48:10] -rw-r--r-- 1 boinc boinc      6665 Oct 10 00:53 init_data.xml
[2025-10-10 02:48:10] -rw-r--r-- 2 boinc boinc 220724969 Oct 10 00:53 EVNT.46676267._000049.pool.root.1
[2025-10-10 02:48:10] drwxrwx--x 2 boinc boinc      4096 Oct 10 00:53 shared
[2025-10-10 02:48:10] -rw-r--r-- 2 boinc boinc    565608 Oct 10 00:53 input.tar.gz
[2025-10-10 02:48:10] -rw-r--r-- 2 boinc boinc     15120 Oct 10 00:53 start_atlas.sh
[2025-10-10 02:48:10] -rw-r--r-- 1 boinc boinc         0 Oct 10 00:53 boinc_lockfile
[2025-10-10 02:48:10] -rw-r--r-- 1 boinc boinc      2547 Oct 10 00:53 pandaJob.out
[2025-10-10 02:48:10] -rw------- 1 boinc boinc    975454 Oct 10 00:55 agis_schedconf.cvmfs.json
[2025-10-10 02:48:10] -rw------- 1 boinc boinc   1560401 Oct 10 00:55 agis_ddmendpoints.agis.ALL.json
[2025-10-10 02:48:10] drwx------ 4 boinc boinc      4096 Oct 10 00:55 pilot3
[2025-10-10 02:48:10] -rw------- 1 boinc boinc 193072308 Oct 10 02:35 HITS.46676269._001207.pool.root.1
[2025-10-10 02:48:10] -rw-r--r-- 1 boinc boinc       529 Oct 10 02:35 boinc_task_state.xml
[2025-10-10 02:48:10] -rw------- 1 boinc boinc      1026 Oct 10 02:36 memory_monitor_summary.json
[2025-10-10 02:48:10] -rw------- 1 boinc boinc    394362 Oct 10 02:36 log.46676269._001207.job.log.tgz.1
[2025-10-10 02:48:10] -rw------- 1 boinc boinc      7780 Oct 10 02:36 heartbeat.json
[2025-10-10 02:48:10] -rw------- 1 boinc boinc        95 Oct 10 02:37 pilot_heartbeat.json
[2025-10-10 02:48:10] -rw------- 1 boinc boinc       823 Oct 10 02:37 pilotlog.txt
[2025-10-10 02:48:10] -rw------- 1 boinc boinc    827832 Oct 10 02:37 log.46676269._001207.job.log.1
[2025-10-10 02:48:10] -rw------- 1 boinc boinc       357 Oct 10 02:37 output.list
[2025-10-10 02:48:10] -rw-r--r-- 1 boinc boinc       620 Oct 10 02:37 runtime_log
[2025-10-10 02:48:10] -rw------- 1 boinc boinc   1239040 Oct 10 02:37 result.tar.gz
[2025-10-10 02:48:10] -rw-r--r-- 1 boinc boinc      8764 Oct 10 02:37 runtime_log.err
[2025-10-10 02:48:10] -rw------- 1 boinc boinc       663 Oct 10 02:37 lz7KDmmIdQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsUXNDm1LVYlm.diag
[2025-10-10 02:48:10] -rw-r--r-- 1 boinc boinc        26 Oct 10 02:48 wrapper_checkpoint.txt
[2025-10-10 02:48:10] -rw-r--r-- 1 boinc boinc      8192 Oct 10 02:48 boinc_mmap_file
[2025-10-10 02:48:10] -rw-r--r-- 1 boinc boinc     22344 Oct 10 02:48 stderr.txt
[2025-10-10 02:48:10] HITS file was successfully produced:
[2025-10-10 02:48:10] -rw------- 1 boinc boinc 193072308 Oct 10 02:35 shared/HITS.pool.root.1
[2025-10-10 02:48:10]  *** Contents of shared directory: ***
[2025-10-10 02:48:10] total 405892
[2025-10-10 02:48:10] -rw-r--r-- 2 boinc boinc 220724969 Oct 10 00:53 ATLAS.root_0
[2025-10-10 02:48:10] -rw-r--r-- 2 boinc boinc    565608 Oct 10 00:53 input.tar.gz
[2025-10-10 02:48:10] -rw-r--r-- 2 boinc boinc     15120 Oct 10 00:53 start_atlas.sh
[2025-10-10 02:48:10] -rw------- 1 boinc boinc 193072308 Oct 10 02:35 HITS.pool.root.1
[2025-10-10 02:48:10] -rw------- 1 boinc boinc   1239040 Oct 10 02:37 result.tar.gz
02:48:12 (2792388): run_atlas exited; CPU time 39126.915404
02:48:12 (2792388): called boinc_finish(0)

</stderr_txt>
]]>

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