Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
01:25:20 (3113118): wrapper (7.7.26015): starting
01:25:20 (3113118): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 01:25:20] Arguments: --nthreads 4
[2025-10-10 01:25:20] Threads: 4
[2025-10-10 01:25:20] Checking for CVMFS
[2025-10-10 01:25:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 01:25:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 01:25:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 01:25:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 01:25:21] 2.13.2.0 15963 40950 45628 151526 1 56 22356485 33554433 0 130560 3 19070555 99.990 1262272 300 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2025-10-10 01:25:21] CVMFS is ok
[2025-10-10 01:25:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 01:25:21] Checking for apptainer binary...
[2025-10-10 01:25:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 01:25:21] Running /usr/bin/apptainer --version
[2025-10-10 01:25:21] apptainer version 1.4.0
[2025-10-10 01:25:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 01:25:21] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2025-10-10 01:25:21] apptainer works
[2025-10-10 01:25:21] Set ATHENA_PROC_NUMBER=4
[2025-10-10 01:25:21] Set ATHENA_CORE_NUMBER=4
[2025-10-10 01:25:21] Starting ATLAS job with PandaID=6837328498
[2025-10-10 01:25:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 02:37:39]  *** The last 200 lines of the pilot log: ***
[2025-10-10 02:37:39]  is_altstaged=None
[2025-10-10 02:37:39]  is_tar=False
[2025-10-10 02:37:39]  lfn=log.46676269._013761.job.log.tgz.1
[2025-10-10 02:37:39]  mtime=0
[2025-10-10 02:37:39]  protocol_id=None
[2025-10-10 02:37:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 02:37:39]  replicas=None
[2025-10-10 02:37:39]  scope=mc23_13p6TeV
[2025-10-10 02:37:39]  status=None
[2025-10-10 02:37:39]  status_code=0
[2025-10-10 02:37:39]  storage_token=
[2025-10-10 02:37:39]  surl=/home/ek/BOINC/slots/0/PanDA_Pilot-6837328498/log.46676269._013761.job.log.tgz.1
[2025-10-10 02:37:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/94/log.46676269._013761.job.log.tgz.1
[2025-10-10 02:37:39]  workdir=None
[2025-10-10 02:37:39] ]
[2025-10-10 02:37:39] 2025-10-09 23:36:44,835 | INFO     | transferring file log.46676269._013761.job.log.tgz.1 from /home/ek/BOINC/slots/0/PanDA_Pilot-6837328498/log.46676269._013761.job.log.tgz.1 to /home/ek/BOINC/slots/
[2025-10-10 02:37:39] 2025-10-09 23:36:44,835 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/0/PanDA_Pilot-6837328498/log.46676269._013761.job.log.tgz.1 /home/ek/BOINC/slots/0/log.46676269._013761.job
[2025-10-10 02:37:39] 2025-10-09 23:36:44,844 | INFO     | adding to output.list: log.46676269._013761.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/94/log.46676269._013761.job.log.tg
[2025-10-10 02:37:39] 2025-10-09 23:36:44,844 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 02:37:39] 2025-10-09 23:36:44,844 | INFO     | summary of transferred files:
[2025-10-10 02:37:39] 2025-10-09 23:36:44,844 | INFO     |  -- lfn=log.46676269._013761.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 02:37:39] 2025-10-09 23:36:44,844 | INFO     | stage-out finished correctly
[2025-10-10 02:37:39] 2025-10-09 23:36:46,262 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 02:37:39] 2025-10-09 23:36:46,369 | INFO     | time since job start (4280s) is within the limit (172800.0s)
[2025-10-10 02:37:39] 2025-10-09 23:36:46,388 | INFO     | job 6837328498 has state=finished
[2025-10-10 02:37:39] 2025-10-09 23:36:46,388 | INFO     | preparing for final server update for job 6837328498 in state='finished'
[2025-10-10 02:37:39] 2025-10-09 23:36:46,389 | INFO     | this job has now completed (state=finished)
[2025-10-10 02:37:39] 2025-10-09 23:36:46,389 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 02:37:39] 2025-10-09 23:36:46,389 | INFO     | log transfer has been attempted: DONE
[2025-10-10 02:37:39] 2025-10-09 23:36:46,389 | INFO     | job 6837328498 has finished - writing final server update
[2025-10-10 02:37:39] 2025-10-09 23:36:46,389 | INFO     | total number of processed events: 400 (read)
[2025-10-10 02:37:39] 2025-10-09 23:36:46,389 | INFO     | executing command: lscpu
[2025-10-10 02:37:39] 2025-10-09 23:36:46,403 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 02:37:39] 2025-10-09 23:36:47,020 | INFO     | monitor loop #327: job 0:6837328498 is in state 'finished'
[2025-10-10 02:37:39] 2025-10-09 23:36:47,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 02:37:39] 2025-10-09 23:36:47,493 | INFO     | PID=3116917 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 02:37:39] 2025-10-09 23:36:48,494 | INFO     | time since job start (4282s) is within the limit (172800.0s)
[2025-10-10 02:37:39] 2025-10-09 23:36:48,570 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 02:37:39] 2025-10-09 23:36:48,571 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3585.9491666666668
[2025-10-10 02:37:39] 2025-10-09 23:36:48,573 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-6837328498/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 02:37:39] 2025-10-09 23:36:48,573 | INFO     | extracted standard info from prmon json
[2025-10-10 02:37:39] 2025-10-09 23:36:48,573 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 02:37:39] 2025-10-09 23:36:48,574 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 02:37:39] 2025-10-09 23:36:48,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 02:37:39] 2025-10-09 23:36:48,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 02:37:39] 2025-10-09 23:36:48,574 | INFO     | fitting pss+swap vs Time
[2025-10-10 02:37:39] 2025-10-09 23:36:48,574 | INFO     | sum of square deviations: 77515872.0
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | sum of deviations: -10050478523.0
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | mean x: 1760050940.0
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | mean y: 2658908.222222222
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | -- intersect: 228205654184.544
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | intersect: 228205654184.544
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | chi2: 0.1366466239517189
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | -- intersect: 228205654184.544
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | current memory leak: -129.66 B/s (using 63 data points, chi2=0.14)
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | could have reported an average CPU frequency of 3908 MHz (6 samples)
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | ..............................
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | . Timing measurements:
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | . get job = 0 s
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | . initial setup = 1 s
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | . payload setup = 2 s
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | . stage-in = 0 s
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | . payload execution = 4258 s
[2025-10-10 02:37:39] 2025-10-09 23:36:48,575 | INFO     | . stage-out = 0 s
[2025-10-10 02:37:39] 2025-10-09 23:36:48,576 | INFO     | . log creation = 0 s
[2025-10-10 02:37:39] 2025-10-09 23:36:48,576 | INFO     | ..............................
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | 
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | job summary report
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | --------------------------------------------------
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | PanDA job id: 6837328498
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | task id: 46676269
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | errors: (none)
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | pilot state: finished 
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | transexitcode: 0
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | exeerrorcode: 0
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | exeerrordiag: 
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | exitcode: 0
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | exitmsg: OK
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | cpuconsumptiontime: 15922 s
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | nevents: 400
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | neventsw: 0
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | pid: 3123624
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | pgrp: 3123624
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | corecount: 4
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | event service: False
[2025-10-10 02:37:39] 2025-10-09 23:36:48,685 | INFO     | sizes: {0: 2348628, 1: 2348883, 3: 2349145, 11: 2349173, 4264: 2375370, 4266: 2384368, 4267: 2384552, 4269: 2384746}
[2025-10-10 02:37:39] 2025-10-09 23:36:48,686 | INFO     | --------------------------------------------------
[2025-10-10 02:37:39] 2025-10-09 23:36:48,686 | INFO     | 
[2025-10-10 02:37:39] 2025-10-09 23:36:48,686 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 02:37:39] 2025-10-09 23:36:48,696 | INFO     | job 6837328498 has completed (purged errors)
[2025-10-10 02:37:39] 2025-10-09 23:36:48,697 | INFO     | overall cleanup function is called
[2025-10-10 02:37:39] 2025-10-09 23:36:49,703 | INFO     | --- collectZombieJob: --- 10, [3123624]
[2025-10-10 02:37:39] 2025-10-09 23:36:49,703 | INFO     | zombie collector waiting for pid 3123624
[2025-10-10 02:37:39] 2025-10-09 23:36:49,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 02:37:39] 2025-10-09 23:36:49,703 | INFO     | collected zombie processes
[2025-10-10 02:37:39] 2025-10-09 23:36:49,703 | INFO     | will attempt to kill all subprocesses of pid=3123624
[2025-10-10 02:37:39] 2025-10-09 23:36:49,804 | INFO     | process IDs to be killed: [3123624] (in reverse order)
[2025-10-10 02:37:39] 2025-10-09 23:36:49,839 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 02:37:39] 2025-10-09 23:36:49,839 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 02:37:39] 2025-10-09 23:36:49,842 | INFO     | did not find any defunct processes belonging to 3123624
[2025-10-10 02:37:39] 2025-10-09 23:36:49,846 | INFO     | did not find any defunct processes belonging to 3123624
[2025-10-10 02:37:39] 2025-10-09 23:36:49,846 | INFO     | ready for new job
[2025-10-10 02:37:39] 2025-10-09 23:36:49,846 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 02:37:39] 2025-10-09 23:36:49,847 | INFO     | ***************************************
[2025-10-10 02:37:39] 2025-10-09 23:36:49,847 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 02:37:39] 2025-10-09 23:36:49,847 | INFO     | ***************************************
[2025-10-10 02:37:39] 2025-10-09 23:36:49,847 | INFO     | 
[2025-10-10 02:37:39] 2025-10-09 23:36:49,847 | INFO     | architecture information:
[2025-10-10 02:37:39] 2025-10-09 23:36:49,848 | INFO     | executing command: cat /etc/os-release
[2025-10-10 02:37:39] 2025-10-09 23:36:49,854 | INFO     | cat /etc/os-release:
[2025-10-10 02:37:39] NAME="CentOS Linux"
[2025-10-10 02:37:39] VERSION="7 (Core)"
[2025-10-10 02:37:39] ID="centos"
[2025-10-10 02:37:39] ID_LIKE="rhel fedora"
[2025-10-10 02:37:39] VERSION_ID="7"
[2025-10-10 02:37:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 02:37:39] ANSI_COLOR="0;31"
[2025-10-10 02:37:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 02:37:39] HOME_URL="https://www.centos.org/"
[2025-10-10 02:37:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 02:37:39] 
[2025-10-10 02:37:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 02:37:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 02:37:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 02:37:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 02:37:39] 
[2025-10-10 02:37:39] 2025-10-09 23:36:49,854 | INFO     | ***************************************
[2025-10-10 02:37:39] 2025-10-09 23:36:50,357 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2025-10-10 02:37:39] 2025-10-09 23:36:50,364 | INFO     | sufficient remaining disk space (131147497472 B)
[2025-10-10 02:37:39] 2025-10-09 23:36:50,364 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 02:37:39] 2025-10-09 23:36:50,365 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 02:37:39] 2025-10-09 23:36:50,365 | INFO     | update_server=False
[2025-10-10 02:37:39] 2025-10-09 23:36:50,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 02:37:39] 2025-10-09 23:36:50,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 02:37:39] 2025-10-09 23:36:50,365 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-10 02:37:39] 2025-10-09 23:36:50,365 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 02:37:39] 2025-10-09 23:36:50,365 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 02:37:39] 2025-10-09 23:36:50,365 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 02:37:39] 2025-10-09 23:36:50,396 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 02:37:39] 2025-10-09 23:36:50,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 02:37:39] 2025-10-09 23:36:50,528 | INFO     | aborting loop
[2025-10-10 02:37:39] 2025-10-09 23:36:50,533 | INFO     | all data control threads have been joined
[2025-10-10 02:37:39] 2025-10-09 23:36:50,656 | INFO     | all payload control threads have been joined
[2025-10-10 02:37:39] 2025-10-09 23:36:51,317 | INFO     | all job control threads have been joined
[2025-10-10 02:37:39] 2025-10-09 23:36:51,370 | INFO     | [job] retrieve thread has finished
[2025-10-10 02:37:39] 2025-10-09 23:36:51,370 | INFO     | [job] queue monitor thread has finished
[2025-10-10 02:37:39] 2025-10-09 23:36:51,374 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 02:37:39] 2025-10-09 23:36:51,403 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 02:37:39] 2025-10-09 23:36:51,487 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 02:37:39] 2025-10-09 23:36:51,533 | INFO     | [job] job monitor thread has finished
[2025-10-10 02:37:39] 2025-10-09 23:36:51,538 | INFO     | [data] control thread has finished
[2025-10-10 02:37:39] 2025-10-09 23:36:51,661 | INFO     | [payload] control thread has finished
[2025-10-10 02:37:39] 2025-10-09 23:36:51,827 | INFO     | [data] copytool_in thread has finished
[2025-10-10 02:37:39] 2025-10-09 23:36:51,973 | INFO     | [payload] failed_post thread has finished
[2025-10-10 02:37:39] 2025-10-09 23:36:52,300 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 02:37:39] 2025-10-09 23:36:52,322 | INFO     | [job] control thread has finished
[2025-10-10 02:37:39] 2025-10-09 23:36:52,401 | INFO     | [data] copytool_out thread has finished
[2025-10-10 02:37:39] 2025-10-09 23:36:52,559 | INFO     | [payload] validate_post thread has finished
[2025-10-10 02:37:39] 2025-10-09 23:36:52,762 | INFO     | [job] validate thread has finished
[2025-10-10 02:37:39] 2025-10-09 23:36:52,819 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 02:37:39] 2025-10-09 23:36:56,306 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 02:37:39] 2025-10-09 23:37:32,663 | INFO     | [monitor] cgroup control has ended
[2025-10-10 02:37:39] 2025-10-09 23:37:34,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895066507072)>', '<ExcThread(monitor, started 139894575843072)>']
[2025-10-10 02:37:39] 2025-10-09 23:37:34,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 02:37:39] 2025-10-09 23:37:34,579 | INFO     | [monitor] control thread has ended
[2025-10-10 02:37:39] 2025-10-09 23:37:39,344 | INFO     | all workflow threads have been joined
[2025-10-10 02:37:39] 2025-10-09 23:37:39,344 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 02:37:39] 2025-10-09 23:37:39,344 | INFO     | traces error code: 0
[2025-10-10 02:37:39] 2025-10-09 23:37:39,344 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 02:37:39] 2025-10-09 23:37:39,409 [wrapper] ==== pilot stdout END ====
[2025-10-10 02:37:39] 2025-10-09 23:37:39,411 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 02:37:39] 2025-10-09 23:37:39,412 [wrapper] pilotpid: 3116917
[2025-10-10 02:37:39] 2025-10-09 23:37:39,413 [wrapper] Pilot exit status: 0
[2025-10-10 02:37:39] 2025-10-09 23:37:39,420 [wrapper] pandaids: 6837328498
[2025-10-10 02:37:39] 2025-10-09 23:37:39,443 [wrapper] cleanup supervisor_pilot 3175108 3116918
[2025-10-10 02:37:39] 2025-10-09 23:37:39,445 [wrapper] Test setup, not cleaning
[2025-10-10 02:37:39] 2025-10-09 23:37:39,446 [wrapper] apfmon messages muted
[2025-10-10 02:37:39] 2025-10-09 23:37:39,447 [wrapper] ==== wrapper stdout END ====
[2025-10-10 02:37:39] 2025-10-09 23:37:39,448 [wrapper] ==== wrapper stderr END ====
[2025-10-10 02:37:39]  *** Error codes and diagnostics ***
[2025-10-10 02:37:39]     "exeErrorCode": 0,
[2025-10-10 02:37:39]     "exeErrorDiag": "",
[2025-10-10 02:37:39]     "pilotErrorCode": 0,
[2025-10-10 02:37:39]     "pilotErrorDiag": "",
[2025-10-10 02:37:39]  *** Listing of results directory ***
[2025-10-10 02:37:39] total 415744
[2025-10-10 02:37:39] -rw-r--r-- 1 ek ek    557409 Oct  9 13:27 pilot3.tar.gz
[2025-10-10 02:37:39] -rwx------ 1 ek ek     36292 Oct  9 13:43 runpilot2-wrapper.sh
[2025-10-10 02:37:39] -rw-r--r-- 1 ek ek      5112 Oct  9 13:46 queuedata.json
[2025-10-10 02:37:39] -rw-rw-r-- 1 ek ek       100 Oct 10 01:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 02:37:39] -rwxr-xr-x 1 ek ek      7986 Oct 10 01:25 run_atlas
[2025-10-10 02:37:39] -rw-rw-r-- 1 ek ek       105 Oct 10 01:25 job.xml
[2025-10-10 02:37:39] -rw-r--r-- 2 ek ek 221573651 Oct 10 01:25 EVNT.46676267._000563.pool.root.1
[2025-10-10 02:37:39] drwxrwx--x 2 ek ek      4096 Oct 10 01:25 shared
[2025-10-10 02:37:39] -rw-r--r-- 2 ek ek    569681 Oct 10 01:25 input.tar.gz
[2025-10-10 02:37:39] -rw-r--r-- 2 ek ek     15120 Oct 10 01:25 start_atlas.sh
[2025-10-10 02:37:39] -rw-rw-r-- 1 ek ek         0 Oct 10 01:25 boinc_setup_complete
[2025-10-10 02:37:39] -rw-rw-r-- 1 ek ek      9843 Oct 10 01:25 init_data.xml
[2025-10-10 02:37:39] -rw-rw-r-- 1 ek ek         0 Oct 10 01:25 boinc_lockfile
[2025-10-10 02:37:39] -rw-rw-r-- 1 ek ek      2549 Oct 10 01:25 pandaJob.out
[2025-10-10 02:37:39] -rw------- 1 ek ek    975454 Oct 10 01:25 agis_schedconf.cvmfs.json
[2025-10-10 02:37:39] -rw------- 1 ek ek   1560401 Oct 10 01:25 agis_ddmendpoints.agis.ALL.json
[2025-10-10 02:37:39] drwx------ 5 ek ek      4096 Oct 10 01:25 pilot3
[2025-10-10 02:37:39] -rw------- 1 ek ek        95 Oct 10 02:36 pilot_heartbeat.json
[2025-10-10 02:37:39] -rw------- 1 ek ek 198451220 Oct 10 02:36 HITS.46676269._013761.pool.root.1
[2025-10-10 02:37:39] -rw------- 1 ek ek      1037 Oct 10 02:36 memory_monitor_summary.json
[2025-10-10 02:37:39] -rw------- 1 ek ek    261842 Oct 10 02:36 log.46676269._013761.job.log.tgz.1
[2025-10-10 02:37:39] -rw------- 1 ek ek      7791 Oct 10 02:36 heartbeat.json
[2025-10-10 02:37:39] -rw-rw-r-- 1 ek ek       529 Oct 10 02:36 boinc_task_state.xml
[2025-10-10 02:37:39] -rw-rw-r-- 1 ek ek      8192 Oct 10 02:37 boinc_mmap_file
[2025-10-10 02:37:39] -rw-rw-r-- 1 ek ek        27 Oct 10 02:37 wrapper_checkpoint.txt
[2025-10-10 02:37:39] -rw------- 1 ek ek      4553 Oct 10 02:37 pilotlog.txt
[2025-10-10 02:37:39] -rw------- 1 ek ek    634317 Oct 10 02:37 log.46676269._013761.job.log.1
[2025-10-10 02:37:39] -rw------- 1 ek ek       357 Oct 10 02:37 output.list
[2025-10-10 02:37:39] -rw-rw-r-- 1 ek ek       620 Oct 10 02:37 runtime_log
[2025-10-10 02:37:39] -rw------- 1 ek ek    911360 Oct 10 02:37 result.tar.gz
[2025-10-10 02:37:39] -rw-rw-r-- 1 ek ek      8898 Oct 10 02:37 runtime_log.err
[2025-10-10 02:37:39] -rw------- 1 ek ek       666 Oct 10 02:37 4LXNDmxI3Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDGZNDmhED7Tn.diag
[2025-10-10 02:37:39] -rw-rw-r-- 1 ek ek     21340 Oct 10 02:37 stderr.txt
[2025-10-10 02:37:39] HITS file was successfully produced:
[2025-10-10 02:37:39] -rw------- 1 ek ek 198451220 Oct 10 02:36 shared/HITS.pool.root.1
[2025-10-10 02:37:39]  *** Contents of shared directory: ***
[2025-10-10 02:37:39] total 411664
[2025-10-10 02:37:39] -rw-r--r-- 2 ek ek 221573651 Oct 10 01:25 ATLAS.root_0
[2025-10-10 02:37:39] -rw-r--r-- 2 ek ek    569681 Oct 10 01:25 input.tar.gz
[2025-10-10 02:37:39] -rw-r--r-- 2 ek ek     15120 Oct 10 01:25 start_atlas.sh
[2025-10-10 02:37:39] -rw------- 1 ek ek 198451220 Oct 10 02:36 HITS.pool.root.1
[2025-10-10 02:37:39] -rw------- 1 ek ek    911360 Oct 10 02:37 result.tar.gz
02:37:40 (3113118): run_atlas exited; CPU time 15957.240119
02:37:40 (3113118): called boinc_finish(0)

</stderr_txt>
]]>

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