Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-09 21:10:55 (129076): vboxwrapper version 26210
2025-10-09 21:10:55 (129076): BOINC client version: 7.24.1
2025-10-09 21:10:56 (129076): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2025-10-09 21:10:56 (129076): Successfully copied 'init_data.xml' to the shared directory.
2025-10-09 21:10:56 (129076): Create VM. (boinc_d2f08e082a4774cd, slot#1)
2025-10-09 21:10:56 (129076): Setting Memory Size for VM. (4800MB)
2025-10-09 21:10:56 (129076): Setting CPU Count for VM. (8)
2025-10-09 21:10:56 (129076): Setting Chipset Options for VM.
2025-10-09 21:10:56 (129076): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-09 21:10:56 (129076): Setting Boot Options for VM.
2025-10-09 21:10:56 (129076): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-09 21:10:56 (129076): Enabling VM Network Access.
2025-10-09 21:10:56 (129076): Disabling USB Support for VM.
2025-10-09 21:10:56 (129076): Disabling COM Port Support for VM.
2025-10-09 21:10:56 (129076): Disabling LPT Port Support for VM.
2025-10-09 21:10:56 (129076): Disabling Audio Support for VM.
2025-10-09 21:10:56 (129076): Disabling Clipboard Support for VM.
2025-10-09 21:10:57 (129076): Disabling Drag and Drop Support for VM.
2025-10-09 21:10:57 (129076): Adding storage controller(s) to VM.
2025-10-09 21:10:57 (129076): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-09 21:10:57 (129076): Adding VirtualBox Guest Additions to VM.
2025-10-09 21:10:57 (129076): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-09 21:10:57 (129076): forwarding host port 48129 to guest port 80
2025-10-09 21:10:57 (129076): Enabling remote desktop for VM.
2025-10-09 21:10:57 (129076): Enabling shared directory for VM.
2025-10-09 21:10:58 (129076): Starting VM using VBoxManage interface. (boinc_d2f08e082a4774cd, slot#1)
2025-10-09 21:10:59 (129076): Successfully started VM. (PID = '129751')
2025-10-09 21:10:59 (129076): Reporting VM Process ID to BOINC.
2025-10-09 21:10:59 (129076): Guest Log: BIOS: VirtualBox 7.1.12
2025-10-09 21:10:59 (129076): Guest Log: CPUID EDX: 0x178bfbff
2025-10-09 21:10:59 (129076): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-09 21:10:59 (129076): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-09 21:10:59 (129076): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-09 21:10:59 (129076): Detected: Web Application Enabled (http://localhost:48129)
2025-10-09 21:10:59 (129076): Detected: Remote Desktop Enabled (localhost:54893)
2025-10-09 21:10:59 (129076): Preference change detected
2025-10-09 21:10:59 (129076): Setting CPU throttle for VM. (90%)
2025-10-09 21:10:59 (129076): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 21:11:01 (129076): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-09 21:11:01 (129076): Guest Log: BIOS: Booting from Hard Disk...
2025-10-09 21:11:04 (129076): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-09 21:11:04 (129076): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-09 21:11:04 (129076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-09 21:11:10 (129076): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-09 21:11:10 (129076): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-09 21:11:14 (129076): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-09 21:11:14 (129076): Guest Log: 00:00:00.000173 main     Log opened 2025-10-09T19:11:11.955098000Z
2025-10-09 21:11:14 (129076): Guest Log: 00:00:00.000277 main     OS Product: Linux
2025-10-09 21:11:14 (129076): Guest Log: 00:00:00.000295 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-09 21:11:14 (129076): Guest Log: 00:00:00.000309 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-09 21:11:14 (129076): Guest Log: 00:00:00.000322 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-09 21:11:14 (129076): Guest Log: 00:00:00.000323 main     Process ID: 1377
2025-10-09 21:11:14 (129076): Guest Log: 00:00:00.000323 main     Package type: LINUX_64BITS_GENERIC
2025-10-09 21:11:14 (129076): Guest Log: 00:00:00.000861 main     5.2.32 r132073 started. Verbose level = 0
2025-10-09 21:11:14 (129076): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-09 21:11:14 (129076): Guest Log: [INFO] Mounting shared directory
2025-10-09 21:11:14 (129076): Guest Log: [INFO] Checking for init_data.xml
2025-10-09 21:11:57 (129076): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-09 21:11:57 (129076): Guest Log: [INFO] Detected branch: prod
2025-10-09 21:11:57 (129076): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-09 21:11:57 (129076): Guest Log: Copying input files
2025-10-09 21:11:58 (129076): Guest Log: Copied input files into RunAtlas.
2025-10-09 21:11:58 (129076): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-09 21:11:58 (129076): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-09 21:11:58 (129076): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-09 21:11:58 (129076): Guest Log: Further information can be found at the LHC@home message board.
2025-10-09 21:12:06 (129076): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-09 21:12:06 (129076): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-09 21:12:06 (129076): Guest Log: 2.6.3.0 1662 0 32080 151520 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-09 21:12:07 (129076): Guest Log: copied the webapp to /var/www
2025-10-09 21:12:07 (129076): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-09 21:12:07 (129076): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-09 21:12:07 (129076): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-09 21:12:07 (129076): Guest Log:  *** Starting ATLAS job. (PandaID=6837329391 taskID=46676269) ***
2025-10-09 21:31:11 (129076): VM state change detected. (old = 'running', new = 'paused')
2025-10-09 21:31:31 (129076): VM state change detected. (old = 'paused', new = 'running')
2025-10-09 21:47:54 (129076): VM state change detected. (old = 'running', new = 'paused')
2025-10-09 21:48:14 (129076): VM state change detected. (old = 'paused', new = 'running')
2025-10-09 22:50:42 (129076): Status Report: Elapsed Time: '6000.000000'
2025-10-09 22:50:42 (129076): Status Report: CPU Time: '23153.670000'
2025-10-09 22:52:07 (129076): Guest Log:  *** Job finished ***
2025-10-09 22:52:07 (129076): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:04,758 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:04,758 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:19,095 | INFO     | [monitor] cgroup control has ended
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:21,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664344000320)>', '<ExcThread(monitor, started 139663478093568)>']
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:21,905 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:21,905 | INFO     | [monitor] control thread has ended
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:26,111 | INFO     | all workflow threads have been joined
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:26,112 | INFO     | end of generic workflow (traces error code: 0)
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:26,112 | INFO     | traces error code: 0
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:26,112 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:26,160 [wrapper] ==== pilot stdout END ====
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:26,163 [wrapper] ==== wrapper stdout RESUME ====
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:26,166 [wrapper] pilotpid: 6231
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:26,169 [wrapper] Pilot exit status: 0
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:27,100 [wrapper] pandaids: 6837329391
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:27,124 [wrapper] cleanup supervisor_pilot  3081 6232
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:27,128 [wrapper] Test setup, not cleaning
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:27,130 [wrapper] apfmon messages muted
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:27,133 [wrapper] ==== wrapper stdout END ====
2025-10-09 22:52:07 (129076): Guest Log: 2025-10-09 20:51:27,136 [wrapper] ==== wrapper stderr END ====
2025-10-09 22:52:07 (129076): Guest Log:  *** Error codes and diagnostics ***
2025-10-09 22:52:07 (129076): Guest Log:     "exeErrorCode": 0,
2025-10-09 22:52:07 (129076): Guest Log:     "exeErrorDiag": "",
2025-10-09 22:52:07 (129076): Guest Log:     "pilotErrorCode": 0,
2025-10-09 22:52:07 (129076): Guest Log:     "pilotErrorDiag": "",
2025-10-09 22:52:07 (129076): Guest Log:  *** Listing of results directory ***
2025-10-09 22:52:07 (129076): Guest Log: total 192936
2025-10-09 22:52:07 (129076): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  9 10:51 queuedata.json
2025-10-09 22:52:07 (129076): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  9 10:52 pilot3.tar.gz
2025-10-09 22:52:07 (129076): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  9 10:55 runpilot2-wrapper.sh
2025-10-09 22:52:07 (129076): Guest Log: -rw-r--r--. 1 atlas atlas    569681 Oct  9 19:11 input.tar.gz
2025-10-09 22:52:07 (129076): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct  9 19:11 start_atlas.sh
2025-10-09 22:52:07 (129076): Guest Log: -rw-r--r--. 1 atlas atlas      9668 Oct  9 19:11 init_data.xml
2025-10-09 22:52:07 (129076): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  9 19:11 EVNT.46676267._000588.pool.root.1 -> /data/./ATLAS.root_0
2025-10-09 22:52:07 (129076): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct  9 19:12 pandaJob.out
2025-10-09 22:52:07 (129076): Guest Log: -rw-------. 1 atlas atlas    975454 Oct  9 19:22 agis_schedconf.cvmfs.json
2025-10-09 22:52:07 (129076): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  9 19:22 agis_ddmendpoints.agis.ALL.json
2025-10-09 22:52:07 (129076): Guest Log: drwx------. 5 atlas atlas      4096 Oct  9 19:23 pilot3
2025-10-09 22:52:07 (129076): Guest Log: -rw-------. 1 atlas atlas 191639609 Oct  9 20:49 HITS.46676269._014329.pool.root.1
2025-10-09 22:52:07 (129076): Guest Log: -rw-------. 1 atlas atlas      1026 Oct  9 20:50 memory_monitor_summary.json
2025-10-09 22:52:07 (129076): Guest Log: -rw-------. 1 atlas atlas    316660 Oct  9 20:50 log.46676269._014329.job.log.tgz.1
2025-10-09 22:52:07 (129076): Guest Log: -rw-------. 1 atlas atlas      7762 Oct  9 20:50 heartbeat.json
2025-10-09 22:52:07 (129076): Guest Log: -rw-------. 1 atlas atlas        95 Oct  9 20:51 pilot_heartbeat.json
2025-10-09 22:52:07 (129076): Guest Log: -rw-------. 1 atlas atlas      4877 Oct  9 20:51 pilotlog.txt
2025-10-09 22:52:07 (129076): Guest Log: -rw-------. 1 atlas atlas    730523 Oct  9 20:51 log.46676269._014329.job.log.1
2025-10-09 22:52:07 (129076): Guest Log: -rw-------. 1 atlas atlas       357 Oct  9 20:51 output.list
2025-10-09 22:52:07 (129076): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  9 20:51 runtime_log
2025-10-09 22:52:07 (129076): Guest Log: -rw-------. 1 atlas atlas   1064960 Oct  9 20:51 result.tar.gz
2025-10-09 22:52:07 (129076): Guest Log: -rw-r--r--. 1 atlas atlas      8698 Oct  9 20:51 runtime_log.err
2025-10-09 22:52:07 (129076): Guest Log: -rw-------. 1 atlas atlas       675 Oct  9 20:51 dUBLDmpT3Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmrbNMDm5JZP8n.diag
2025-10-09 22:52:07 (129076): Guest Log: Looking for outputfile HITS.46676269._014329.pool.root.1
2025-10-09 22:52:07 (129076): Guest Log: HITS file was successfully produced
2025-10-09 22:52:07 (129076): Guest Log: -rw-------. 1 atlas atlas 191639609 Oct  9 20:49 /home/atlas/RunAtlas/HITS.46676269._014329.pool.root.1
2025-10-09 22:52:07 (129076): Guest Log: Successfully finished the ATLAS job!
2025-10-09 22:52:07 (129076): Guest Log: Copying the results back to the shared directory!
2025-10-09 22:52:07 (129076): Guest Log:  *** Contents of shared directory: ***
2025-10-09 22:52:07 (129076): Guest Log: total 215848
2025-10-09 22:52:07 (129076): Guest Log: -rw-r--r--. 1 root root 219354442 Oct  9 19:10 ATLAS.root_0
2025-10-09 22:52:07 (129076): Guest Log: -rw-r--r--. 1 root root      9668 Oct  9 19:10 init_data.xml
2025-10-09 22:52:07 (129076): Guest Log: -rw-r--r--. 1 root root    569681 Oct  9 19:10 input.tar.gz
2025-10-09 22:52:07 (129076): Guest Log: -rw-r--r--. 1 root root   1064960 Oct  9  2025 result.tar.gz
2025-10-09 22:52:07 (129076): Guest Log: -rw-r--r--. 1 root root     15120 Oct  9 19:10 start_atlas.sh
2025-10-09 22:52:07 (129076): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-09 22:52:07 (129076): VM Completion File Detected.
2025-10-09 22:52:07 (129076): Powering off VM.
2025-10-09 22:52:07 (129076): Successfully stopped VM.
2025-10-09 22:52:07 (129076): Deregistering VM. (boinc_d2f08e082a4774cd, slot#1)
2025-10-09 22:52:07 (129076): Removing network bandwidth throttle group from VM.
2025-10-09 22:52:07 (129076): Removing VM from VirtualBox.
2025-10-09 22:52:12 (129076): called boinc_finish(0)

</stderr_txt>
]]>

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