Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:39:54 (1315397): wrapper (7.7.26015): starting
11:39:54 (1315397): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 11:39:54] Arguments: --nthreads 8
[2025-10-09 11:39:54] Threads: 8
[2025-10-09 11:39:54] Checking for CVMFS
[2025-10-09 11:39:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 11:39:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 11:39:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 11:39:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 11:39:55] 2.13.2.0 123651 105022 326916 151513 3 454 22615880 39288833 8775 16776704 0 47670363 99.733 38989628 35477 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-09 11:39:55] CVMFS is ok
[2025-10-09 11:39:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 11:39:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 11:39:55] Further information can be found at the LHC@home message board.
[2025-10-09 11:39:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 11:39:55] Checking for apptainer binary...
[2025-10-09 11:39:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 11:39:55] Running /usr/bin/apptainer --version
[2025-10-09 11:39:55] apptainer version 1.4.3-1.el9
[2025-10-09 11:39:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 11:39:55] c-211-19.aglt2.org
[2025-10-09 11:39:55] apptainer works
[2025-10-09 11:39:56] Set ATHENA_PROC_NUMBER=8
[2025-10-09 11:39:56] Set ATHENA_CORE_NUMBER=8
[2025-10-09 11:39:56] Starting ATLAS job with PandaID=6837329855
[2025-10-09 11:39:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 11:31:28]  *** The last 200 lines of the pilot log: ***
[2025-10-10 11:31:28] 2025-10-10 15:18:12,271 | INFO     | sum of square deviations: 839989327191.9565
[2025-10-10 11:31:28] 2025-10-10 15:18:12,852 | INFO     | monitor loop #4027: job 0:6837329855 is in state 'finished'
[2025-10-10 11:31:28] 2025-10-10 15:18:12,852 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 11:31:28] 2025-10-10 15:18:13,081 | INFO     | sum of deviations: 627783162181.6262
[2025-10-10 11:31:28] 2025-10-10 15:18:13,081 | INFO     | mean x: 1760066940.1987088
[2025-10-10 11:31:28] 2025-10-10 15:18:13,081 | INFO     | mean y: 2514059.9038737444
[2025-10-10 11:31:28] 2025-10-10 15:18:13,082 | INFO     | -- intersect: -1312907878.9236667
[2025-10-10 11:31:28] 2025-10-10 15:18:13,082 | INFO     | intersect: -1312907878.9236667
[2025-10-10 11:31:28] 2025-10-10 15:18:13,091 | INFO     | chi2: 4.685018640682753
[2025-10-10 11:31:28] 2025-10-10 15:18:13,095 | INFO     | sum of square deviations: 830983954974.9761
[2025-10-10 11:31:28] 2025-10-10 15:18:13,476 | INFO     | sum of deviations: 812937711170.2747
[2025-10-10 11:31:28] 2025-10-10 15:18:13,476 | INFO     | mean x: 1760066787.7048237
[2025-10-10 11:31:28] 2025-10-10 15:18:13,505 | INFO     | mean y: 2517188.4665226783
[2025-10-10 11:31:28] 2025-10-10 15:18:13,506 | INFO     | -- intersect: -1719326726.0127459
[2025-10-10 11:31:28] 2025-10-10 15:18:13,506 | INFO     | intersect: -1719326726.0127459
[2025-10-10 11:31:28] 2025-10-10 15:18:13,508 | INFO     | chi2: 3.137181981068624
[2025-10-10 11:31:28] 2025-10-10 15:18:13,509 | INFO     | current chi2=3.137181981068624 (change=33.03800429251998 %)
[2025-10-10 11:31:28] 2025-10-10 15:18:13,524 | INFO     | sum of square deviations: 822043103649.8151
[2025-10-10 11:31:28] 2025-10-10 15:18:14,428 | INFO     | sum of deviations: 808533500007.6528
[2025-10-10 11:31:28] 2025-10-10 15:18:14,429 | INFO     | mean x: 1760066635.2102602
[2025-10-10 11:31:28] 2025-10-10 15:18:14,429 | INFO     | mean y: 2517113.348265896
[2025-10-10 11:31:28] 2025-10-10 15:18:14,429 | INFO     | -- intersect: -1728624271.446398
[2025-10-10 11:31:28] 2025-10-10 15:18:14,429 | INFO     | intersect: -1728624271.446398
[2025-10-10 11:31:28] 2025-10-10 15:18:14,480 | INFO     | chi2: 3.1371883903960085
[2025-10-10 11:31:28] 2025-10-10 15:18:14,481 | INFO     | current chi2=3.1371883903960085 (change=-0.00020430205907912165 %)
[2025-10-10 11:31:28] 2025-10-10 15:18:14,481 | INFO     | right removable region: 1383
[2025-10-10 11:31:28] 2025-10-10 15:18:14,483 | INFO     | sum of square deviations: 830982680077.7942
[2025-10-10 11:31:28] 2025-10-10 15:18:14,844 | INFO     | sum of deviations: 296983244367.70276
[2025-10-10 11:31:28] 2025-10-10 15:18:14,845 | INFO     | mean x: 1760067092.7033837
[2025-10-10 11:31:28] 2025-10-10 15:18:14,845 | INFO     | mean y: 2519657.914326854
[2025-10-10 11:31:28] 2025-10-10 15:18:14,845 | INFO     | -- intersect: -626507213.5566243
[2025-10-10 11:31:28] 2025-10-10 15:18:14,845 | INFO     | intersect: -626507213.5566243
[2025-10-10 11:31:28] 2025-10-10 15:18:14,852 | INFO     | chi2: 2.5651118197752325
[2025-10-10 11:31:28] 2025-10-10 15:18:14,852 | INFO     | current chi2=2.5651118197752325 (change=45.24863151021709 %)
[2025-10-10 11:31:28] 2025-10-10 15:18:14,854 | INFO     | sum of square deviations: 822040809018.8997
[2025-10-10 11:31:28] 2025-10-10 15:18:14,979 | INFO     | sum of deviations: 154295818382.4925
[2025-10-10 11:31:28] 2025-10-10 15:18:14,980 | INFO     | mean x: 1760067245.2066474
[2025-10-10 11:31:28] 2025-10-10 15:18:14,980 | INFO     | mean y: 2522090.729046243
[2025-10-10 11:31:28] 2025-10-10 15:18:14,980 | INFO     | -- intersect: -327839873.09060526
[2025-10-10 11:31:28] 2025-10-10 15:18:14,980 | INFO     | intersect: -327839873.09060526
[2025-10-10 11:31:28] 2025-10-10 15:18:14,987 | INFO     | chi2: 2.2060051711064204
[2025-10-10 11:31:28] 2025-10-10 15:18:14,987 | INFO     | current chi2=2.2060051711064204 (change=13.999648900307154 %)
[2025-10-10 11:31:28] 2025-10-10 15:18:14,987 | INFO     | left removable region: 20
[2025-10-10 11:31:28] 2025-10-10 15:18:14,989 | INFO     | sum of square deviations: 785187702165.8271
[2025-10-10 11:31:28] 2025-10-10 15:18:15,206 | INFO     | sum of deviations: 132859018236.90668
[2025-10-10 11:31:28] 2025-10-10 15:18:15,206 | INFO     | mean x: 1760067214.7248716
[2025-10-10 11:31:28] 2025-10-10 15:18:15,206 | INFO     | mean y: 2528782.6104181954
[2025-10-10 11:31:28] 2025-10-10 15:18:15,207 | INFO     | -- intersect: -295286378.69979733
[2025-10-10 11:31:28] 2025-10-10 15:18:15,207 | INFO     | intersect: -295286378.69979733
[2025-10-10 11:31:28] 2025-10-10 15:18:15,229 | INFO     | chi2: 0.2735801289546261
[2025-10-10 11:31:28] 2025-10-10 15:18:15,229 | INFO     | -- intersect: -295286378.69979733
[2025-10-10 11:31:28] 2025-10-10 15:18:15,230 | INFO     | current memory leak: 0.17 B/s (using 1363 data points, chi2=0.27)
[2025-10-10 11:31:28] 2025-10-10 15:18:15,231 | INFO     | could have reported an average CPU frequency of 2900 MHz (49 samples)
[2025-10-10 11:31:28] 2025-10-10 15:18:15,232 | INFO     | ..............................
[2025-10-10 11:31:28] 2025-10-10 15:18:15,232 | INFO     | . Timing measurements:
[2025-10-10 11:31:28] 2025-10-10 15:18:15,232 | INFO     | . get job = 0 s
[2025-10-10 11:31:28] 2025-10-10 15:18:15,232 | INFO     | . initial setup = 2 s
[2025-10-10 11:31:28] 2025-10-10 15:18:15,232 | INFO     | . payload setup = 8 s
[2025-10-10 11:31:28] 2025-10-10 15:18:15,257 | INFO     | . stage-in = 0 s
[2025-10-10 11:31:28] 2025-10-10 15:18:15,257 | INFO     | . payload execution = 85008 s
[2025-10-10 11:31:28] 2025-10-10 15:18:15,257 | INFO     | . stage-out = 4 s
[2025-10-10 11:31:28] 2025-10-10 15:18:15,257 | INFO     | . log creation = 1 s
[2025-10-10 11:31:28] 2025-10-10 15:18:15,257 | INFO     | ..............................
[2025-10-10 11:31:28] 2025-10-10 15:18:16,974 | INFO     | 
[2025-10-10 11:31:28] 2025-10-10 15:18:16,974 | INFO     | job summary report
[2025-10-10 11:31:28] 2025-10-10 15:18:16,974 | INFO     | --------------------------------------------------
[2025-10-10 11:31:28] 2025-10-10 15:18:16,974 | INFO     | PanDA job id: 6837329855
[2025-10-10 11:31:28] 2025-10-10 15:18:16,975 | INFO     | task id: 46676269
[2025-10-10 11:31:28] 2025-10-10 15:18:16,975 | INFO     | errors: (none)
[2025-10-10 11:31:28] 2025-10-10 15:18:16,975 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 11:31:28] 2025-10-10 15:18:16,975 | INFO     | pilot state: finished 
[2025-10-10 11:31:28] 2025-10-10 15:18:16,975 | INFO     | transexitcode: 0
[2025-10-10 11:31:28] 2025-10-10 15:18:16,975 | INFO     | exeerrorcode: 0
[2025-10-10 11:31:28] 2025-10-10 15:18:16,976 | INFO     | exeerrordiag: 
[2025-10-10 11:31:28] 2025-10-10 15:18:16,976 | INFO     | exitcode: 0
[2025-10-10 11:31:28] 2025-10-10 15:18:16,976 | INFO     | exitmsg: OK
[2025-10-10 11:31:28] 2025-10-10 15:18:16,976 | INFO     | cpuconsumptiontime: 83046 s
[2025-10-10 11:31:28] 2025-10-10 15:18:16,976 | INFO     | nevents: 400
[2025-10-10 11:31:28] 2025-10-10 15:18:16,976 | INFO     | neventsw: 0
[2025-10-10 11:31:28] 2025-10-10 15:18:16,976 | INFO     | pid: 1327034
[2025-10-10 11:31:28] 2025-10-10 15:18:16,977 | INFO     | pgrp: 1327034
[2025-10-10 11:31:28] 2025-10-10 15:18:16,977 | INFO     | corecount: 8
[2025-10-10 11:31:28] 2025-10-10 15:18:16,977 | INFO     | event service: False
[2025-10-10 11:31:28] 2025-10-10 15:18:16,977 | INFO     | sizes: {0: 2348028, 1: 2348629, 2: 2348912, 3: 2348912, 8: 2349202, 13: 2349230, 85023: 2409794, 85024: 2409793, 85029: 2418847, 85032: 2418903, 85061: 2419097}
[2025-10-10 11:31:28] 2025-10-10 15:18:17,025 | INFO     | --------------------------------------------------
[2025-10-10 11:31:28] 2025-10-10 15:18:17,025 | INFO     | 
[2025-10-10 11:31:28] 2025-10-10 15:18:17,025 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-10 11:31:28] 2025-10-10 15:18:17,224 | INFO     | PID=1320634 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 11:31:28] 2025-10-10 15:18:17,225 | INFO     | .. there are 8 such processes running
[2025-10-10 11:31:28] 2025-10-10 15:18:17,308 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,308 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,308 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,308 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,309 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,310 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,310 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,310 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,310 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,310 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,310 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,311 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 11:31:28] 2025-10-10 15:18:17,311 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,311 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 11:31:28] 2025-10-10 15:18:17,311 | INFO     | job 6837329855 has completed (purged errors)
[2025-10-10 11:31:28] 2025-10-10 15:18:17,361 | INFO     | overall cleanup function is called
[2025-10-10 11:31:28] 2025-10-10 15:18:18,377 | INFO     | --- collectZombieJob: --- 10, [1327034]
[2025-10-10 11:31:28] 2025-10-10 15:18:18,378 | INFO     | zombie collector waiting for pid 1327034
[2025-10-10 11:31:28] 2025-10-10 15:18:18,378 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 11:31:28] 2025-10-10 15:18:18,378 | INFO     | collected zombie processes
[2025-10-10 11:31:28] 2025-10-10 15:18:18,378 | INFO     | will attempt to kill all subprocesses of pid=1327034
[2025-10-10 11:31:28] 2025-10-10 15:18:20,585 | INFO     | process IDs to be killed: [1327034] (in reverse order)
[2025-10-10 11:31:28] 2025-10-10 15:18:20,992 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 11:31:28] 2025-10-10 15:18:20,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 11:31:28] 2025-10-10 15:18:21,135 | INFO     | did not find any defunct processes belonging to 1327034
[2025-10-10 11:31:28] 2025-10-10 15:18:21,258 | INFO     | did not find any defunct processes belonging to 1327034
[2025-10-10 11:31:28] 2025-10-10 15:18:21,258 | INFO     | ready for new job
[2025-10-10 11:31:28] 2025-10-10 15:18:21,259 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 11:31:28] 2025-10-10 15:18:21,288 | INFO     | ***************************************
[2025-10-10 11:31:28] 2025-10-10 15:18:21,288 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 11:31:28] 2025-10-10 15:18:21,288 | INFO     | ***************************************
[2025-10-10 11:31:28] 2025-10-10 15:18:21,288 | INFO     | 
[2025-10-10 11:31:28] 2025-10-10 15:18:21,296 | INFO     | architecture information:
[2025-10-10 11:31:28] 2025-10-10 15:18:21,298 | INFO     | executing command: cat /etc/os-release
[2025-10-10 11:31:28] 2025-10-10 15:18:21,342 | INFO     | cat /etc/os-release:
[2025-10-10 11:31:28] NAME="CentOS Linux"
[2025-10-10 11:31:28] VERSION="7 (Core)"
[2025-10-10 11:31:28] ID="centos"
[2025-10-10 11:31:28] ID_LIKE="rhel fedora"
[2025-10-10 11:31:28] VERSION_ID="7"
[2025-10-10 11:31:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 11:31:28] ANSI_COLOR="0;31"
[2025-10-10 11:31:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 11:31:28] HOME_URL="https://www.centos.org/"
[2025-10-10 11:31:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 11:31:28] 
[2025-10-10 11:31:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 11:31:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 11:31:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 11:31:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 11:31:28] 
[2025-10-10 11:31:28] 2025-10-10 15:18:21,342 | INFO     | ***************************************
[2025-10-10 11:31:28] 2025-10-10 15:18:21,846 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-10 11:31:28] 2025-10-10 15:18:21,922 | INFO     | sufficient remaining disk space (51883540480 B)
[2025-10-10 11:31:28] 2025-10-10 15:18:21,922 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 11:31:28] 2025-10-10 15:18:21,923 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 11:31:28] 2025-10-10 15:18:21,923 | INFO     | update_server=False
[2025-10-10 11:31:28] 2025-10-10 15:18:21,923 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 11:31:28] 2025-10-10 15:18:21,939 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 11:31:28] 2025-10-10 15:18:21,939 | INFO     | aborting loop
[2025-10-10 11:31:28] 2025-10-10 15:18:21,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 11:31:28] 2025-10-10 15:18:22,141 | INFO     | all job control threads have been joined
[2025-10-10 11:31:28] 2025-10-10 15:18:22,452 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 11:31:28] 2025-10-10 15:18:22,602 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 11:31:28] 2025-10-10 15:18:22,930 | INFO     | [job] retrieve thread has finished
[2025-10-10 11:31:28] 2025-10-10 15:18:22,944 | INFO     | [job] job monitor thread has finished
[2025-10-10 11:31:28] 2025-10-10 15:18:22,962 | INFO     | all data control threads have been joined
[2025-10-10 11:31:28] 2025-10-10 15:18:22,999 | INFO     | [job] queue monitor thread has finished
[2025-10-10 11:31:28] 2025-10-10 15:18:23,160 | INFO     | [job] control thread has finished
[2025-10-10 11:31:28] 2025-10-10 15:18:23,197 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 11:31:28] 2025-10-10 15:18:23,208 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 11:31:28] 2025-10-10 15:18:23,243 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 11:31:28] 2025-10-10 15:18:23,516 | INFO     | all payload control threads have been joined
[2025-10-10 11:31:28] 2025-10-10 15:18:23,566 | INFO     | [job] validate thread has finished
[2025-10-10 11:31:28] 2025-10-10 15:18:23,588 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 11:31:28] 2025-10-10 15:18:23,612 | INFO     | [data] copytool_in thread has finished
[2025-10-10 11:31:28] 2025-10-10 15:18:23,969 | INFO     | [data] control thread has finished
[2025-10-10 11:31:28] 2025-10-10 15:18:24,522 | INFO     | [payload] validate_post thread has finished
[2025-10-10 11:31:28] 2025-10-10 15:18:24,522 | INFO     | [payload] control thread has finished
[2025-10-10 11:31:28] 2025-10-10 15:18:24,533 | INFO     | [payload] failed_post thread has finished
[2025-10-10 11:31:28] 2025-10-10 15:18:24,609 | INFO     | [data] copytool_out thread has finished
[2025-10-10 11:31:28] 2025-10-10 15:18:26,463 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 11:31:28] 2025-10-10 15:18:49,706 | INFO     | PID=1320634 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 11:31:28] 2025-10-10 15:18:49,707 | INFO     | .. there are 8 such processes running
[2025-10-10 11:31:28] 2025-10-10 15:18:49,707 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 11:31:28] 2025-10-10 15:18:49,708 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 11:31:28] 2025-10-10 15:18:49,708 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 11:31:28] 2025-10-10 15:19:11,542 | INFO     | [monitor] cgroup control has ended
[2025-10-10 11:31:28] 2025-10-10 15:19:11,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139762036705088)>', '<ExcThread(monitor, started 139761297639168)>']
[2025-10-10 11:31:28] 2025-10-10 15:19:11,880 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 11:31:28] 2025-10-10 15:19:11,880 | INFO     | [monitor] control thread has ended
[2025-10-10 11:31:28] 2025-10-10 15:19:16,955 | INFO     | all workflow threads have been joined
[2025-10-10 11:31:28] 2025-10-10 15:19:16,956 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 11:31:28] 2025-10-10 15:19:16,956 | INFO     | traces error code: 0
[2025-10-10 11:31:28] 2025-10-10 15:19:16,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 11:31:28] 2025-10-10 15:19:20,134 [wrapper] ==== pilot stdout END ====
[2025-10-10 11:31:28] 2025-10-10 15:19:20,154 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 11:31:28] 2025-10-10 15:19:20,173 [wrapper] pilotpid: 1320634
[2025-10-10 11:31:28] 2025-10-10 15:19:20,191 [wrapper] Pilot exit status: 0
[2025-10-10 11:31:28] 2025-10-10 15:19:20,324 [wrapper] pandaids: 6837329855
[2025-10-10 11:31:28] 2025-10-10 15:19:21,159 [wrapper] cleanup supervisor_pilot 3238863 1320635
[2025-10-10 11:31:28] 2025-10-10 15:19:21,163 [wrapper] Test setup, not cleaning
[2025-10-10 11:31:28] 2025-10-10 15:19:21,167 [wrapper] apfmon messages muted
[2025-10-10 11:31:28] 2025-10-10 15:19:21,171 [wrapper] ==== wrapper stdout END ====
[2025-10-10 11:31:28] 2025-10-10 15:19:21,174 [wrapper] ==== wrapper stderr END ====
[2025-10-10 11:31:28]  *** Error codes and diagnostics ***
[2025-10-10 11:31:28]     "exeErrorCode": 0,
[2025-10-10 11:31:28]     "exeErrorDiag": "",
[2025-10-10 11:31:28]     "pilotErrorCode": 0,
[2025-10-10 11:31:28]     "pilotErrorDiag": "",
[2025-10-10 11:31:28]  *** Listing of results directory ***
[2025-10-10 11:31:28] total 433392
[2025-10-10 11:31:28] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 06:51 queuedata.json
[2025-10-10 11:31:28] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 06:52 pilot3.tar.gz
[2025-10-10 11:31:28] -rwx------. 1 boincer umatlas     36292 Oct  9 06:55 runpilot2-wrapper.sh
[2025-10-10 11:31:28] -rw-r--r--. 1 boincer umatlas       100 Oct  9 11:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 11:31:28] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 11:39 run_atlas
[2025-10-10 11:31:28] -rw-r--r--. 1 boincer umatlas       105 Oct  9 11:39 job.xml
[2025-10-10 11:31:28] -rw-r--r--. 2 boincer umatlas 219248209 Oct  9 11:39 EVNT.46676267._000603.pool.root.1
[2025-10-10 11:31:28] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 11:39 start_atlas.sh
[2025-10-10 11:31:28] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 11:39 shared
[2025-10-10 11:31:28] -rw-r--r--. 2 boincer umatlas    569680 Oct  9 11:39 input.tar.gz
[2025-10-10 11:31:28] -rw-r--r--. 1 boincer umatlas         0 Oct  9 11:39 boinc_lockfile
[2025-10-10 11:31:28] -rw-r--r--. 1 boincer umatlas      2550 Oct  9 11:39 pandaJob.out
[2025-10-10 11:31:28] -rw-------. 1 boincer umatlas    975462 Oct  9 11:40 agis_schedconf.cvmfs.json
[2025-10-10 11:31:28] drwx------. 5 boincer umatlas      4096 Oct  9 11:40 pilot3
[2025-10-10 11:31:28] -rw-------. 1 boincer umatlas 199752126 Oct 10 11:15 HITS.46676269._014714.pool.root.1
[2025-10-10 11:31:28] -rw-r--r--. 1 boincer umatlas       531 Oct 10 11:16 boinc_task_state.xml
[2025-10-10 11:31:28] -rw-------. 1 boincer umatlas      1040 Oct 10 11:17 memory_monitor_summary.json
[2025-10-10 11:31:28] -rw-------. 1 boincer umatlas   1560580 Oct 10 11:17 agis_ddmendpoints.agis.ALL.json
[2025-10-10 11:31:28] -rw-------. 1 boincer umatlas   1253910 Oct 10 11:17 log.46676269._014714.job.log.tgz.1
[2025-10-10 11:31:28] -rw-------. 1 boincer umatlas        95 Oct 10 11:17 pilot_heartbeat.json
[2025-10-10 11:31:28] -rw-------. 1 boincer umatlas      7817 Oct 10 11:18 heartbeat.json
[2025-10-10 11:31:28] -rw-------. 1 boincer umatlas      4823 Oct 10 11:19 pilotlog.txt
[2025-10-10 11:31:28] -rw-------. 1 boincer umatlas   9187928 Oct 10 11:19 log.46676269._014714.job.log.1
[2025-10-10 11:31:28] -rw-------. 1 boincer umatlas       357 Oct 10 11:19 output.list
[2025-10-10 11:31:28] -rw-r--r--. 1 boincer umatlas       620 Oct 10 11:19 runtime_log
[2025-10-10 11:31:28] -rw-------. 1 boincer umatlas  10465280 Oct 10 11:19 result.tar.gz
[2025-10-10 11:31:28] -rw-------. 1 boincer umatlas       658 Oct 10 11:19 uMmMDm1T3Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmKeNMDmNoYSXo.diag
[2025-10-10 11:31:28] -rw-r--r--. 1 boincer umatlas      8704 Oct 10 11:19 runtime_log.err
[2025-10-10 11:31:28] -rw-r--r--. 1 boincer umatlas      6524 Oct 10 11:31 init_data.xml
[2025-10-10 11:31:28] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 11:31 boinc_mmap_file
[2025-10-10 11:31:28] -rw-r--r--. 1 boincer umatlas        28 Oct 10 11:31 wrapper_checkpoint.txt
[2025-10-10 11:31:28] -rw-r--r--. 1 boincer umatlas     21227 Oct 10 11:31 stderr.txt
[2025-10-10 11:31:29] HITS file was successfully produced:
[2025-10-10 11:31:29] -rw-------. 1 boincer umatlas 199752126 Oct 10 11:15 shared/HITS.pool.root.1
[2025-10-10 11:31:29]  *** Contents of shared directory: ***
[2025-10-10 11:31:29] total 419984
[2025-10-10 11:31:29] -rw-r--r--. 2 boincer umatlas 219248209 Oct  9 11:39 ATLAS.root_0
[2025-10-10 11:31:29] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 11:39 start_atlas.sh
[2025-10-10 11:31:29] -rw-r--r--. 2 boincer umatlas    569680 Oct  9 11:39 input.tar.gz
[2025-10-10 11:31:29] -rw-------. 1 boincer umatlas 199752126 Oct 10 11:15 HITS.pool.root.1
[2025-10-10 11:31:29] -rw-------. 1 boincer umatlas  10465280 Oct 10 11:19 result.tar.gz
11:31:30 (1315397): run_atlas exited; CPU time 85710.588215
11:31:30 (1315397): called boinc_finish(0)

</stderr_txt>
]]>

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