Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:47:44 (408186): wrapper (7.7.26015): starting
06:47:44 (408186): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 06:47:44] Arguments: --nthreads 12
[2025-10-09 06:47:44] Threads: 12
[2025-10-09 06:47:44] Checking for CVMFS
[2025-10-09 06:47:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 06:47:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 06:47:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 06:47:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 06:47:45] 2.11.5.0 2869 27214 165768 151513 1 519 41450215 45568001 12876 130560 0 237379148 99.838 111589906 26543 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-09 06:47:45] CVMFS is ok
[2025-10-09 06:47:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 06:47:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 06:47:45] Further information can be found at the LHC@home message board.
[2025-10-09 06:47:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 06:47:45] Checking for apptainer binary...
[2025-10-09 06:47:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 06:47:45] Running /usr/bin/apptainer --version
[2025-10-09 06:47:45] apptainer version 1.4.1-1.el9
[2025-10-09 06:47:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 06:47:46] wns0048.triumf.lcg
[2025-10-09 06:47:46] apptainer works
[2025-10-09 06:47:46] Set ATHENA_PROC_NUMBER=12
[2025-10-09 06:47:46] Set ATHENA_CORE_NUMBER=12
[2025-10-09 06:47:46] Starting ATLAS job with PandaID=6837336875
[2025-10-09 06:47:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 06:52:10]  *** The last 200 lines of the pilot log: ***
[2025-10-09 06:52:10] 2025-10-09 13:51:23,363 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | WARNING  | found no stored workdir sizes
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | INFO     | will not add max space = 0 B to job metrics
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | WARNING  | wrong length of table data, x=[1760017723.0], y=[1451.0] (must be same and length>=4)
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | INFO     | could have reported an average CPU frequency of 2480 MHz (4 samples)
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | INFO     | ..............................
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | INFO     | . Timing measurements:
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | INFO     | . get job = 0 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . initial setup = 3 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . payload setup = 10 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . stage-in = 0 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . payload execution = 33 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . stage-out = 1 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . log creation = 0 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | ..............................
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837336875/pilotlog.txt
[2025-10-09 06:52:10] 2025-10-09 13:51:23,387 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-09 06:52:10] - Log from pilotlog.txt -
[2025-10-09 06:52:10] 2025-10-09 13:51:23,363 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 06:52:10] 2025-10-09 13:51:23,363 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 06:52:10] 2025-10-09 13:51:23,363 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 06:52:10] 2025-10-09 13:51:23,363 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | WARNING  | found no stored workdir sizes
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | INFO     | will not add max space = 0 B to job metrics
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | WARNING  | wrong length of table data, x=[1760017723.0], y=[1451.0] (must be same and length>=4)
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | INFO     | could have reported an average CPU frequency of 2480 MHz (4 samples)
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | INFO     | ..............................
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | INFO     | . Timing measurements:
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | INFO     | . get job = 0 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . initial setup = 3 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . payload setup = 10 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . stage-in = 0 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . payload execution = 33 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . stage-out = 1 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . log creation = 0 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | ..............................
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837336875/pilotlog.txt
[2025-10-09 06:52:10] 2025-10-09 13:51:23,387 | WARNING  | 
[2025-10-09 06:52:10] [begin log extracts]
[2025-10-09 06:52:10] - Log from pilotlog.txt -
[2025-10-09 06:52:10] 2025-10-09 13:51:23,363 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 06:52:10] 2025-10-09 13:51:23,363 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 06:52:10] 2025-10-09 13:51:23,363 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 06:52:10] 2025-10-09 13:51:23,363 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | WARNING  | found no stored workdir sizes
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | INFO     | will not add max space = 0 B to job metrics
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | WARNING  | wrong length of table data, x=[1760017723.0], y=[1451.0] (must be same and length>=4)
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | INFO     | could have reported an average CPU frequency of 2480 MHz (4 samples)
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | INFO     | ..............................
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | INFO     | . Timing measurements:
[2025-10-09 06:52:10] 2025-10-09 13:51:23,364 | INFO     | . get job = 0 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . initial setup = 3 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . payload setup = 10 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . stage-in = 0 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . payload execution = 33 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . stage-out = 1 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | . log creation = 0 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | ..............................
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 06:52:10] 2025-10-09 13:51:23,365 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837336875/pilotlog.txt
[2025-10-09 06:52:10] [end log extracts]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,388 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-09 06:52:10] 2025-10-09 13:51:23,388 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | 
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | job summary report
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | --------------------------------------------------
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | PanDA job id: 6837336875
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | task id: 46676269
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-09 06:49:01,466 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | pilot state: failed 
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | transexitcode: 65
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | exeerrorcode: 65
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | exitcode: 65
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | cpuconsumptiontime: 17 s
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | nevents: 0
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | neventsw: 0
[2025-10-09 06:52:10] 2025-10-09 13:51:23,453 | INFO     | pid: 418389
[2025-10-09 06:52:10] 2025-10-09 13:51:23,454 | INFO     | pgrp: 418389
[2025-10-09 06:52:10] 2025-10-09 13:51:23,454 | INFO     | corecount: 12
[2025-10-09 06:52:10] 2025-10-09 13:51:23,454 | INFO     | event service: False
[2025-10-09 06:52:10] 2025-10-09 13:51:23,454 | INFO     | sizes: {0: 2348027, 1: 2348880, 8: 2349142, 12: 2349170, 45: 2372342, 47: 2376818, 180: 2376956}
[2025-10-09 06:52:10] 2025-10-09 13:51:23,454 | INFO     | --------------------------------------------------
[2025-10-09 06:52:10] 2025-10-09 13:51:23,454 | INFO     | 
[2025-10-09 06:52:10] 2025-10-09 13:51:23,454 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-09 06:52:10] 2025-10-09 13:51:23,471 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,471 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,471 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,471 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,471 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,471 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,471 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,471 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,471 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,472 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,472 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,472 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,472 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,472 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,472 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,472 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 06:52:10] 2025-10-09 13:51:23,472 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,472 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 06:52:10] 2025-10-09 13:51:23,472 | INFO     | job 6837336875 has completed (purged errors)
[2025-10-09 06:52:10] 2025-10-09 13:51:23,472 | INFO     | overall cleanup function is called
[2025-10-09 06:52:10] 2025-10-09 13:51:24,478 | INFO     | --- collectZombieJob: --- 10, [418389]
[2025-10-09 06:52:10] 2025-10-09 13:51:24,478 | INFO     | zombie collector waiting for pid 418389
[2025-10-09 06:52:10] 2025-10-09 13:51:24,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 06:52:10] 2025-10-09 13:51:24,478 | INFO     | collected zombie processes
[2025-10-09 06:52:10] 2025-10-09 13:51:24,478 | INFO     | will attempt to kill all subprocesses of pid=418389
[2025-10-09 06:52:10] 2025-10-09 13:51:24,677 | INFO     | process IDs to be killed: [418389] (in reverse order)
[2025-10-09 06:52:10] 2025-10-09 13:51:24,779 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 06:52:10] 2025-10-09 13:51:24,779 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 06:52:10] 2025-10-09 13:51:24,785 | INFO     | did not find any defunct processes belonging to 418389
[2025-10-09 06:52:10] 2025-10-09 13:51:24,790 | INFO     | did not find any defunct processes belonging to 418389
[2025-10-09 06:52:10] 2025-10-09 13:51:24,791 | INFO     | ready for new job
[2025-10-09 06:52:10] 2025-10-09 13:51:24,791 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 06:52:10] 2025-10-09 13:51:24,792 | INFO     | ***************************************
[2025-10-09 06:52:10] 2025-10-09 13:51:24,792 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 06:52:10] 2025-10-09 13:51:24,792 | INFO     | ***************************************
[2025-10-09 06:52:10] 2025-10-09 13:51:24,792 | INFO     | 
[2025-10-09 06:52:10] 2025-10-09 13:51:24,794 | INFO     | architecture information:
[2025-10-09 06:52:10] 2025-10-09 13:51:24,795 | INFO     | executing command: cat /etc/os-release
[2025-10-09 06:52:10] 2025-10-09 13:51:24,832 | INFO     | cat /etc/os-release:
[2025-10-09 06:52:10] NAME="CentOS Linux"
[2025-10-09 06:52:10] VERSION="7 (Core)"
[2025-10-09 06:52:10] ID="centos"
[2025-10-09 06:52:10] ID_LIKE="rhel fedora"
[2025-10-09 06:52:10] VERSION_ID="7"
[2025-10-09 06:52:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 06:52:10] ANSI_COLOR="0;31"
[2025-10-09 06:52:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 06:52:10] HOME_URL="https://www.centos.org/"
[2025-10-09 06:52:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 06:52:10] 
[2025-10-09 06:52:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 06:52:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 06:52:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 06:52:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 06:52:10] 
[2025-10-09 06:52:10] 2025-10-09 13:51:24,833 | INFO     | ***************************************
[2025-10-09 06:52:10] 2025-10-09 13:51:25,336 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-09 06:52:10] 2025-10-09 13:51:25,354 | INFO     | sufficient remaining disk space (1898555899904 B)
[2025-10-09 06:52:10] 2025-10-09 13:51:25,354 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 06:52:10] 2025-10-09 13:51:25,354 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 06:52:10] 2025-10-09 13:51:25,355 | INFO     | update_server=False
[2025-10-09 06:52:10] 2025-10-09 13:51:25,355 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 06:52:10] 2025-10-09 13:51:25,355 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 06:52:10] 2025-10-09 13:51:25,378 | INFO     | all data control threads have been joined
[2025-10-09 06:52:10] 2025-10-09 13:51:25,580 | INFO     | all job control threads have been joined
[2025-10-09 06:52:10] 2025-10-09 13:51:25,642 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 06:52:10] 2025-10-09 13:51:25,975 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 06:52:10] 2025-10-09 13:51:25,975 | INFO     | aborting loop
[2025-10-09 06:52:10] 2025-10-09 13:51:26,132 | INFO     | all payload control threads have been joined
[2025-10-09 06:52:10] 2025-10-09 13:51:26,360 | INFO     | [job] queue monitor thread has finished
[2025-10-09 06:52:10] 2025-10-09 13:51:26,361 | INFO     | [job] retrieve thread has finished
[2025-10-09 06:52:10] 2025-10-09 13:51:26,384 | INFO     | [data] control thread has finished
[2025-10-09 06:52:10] 2025-10-09 13:51:26,586 | INFO     | [job] control thread has finished
[2025-10-09 06:52:10] 2025-10-09 13:51:26,754 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 06:52:10] 2025-10-09 13:51:26,981 | INFO     | [job] job monitor thread has finished
[2025-10-09 06:52:10] 2025-10-09 13:51:27,087 | INFO     | [payload] validate_post thread has finished
[2025-10-09 06:52:10] 2025-10-09 13:51:27,119 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 06:52:10] 2025-10-09 13:51:27,138 | INFO     | [payload] control thread has finished
[2025-10-09 06:52:10] 2025-10-09 13:51:27,387 | INFO     | [job] validate thread has finished
[2025-10-09 06:52:10] 2025-10-09 13:51:27,449 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 06:52:10] 2025-10-09 13:51:27,539 | INFO     | [payload] failed_post thread has finished
[2025-10-09 06:52:10] 2025-10-09 13:51:27,553 | INFO     | [data] copytool_in thread has finished
[2025-10-09 06:52:10] 2025-10-09 13:51:27,638 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 06:52:10] 2025-10-09 13:51:27,649 | INFO     | [data] copytool_out thread has finished
[2025-10-09 06:52:10] 2025-10-09 13:51:27,726 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 06:52:10] 2025-10-09 13:51:30,763 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 06:52:10] 2025-10-09 13:51:56,325 | INFO     | PID=411853 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 06:52:10] 2025-10-09 13:51:56,325 | INFO     | .. there are 14 such processes running
[2025-10-09 06:52:10] 2025-10-09 13:51:56,326 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 06:52:10] 2025-10-09 13:51:56,326 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 06:52:10] 2025-10-09 13:51:56,326 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 06:52:10] 2025-10-09 13:52:03,881 | INFO     | [monitor] cgroup control has ended
[2025-10-09 06:52:10] 2025-10-09 13:52:04,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140610476418880)>', '<ExcThread(monitor, started 140609671112448)>']
[2025-10-09 06:52:10] 2025-10-09 13:52:05,379 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 06:52:10] 2025-10-09 13:52:05,380 | INFO     | [monitor] control thread has ended
[2025-10-09 06:52:10] 2025-10-09 13:52:09,713 | INFO     | all workflow threads have been joined
[2025-10-09 06:52:10] 2025-10-09 13:52:09,714 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 06:52:10] 2025-10-09 13:52:09,714 | INFO     | traces error code: 0
[2025-10-09 06:52:10] 2025-10-09 13:52:09,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 06:52:10] 2025-10-09 13:52:10,095 [wrapper] ==== pilot stdout END ====
[2025-10-09 06:52:10] 2025-10-09 13:52:10,098 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 06:52:10] 2025-10-09 13:52:10,100 [wrapper] pilotpid: 411853
[2025-10-09 06:52:10] 2025-10-09 13:52:10,102 [wrapper] Pilot exit status: 0
[2025-10-09 06:52:10] 2025-10-09 13:52:10,112 [wrapper] pandaids: 6837336875
[2025-10-09 06:52:10] 2025-10-09 13:52:10,151 [wrapper] cleanup supervisor_pilot  411859 411854
[2025-10-09 06:52:10] 2025-10-09 13:52:10,153 [wrapper] Test setup, not cleaning
[2025-10-09 06:52:10] 2025-10-09 13:52:10,156 [wrapper] apfmon messages muted
[2025-10-09 06:52:10] 2025-10-09 13:52:10,158 [wrapper] ==== wrapper stdout END ====
[2025-10-09 06:52:10] 2025-10-09 13:52:10,160 [wrapper] ==== wrapper stderr END ====
[2025-10-09 06:52:10]  *** Error codes and diagnostics ***
[2025-10-09 06:52:10]     "exeErrorCode": 65,
[2025-10-09 06:52:10]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 06:52:10]     "pilotErrorCode": 1305,
[2025-10-09 06:52:10]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 06:52:10]  *** Listing of results directory ***
[2025-10-09 06:52:10] total 218128
[2025-10-09 06:52:10] -rw-r--r--. 1 boinc boinc    557409 Oct  9 04:59 pilot3.tar.gz
[2025-10-09 06:52:10] -rw-r--r--. 1 boinc boinc      5112 Oct  9 05:04 queuedata.json
[2025-10-09 06:52:10] -rwx------. 1 boinc boinc     36292 Oct  9 05:06 runpilot2-wrapper.sh
[2025-10-09 06:52:10] -rw-r--r--. 1 boinc boinc       100 Oct  9 06:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 06:52:10] -rwxr-xr-x. 1 boinc boinc      7986 Oct  9 06:47 run_atlas
[2025-10-09 06:52:10] -rw-r--r--. 1 boinc boinc       105 Oct  9 06:47 job.xml
[2025-10-09 06:52:10] -rw-r--r--. 1 boinc boinc      6594 Oct  9 06:47 init_data.xml
[2025-10-09 06:52:10] -rw-r--r--. 2 boinc boinc 219252924 Oct  9 06:47 EVNT.46676267._000688.pool.root.1
[2025-10-09 06:52:10] -rw-r--r--. 2 boinc boinc     15120 Oct  9 06:47 start_atlas.sh
[2025-10-09 06:52:10] drwxrwx--x. 2 boinc boinc      4096 Oct  9 06:47 shared
[2025-10-09 06:52:10] -rw-r--r--. 2 boinc boinc    569680 Oct  9 06:47 input.tar.gz
[2025-10-09 06:52:10] -rw-r--r--. 1 boinc boinc         0 Oct  9 06:47 boinc_lockfile
[2025-10-09 06:52:10] -rw-r--r--. 1 boinc boinc      2549 Oct  9 06:47 pandaJob.out
[2025-10-09 06:52:10] -rw-------. 1 boinc boinc    975462 Oct  9 06:48 agis_schedconf.cvmfs.json
[2025-10-09 06:52:10] -rw-------. 1 boinc boinc   1560401 Oct  9 06:48 agis_ddmendpoints.agis.ALL.json
[2025-10-09 06:52:10] drwx------. 5 boinc boinc      4096 Oct  9 06:48 pilot3
[2025-10-09 06:52:10] -rw-r--r--. 1 boinc boinc       522 Oct  9 06:49 boinc_task_state.xml
[2025-10-09 06:52:10] -rw-------. 1 boinc boinc       956 Oct  9 06:49 memory_monitor_summary.json
[2025-10-09 06:52:10] -rw-------. 1 boinc boinc     21251 Oct  9 06:49 log.46676269._016685.job.log.tgz.1
[2025-10-09 06:52:10] -rw-------. 1 boinc boinc        95 Oct  9 06:51 pilot_heartbeat.json
[2025-10-09 06:52:10] -rw-------. 1 boinc boinc      8388 Oct  9 06:51 heartbeat.json
[2025-10-09 06:52:10] -rw-r--r--. 1 boinc boinc      8192 Oct  9 06:52 boinc_mmap_file
[2025-10-09 06:52:10] -rw-r--r--. 1 boinc boinc        22 Oct  9 06:52 wrapper_checkpoint.txt
[2025-10-09 06:52:10] -rw-------. 1 boinc boinc      4822 Oct  9 06:52 pilotlog.txt
[2025-10-09 06:52:10] -rw-------. 1 boinc boinc     85905 Oct  9 06:52 log.46676269._016685.job.log.1
[2025-10-09 06:52:10] -rw-------. 1 boinc boinc       188 Oct  9 06:52 output.list
[2025-10-09 06:52:10] -rw-r--r--. 1 boinc boinc       620 Oct  9 06:52 runtime_log
[2025-10-09 06:52:10] -rw-------. 1 boinc boinc    122880 Oct  9 06:52 result.tar.gz
[2025-10-09 06:52:10] -rw-r--r--. 1 boinc boinc      8528 Oct  9 06:52 runtime_log.err
[2025-10-09 06:52:10] -rw-------. 1 boinc boinc       645 Oct  9 06:52 DWMLDmZa4Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJlZNDmhbODMm.diag
[2025-10-09 06:52:10] -rw-r--r--. 1 boinc boinc     21168 Oct  9 06:52 stderr.txt
[2025-10-09 06:52:10] No HITS result produced
[2025-10-09 06:52:10]  *** Contents of shared directory: ***
[2025-10-09 06:52:10] total 214816
[2025-10-09 06:52:10] -rw-r--r--. 2 boinc boinc 219252924 Oct  9 06:47 ATLAS.root_0
[2025-10-09 06:52:10] -rw-r--r--. 2 boinc boinc     15120 Oct  9 06:47 start_atlas.sh
[2025-10-09 06:52:10] -rw-r--r--. 2 boinc boinc    569680 Oct  9 06:47 input.tar.gz
[2025-10-09 06:52:10] -rw-------. 1 boinc boinc    122880 Oct  9 06:52 result.tar.gz
06:52:11 (408186): run_atlas exited; CPU time 23.452213
06:52:11 (408186): called boinc_finish(0)

</stderr_txt>
]]>

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