Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-10 00:21:37 (11396): vboxwrapper version 26210
2025-10-10 00:21:37 (11396): BOINC client version: 7.20.2
2025-10-10 00:21:37 (11396): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-10-10 00:21:37 (11396): Successfully copied 'init_data.xml' to the shared directory.
2025-10-10 00:21:38 (11396): Create VM. (boinc_93946e171dbb41a3, slot#2)
2025-10-10 00:21:38 (11396): Setting Memory Size for VM. (4200MB)
2025-10-10 00:21:38 (11396): Setting CPU Count for VM. (2)
2025-10-10 00:21:39 (11396): Setting Chipset Options for VM.
2025-10-10 00:21:39 (11396): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-10 00:21:39 (11396): Setting Boot Options for VM.
2025-10-10 00:21:40 (11396): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-10 00:21:40 (11396): Enabling VM Network Access.
2025-10-10 00:21:40 (11396): Disabling USB Support for VM.
2025-10-10 00:21:41 (11396): Disabling COM Port Support for VM.
2025-10-10 00:21:41 (11396): Disabling LPT Port Support for VM.
2025-10-10 00:21:41 (11396): Disabling Audio Support for VM.
2025-10-10 00:21:41 (11396): Disabling Clipboard Support for VM.
2025-10-10 00:21:42 (11396): Disabling Drag and Drop Support for VM.
2025-10-10 00:21:42 (11396): Adding storage controller(s) to VM.
2025-10-10 00:21:42 (11396): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-10 00:21:44 (11396): Adding VirtualBox Guest Additions to VM.
2025-10-10 00:21:45 (11396): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-10 00:21:45 (11396): forwarding host port 52313 to guest port 80
2025-10-10 00:21:45 (11396): Enabling remote desktop for VM.
2025-10-10 00:21:46 (11396): Enabling shared directory for VM.
2025-10-10 00:21:46 (11396): Starting VM using VBoxManage interface. (boinc_93946e171dbb41a3, slot#2)
2025-10-10 00:21:54 (11396): Successfully started VM. (PID = '7612')
2025-10-10 00:21:54 (11396): Reporting VM Process ID to BOINC.
2025-10-10 00:21:54 (11396): Guest Log: BIOS: VirtualBox 7.1.6
2025-10-10 00:21:54 (11396): Guest Log: CPUID EDX: 0x178bfbff
2025-10-10 00:21:54 (11396): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-10 00:21:54 (11396): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-10 00:21:54 (11396): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-10 00:21:54 (11396): Detected: Web Application Enabled (http://localhost:52313)
2025-10-10 00:21:54 (11396): Detected: Remote Desktop Enabled (localhost:52317)
2025-10-10 00:21:54 (11396): Preference change detected
2025-10-10 00:21:54 (11396): Setting CPU throttle for VM. (80%)
2025-10-10 00:21:54 (11396): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-10 00:21:56 (11396): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-10 00:21:56 (11396): Guest Log: BIOS: Booting from Hard Disk...
2025-10-10 00:22:00 (11396): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-10 00:22:00 (11396): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-10 00:22:00 (11396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-10 00:22:08 (11396): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-10 00:22:08 (11396): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-10 00:22:26 (11396): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-10 00:22:26 (11396): Guest Log: 00:00:00.000266 main     Log opened 2025-10-10T00:22:24.521697000Z
2025-10-10 00:22:26 (11396): Guest Log: 00:00:00.000465 main     OS Product: Linux
2025-10-10 00:22:26 (11396): Guest Log: 00:00:00.000528 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-10 00:22:26 (11396): Guest Log: 00:00:00.000582 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-10 00:22:26 (11396): Guest Log: 00:00:00.000665 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-10 00:22:26 (11396): Guest Log: 00:00:00.000667 main     Process ID: 1279
2025-10-10 00:22:26 (11396): Guest Log: 00:00:00.000669 main     Package type: LINUX_64BITS_GENERIC
2025-10-10 00:22:26 (11396): Guest Log: 00:00:00.002258 main     5.2.32 r132073 started. Verbose level = 0
2025-10-10 00:22:26 (11396): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-10 00:22:26 (11396): Guest Log: [INFO] Mounting shared directory
2025-10-10 00:22:26 (11396): Guest Log: [INFO] Checking for init_data.xml
2025-10-10 00:22:32 (11396): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-10 00:22:32 (11396): Guest Log: [INFO] Detected branch: prod
2025-10-10 00:22:33 (11396): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-10 00:22:33 (11396): Guest Log: Copying input files
2025-10-10 00:22:35 (11396): Guest Log: Copied input files into RunAtlas.
2025-10-10 00:22:35 (11396): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-10 00:22:35 (11396): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-10 00:22:35 (11396): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-10 00:22:35 (11396): Guest Log: Further information can be found at the LHC@home message board.
2025-10-10 00:22:36 (11396): Guest Log: 00:00:10.010171 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 167 356 000ns (GuestNow=1 760 048 556 363 086 000 ns GuestLast=1 760 055 744 530 442 000 ns fSetTimeLastLoop=true )
2025-10-10 00:22:45 (11396): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-10 00:22:45 (11396): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-10 00:22:45 (11396): Guest Log: 2.6.3.0 1554 0 32180 151526 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-10 00:22:46 (11396): Guest Log: copied the webapp to /var/www
2025-10-10 00:22:46 (11396): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-10 00:22:46 (11396): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-10 00:22:47 (11396): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-10 00:22:47 (11396): Guest Log:  *** Starting ATLAS job. (PandaID=6837328810 taskID=46676269) ***
2025-10-10 02:02:02 (11396): Status Report: Elapsed Time: '6000.000000'
2025-10-10 02:02:02 (11396): Status Report: CPU Time: '9845.984375'
2025-10-10 03:42:54 (11396): Status Report: Elapsed Time: '12000.514017'
2025-10-10 03:42:54 (11396): Status Report: CPU Time: '20720.125000'
2025-10-10 05:23:07 (11396): Status Report: Elapsed Time: '18000.514017'
2025-10-10 05:23:07 (11396): Status Report: CPU Time: '31526.468750'
2025-10-10 07:03:15 (11396): Status Report: Elapsed Time: '24000.514017'
2025-10-10 07:03:15 (11396): Status Report: CPU Time: '42330.546875'
2025-10-10 08:43:23 (11396): Status Report: Elapsed Time: '30000.514017'
2025-10-10 08:43:23 (11396): Status Report: CPU Time: '53136.265625'
2025-10-10 10:23:31 (11396): Status Report: Elapsed Time: '36000.514017'
2025-10-10 10:23:31 (11396): Status Report: CPU Time: '63938.906250'
2025-10-10 12:03:39 (11396): Status Report: Elapsed Time: '42000.514017'
2025-10-10 12:03:39 (11396): Status Report: CPU Time: '74744.531250'
2025-10-10 13:43:50 (11396): Status Report: Elapsed Time: '48000.514017'
2025-10-10 13:43:50 (11396): Status Report: CPU Time: '85547.359375'
2025-10-10 15:24:01 (11396): Status Report: Elapsed Time: '54000.514017'
2025-10-10 15:24:01 (11396): Status Report: CPU Time: '96349.203125'
2025-10-10 17:04:10 (11396): Status Report: Elapsed Time: '60000.514017'
2025-10-10 17:04:10 (11396): Status Report: CPU Time: '107156.515625'
2025-10-10 18:44:19 (11396): Status Report: Elapsed Time: '66000.514017'
2025-10-10 18:44:19 (11396): Status Report: CPU Time: '117963.406250'
2025-10-10 20:24:32 (11396): Status Report: Elapsed Time: '72000.514017'
2025-10-10 20:24:32 (11396): Status Report: CPU Time: '128769.437500'
2025-10-10 21:05:10 (11396): Guest Log:  *** Job finished ***
2025-10-10 21:05:10 (11396): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:04:38,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:04:38,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:01,554 | INFO     | [monitor] cgroup control has ended
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:03,387 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140079339509568)>', '<ExcThread(monitor, started 140078680635136)>']
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:04,016 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:04,016 | INFO     | [monitor] control thread has ended
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:08,393 | INFO     | all workflow threads have been joined
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:08,393 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:08,394 | INFO     | traces error code: 0
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:08,394 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:08,639 [wrapper] ==== pilot stdout END ====
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:08,650 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:08,661 [wrapper] pilotpid: 5932
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:08,673 [wrapper] Pilot exit status: 0
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:08,873 [wrapper] pandaids: 6837328810
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:08,968 [wrapper] cleanup supervisor_pilot  9569 5933
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:08,981 [wrapper] Test setup, not cleaning
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:09,013 [wrapper] apfmon messages muted
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:09,025 [wrapper] ==== wrapper stdout END ====
2025-10-10 21:05:10 (11396): Guest Log: 2025-10-10 19:05:09,037 [wrapper] ==== wrapper stderr END ====
2025-10-10 21:05:10 (11396): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 21:05:10 (11396): Guest Log:     "exeErrorCode": 0,
2025-10-10 21:05:10 (11396): Guest Log:     "exeErrorDiag": "",
2025-10-10 21:05:10 (11396): Guest Log:     "pilotErrorCode": 0,
2025-10-10 21:05:10 (11396): Guest Log:     "pilotErrorDiag": "",
2025-10-10 21:05:10 (11396): Guest Log:  *** Listing of results directory ***
2025-10-10 21:05:10 (11396): Guest Log: total 217820
2025-10-10 21:05:10 (11396): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  9 10:27 pilot3.tar.gz
2025-10-10 21:05:10 (11396): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  9 10:48 queuedata.json
2025-10-10 21:05:10 (11396): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  9 10:49 runpilot2-wrapper.sh
2025-10-10 21:05:10 (11396): Guest Log: -rwxr-xr-x. 1 atlas atlas     10489 Oct  9 22:22 init_data.xml
2025-10-10 21:05:10 (11396): Guest Log: -rwxr-xr-x. 1 atlas atlas    569683 Oct  9 22:22 input.tar.gz
2025-10-10 21:05:10 (11396): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  9 22:22 start_atlas.sh
2025-10-10 21:05:10 (11396): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  9 22:22 EVNT.46676267._000577.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 21:05:10 (11396): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct  9 22:22 pandaJob.out
2025-10-10 21:05:10 (11396): Guest Log: -rw-------. 1 atlas atlas    975454 Oct  9 22:23 agis_schedconf.cvmfs.json
2025-10-10 21:05:10 (11396): Guest Log: drwx------. 5 atlas atlas      4096 Oct  9 22:23 pilot3
2025-10-10 21:05:10 (11396): Guest Log: -rw-------. 1 atlas atlas 197436033 Oct 10 19:02 HITS.46676269._014056.pool.root.1
2025-10-10 21:05:10 (11396): Guest Log: -rw-------. 1 atlas atlas      1028 Oct 10 19:03 memory_monitor_summary.json
2025-10-10 21:05:10 (11396): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 10 19:03 agis_ddmendpoints.agis.ALL.json
2025-10-10 21:05:10 (11396): Guest Log: -rw-------. 1 atlas atlas   1145442 Oct 10 19:03 log.46676269._014056.job.log.tgz.1
2025-10-10 21:05:10 (11396): Guest Log: -rw-------. 1 atlas atlas      7788 Oct 10 19:04 heartbeat.json
2025-10-10 21:05:10 (11396): Guest Log: -rw-------. 1 atlas atlas        95 Oct 10 19:04 pilot_heartbeat.json
2025-10-10 21:05:10 (11396): Guest Log: -rw-------. 1 atlas atlas      4991 Oct 10 19:05 pilotlog.txt
2025-10-10 21:05:10 (11396): Guest Log: -rw-------. 1 atlas atlas   9744330 Oct 10 19:05 log.46676269._014056.job.log.1
2025-10-10 21:05:10 (11396): Guest Log: -rw-------. 1 atlas atlas       357 Oct 10 19:05 output.list
2025-10-10 21:05:10 (11396): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 10 19:05 runtime_log
2025-10-10 21:05:10 (11396): Guest Log: -rw-------. 1 atlas atlas  10905600 Oct 10 19:05 result.tar.gz
2025-10-10 21:05:10 (11396): Guest Log: -rw-r--r--. 1 atlas atlas      8633 Oct 10 19:05 runtime_log.err
2025-10-10 21:05:10 (11396): Guest Log: -rw-------. 1 atlas atlas       662 Oct 10 19:05 BK9KDmjO3Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmoYNMDmRKL5Io.diag
2025-10-10 21:05:10 (11396): Guest Log: Looking for outputfile HITS.46676269._014056.pool.root.1
2025-10-10 21:05:10 (11396): Guest Log: HITS file was successfully produced
2025-10-10 21:05:10 (11396): Guest Log: -rw-------. 1 atlas atlas 197436033 Oct 10 19:02 /home/atlas/RunAtlas/HITS.46676269._014056.pool.root.1
2025-10-10 21:05:12 (11396): Guest Log: Successfully finished the ATLAS job!
2025-10-10 21:05:12 (11396): Guest Log: Copying the results back to the shared directory!
2025-10-10 21:05:13 (11396): Guest Log:  *** Contents of shared directory: ***
2025-10-10 21:05:13 (11396): Guest Log: total 419352
2025-10-10 21:05:13 (11396): Guest Log: -rwxrwxrwx. 1 root root 220463290 Oct  9 22:21 ATLAS.root_0
2025-10-10 21:05:13 (11396): Guest Log: -rwxrwxrwx. 1 root root 197436033 Oct 10 19:05 HITS.pool.root.1
2025-10-10 21:05:13 (11396): Guest Log: -rwxrwxrwx. 1 root root     10489 Oct  9 22:21 init_data.xml
2025-10-10 21:05:13 (11396): Guest Log: -rwxrwxrwx. 1 root root    569683 Oct  9 13:14 input.tar.gz
2025-10-10 21:05:13 (11396): Guest Log: -rwxrwxrwx. 1 root root  10905600 Oct 10 19:05 result.tar.gz
2025-10-10 21:05:13 (11396): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  9 13:14 start_atlas.sh
2025-10-10 21:05:13 (11396): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 21:05:13 (11396): VM Completion File Detected.
2025-10-10 21:05:13 (11396): Powering off VM.
2025-10-10 21:05:15 (11396): Successfully stopped VM.
2025-10-10 21:05:15 (11396): Deregistering VM. (boinc_93946e171dbb41a3, slot#2)
2025-10-10 21:05:15 (11396): Removing network bandwidth throttle group from VM.
2025-10-10 21:05:16 (11396): Removing VM from VirtualBox.
2025-10-10 21:05:21 (11396): called boinc_finish(0)

</stderr_txt>
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