Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 19:16:08 (18368): vboxwrapper version 26210
2025-10-13 19:16:08 (18368): BOINC client version: 8.0.2
2025-10-13 19:16:10 (18368): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2025-10-13 19:16:11 (18368): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 19:16:11 (18368): Create VM. (boinc_533d1fbe40bf268f, slot#0)
2025-10-13 19:16:11 (18368): Setting Memory Size for VM. (4400MB)
2025-10-13 19:16:12 (18368): Setting CPU Count for VM. (2)
2025-10-13 19:16:12 (18368): Setting Chipset Options for VM.
2025-10-13 19:16:12 (18368): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 19:16:12 (18368): Setting Boot Options for VM.
2025-10-13 19:16:13 (18368): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 19:16:13 (18368): Enabling VM Network Access.
2025-10-13 19:16:14 (18368): Disabling USB Support for VM.
2025-10-13 19:16:14 (18368): Disabling COM Port Support for VM.
2025-10-13 19:16:14 (18368): Disabling LPT Port Support for VM.
2025-10-13 19:16:14 (18368): Disabling Audio Support for VM.
2025-10-13 19:16:15 (18368): Disabling Clipboard Support for VM.
2025-10-13 19:16:15 (18368): Disabling Drag and Drop Support for VM.
2025-10-13 19:16:15 (18368): Adding storage controller(s) to VM.
2025-10-13 19:16:15 (18368): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 19:16:18 (18368): Adding VirtualBox Guest Additions to VM.
2025-10-13 19:16:18 (18368): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 19:16:18 (18368): forwarding host port 50046 to guest port 80
2025-10-13 19:16:19 (18368): Enabling remote desktop for VM.
2025-10-13 19:16:20 (18368): Enabling shared directory for VM.
2025-10-13 19:16:20 (18368): Starting VM using VBoxManage interface. (boinc_533d1fbe40bf268f, slot#0)
2025-10-13 19:16:30 (18368): Successfully started VM. (PID = '19940')
2025-10-13 19:16:30 (18368): Reporting VM Process ID to BOINC.
2025-10-13 19:16:30 (18368): Guest Log: BIOS: VirtualBox 7.1.12
2025-10-13 19:16:30 (18368): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 19:16:30 (18368): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 19:16:30 (18368): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 19:16:30 (18368): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 19:16:30 (18368): Detected: Web Application Enabled (http://localhost:50046)
2025-10-13 19:16:30 (18368): Detected: Remote Desktop Enabled (localhost:50047)
2025-10-13 19:16:30 (18368): Preference change detected
2025-10-13 19:16:30 (18368): Setting CPU throttle for VM. (100%)
2025-10-13 19:16:30 (18368): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 19:16:32 (18368): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 19:16:32 (18368): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 19:16:36 (18368): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 19:16:36 (18368): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 19:16:36 (18368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 19:16:45 (18368): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 19:16:45 (18368): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-13 19:17:08 (18368): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 19:17:08 (18368): Guest Log: 00:00:00.000260 main     Log opened 2025-10-13T19:17:06.396782000Z
2025-10-13 19:17:08 (18368): Guest Log: 00:00:00.000518 main     OS Product: Linux
2025-10-13 19:17:08 (18368): Guest Log: 00:00:00.000596 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 19:17:08 (18368): Guest Log: 00:00:00.000664 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 19:17:08 (18368): Guest Log: 00:00:00.000732 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 19:17:08 (18368): Guest Log: 00:00:00.000735 main     Process ID: 1302
2025-10-13 19:17:08 (18368): Guest Log: 00:00:00.000737 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 19:17:08 (18368): Guest Log: 00:00:00.003529 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 19:17:08 (18368): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 19:17:08 (18368): Guest Log: [INFO] Mounting shared directory
2025-10-13 19:17:09 (18368): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 19:17:16 (18368): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 19:17:16 (18368): Guest Log: [INFO] Detected branch: prod
2025-10-13 19:17:16 (18368): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 19:17:16 (18368): Guest Log: Copying input files
2025-10-13 19:17:18 (18368): Guest Log: 00:00:10.011215 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 224 024 000ns (GuestNow=1 760 375 838 183 330 000 ns GuestLast=1 760 383 026 407 354 000 ns fSetTimeLastLoop=true )
2025-10-13 19:17:19 (18368): Guest Log: Copied input files into RunAtlas.
2025-10-13 19:17:19 (18368): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-10-13 19:17:29 (18368): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 19:17:29 (18368): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 19:17:29 (18368): Guest Log: 2.6.3.0 1578 0 31540 151668 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-10-13 19:17:31 (18368): Guest Log: copied the webapp to /var/www
2025-10-13 19:17:31 (18368): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-13 19:17:31 (18368): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-13 19:17:31 (18368): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 19:17:31 (18368): Guest Log:  *** Starting ATLAS job. (PandaID=6837334329 taskID=46676269) ***
2025-10-13 20:56:40 (18368): Status Report: Elapsed Time: '6000.000000'
2025-10-13 20:56:40 (18368): Status Report: CPU Time: '10618.125000'
2025-10-13 22:36:50 (18368): Status Report: Elapsed Time: '12000.000000'
2025-10-13 22:36:50 (18368): Status Report: CPU Time: '22406.593750'
2025-10-14 00:17:10 (18368): Status Report: Elapsed Time: '18000.785309'
2025-10-14 00:17:10 (18368): Status Report: CPU Time: '34182.781250'
2025-10-14 01:57:21 (18368): Status Report: Elapsed Time: '24000.785309'
2025-10-14 01:57:21 (18368): Status Report: CPU Time: '45974.750000'
2025-10-14 03:37:34 (18368): Status Report: Elapsed Time: '30000.785309'
2025-10-14 03:37:34 (18368): Status Report: CPU Time: '57774.109375'
2025-10-14 05:17:49 (18368): Status Report: Elapsed Time: '36000.785309'
2025-10-14 05:17:49 (18368): Status Report: CPU Time: '69556.687500'
2025-10-14 06:57:59 (18368): Status Report: Elapsed Time: '42000.785309'
2025-10-14 06:57:59 (18368): Status Report: CPU Time: '81344.843750'
2025-10-14 08:38:15 (18368): Status Report: Elapsed Time: '48000.785309'
2025-10-14 08:38:15 (18368): Status Report: CPU Time: '93141.312500'
2025-10-14 10:18:26 (18368): Status Report: Elapsed Time: '54000.785309'
2025-10-14 10:18:26 (18368): Status Report: CPU Time: '104962.156250'
2025-10-14 11:58:36 (18368): Status Report: Elapsed Time: '60000.785309'
2025-10-14 11:58:36 (18368): Status Report: CPU Time: '116789.062500'
2025-10-14 13:38:46 (18368): Status Report: Elapsed Time: '66000.785309'
2025-10-14 13:38:46 (18368): Status Report: CPU Time: '128616.328125'
2025-10-14 15:19:23 (18368): Status Report: Elapsed Time: '72001.663277'
2025-10-14 15:19:23 (18368): Status Report: CPU Time: '140485.843750'
2025-10-14 15:56:37 (18368): Guest Log:  *** Job finished ***
2025-10-14 15:56:37 (18368): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:13,820 | INFO     | all workflow threads have been joined
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:13,821 | INFO     | end of generic workflow (traces error code: 0)
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:13,821 | INFO     | traces error code: 0
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:13,822 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:30,344 | INFO     | PID=5950 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:30,345 | INFO     | found 0 job(s) in 20 queues
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:30,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:30,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:30,346 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:30,346 | INFO     | [monitor] control thread has ended
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:30,550 [wrapper] ==== pilot stdout END ====
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:30,560 [wrapper] ==== wrapper stdout RESUME ====
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:30,569 [wrapper] pilotpid: 5950
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:30,580 [wrapper] Pilot exit status: 0
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:30,645 [wrapper] pandaids: 6837334329
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:30,728 [wrapper] cleanup supervisor_pilot  9684 5951
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:30,747 [wrapper] Test setup, not cleaning
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:30,758 [wrapper] apfmon messages muted
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:30,774 [wrapper] ==== wrapper stdout END ====
2025-10-14 15:56:37 (18368): Guest Log: 2025-10-14 13:56:30,787 [wrapper] ==== wrapper stderr END ====
2025-10-14 15:56:37 (18368): Guest Log:  *** Error codes and diagnostics ***
2025-10-14 15:56:37 (18368): Guest Log:     "exeErrorCode": 0,
2025-10-14 15:56:37 (18368): Guest Log:     "exeErrorDiag": "",
2025-10-14 15:56:37 (18368): Guest Log:     "pilotErrorCode": 0,
2025-10-14 15:56:37 (18368): Guest Log:     "pilotErrorDiag": "",
2025-10-14 15:56:37 (18368): Guest Log:  *** Listing of results directory ***
2025-10-14 15:56:37 (18368): Guest Log: total 210916
2025-10-14 15:56:37 (18368): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  9 11:26 pilot3.tar.gz
2025-10-14 15:56:37 (18368): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  9 11:42 runpilot2-wrapper.sh
2025-10-14 15:56:37 (18368): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  9 11:42 queuedata.json
2025-10-14 15:56:37 (18368): Guest Log: -rwxr-xr-x. 1 atlas atlas      8446 Oct 13 17:17 init_data.xml
2025-10-14 15:56:37 (18368): Guest Log: -rwxr-xr-x. 1 atlas atlas    569673 Oct 13 17:17 input.tar.gz
2025-10-14 15:56:37 (18368): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 13 17:17 start_atlas.sh
2025-10-14 15:56:37 (18368): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 13 17:17 EVNT.46676267._000666.pool.root.1 -> /data/./ATLAS.root_0
2025-10-14 15:56:37 (18368): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Oct 13 17:17 pandaJob.out
2025-10-14 15:56:37 (18368): Guest Log: -rw-------. 1 atlas atlas    972791 Oct 13 17:18 agis_schedconf.cvmfs.json
2025-10-14 15:56:37 (18368): Guest Log: drwx------. 5 atlas atlas      4096 Oct 13 17:18 pilot3
2025-10-14 15:56:37 (18368): Guest Log: -rw-------. 1 atlas atlas 190169400 Oct 14 13:54 HITS.46676269._016165.pool.root.1
2025-10-14 15:56:37 (18368): Guest Log: -rw-------. 1 atlas atlas      1028 Oct 14 13:55 memory_monitor_summary.json
2025-10-14 15:56:37 (18368): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 14 13:55 agis_ddmendpoints.agis.ALL.json
2025-10-14 15:56:37 (18368): Guest Log: -rw-------. 1 atlas atlas   1170869 Oct 14 13:55 log.46676269._016165.job.log.tgz.1
2025-10-14 15:56:37 (18368): Guest Log: -rw-------. 1 atlas atlas        95 Oct 14 13:55 pilot_heartbeat.json
2025-10-14 15:56:37 (18368): Guest Log: -rw-------. 1 atlas atlas      7795 Oct 14 13:55 heartbeat.json
2025-10-14 15:56:37 (18368): Guest Log: -rw-------. 1 atlas atlas       744 Oct 14 13:56 pilotlog.txt
2025-10-14 15:56:37 (18368): Guest Log: -rw-------. 1 atlas atlas   9816324 Oct 14 13:56 log.46676269._016165.job.log.1
2025-10-14 15:56:37 (18368): Guest Log: -rw-------. 1 atlas atlas       357 Oct 14 13:56 output.list
2025-10-14 15:56:37 (18368): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 14 13:56 runtime_log
2025-10-14 15:56:37 (18368): Guest Log: -rw-------. 1 atlas atlas  11008000 Oct 14 13:56 result.tar.gz
2025-10-14 15:56:37 (18368): Guest Log: -rw-------. 1 atlas atlas       663 Oct 14 13:56 bnxLDmQD4Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmNnNMDmkWcFfn.diag
2025-10-14 15:56:37 (18368): Guest Log: -rw-r--r--. 1 atlas atlas      8636 Oct 14 13:56 runtime_log.err
2025-10-14 15:56:37 (18368): Guest Log: Looking for outputfile HITS.46676269._016165.pool.root.1
2025-10-14 15:56:37 (18368): Guest Log: HITS file was successfully produced
2025-10-14 15:56:37 (18368): Guest Log: -rw-------. 1 atlas atlas 190169400 Oct 14 13:54 /home/atlas/RunAtlas/HITS.46676269._016165.pool.root.1
2025-10-14 15:56:39 (18368): Guest Log: Successfully finished the ATLAS job!
2025-10-14 15:56:39 (18368): Guest Log: Copying the results back to the shared directory!
2025-10-14 15:56:39 (18368): Guest Log:  *** Contents of shared directory: ***
2025-10-14 15:56:40 (18368): Guest Log: total 414688
2025-10-14 15:56:40 (18368): Guest Log: -rwxrwxrwx. 1 root root 222851283 Oct 13 17:16 ATLAS.root_0
2025-10-14 15:56:40 (18368): Guest Log: -rwxrwxrwx. 1 root root 190169400 Oct 14 13:56 HITS.pool.root.1
2025-10-14 15:56:40 (18368): Guest Log: -rwxrwxrwx. 1 root root      8446 Oct 13 17:16 init_data.xml
2025-10-14 15:56:40 (18368): Guest Log: -rwxrwxrwx. 1 root root    569673 Oct  9 12:47 input.tar.gz
2025-10-14 15:56:40 (18368): Guest Log: -rwxrwxrwx. 1 root root  11008000 Oct 14 13:56 result.tar.gz
2025-10-14 15:56:40 (18368): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  9 12:47 start_atlas.sh
2025-10-14 15:56:40 (18368): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-14 15:56:40 (18368): VM Completion File Detected.
2025-10-14 15:56:40 (18368): Powering off VM.
2025-10-14 15:56:41 (18368): Successfully stopped VM.
2025-10-14 15:56:41 (18368): Deregistering VM. (boinc_533d1fbe40bf268f, slot#0)
2025-10-14 15:56:42 (18368): Removing network bandwidth throttle group from VM.
2025-10-14 15:56:42 (18368): Removing VM from VirtualBox.
2025-10-14 15:56:47 (18368): called boinc_finish(0)

</stderr_txt>
]]>

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