Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:54:09 (29174): wrapper (7.7.26015): starting
08:54:09 (29174): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 08:54:09] Arguments: --nthreads 8
[2025-10-09 08:54:09] Threads: 8
[2025-10-09 08:54:09] Checking for CVMFS
[2025-10-09 08:54:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 08:54:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 08:54:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 08:54:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 08:54:09] 2.11.2.0 2831 218588 77600 151512 2 59 19387823 20275200 1 130560 2 73792533 99.977 13926300 11972 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-09 08:54:09] CVMFS is ok
[2025-10-09 08:54:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 08:54:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 08:54:09] Further information can be found at the LHC@home message board.
[2025-10-09 08:54:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 08:54:09] Checking for apptainer binary...
[2025-10-09 08:54:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 08:54:09] Running /usr/bin/apptainer --version
[2025-10-09 08:54:09] apptainer version 1.3.2-1.el7
[2025-10-09 08:54:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 08:54:11] c-204-40.aglt2.org
[2025-10-09 08:54:11] apptainer works
[2025-10-09 08:54:11] Set ATHENA_PROC_NUMBER=8
[2025-10-09 08:54:11] Set ATHENA_CORE_NUMBER=8
[2025-10-09 08:54:11] Starting ATLAS job with PandaID=6837331537
[2025-10-09 08:54:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 10:58:46]  *** The last 200 lines of the pilot log: ***
[2025-10-09 10:58:46] 2025-10-09 14:57:39,489 | INFO     | PID=456 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-09 10:58:46] 2025-10-09 14:57:40,037 | INFO     | monitor loop #549: job 0:6837331537 is in state 'finished'
[2025-10-09 10:58:46] 2025-10-09 14:57:40,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 10:58:46] 2025-10-09 14:57:40,489 | INFO     | time since job start (7392s) is within the limit (172800.0s)
[2025-10-09 10:58:46] 2025-10-09 14:57:42,098 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-09 10:58:46] 2025-10-09 14:57:42,101 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-10-09 10:58:46] 2025-10-09 14:57:42,103 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837331537/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 10:58:46] 2025-10-09 14:57:42,105 | INFO     | extracted standard info from prmon json
[2025-10-09 10:58:46] 2025-10-09 14:57:42,105 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 10:58:46] 2025-10-09 14:57:42,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 10:58:46] 2025-10-09 14:57:42,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 10:58:46] 2025-10-09 14:57:42,106 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 10:58:46] 2025-10-09 14:57:42,109 | INFO     | fitting pss+swap vs Time
[2025-10-09 10:58:46] 2025-10-09 14:57:42,109 | INFO     | sum of square deviations: 549294020.0
[2025-10-09 10:58:46] 2025-10-09 14:57:42,110 | INFO     | sum of deviations: 5120047810.000002
[2025-10-09 10:58:46] 2025-10-09 14:57:42,110 | INFO     | mean x: 1760018160.0
[2025-10-09 10:58:46] 2025-10-09 14:57:42,110 | INFO     | mean y: 2480587.0330578513
[2025-10-09 10:58:46] 2025-10-09 14:57:42,110 | INFO     | -- intersect: -16402899405.394737
[2025-10-09 10:58:46] 2025-10-09 14:57:42,110 | INFO     | intersect: -16402899405.394737
[2025-10-09 10:58:46] 2025-10-09 14:57:42,111 | INFO     | chi2: 1.6376711324371775
[2025-10-09 10:58:46] 2025-10-09 14:57:42,111 | INFO     | sum of square deviations: 483971865.0
[2025-10-09 10:58:46] 2025-10-09 14:57:42,111 | INFO     | sum of deviations: 8753111552.0
[2025-10-09 10:58:46] 2025-10-09 14:57:42,111 | INFO     | mean x: 1760018007.5
[2025-10-09 10:58:46] 2025-10-09 14:57:42,112 | INFO     | mean y: 2488755.9655172415
[2025-10-09 10:58:46] 2025-10-09 14:57:42,112 | INFO     | -- intersect: -31829183841.73037
[2025-10-09 10:58:46] 2025-10-09 14:57:42,112 | INFO     | intersect: -31829183841.73037
[2025-10-09 10:58:46] 2025-10-09 14:57:42,112 | INFO     | chi2: 1.4564816831186165
[2025-10-09 10:58:46] 2025-10-09 14:57:42,112 | INFO     | current chi2=1.4564816831186165 (change=11.063848273915376 %)
[2025-10-09 10:58:46] 2025-10-09 14:57:42,112 | INFO     | right removable region: 115
[2025-10-09 10:58:46] 2025-10-09 14:57:42,113 | INFO     | sum of square deviations: 483971865.0
[2025-10-09 10:58:46] 2025-10-09 14:57:42,113 | INFO     | sum of deviations: -11556486905.000002
[2025-10-09 10:58:46] 2025-10-09 14:57:42,113 | INFO     | mean x: 1760018312.5
[2025-10-09 10:58:46] 2025-10-09 14:57:42,113 | INFO     | mean y: 2518725.8448275863
[2025-10-09 10:58:46] 2025-10-09 14:57:42,114 | INFO     | -- intersect: 42028987725.16662
[2025-10-09 10:58:46] 2025-10-09 14:57:42,114 | INFO     | intersect: 42028987725.16662
[2025-10-09 10:58:46] 2025-10-09 14:57:42,114 | INFO     | chi2: 0.2766304872645758
[2025-10-09 10:58:46] 2025-10-09 14:57:42,114 | INFO     | current chi2=0.2766304872645758 (change=83.10830045267423 %)
[2025-10-09 10:58:46] 2025-10-09 14:57:42,114 | INFO     | sum of square deviations: 424045160.0
[2025-10-09 10:58:46] 2025-10-09 14:57:42,115 | INFO     | sum of deviations: -8394321264.0
[2025-10-09 10:58:46] 2025-10-09 14:57:42,115 | INFO     | mean x: 1760018465.0
[2025-10-09 10:58:46] 2025-10-09 14:57:42,115 | INFO     | mean y: 2510614.2342342343
[2025-10-09 10:58:46] 2025-10-09 14:57:42,115 | INFO     | -- intersect: 34843517703.62571
[2025-10-09 10:58:46] 2025-10-09 14:57:42,116 | INFO     | intersect: 34843517703.62571
[2025-10-09 10:58:46] 2025-10-09 14:57:42,116 | INFO     | chi2: 0.2640428306101101
[2025-10-09 10:58:46] 2025-10-09 14:57:42,116 | INFO     | current chi2=0.2640428306101101 (change=4.550350461706913 %)
[2025-10-09 10:58:46] 2025-10-09 14:57:42,116 | INFO     | left removable region: 20
[2025-10-09 10:58:46] 2025-10-09 14:57:42,116 | INFO     | sum of square deviations: 265828240.0
[2025-10-09 10:58:46] 2025-10-09 14:57:42,117 | INFO     | sum of deviations: 1611140479.0000007
[2025-10-09 10:58:46] 2025-10-09 14:57:42,117 | INFO     | mean x: 1760018587.0
[2025-10-09 10:58:46] 2025-10-09 14:57:42,117 | INFO     | mean y: 2501350.9789473685
[2025-10-09 10:58:46] 2025-10-09 14:57:42,117 | INFO     | -- intersect: -10664676783.699614
[2025-10-09 10:58:46] 2025-10-09 14:57:42,117 | INFO     | intersect: -10664676783.699614
[2025-10-09 10:58:46] 2025-10-09 14:57:42,117 | INFO     | chi2: 0.00014445359638269405
[2025-10-09 10:58:46] 2025-10-09 14:57:42,118 | INFO     | -- intersect: -10664676783.699614
[2025-10-09 10:58:46] 2025-10-09 14:57:42,118 | INFO     | current memory leak: 6.06 B/s (using 95 data points, chi2=0.00)
[2025-10-09 10:58:46] 2025-10-09 14:57:42,118 | INFO     | could have reported an average CPU frequency of 1974 MHz (8 samples)
[2025-10-09 10:58:46] 2025-10-09 14:57:42,118 | INFO     | ..............................
[2025-10-09 10:58:46] 2025-10-09 14:57:42,118 | INFO     | . Timing measurements:
[2025-10-09 10:58:46] 2025-10-09 14:57:42,118 | INFO     | . get job = 0 s
[2025-10-09 10:58:46] 2025-10-09 14:57:42,119 | INFO     | . initial setup = 2 s
[2025-10-09 10:58:46] 2025-10-09 14:57:42,119 | INFO     | . payload setup = 8 s
[2025-10-09 10:58:46] 2025-10-09 14:57:42,119 | INFO     | . stage-in = 0 s
[2025-10-09 10:58:46] 2025-10-09 14:57:42,119 | INFO     | . payload execution = 7354 s
[2025-10-09 10:58:46] 2025-10-09 14:57:42,119 | INFO     | . stage-out = 0 s
[2025-10-09 10:58:46] 2025-10-09 14:57:42,119 | INFO     | . log creation = 0 s
[2025-10-09 10:58:46] 2025-10-09 14:57:42,119 | INFO     | ..............................
[2025-10-09 10:58:46] 2025-10-09 14:57:42,209 | INFO     | 
[2025-10-09 10:58:46] 2025-10-09 14:57:42,209 | INFO     | job summary report
[2025-10-09 10:58:46] 2025-10-09 14:57:42,209 | INFO     | --------------------------------------------------
[2025-10-09 10:58:46] 2025-10-09 14:57:42,210 | INFO     | PanDA job id: 6837331537
[2025-10-09 10:58:46] 2025-10-09 14:57:42,210 | INFO     | task id: 46676269
[2025-10-09 10:58:46] 2025-10-09 14:57:42,210 | INFO     | errors: (none)
[2025-10-09 10:58:46] 2025-10-09 14:57:42,210 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 10:58:46] 2025-10-09 14:57:42,210 | INFO     | pilot state: finished 
[2025-10-09 10:58:46] 2025-10-09 14:57:42,210 | INFO     | transexitcode: 0
[2025-10-09 10:58:46] 2025-10-09 14:57:42,211 | INFO     | exeerrorcode: 0
[2025-10-09 10:58:46] 2025-10-09 14:57:42,211 | INFO     | exeerrordiag: 
[2025-10-09 10:58:46] 2025-10-09 14:57:42,211 | INFO     | exitcode: 0
[2025-10-09 10:58:46] 2025-10-09 14:57:42,211 | INFO     | exitmsg: OK
[2025-10-09 10:58:46] 2025-10-09 14:57:42,211 | INFO     | cpuconsumptiontime: 55218 s
[2025-10-09 10:58:46] 2025-10-09 14:57:42,212 | INFO     | nevents: 400
[2025-10-09 10:58:46] 2025-10-09 14:57:42,212 | INFO     | neventsw: 0
[2025-10-09 10:58:46] 2025-10-09 14:57:42,212 | INFO     | pid: 6987
[2025-10-09 10:58:46] 2025-10-09 14:57:42,212 | INFO     | pgrp: 6987
[2025-10-09 10:58:46] 2025-10-09 14:57:42,212 | INFO     | corecount: 8
[2025-10-09 10:58:46] 2025-10-09 14:57:42,212 | INFO     | event service: False
[2025-10-09 10:58:46] 2025-10-09 14:57:42,213 | INFO     | sizes: {0: 2348679, 1: 2348878, 6: 2349140, 11: 2349168, 7366: 2376525, 7367: 2385523, 7369: 2385707, 7376: 2385901}
[2025-10-09 10:58:46] 2025-10-09 14:57:42,213 | INFO     | --------------------------------------------------
[2025-10-09 10:58:46] 2025-10-09 14:57:42,213 | INFO     | 
[2025-10-09 10:58:46] 2025-10-09 14:57:42,213 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-09 10:58:46] 2025-10-09 14:57:42,243 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,243 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,243 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,244 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,244 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,244 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,244 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,244 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,245 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,245 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,245 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,245 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,245 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,246 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,246 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,246 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,246 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,246 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 10:58:46] 2025-10-09 14:57:42,246 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,247 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 10:58:46] 2025-10-09 14:57:42,247 | INFO     | job 6837331537 has completed (purged errors)
[2025-10-09 10:58:46] 2025-10-09 14:57:42,247 | INFO     | overall cleanup function is called
[2025-10-09 10:58:46] 2025-10-09 14:57:43,255 | INFO     | --- collectZombieJob: --- 10, [6987]
[2025-10-09 10:58:46] 2025-10-09 14:57:43,255 | INFO     | zombie collector waiting for pid 6987
[2025-10-09 10:58:46] 2025-10-09 14:57:43,256 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 10:58:46] 2025-10-09 14:57:43,256 | INFO     | collected zombie processes
[2025-10-09 10:58:46] 2025-10-09 14:57:43,256 | INFO     | will attempt to kill all subprocesses of pid=6987
[2025-10-09 10:58:46] 2025-10-09 14:57:43,346 | INFO     | process IDs to be killed: [6987] (in reverse order)
[2025-10-09 10:58:46] 2025-10-09 14:57:43,400 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 10:58:46] 2025-10-09 14:57:43,401 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 10:58:46] 2025-10-09 14:57:43,405 | INFO     | did not find any defunct processes belonging to 6987
[2025-10-09 10:58:46] 2025-10-09 14:57:43,409 | INFO     | did not find any defunct processes belonging to 6987
[2025-10-09 10:58:46] 2025-10-09 14:57:43,409 | INFO     | ready for new job
[2025-10-09 10:58:46] 2025-10-09 14:57:43,409 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 10:58:46] 2025-10-09 14:57:43,411 | INFO     | ***************************************
[2025-10-09 10:58:46] 2025-10-09 14:57:43,411 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 10:58:46] 2025-10-09 14:57:43,411 | INFO     | ***************************************
[2025-10-09 10:58:46] 2025-10-09 14:57:43,411 | INFO     | 
[2025-10-09 10:58:46] 2025-10-09 14:57:43,411 | INFO     | architecture information:
[2025-10-09 10:58:46] 2025-10-09 14:57:43,412 | INFO     | executing command: cat /etc/os-release
[2025-10-09 10:58:46] 2025-10-09 14:57:43,428 | INFO     | cat /etc/os-release:
[2025-10-09 10:58:46] NAME="CentOS Linux"
[2025-10-09 10:58:46] VERSION="7 (Core)"
[2025-10-09 10:58:46] ID="centos"
[2025-10-09 10:58:46] ID_LIKE="rhel fedora"
[2025-10-09 10:58:46] VERSION_ID="7"
[2025-10-09 10:58:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 10:58:46] ANSI_COLOR="0;31"
[2025-10-09 10:58:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 10:58:46] HOME_URL="https://www.centos.org/"
[2025-10-09 10:58:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 10:58:46] 
[2025-10-09 10:58:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 10:58:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 10:58:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 10:58:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 10:58:46] 
[2025-10-09 10:58:46] 2025-10-09 14:57:43,429 | INFO     | ***************************************
[2025-10-09 10:58:46] 2025-10-09 14:57:43,932 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-09 10:58:46] 2025-10-09 14:57:43,951 | INFO     | sufficient remaining disk space (18555600896 B)
[2025-10-09 10:58:46] 2025-10-09 14:57:43,952 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 10:58:46] 2025-10-09 14:57:43,952 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 10:58:46] 2025-10-09 14:57:43,952 | INFO     | update_server=False
[2025-10-09 10:58:46] 2025-10-09 14:57:43,952 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 10:58:46] 2025-10-09 14:57:43,953 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 10:58:46] 2025-10-09 14:57:43,953 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 10:58:46] 2025-10-09 14:57:43,953 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 10:58:46] 2025-10-09 14:57:43,954 | INFO     | aborting loop
[2025-10-09 10:58:46] 2025-10-09 14:57:44,428 | INFO     | all payload control threads have been joined
[2025-10-09 10:58:46] 2025-10-09 14:57:44,958 | INFO     | [job] retrieve thread has finished
[2025-10-09 10:58:46] 2025-10-09 14:57:44,959 | INFO     | [job] queue monitor thread has finished
[2025-10-09 10:58:46] 2025-10-09 14:57:44,960 | INFO     | [job] job monitor thread has finished
[2025-10-09 10:58:46] 2025-10-09 14:57:44,986 | INFO     | all data control threads have been joined
[2025-10-09 10:58:46] 2025-10-09 14:57:45,064 | INFO     | all job control threads have been joined
[2025-10-09 10:58:46] 2025-10-09 14:57:45,075 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 10:58:46] 2025-10-09 14:57:45,434 | INFO     | [payload] control thread has finished
[2025-10-09 10:58:46] 2025-10-09 14:57:45,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 10:58:46] 2025-10-09 14:57:45,551 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 10:58:46] 2025-10-09 14:57:45,558 | INFO     | [payload] validate_post thread has finished
[2025-10-09 10:58:46] 2025-10-09 14:57:45,823 | INFO     | [payload] failed_post thread has finished
[2025-10-09 10:58:46] 2025-10-09 14:57:45,958 | INFO     | [data] copytool_out thread has finished
[2025-10-09 10:58:46] 2025-10-09 14:57:45,991 | INFO     | [data] control thread has finished
[2025-10-09 10:58:46] 2025-10-09 14:57:46,069 | INFO     | [job] control thread has finished
[2025-10-09 10:58:46] 2025-10-09 14:57:46,220 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 10:58:46] 2025-10-09 14:57:46,221 | INFO     | [job] validate thread has finished
[2025-10-09 10:58:46] 2025-10-09 14:57:46,228 | INFO     | [data] copytool_in thread has finished
[2025-10-09 10:58:46] 2025-10-09 14:57:46,255 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 10:58:46] 2025-10-09 14:57:49,444 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 10:58:46] 2025-10-09 14:58:13,711 | INFO     | PID=456 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-09 10:58:46] 2025-10-09 14:58:13,711 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 10:58:46] 2025-10-09 14:58:13,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 10:58:46] 2025-10-09 14:58:13,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 10:58:46] 2025-10-09 14:58:40,204 | INFO     | [monitor] cgroup control has ended
[2025-10-09 10:58:46] 2025-10-09 14:58:41,368 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140223677249344)>', '<ExcThread(monitor, started 140222947907328)>']
[2025-10-09 10:58:46] 2025-10-09 14:58:41,836 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 10:58:46] 2025-10-09 14:58:41,837 | INFO     | [monitor] control thread has ended
[2025-10-09 10:58:46] 2025-10-09 14:58:46,370 | INFO     | all workflow threads have been joined
[2025-10-09 10:58:46] 2025-10-09 14:58:46,371 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 10:58:46] 2025-10-09 14:58:46,371 | INFO     | traces error code: 0
[2025-10-09 10:58:46] 2025-10-09 14:58:46,372 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 10:58:46] 2025-10-09 14:58:46,478 [wrapper] ==== pilot stdout END ====
[2025-10-09 10:58:46] 2025-10-09 14:58:46,483 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 10:58:46] 2025-10-09 14:58:46,488 [wrapper] pilotpid: 456
[2025-10-09 10:58:46] 2025-10-09 14:58:46,493 [wrapper] Pilot exit status: 0
[2025-10-09 10:58:46] 2025-10-09 14:58:46,512 [wrapper] pandaids: 6837331537
[2025-10-09 10:58:46] 2025-10-09 14:58:46,566 [wrapper] cleanup supervisor_pilot  9152 457
[2025-10-09 10:58:46] 2025-10-09 14:58:46,571 [wrapper] Test setup, not cleaning
[2025-10-09 10:58:46] 2025-10-09 14:58:46,576 [wrapper] apfmon messages muted
[2025-10-09 10:58:46] 2025-10-09 14:58:46,581 [wrapper] ==== wrapper stdout END ====
[2025-10-09 10:58:46] 2025-10-09 14:58:46,586 [wrapper] ==== wrapper stderr END ====
[2025-10-09 10:58:46]  *** Error codes and diagnostics ***
[2025-10-09 10:58:46]     "exeErrorCode": 0,
[2025-10-09 10:58:46]     "exeErrorDiag": "",
[2025-10-09 10:58:46]     "pilotErrorCode": 0,
[2025-10-09 10:58:46]     "pilotErrorDiag": "",
[2025-10-09 10:58:46]  *** Listing of results directory ***
[2025-10-09 10:58:46] total 410712
[2025-10-09 10:58:46] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 06:27 pilot3.tar.gz
[2025-10-09 10:58:46] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 06:51 queuedata.json
[2025-10-09 10:58:46] -rwx------ 1 boincer umatlas     36292 Oct  9 06:51 runpilot2-wrapper.sh
[2025-10-09 10:58:46] -rw-r--r-- 1 boincer umatlas       100 Oct  9 08:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 10:58:46] -rwxr-xr-x 1 boincer umatlas      7986 Oct  9 08:54 run_atlas
[2025-10-09 10:58:46] -rw-r--r-- 1 boincer umatlas       105 Oct  9 08:54 job.xml
[2025-10-09 10:58:46] -rw-r--r-- 2 boincer umatlas 221349022 Oct  9 08:54 EVNT.46676267._000609.pool.root.1
[2025-10-09 10:58:46] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 08:54 start_atlas.sh
[2025-10-09 10:58:46] drwxrwx--x 2 boincer umatlas      4096 Oct  9 08:54 shared
[2025-10-09 10:58:46] -rw-r--r-- 2 boincer umatlas    569676 Oct  9 08:54 input.tar.gz
[2025-10-09 10:58:46] -rw-r--r-- 1 boincer umatlas         0 Oct  9 08:54 boinc_lockfile
[2025-10-09 10:58:46] -rw-r--r-- 1 boincer umatlas      2547 Oct  9 08:54 pandaJob.out
[2025-10-09 10:58:46] -rw------- 1 boincer umatlas    975454 Oct  9 08:54 agis_schedconf.cvmfs.json
[2025-10-09 10:58:46] -rw------- 1 boincer umatlas   1560401 Oct  9 08:54 agis_ddmendpoints.agis.ALL.json
[2025-10-09 10:58:46] drwx------ 5 boincer umatlas      4096 Oct  9 08:54 pilot3
[2025-10-09 10:58:46] -rw------- 1 boincer umatlas 192535464 Oct  9 10:56 HITS.46676269._014853.pool.root.1
[2025-10-09 10:58:46] -rw------- 1 boincer umatlas        95 Oct  9 10:57 pilot_heartbeat.json
[2025-10-09 10:58:46] -rw-r--r-- 1 boincer umatlas       529 Oct  9 10:57 boinc_task_state.xml
[2025-10-09 10:58:46] -rw------- 1 boincer umatlas      1051 Oct  9 10:57 memory_monitor_summary.json
[2025-10-09 10:58:46] -rw------- 1 boincer umatlas    348284 Oct  9 10:57 log.46676269._014853.job.log.tgz.1
[2025-10-09 10:58:46] -rw------- 1 boincer umatlas      7840 Oct  9 10:57 heartbeat.json
[2025-10-09 10:58:46] -rw-r--r-- 1 boincer umatlas      5910 Oct  9 10:58 init_data.xml
[2025-10-09 10:58:46] -rw-r--r-- 1 boincer umatlas        27 Oct  9 10:58 wrapper_checkpoint.txt
[2025-10-09 10:58:46] -rw-r--r-- 1 boincer umatlas      8192 Oct  9 10:58 boinc_mmap_file
[2025-10-09 10:58:46] -rw------- 1 boincer umatlas      4744 Oct  9 10:58 pilotlog.txt
[2025-10-09 10:58:46] -rw------- 1 boincer umatlas   1042326 Oct  9 10:58 log.46676269._014853.job.log.1
[2025-10-09 10:58:46] -rw------- 1 boincer umatlas       357 Oct  9 10:58 output.list
[2025-10-09 10:58:46] -rw-r--r-- 1 boincer umatlas       620 Oct  9 10:58 runtime_log
[2025-10-09 10:58:46] -rw------- 1 boincer umatlas   1413120 Oct  9 10:58 result.tar.gz
[2025-10-09 10:58:46] -rw-r--r-- 1 boincer umatlas      8703 Oct  9 10:58 runtime_log.err
[2025-10-09 10:58:46] -rw------- 1 boincer umatlas       659 Oct  9 10:58 D7NLDmhQ3Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmPZNMDmV8qf0n.diag
[2025-10-09 10:58:46] -rw-r--r-- 1 boincer umatlas     21202 Oct  9 10:58 stderr.txt
[2025-10-09 10:58:46] HITS file was successfully produced:
[2025-10-09 10:58:46] -rw------- 1 boincer umatlas 192535464 Oct  9 10:56 shared/HITS.pool.root.1
[2025-10-09 10:58:46]  *** Contents of shared directory: ***
[2025-10-09 10:58:46] total 406148
[2025-10-09 10:58:46] -rw-r--r-- 2 boincer umatlas 221349022 Oct  9 08:54 ATLAS.root_0
[2025-10-09 10:58:46] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 08:54 start_atlas.sh
[2025-10-09 10:58:46] -rw-r--r-- 2 boincer umatlas    569676 Oct  9 08:54 input.tar.gz
[2025-10-09 10:58:46] -rw------- 1 boincer umatlas 192535464 Oct  9 10:56 HITS.pool.root.1
[2025-10-09 10:58:46] -rw------- 1 boincer umatlas   1413120 Oct  9 10:58 result.tar.gz
10:58:48 (29174): run_atlas exited; CPU time 55172.818328
10:58:48 (29174): called boinc_finish(0)

</stderr_txt>
]]>

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