Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:47:22 (1346501): wrapper (7.7.26015): starting
05:47:22 (1346501): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 05:47:22] Arguments: --nthreads 8
[2025-10-09 05:47:22] Threads: 8
[2025-10-09 05:47:22] Checking for CVMFS
[2025-10-09 05:47:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 05:47:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 05:47:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 05:47:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 05:47:23] 2.11.3.0 1872 25619 151224 151512 2 321 45272903 45568001 15519 130560 0 155215966 99.871 62801184 22532 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-09 05:47:23] CVMFS is ok
[2025-10-09 05:47:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 05:47:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 05:47:23] Further information can be found at the LHC@home message board.
[2025-10-09 05:47:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 05:47:23] Checking for apptainer binary...
[2025-10-09 05:47:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 05:47:23] Running /usr/bin/apptainer --version
[2025-10-09 05:47:23] apptainer version 1.4.1-1.el9
[2025-10-09 05:47:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 05:47:23] wns0012.triumf.lcg
[2025-10-09 05:47:23] apptainer works
[2025-10-09 05:47:23] Set ATHENA_PROC_NUMBER=8
[2025-10-09 05:47:23] Set ATHENA_CORE_NUMBER=8
[2025-10-09 05:47:24] Starting ATLAS job with PandaID=6837328498
[2025-10-09 05:47:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 05:53:01]  *** The last 200 lines of the pilot log: ***
[2025-10-09 05:53:01] 2025-10-09 12:52:01,610 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 05:53:01] 2025-10-09 12:52:01,610 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 05:53:01] 2025-10-09 12:52:01,610 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 05:53:01] 2025-10-09 12:52:01,610 | WARNING  | wrong length of table data, x=[1760014152.0], y=[1000.0] (must be same and length>=4)
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | ..............................
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . Timing measurements:
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . get job = 0 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . initial setup = 4 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . payload setup = 18 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . stage-in = 0 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . payload execution = 57 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . stage-out = 0 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . log creation = 0 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | ..............................
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 05:53:01] 2025-10-09 12:52:01,612 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837328498/pilotlog.txt
[2025-10-09 05:53:01] 2025-10-09 12:52:01,624 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-09 05:53:01] - Log from pilotlog.txt -
[2025-10-09 05:53:01] 2025-10-09 12:52:01,608 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837328498/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 05:53:01] 2025-10-09 12:52:01,609 | INFO     | extracted standard info from prmon json
[2025-10-09 05:53:01] 2025-10-09 12:52:01,609 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 05:53:01] 2025-10-09 12:52:01,610 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 05:53:01] 2025-10-09 12:52:01,610 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 05:53:01] 2025-10-09 12:52:01,610 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 05:53:01] 2025-10-09 12:52:01,610 | WARNING  | wrong length of table data, x=[1760014152.0], y=[1000.0] (must be same and length>=4)
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | ..............................
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . Timing measurements:
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . get job = 0 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . initial setup = 4 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . payload setup = 18 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . stage-in = 0 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . payload execution = 57 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . stage-out = 0 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . log creation = 0 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | ..............................
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 05:53:01] 2025-10-09 12:52:01,612 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837328498/pilotlog.txt
[2025-10-09 05:53:01] 2025-10-09 12:52:01,624 | WARNING  | 
[2025-10-09 05:53:01] [begin log extracts]
[2025-10-09 05:53:01] - Log from pilotlog.txt -
[2025-10-09 05:53:01] 2025-10-09 12:52:01,608 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837328498/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 05:53:01] 2025-10-09 12:52:01,609 | INFO     | extracted standard info from prmon json
[2025-10-09 05:53:01] 2025-10-09 12:52:01,609 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 05:53:01] 2025-10-09 12:52:01,610 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 05:53:01] 2025-10-09 12:52:01,610 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 05:53:01] 2025-10-09 12:52:01,610 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 05:53:01] 2025-10-09 12:52:01,610 | WARNING  | wrong length of table data, x=[1760014152.0], y=[1000.0] (must be same and length>=4)
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | ..............................
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . Timing measurements:
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . get job = 0 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . initial setup = 4 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . payload setup = 18 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . stage-in = 0 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . payload execution = 57 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . stage-out = 0 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | . log creation = 0 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | ..............................
[2025-10-09 05:53:01] 2025-10-09 12:52:01,611 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 05:53:01] 2025-10-09 12:52:01,612 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837328498/pilotlog.txt
[2025-10-09 05:53:01] [end log extracts]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,624 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-09 05:53:01] 2025-10-09 12:52:01,625 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-09 05:53:01] 2025-10-09 12:52:01,719 | INFO     | 
[2025-10-09 05:53:01] 2025-10-09 12:52:01,720 | INFO     | job summary report
[2025-10-09 05:53:01] 2025-10-09 12:52:01,720 | INFO     | --------------------------------------------------
[2025-10-09 05:53:01] 2025-10-09 12:52:01,720 | INFO     | PanDA job id: 6837328498
[2025-10-09 05:53:01] 2025-10-09 12:52:01,720 | INFO     | task id: 46676269
[2025-10-09 05:53:01] 2025-10-09 12:52:01,720 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-09 05:49:38,692 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-09 05:53:01] 2025-10-09 12:52:01,721 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 05:53:01] 2025-10-09 12:52:01,721 | INFO     | pilot state: failed 
[2025-10-09 05:53:01] 2025-10-09 12:52:01,721 | INFO     | transexitcode: 65
[2025-10-09 05:53:01] 2025-10-09 12:52:01,721 | INFO     | exeerrorcode: 65
[2025-10-09 05:53:01] 2025-10-09 12:52:01,721 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 05:53:01] 2025-10-09 12:52:01,721 | INFO     | exitcode: 65
[2025-10-09 05:53:01] 2025-10-09 12:52:01,721 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 05:53:01] 2025-10-09 12:52:01,721 | INFO     | cpuconsumptiontime: 19 s
[2025-10-09 05:53:01] 2025-10-09 12:52:01,721 | INFO     | nevents: 0
[2025-10-09 05:53:01] 2025-10-09 12:52:01,721 | INFO     | neventsw: 0
[2025-10-09 05:53:01] 2025-10-09 12:52:01,721 | INFO     | pid: 1356868
[2025-10-09 05:53:01] 2025-10-09 12:52:01,721 | INFO     | pgrp: 1356868
[2025-10-09 05:53:01] 2025-10-09 12:52:01,721 | INFO     | corecount: 8
[2025-10-09 05:53:01] 2025-10-09 12:52:01,722 | INFO     | event service: False
[2025-10-09 05:53:01] 2025-10-09 12:52:01,722 | INFO     | sizes: {0: 2348852, 11: 2348852, 14: 2349142, 22: 2349170, 80: 2372535, 81: 2372511, 82: 2377015, 212: 2377153}
[2025-10-09 05:53:01] 2025-10-09 12:52:01,722 | INFO     | --------------------------------------------------
[2025-10-09 05:53:01] 2025-10-09 12:52:01,722 | INFO     | 
[2025-10-09 05:53:01] 2025-10-09 12:52:01,722 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-09 05:53:01] 2025-10-09 12:52:01,743 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,744 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,744 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,744 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,744 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,744 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,744 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,744 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,744 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,744 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,745 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,745 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,745 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,745 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,745 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 05:53:01] 2025-10-09 12:52:01,745 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,745 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 05:53:01] 2025-10-09 12:52:01,745 | INFO     | job 6837328498 has completed (purged errors)
[2025-10-09 05:53:01] 2025-10-09 12:52:01,745 | INFO     | overall cleanup function is called
[2025-10-09 05:53:01] 2025-10-09 12:52:02,752 | INFO     | --- collectZombieJob: --- 10, [1356868]
[2025-10-09 05:53:01] 2025-10-09 12:52:02,752 | INFO     | zombie collector waiting for pid 1356868
[2025-10-09 05:53:01] 2025-10-09 12:52:02,752 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 05:53:01] 2025-10-09 12:52:02,752 | INFO     | collected zombie processes
[2025-10-09 05:53:01] 2025-10-09 12:52:02,752 | INFO     | will attempt to kill all subprocesses of pid=1356868
[2025-10-09 05:53:01] 2025-10-09 12:52:03,128 | INFO     | process IDs to be killed: [1356868] (in reverse order)
[2025-10-09 05:53:01] 2025-10-09 12:52:03,190 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 05:53:01] 2025-10-09 12:52:03,191 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 05:53:01] 2025-10-09 12:52:03,198 | INFO     | did not find any defunct processes belonging to 1356868
[2025-10-09 05:53:01] 2025-10-09 12:52:03,205 | INFO     | did not find any defunct processes belonging to 1356868
[2025-10-09 05:53:01] 2025-10-09 12:52:03,205 | INFO     | ready for new job
[2025-10-09 05:53:01] 2025-10-09 12:52:03,206 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 05:53:01] 2025-10-09 12:52:03,207 | INFO     | ***************************************
[2025-10-09 05:53:01] 2025-10-09 12:52:03,207 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 05:53:01] 2025-10-09 12:52:03,207 | INFO     | ***************************************
[2025-10-09 05:53:01] 2025-10-09 12:52:03,207 | INFO     | 
[2025-10-09 05:53:01] 2025-10-09 12:52:03,208 | INFO     | architecture information:
[2025-10-09 05:53:01] 2025-10-09 12:52:03,209 | INFO     | executing command: cat /etc/os-release
[2025-10-09 05:53:01] 2025-10-09 12:52:03,221 | INFO     | cat /etc/os-release:
[2025-10-09 05:53:01] NAME="CentOS Linux"
[2025-10-09 05:53:01] VERSION="7 (Core)"
[2025-10-09 05:53:01] ID="centos"
[2025-10-09 05:53:01] ID_LIKE="rhel fedora"
[2025-10-09 05:53:01] VERSION_ID="7"
[2025-10-09 05:53:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 05:53:01] ANSI_COLOR="0;31"
[2025-10-09 05:53:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 05:53:01] HOME_URL="https://www.centos.org/"
[2025-10-09 05:53:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 05:53:01] 
[2025-10-09 05:53:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 05:53:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 05:53:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 05:53:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 05:53:01] 
[2025-10-09 05:53:01] 2025-10-09 12:52:03,221 | INFO     | ***************************************
[2025-10-09 05:53:01] 2025-10-09 12:52:03,727 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-09 05:53:01] 2025-10-09 12:52:03,741 | INFO     | sufficient remaining disk space (1160690794496 B)
[2025-10-09 05:53:01] 2025-10-09 12:52:03,742 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 05:53:01] 2025-10-09 12:52:03,742 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 05:53:01] 2025-10-09 12:52:03,742 | INFO     | update_server=False
[2025-10-09 05:53:01] 2025-10-09 12:52:03,742 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 05:53:01] 2025-10-09 12:52:03,742 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 05:53:01] 2025-10-09 12:52:03,999 | INFO     | all payload control threads have been joined
[2025-10-09 05:53:01] 2025-10-09 12:52:04,253 | INFO     | all data control threads have been joined
[2025-10-09 05:53:01] 2025-10-09 12:52:04,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 05:53:01] 2025-10-09 12:52:04,413 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 05:53:01] 2025-10-09 12:52:04,413 | INFO     | aborting loop
[2025-10-09 05:53:01] 2025-10-09 12:52:04,592 | INFO     | all job control threads have been joined
[2025-10-09 05:53:01] 2025-10-09 12:52:04,748 | INFO     | [job] retrieve thread has finished
[2025-10-09 05:53:01] 2025-10-09 12:52:05,006 | INFO     | [payload] control thread has finished
[2025-10-09 05:53:01] 2025-10-09 12:52:05,193 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 05:53:01] 2025-10-09 12:52:05,259 | INFO     | [data] control thread has finished
[2025-10-09 05:53:01] 2025-10-09 12:52:05,419 | INFO     | [job] job monitor thread has finished
[2025-10-09 05:53:01] 2025-10-09 12:52:05,513 | INFO     | [payload] failed_post thread has finished
[2025-10-09 05:53:01] 2025-10-09 12:52:05,525 | INFO     | [data] copytool_in thread has finished
[2025-10-09 05:53:01] 2025-10-09 12:52:05,598 | INFO     | [job] control thread has finished
[2025-10-09 05:53:01] 2025-10-09 12:52:05,730 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 05:53:01] 2025-10-09 12:52:05,751 | INFO     | [data] copytool_out thread has finished
[2025-10-09 05:53:01] 2025-10-09 12:52:05,969 | INFO     | [job] validate thread has finished
[2025-10-09 05:53:01] 2025-10-09 12:52:06,032 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 05:53:01] 2025-10-09 12:52:06,124 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 05:53:01] 2025-10-09 12:52:06,139 | INFO     | [payload] validate_post thread has finished
[2025-10-09 05:53:01] 2025-10-09 12:52:06,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 05:53:01] 2025-10-09 12:52:07,717 | INFO     | [job] queue monitor thread has finished
[2025-10-09 05:53:01] 2025-10-09 12:52:08,386 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 05:53:01] 2025-10-09 12:52:33,433 | INFO     | PID=1350216 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 05:53:01] 2025-10-09 12:52:33,433 | INFO     | .. there are 26 such processes running
[2025-10-09 05:53:01] 2025-10-09 12:52:33,433 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 05:53:01] 2025-10-09 12:52:33,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 05:53:01] 2025-10-09 12:52:33,434 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 05:53:01] 2025-10-09 12:52:55,778 | INFO     | [monitor] cgroup control has ended
[2025-10-09 05:53:01] 2025-10-09 12:52:56,120 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140129351313216)>', '<ExcThread(monitor, started 140129022740224)>']
[2025-10-09 05:53:01] 2025-10-09 12:52:56,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 05:53:01] 2025-10-09 12:52:56,583 | INFO     | [monitor] control thread has ended
[2025-10-09 05:53:01] 2025-10-09 12:53:01,145 | INFO     | all workflow threads have been joined
[2025-10-09 05:53:01] 2025-10-09 12:53:01,146 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 05:53:01] 2025-10-09 12:53:01,147 | INFO     | traces error code: 0
[2025-10-09 05:53:01] 2025-10-09 12:53:01,147 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 05:53:01] 2025-10-09 12:53:01,683 [wrapper] ==== pilot stdout END ====
[2025-10-09 05:53:01] 2025-10-09 12:53:01,686 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 05:53:01] 2025-10-09 12:53:01,687 [wrapper] pilotpid: 1350216
[2025-10-09 05:53:01] 2025-10-09 12:53:01,689 [wrapper] Pilot exit status: 0
[2025-10-09 05:53:01] 2025-10-09 12:53:01,716 [wrapper] pandaids: 6837328498
[2025-10-09 05:53:01] 2025-10-09 12:53:01,759 [wrapper] cleanup supervisor_pilot 1350222 1350217
[2025-10-09 05:53:01] 2025-10-09 12:53:01,761 [wrapper] Test setup, not cleaning
[2025-10-09 05:53:01] 2025-10-09 12:53:01,763 [wrapper] apfmon messages muted
[2025-10-09 05:53:01] 2025-10-09 12:53:01,765 [wrapper] ==== wrapper stdout END ====
[2025-10-09 05:53:01] 2025-10-09 12:53:01,766 [wrapper] ==== wrapper stderr END ====
[2025-10-09 05:53:01]  *** Error codes and diagnostics ***
[2025-10-09 05:53:01]     "exeErrorCode": 65,
[2025-10-09 05:53:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 05:53:01]     "pilotErrorCode": 1305,
[2025-10-09 05:53:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 05:53:01]  *** Listing of results directory ***
[2025-10-09 05:53:01] total 220412
[2025-10-09 05:53:01] -rw-r--r--. 1 boinc boinc    557409 Oct  9 03:27 pilot3.tar.gz
[2025-10-09 05:53:01] -rwx------. 1 boinc boinc     36292 Oct  9 03:43 runpilot2-wrapper.sh
[2025-10-09 05:53:01] -rw-r--r--. 1 boinc boinc      5112 Oct  9 03:46 queuedata.json
[2025-10-09 05:53:01] -rw-r--r--. 1 boinc boinc       100 Oct  9 05:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 05:53:01] -rwxr-xr-x. 1 boinc boinc      7986 Oct  9 05:47 run_atlas
[2025-10-09 05:53:01] -rw-r--r--. 1 boinc boinc       105 Oct  9 05:47 job.xml
[2025-10-09 05:53:01] -rw-r--r--. 1 boinc boinc      6444 Oct  9 05:47 init_data.xml
[2025-10-09 05:53:01] -rw-r--r--. 2 boinc boinc 221573651 Oct  9 05:47 EVNT.46676267._000563.pool.root.1
[2025-10-09 05:53:01] -rw-r--r--. 2 boinc boinc     15120 Oct  9 05:47 start_atlas.sh
[2025-10-09 05:53:01] drwxrwx--x. 2 boinc boinc      4096 Oct  9 05:47 shared
[2025-10-09 05:53:01] -rw-r--r--. 2 boinc boinc    569681 Oct  9 05:47 input.tar.gz
[2025-10-09 05:53:01] -rw-r--r--. 1 boinc boinc         0 Oct  9 05:47 boinc_lockfile
[2025-10-09 05:53:01] -rw-r--r--. 1 boinc boinc      2549 Oct  9 05:47 pandaJob.out
[2025-10-09 05:53:01] -rw-------. 1 boinc boinc    975454 Oct  9 05:47 agis_schedconf.cvmfs.json
[2025-10-09 05:53:01] -rw-------. 1 boinc boinc   1560401 Oct  9 05:47 agis_ddmendpoints.agis.ALL.json
[2025-10-09 05:53:01] drwx------. 5 boinc boinc      4096 Oct  9 05:47 pilot3
[2025-10-09 05:53:01] -rw-r--r--. 1 boinc boinc       524 Oct  9 05:49 boinc_task_state.xml
[2025-10-09 05:53:01] -rw-------. 1 boinc boinc       959 Oct  9 05:49 memory_monitor_summary.json
[2025-10-09 05:53:01] -rw-------. 1 boinc boinc     22279 Oct  9 05:49 log.46676269._013761.job.log.tgz.1
[2025-10-09 05:53:01] -rw-------. 1 boinc boinc        95 Oct  9 05:51 pilot_heartbeat.json
[2025-10-09 05:53:01] -rw-------. 1 boinc boinc      8376 Oct  9 05:52 heartbeat.json
[2025-10-09 05:53:01] -rw-------. 1 boinc boinc      4823 Oct  9 05:53 pilotlog.txt
[2025-10-09 05:53:01] -rw-r--r--. 1 boinc boinc      8192 Oct  9 05:53 boinc_mmap_file
[2025-10-09 05:53:01] -rw-r--r--. 1 boinc boinc        23 Oct  9 05:53 wrapper_checkpoint.txt
[2025-10-09 05:53:01] -rw-------. 1 boinc boinc     92457 Oct  9 05:53 log.46676269._013761.job.log.1
[2025-10-09 05:53:01] -rw-------. 1 boinc boinc       188 Oct  9 05:53 output.list
[2025-10-09 05:53:01] -rw-r--r--. 1 boinc boinc       620 Oct  9 05:53 runtime_log
[2025-10-09 05:53:01] -rw-------. 1 boinc boinc    133120 Oct  9 05:53 result.tar.gz
[2025-10-09 05:53:01] -rw-r--r--. 1 boinc boinc      8526 Oct  9 05:53 runtime_log.err
[2025-10-09 05:53:01] -rw-------. 1 boinc boinc       644 Oct  9 05:53 4LXNDmxI3Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDGZNDmhED7Tn.diag
[2025-10-09 05:53:01] -rw-r--r--. 1 boinc boinc     21784 Oct  9 05:53 stderr.txt
[2025-10-09 05:53:01] No HITS result produced
[2025-10-09 05:53:01]  *** Contents of shared directory: ***
[2025-10-09 05:53:01] total 217092
[2025-10-09 05:53:01] -rw-r--r--. 2 boinc boinc 221573651 Oct  9 05:47 ATLAS.root_0
[2025-10-09 05:53:01] -rw-r--r--. 2 boinc boinc     15120 Oct  9 05:47 start_atlas.sh
[2025-10-09 05:53:01] -rw-r--r--. 2 boinc boinc    569681 Oct  9 05:47 input.tar.gz
[2025-10-09 05:53:01] -rw-------. 1 boinc boinc    133120 Oct  9 05:53 result.tar.gz
05:53:03 (1346501): run_atlas exited; CPU time 30.081757
05:53:03 (1346501): called boinc_finish(0)

</stderr_txt>
]]>

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