Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-09 14:55:39 (947356): vboxwrapper version 26210
2025-10-09 14:55:39 (947356): BOINC client version: 8.2.5
2025-10-09 14:55:40 (947356): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-10-09 14:55:40 (947356): Successfully copied 'init_data.xml' to the shared directory.
2025-10-09 14:55:40 (947356): Create VM. (boinc_7c2efba1ca01a174, slot#2)
2025-10-09 14:55:40 (947356): Setting Memory Size for VM. (4096MB)
2025-10-09 14:55:40 (947356): Setting CPU Count for VM. (1)
2025-10-09 14:55:41 (947356): Setting Chipset Options for VM.
2025-10-09 14:55:41 (947356): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-09 14:55:41 (947356): Setting Boot Options for VM.
2025-10-09 14:55:41 (947356): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-09 14:55:41 (947356): Enabling VM Network Access.
2025-10-09 14:55:41 (947356): Disabling USB Support for VM.
2025-10-09 14:55:42 (947356): Disabling COM Port Support for VM.
2025-10-09 14:55:42 (947356): Disabling LPT Port Support for VM.
2025-10-09 14:55:42 (947356): Disabling Audio Support for VM.
2025-10-09 14:55:42 (947356): Disabling Clipboard Support for VM.
2025-10-09 14:55:42 (947356): Disabling Drag and Drop Support for VM.
2025-10-09 14:55:42 (947356): Adding storage controller(s) to VM.
2025-10-09 14:55:42 (947356): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-09 14:55:43 (947356): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-09 14:55:44 (947356): forwarding host port 36315 to guest port 80
2025-10-09 14:55:44 (947356): Enabling remote desktop for VM.
2025-10-09 14:55:44 (947356): Enabling shared directory for VM.
2025-10-09 14:55:44 (947356): Starting VM using VBoxManage interface. (boinc_7c2efba1ca01a174, slot#2)
2025-10-09 14:55:46 (947356): Successfully started VM. (PID = '947841')
2025-10-09 14:55:46 (947356): Reporting VM Process ID to BOINC.
2025-10-09 14:55:46 (947356): Guest Log: BIOS: VirtualBox 7.0.20
2025-10-09 14:55:46 (947356): Guest Log: CPUID EDX: 0x178bfbff
2025-10-09 14:55:46 (947356): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-09 14:55:46 (947356): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-09 14:55:46 (947356): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-09 14:55:46 (947356): Detected: Web Application Enabled (http://localhost:36315)
2025-10-09 14:55:46 (947356): Detected: Remote Desktop Enabled (localhost:42295)
2025-10-09 14:55:46 (947356): Preference change detected
2025-10-09 14:55:46 (947356): Setting CPU throttle for VM. (100%)
2025-10-09 14:55:46 (947356): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 14:55:48 (947356): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-09 14:55:48 (947356): Guest Log: BIOS: Booting from Hard Disk...
2025-10-09 14:55:51 (947356): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-09 14:55:51 (947356): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-09 14:55:51 (947356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-09 14:55:54 (947356): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-09 14:55:54 (947356): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-09 14:56:01 (947356): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-09 14:56:01 (947356): Guest Log: 00:00:00.000105 main     Log opened 2025-10-09T12:56:01.178473000Z
2025-10-09 14:56:01 (947356): Guest Log: 00:00:00.000185 main     OS Product: Linux
2025-10-09 14:56:01 (947356): Guest Log: 00:00:00.000207 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-09 14:56:01 (947356): Guest Log: 00:00:00.000220 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-09 14:56:01 (947356): Guest Log: 00:00:00.000234 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-09 14:56:01 (947356): Guest Log: 00:00:00.000235 main     Process ID: 1238
2025-10-09 14:56:01 (947356): Guest Log: 00:00:00.000235 main     Package type: LINUX_64BITS_GENERIC
2025-10-09 14:56:01 (947356): Guest Log: 00:00:00.001588 main     5.2.32 r132073 started. Verbose level = 0
2025-10-09 14:56:02 (947356): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-09 14:56:02 (947356): Guest Log: [INFO] Mounting shared directory
2025-10-09 14:56:02 (947356): Guest Log: [INFO] Checking for init_data.xml
2025-10-09 14:56:04 (947356): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-09 14:56:04 (947356): Guest Log: [INFO] Detected branch: prod
2025-10-09 14:56:04 (947356): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-09 14:56:04 (947356): Guest Log: Copying input files
2025-10-09 14:56:05 (947356): Guest Log: Copied input files into RunAtlas.
2025-10-09 14:56:05 (947356): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-10-09 14:56:12 (947356): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-09 14:56:12 (947356): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-09 14:56:12 (947356): Guest Log: 2.6.3.0 1523 0 31532 151512 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-10-09 14:56:13 (947356): Guest Log: copied the webapp to /var/www
2025-10-09 14:56:13 (947356): Guest Log: core_number=1
2025-10-09 14:56:13 (947356): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-09 14:56:13 (947356): Guest Log:  *** Starting ATLAS job. (PandaID=6832199411 taskID=46376905) ***
2025-10-09 16:34:46 (947356): Status Report: Elapsed Time: '6000.000000'
2025-10-09 16:34:46 (947356): Status Report: CPU Time: '5900.360000'
2025-10-09 18:13:47 (947356): Status Report: Elapsed Time: '12000.000000'
2025-10-09 18:13:47 (947356): Status Report: CPU Time: '11844.380000'
2025-10-09 19:52:47 (947356): Status Report: Elapsed Time: '18000.000000'
2025-10-09 19:52:47 (947356): Status Report: CPU Time: '17788.490000'
2025-10-09 21:31:47 (947356): Status Report: Elapsed Time: '24000.000000'
2025-10-09 21:31:47 (947356): Status Report: CPU Time: '23732.640000'
2025-10-09 22:11:04 (947356): Guest Log:  *** Job finished ***
2025-10-09 22:11:04 (947356): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:10:28,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:10:28,817 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:10:57,714 | INFO     | [monitor] cgroup control has ended
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:10:58,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139854328645440)>', '<ExcThread(monitor, started 139854016911104)>']
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:10:59,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:10:59,822 | INFO     | [monitor] control thread has ended
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:11:03,988 | INFO     | all workflow threads have been joined
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:11:03,988 | INFO     | end of generic workflow (traces error code: 0)
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:11:03,988 | INFO     | traces error code: 0
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:11:03,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:11:04,061 [wrapper] ==== pilot stdout END ====
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:11:04,064 [wrapper] ==== wrapper stdout RESUME ====
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:11:04,067 [wrapper] pilotpid: 5847
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:11:04,070 [wrapper] Pilot exit status: 0
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:11:04,105 [wrapper] pandaids: 6832199411
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:11:04,125 [wrapper] cleanup supervisor_pilot  1000 5848
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:11:04,128 [wrapper] Test setup, not cleaning
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:11:04,131 [wrapper] apfmon messages muted
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:11:04,133 [wrapper] ==== wrapper stdout END ====
2025-10-09 22:11:04 (947356): Guest Log: 2025-10-09 20:11:04,136 [wrapper] ==== wrapper stderr END ====
2025-10-09 22:11:04 (947356): Guest Log:  *** Error codes and diagnostics ***
2025-10-09 22:11:04 (947356): Guest Log:     "exeErrorCode": 0,
2025-10-09 22:11:04 (947356): Guest Log:     "exeErrorDiag": "",
2025-10-09 22:11:04 (947356): Guest Log:     "pilotErrorCode": 0,
2025-10-09 22:11:04 (947356): Guest Log:     "pilotErrorDiag": "",
2025-10-09 22:11:04 (947356): Guest Log:  *** Listing of results directory ***
2025-10-09 22:11:05 (947356): Guest Log: total 183848
2025-10-09 22:11:05 (947356): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  6 00:25 pilot3.tar.gz
2025-10-09 22:11:05 (947356): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  6 00:47 runpilot2-wrapper.sh
2025-10-09 22:11:05 (947356): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  6 00:47 queuedata.json
2025-10-09 22:11:05 (947356): Guest Log: -rw-r--r--. 1 atlas atlas    565601 Oct  9 12:56 input.tar.gz
2025-10-09 22:11:05 (947356): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct  9 12:56 start_atlas.sh
2025-10-09 22:11:05 (947356): Guest Log: -rw-r--r--. 1 atlas atlas      9774 Oct  9 12:56 init_data.xml
2025-10-09 22:11:05 (947356): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  9 12:56 EVNT.46376901._003740.pool.root.1 -> /data/./ATLAS.root_0
2025-10-09 22:11:05 (947356): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Oct  9 12:56 pandaJob.out
2025-10-09 22:11:05 (947356): Guest Log: -rw-------. 1 atlas atlas    975454 Oct  9 12:56 agis_schedconf.cvmfs.json
2025-10-09 22:11:05 (947356): Guest Log: drwx------. 4 atlas atlas      4096 Oct  9 12:56 pilot3
2025-10-09 22:11:05 (947356): Guest Log: -rw-------. 1 atlas atlas 176213002 Oct  9 20:09 HITS.46376905._101199.pool.root.1
2025-10-09 22:11:05 (947356): Guest Log: -rw-------. 1 atlas atlas      1027 Oct  9 20:09 memory_monitor_summary.json
2025-10-09 22:11:05 (947356): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  9 20:09 agis_ddmendpoints.agis.ALL.json
2025-10-09 22:11:05 (947356): Guest Log: -rw-------. 1 atlas atlas    531974 Oct  9 20:09 log.46376905._101199.job.log.tgz.1
2025-10-09 22:11:05 (947356): Guest Log: -rw-------. 1 atlas atlas      7824 Oct  9 20:09 heartbeat.json
2025-10-09 22:11:05 (947356): Guest Log: -rw-------. 1 atlas atlas        95 Oct  9 20:10 pilot_heartbeat.json
2025-10-09 22:11:05 (947356): Guest Log: -rw-------. 1 atlas atlas      4877 Oct  9 20:11 pilotlog.txt
2025-10-09 22:11:05 (947356): Guest Log: -rw-------. 1 atlas atlas   3580956 Oct  9 20:11 log.46376905._101199.job.log.1
2025-10-09 22:11:05 (947356): Guest Log: -rw-------. 1 atlas atlas       357 Oct  9 20:11 output.list
2025-10-09 22:11:05 (947356): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  9 20:11 runtime_log
2025-10-09 22:11:05 (947356): Guest Log: -rw-------. 1 atlas atlas   4136960 Oct  9 20:11 result.tar.gz
2025-10-09 22:11:05 (947356): Guest Log: -rw-------. 1 atlas atlas       658 Oct  9 20:11 t09NDm8YoP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmR2HMDmaRIdwn.diag
2025-10-09 22:11:05 (947356): Guest Log: -rw-r--r--. 1 atlas atlas      8522 Oct  9 20:11 runtime_log.err
2025-10-09 22:11:05 (947356): Guest Log: Looking for outputfile HITS.46376905._101199.pool.root.1
2025-10-09 22:11:05 (947356): Guest Log: HITS file was successfully produced
2025-10-09 22:11:05 (947356): Guest Log: -rw-------. 1 atlas atlas 176213002 Oct  9 20:09 /home/atlas/RunAtlas/HITS.46376905._101199.pool.root.1
2025-10-09 22:11:05 (947356): Guest Log: Successfully finished the ATLAS job!
2025-10-09 22:11:05 (947356): Guest Log: Copying the results back to the shared directory!
2025-10-09 22:11:05 (947356): Guest Log:  *** Contents of shared directory: ***
2025-10-09 22:11:05 (947356): Guest Log: total 214636
2025-10-09 22:11:05 (947356): Guest Log: -rw-r--r--. 1 root root 215044811 Oct  9 12:55 ATLAS.root_0
2025-10-09 22:11:05 (947356): Guest Log: -rw-r--r--. 1 root root      9774 Oct  9 12:55 init_data.xml
2025-10-09 22:11:05 (947356): Guest Log: -rw-r--r--. 1 root root    565601 Oct  9 12:55 input.tar.gz
2025-10-09 22:11:05 (947356): Guest Log: -rw-r--r--. 1 root root   4136960 Oct  9 20:11 result.tar.gz
2025-10-09 22:11:05 (947356): Guest Log: -rw-r--r--. 1 root root     15120 Oct  9 12:55 start_atlas.sh
2025-10-09 22:11:05 (947356): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-09 22:11:05 (947356): VM Completion File Detected.
2025-10-09 22:11:05 (947356): Powering off VM.
2025-10-09 22:11:05 (947356): Successfully stopped VM.
2025-10-09 22:11:05 (947356): Deregistering VM. (boinc_7c2efba1ca01a174, slot#2)
2025-10-09 22:11:05 (947356): Removing network bandwidth throttle group from VM.
2025-10-09 22:11:05 (947356): Removing VM from VirtualBox.
2025-10-09 22:11:11 (947356): called boinc_finish(0)

</stderr_txt>
]]>

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