Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:54:13 (2402387): wrapper (7.7.26015): starting
08:54:13 (2402387): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 08:54:13] Arguments: --nthreads 8
[2025-10-09 08:54:13] Threads: 8
[2025-10-09 08:54:13] Checking for CVMFS
[2025-10-09 08:54:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 08:54:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 08:54:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 08:54:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 08:54:15] 2.13.2.0 3683012 8493 130224 151512 1 780 21289718 40960001 37780 16776704 0 90214544 99.798 50914248 32822 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 08:54:15] CVMFS is ok
[2025-10-09 08:54:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 08:54:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 08:54:15] Further information can be found at the LHC@home message board.
[2025-10-09 08:54:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 08:54:15] Checking for apptainer binary...
[2025-10-09 08:54:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 08:54:15] Running /usr/bin/apptainer --version
[2025-10-09 08:54:15] apptainer version 1.4.3-1.el9
[2025-10-09 08:54:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 08:54:15] c8-7-4.aglt2.org
[2025-10-09 08:54:15] apptainer works
[2025-10-09 08:54:15] Set ATHENA_PROC_NUMBER=8
[2025-10-09 08:54:15] Set ATHENA_CORE_NUMBER=8
[2025-10-09 08:54:15] Starting ATLAS job with PandaID=6837327818
[2025-10-09 08:54:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 10:37:52]  *** The last 200 lines of the pilot log: ***
[2025-10-09 10:37:52] 2025-10-09 14:36:35,368 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 10:37:52] 2025-10-09 14:36:36,516 | INFO     | time since job start (6062s) is within the limit (172800.0s)
[2025-10-09 10:37:52] 2025-10-09 14:36:37,873 | INFO     | monitor loop #390: job 0:6837327818 is in state 'finished'
[2025-10-09 10:37:52] 2025-10-09 14:36:37,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 10:37:52] 2025-10-09 14:36:38,539 | INFO     | time since job start (6064s) is within the limit (172800.0s)
[2025-10-09 10:37:52] 2025-10-09 14:36:40,403 | INFO     | monitor loop #391: job 0:6837327818 is in state 'finished'
[2025-10-09 10:37:52] 2025-10-09 14:36:40,406 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 10:37:52] 2025-10-09 14:36:40,555 | INFO     | time since job start (6066s) is within the limit (172800.0s)
[2025-10-09 10:37:52] 2025-10-09 14:36:42,565 | INFO     | time since job start (6068s) is within the limit (172800.0s)
[2025-10-09 10:37:52] 2025-10-09 14:36:42,911 | INFO     | monitor loop #392: job 0:6837327818 is in state 'finished'
[2025-10-09 10:37:52] 2025-10-09 14:36:42,911 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 10:37:52] 2025-10-09 14:36:44,574 | INFO     | time since job start (6070s) is within the limit (172800.0s)
[2025-10-09 10:37:52] 2025-10-09 14:36:45,431 | INFO     | monitor loop #393: job 0:6837327818 is in state 'finished'
[2025-10-09 10:37:52] 2025-10-09 14:36:45,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 10:37:52] 2025-10-09 14:36:47,161 | INFO     | PID=2417250 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 10:37:52] 2025-10-09 14:36:47,161 | INFO     | .. there are 41 such processes running
[2025-10-09 10:37:52] 2025-10-09 14:36:47,939 | INFO     | monitor loop #394: job 0:6837327818 is in state 'finished'
[2025-10-09 10:37:52] 2025-10-09 14:36:47,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 10:37:52] 2025-10-09 14:36:48,162 | INFO     | time since job start (6074s) is within the limit (172800.0s)
[2025-10-09 10:37:52] 2025-10-09 14:36:50,169 | INFO     | time since job start (6076s) is within the limit (172800.0s)
[2025-10-09 10:37:52] 2025-10-09 14:36:50,457 | INFO     | monitor loop #395: job 0:6837327818 is in state 'finished'
[2025-10-09 10:37:52] 2025-10-09 14:36:50,457 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 10:37:52] 2025-10-09 14:36:52,188 | INFO     | time since job start (6078s) is within the limit (172800.0s)
[2025-10-09 10:37:52] 2025-10-09 14:36:52,965 | INFO     | monitor loop #396: job 0:6837327818 is in state 'finished'
[2025-10-09 10:37:52] 2025-10-09 14:36:52,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 10:37:52] 2025-10-09 14:36:54,197 | INFO     | time since job start (6080s) is within the limit (172800.0s)
[2025-10-09 10:37:52] 2025-10-09 14:36:55,470 | INFO     | monitor loop #397: job 0:6837327818 is in state 'finished'
[2025-10-09 10:37:52] 2025-10-09 14:36:55,470 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 10:37:52] 2025-10-09 14:36:56,208 | INFO     | time since job start (6082s) is within the limit (172800.0s)
[2025-10-09 10:37:52] 2025-10-09 14:36:57,985 | INFO     | monitor loop #398: job 0:6837327818 is in state 'finished'
[2025-10-09 10:37:52] 2025-10-09 14:36:57,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 10:37:52] 2025-10-09 14:36:58,234 | INFO     | time since job start (6084s) is within the limit (172800.0s)
[2025-10-09 10:37:52] 2025-10-09 14:37:00,241 | INFO     | time since job start (6086s) is within the limit (172800.0s)
[2025-10-09 10:37:52] 2025-10-09 14:37:00,490 | INFO     | monitor loop #399: job 0:6837327818 is in state 'finished'
[2025-10-09 10:37:52] 2025-10-09 14:37:00,497 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 10:37:52] 2025-10-09 14:37:00,890 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-09 10:37:52] 2025-10-09 14:37:00,900 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3798.480046874998
[2025-10-09 10:37:52] 2025-10-09 14:37:00,925 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6837327818/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 10:37:52] 2025-10-09 14:37:00,926 | INFO     | extracted standard info from prmon json
[2025-10-09 10:37:52] 2025-10-09 14:37:00,926 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 10:37:52] 2025-10-09 14:37:00,926 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 10:37:52] 2025-10-09 14:37:00,926 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 10:37:52] 2025-10-09 14:37:00,926 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 10:37:52] 2025-10-09 14:37:00,931 | INFO     | fitting pss+swap vs Time
[2025-10-09 10:37:52] 2025-10-09 14:37:00,931 | INFO     | sum of square deviations: 218577520.89887595
[2025-10-09 10:37:52] 2025-10-09 14:37:00,932 | INFO     | sum of deviations: 9810039069.629211
[2025-10-09 10:37:52] 2025-10-09 14:37:00,932 | INFO     | mean x: 1760017706.0337079
[2025-10-09 10:37:52] 2025-10-09 14:37:00,932 | INFO     | mean y: 2323852.1235955055
[2025-10-09 10:37:52] 2025-10-09 14:37:00,932 | INFO     | -- intersect: -78989524844.97014
[2025-10-09 10:37:52] 2025-10-09 14:37:00,932 | INFO     | intersect: -78989524844.97014
[2025-10-09 10:37:52] 2025-10-09 14:37:00,932 | INFO     | chi2: 0.4570392529243568
[2025-10-09 10:37:52] 2025-10-09 14:37:00,932 | INFO     | -- intersect: -78989524844.97014
[2025-10-09 10:37:52] 2025-10-09 14:37:00,932 | INFO     | current memory leak: 44.88 B/s (using 89 data points, chi2=0.46)
[2025-10-09 10:37:52] 2025-10-09 14:37:00,932 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2025-10-09 10:37:52] 2025-10-09 14:37:00,932 | INFO     | ..............................
[2025-10-09 10:37:52] 2025-10-09 14:37:00,932 | INFO     | . Timing measurements:
[2025-10-09 10:37:52] 2025-10-09 14:37:00,932 | INFO     | . get job = 0 s
[2025-10-09 10:37:52] 2025-10-09 14:37:00,932 | INFO     | . initial setup = 7 s
[2025-10-09 10:37:52] 2025-10-09 14:37:00,932 | INFO     | . payload setup = 47 s
[2025-10-09 10:37:52] 2025-10-09 14:37:00,933 | INFO     | . stage-in = 0 s
[2025-10-09 10:37:52] 2025-10-09 14:37:00,933 | INFO     | . payload execution = 5900 s
[2025-10-09 10:37:52] 2025-10-09 14:37:00,933 | INFO     | . stage-out = 4 s
[2025-10-09 10:37:52] 2025-10-09 14:37:00,933 | INFO     | . log creation = 0 s
[2025-10-09 10:37:52] 2025-10-09 14:37:00,933 | INFO     | ..............................
[2025-10-09 10:37:52] 2025-10-09 14:37:01,058 | INFO     | 
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | job summary report
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | --------------------------------------------------
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | PanDA job id: 6837327818
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | task id: 46676269
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | errors: (none)
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | pilot state: finished 
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | transexitcode: 0
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | exeerrorcode: 0
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | exeerrordiag: 
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | exitcode: 0
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | exitmsg: OK
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | cpuconsumptiontime: 21758 s
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | nevents: 400
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | neventsw: 0
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | pid: 2468237
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | pgrp: 2468237
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | corecount: 8
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | event service: False
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | sizes: {0: 2348627, 1: 2348711, 2: 2348882, 13: 2348910, 23: 2348966, 34: 2348994, 43: 2349412, 45: 2349440, 5952: 2376084, 5953: 2376083, 5957: 2385137, 5959: 238
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | --------------------------------------------------
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | 
[2025-10-09 10:37:52] 2025-10-09 14:37:01,059 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-09 10:37:52] 2025-10-09 14:37:01,273 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,274 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 10:37:52] 2025-10-09 14:37:01,275 | INFO     | job 6837327818 has completed (purged errors)
[2025-10-09 10:37:52] 2025-10-09 14:37:01,275 | INFO     | overall cleanup function is called
[2025-10-09 10:37:52] 2025-10-09 14:37:02,282 | INFO     | --- collectZombieJob: --- 10, [2468237]
[2025-10-09 10:37:52] 2025-10-09 14:37:02,282 | INFO     | zombie collector waiting for pid 2468237
[2025-10-09 10:37:52] 2025-10-09 14:37:02,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 10:37:52] 2025-10-09 14:37:02,283 | INFO     | collected zombie processes
[2025-10-09 10:37:52] 2025-10-09 14:37:02,283 | INFO     | will attempt to kill all subprocesses of pid=2468237
[2025-10-09 10:37:52] 2025-10-09 14:37:04,630 | INFO     | process IDs to be killed: [2468237] (in reverse order)
[2025-10-09 10:37:52] 2025-10-09 14:37:05,237 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 10:37:52] 2025-10-09 14:37:05,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 10:37:52] 2025-10-09 14:37:05,288 | INFO     | did not find any defunct processes belonging to 2468237
[2025-10-09 10:37:52] 2025-10-09 14:37:05,361 | INFO     | did not find any defunct processes belonging to 2468237
[2025-10-09 10:37:52] 2025-10-09 14:37:05,361 | INFO     | ready for new job
[2025-10-09 10:37:52] 2025-10-09 14:37:05,361 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 10:37:52] 2025-10-09 14:37:05,364 | INFO     | ***************************************
[2025-10-09 10:37:52] 2025-10-09 14:37:05,366 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 10:37:52] 2025-10-09 14:37:05,366 | INFO     | ***************************************
[2025-10-09 10:37:52] 2025-10-09 14:37:05,367 | INFO     | 
[2025-10-09 10:37:52] 2025-10-09 14:37:05,403 | INFO     | architecture information:
[2025-10-09 10:37:52] 2025-10-09 14:37:05,407 | INFO     | executing command: cat /etc/os-release
[2025-10-09 10:37:52] 2025-10-09 14:37:05,478 | INFO     | cat /etc/os-release:
[2025-10-09 10:37:52] NAME="CentOS Linux"
[2025-10-09 10:37:52] VERSION="7 (Core)"
[2025-10-09 10:37:52] ID="centos"
[2025-10-09 10:37:52] ID_LIKE="rhel fedora"
[2025-10-09 10:37:52] VERSION_ID="7"
[2025-10-09 10:37:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 10:37:52] ANSI_COLOR="0;31"
[2025-10-09 10:37:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 10:37:52] HOME_URL="https://www.centos.org/"
[2025-10-09 10:37:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 10:37:52] 
[2025-10-09 10:37:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 10:37:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 10:37:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 10:37:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 10:37:52] 
[2025-10-09 10:37:52] 2025-10-09 14:37:05,479 | INFO     | ***************************************
[2025-10-09 10:37:52] 2025-10-09 14:37:05,982 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-09 10:37:52] 2025-10-09 14:37:06,046 | INFO     | sufficient remaining disk space (170413522944 B)
[2025-10-09 10:37:52] 2025-10-09 14:37:06,046 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 10:37:52] 2025-10-09 14:37:06,046 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 10:37:52] 2025-10-09 14:37:06,046 | INFO     | update_server=False
[2025-10-09 10:37:52] 2025-10-09 14:37:06,046 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 10:37:52] 2025-10-09 14:37:06,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 10:37:52] 2025-10-09 14:37:06,250 | INFO     | all data control threads have been joined
[2025-10-09 10:37:52] 2025-10-09 14:37:06,254 | INFO     | all job control threads have been joined
[2025-10-09 10:37:52] 2025-10-09 14:37:06,286 | INFO     | all payload control threads have been joined
[2025-10-09 10:37:52] 2025-10-09 14:37:06,549 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 10:37:52] 2025-10-09 14:37:06,549 | INFO     | aborting loop
[2025-10-09 10:37:52] 2025-10-09 14:37:06,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 10:37:52] 2025-10-09 14:37:07,051 | INFO     | [job] retrieve thread has finished
[2025-10-09 10:37:52] 2025-10-09 14:37:07,118 | INFO     | [job] queue monitor thread has finished
[2025-10-09 10:37:52] 2025-10-09 14:37:07,256 | INFO     | [data] control thread has finished
[2025-10-09 10:37:52] 2025-10-09 14:37:07,260 | INFO     | [job] control thread has finished
[2025-10-09 10:37:52] 2025-10-09 14:37:07,292 | INFO     | [payload] control thread has finished
[2025-10-09 10:37:52] 2025-10-09 14:37:07,555 | INFO     | [job] job monitor thread has finished
[2025-10-09 10:37:52] 2025-10-09 14:37:07,568 | INFO     | [payload] failed_post thread has finished
[2025-10-09 10:37:52] 2025-10-09 14:37:07,592 | INFO     | [data] copytool_in thread has finished
[2025-10-09 10:37:52] 2025-10-09 14:37:07,593 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 10:37:52] 2025-10-09 14:37:07,641 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 10:37:52] 2025-10-09 14:37:08,058 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 10:37:52] 2025-10-09 14:37:08,064 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 10:37:52] 2025-10-09 14:37:08,147 | INFO     | [job] validate thread has finished
[2025-10-09 10:37:52] 2025-10-09 14:37:08,342 | INFO     | [payload] validate_post thread has finished
[2025-10-09 10:37:52] 2025-10-09 14:37:08,898 | INFO     | [data] copytool_out thread has finished
[2025-10-09 10:37:52] 2025-10-09 14:37:09,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 10:37:52] 2025-10-09 14:37:13,154 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 10:37:52] 2025-10-09 14:37:32,308 | INFO     | 6094s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-09 10:37:52] 2025-10-09 14:37:36,268 | INFO     | PID=2417250 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 10:37:52] 2025-10-09 14:37:36,268 | INFO     | .. there are 41 such processes running
[2025-10-09 10:37:52] 2025-10-09 14:37:36,269 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 10:37:52] 2025-10-09 14:37:36,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 10:37:52] 2025-10-09 14:37:36,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 10:37:52] 2025-10-09 14:37:44,316 | INFO     | [monitor] cgroup control has ended
[2025-10-09 10:37:52] 2025-10-09 14:37:45,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139655986771776)>', '<ExcThread(monitor, started 139655357921024)>']
[2025-10-09 10:37:52] 2025-10-09 14:37:45,337 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 10:37:52] 2025-10-09 14:37:45,338 | INFO     | [monitor] control thread has ended
[2025-10-09 10:37:52] 2025-10-09 14:37:50,090 | INFO     | all workflow threads have been joined
[2025-10-09 10:37:52] 2025-10-09 14:37:50,090 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 10:37:52] 2025-10-09 14:37:50,091 | INFO     | traces error code: 0
[2025-10-09 10:37:52] 2025-10-09 14:37:50,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 10:37:52] 2025-10-09 14:37:50,892 [wrapper] ==== pilot stdout END ====
[2025-10-09 10:37:52] 2025-10-09 14:37:50,936 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 10:37:52] 2025-10-09 14:37:50,954 [wrapper] pilotpid: 2417250
[2025-10-09 10:37:52] 2025-10-09 14:37:50,974 [wrapper] Pilot exit status: 0
[2025-10-09 10:37:52] 2025-10-09 14:37:51,091 [wrapper] pandaids: 6837327818
[2025-10-09 10:37:52] 2025-10-09 14:37:51,259 [wrapper] cleanup supervisor_pilot 3264336 2417251
[2025-10-09 10:37:52] 2025-10-09 14:37:51,263 [wrapper] Test setup, not cleaning
[2025-10-09 10:37:52] 2025-10-09 14:37:51,277 [wrapper] apfmon messages muted
[2025-10-09 10:37:52] 2025-10-09 14:37:51,286 [wrapper] ==== wrapper stdout END ====
[2025-10-09 10:37:52] 2025-10-09 14:37:51,304 [wrapper] ==== wrapper stderr END ====
[2025-10-09 10:37:52]  *** Error codes and diagnostics ***
[2025-10-09 10:37:52]     "exeErrorCode": 0,
[2025-10-09 10:37:52]     "exeErrorDiag": "",
[2025-10-09 10:37:52]     "pilotErrorCode": 0,
[2025-10-09 10:37:52]     "pilotErrorDiag": "",
[2025-10-09 10:37:52]  *** Listing of results directory ***
[2025-10-09 10:37:52] total 409588
[2025-10-09 10:37:52] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 06:27 pilot3.tar.gz
[2025-10-09 10:37:52] -rwx------. 1 boincer umatlas     36292 Oct  9 06:43 runpilot2-wrapper.sh
[2025-10-09 10:37:52] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 06:45 queuedata.json
[2025-10-09 10:37:52] -rw-r--r--. 1 boincer umatlas       100 Oct  9 08:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 10:37:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 08:54 run_atlas
[2025-10-09 10:37:52] -rw-r--r--. 1 boincer umatlas       105 Oct  9 08:54 job.xml
[2025-10-09 10:37:52] -rw-r--r--. 2 boincer umatlas 220673622 Oct  9 08:54 EVNT.46676267._000540.pool.root.1
[2025-10-09 10:37:52] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 08:54 start_atlas.sh
[2025-10-09 10:37:52] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 08:54 shared
[2025-10-09 10:37:52] -rw-r--r--. 2 boincer umatlas    569679 Oct  9 08:54 input.tar.gz
[2025-10-09 10:37:52] -rw-r--r--. 1 boincer umatlas         0 Oct  9 08:54 boinc_lockfile
[2025-10-09 10:37:52] -rw-r--r--. 1 boincer umatlas      2549 Oct  9 08:54 pandaJob.out
[2025-10-09 10:37:52] -rw-------. 1 boincer umatlas    975454 Oct  9 08:55 agis_schedconf.cvmfs.json
[2025-10-09 10:37:52] -rw-------. 1 boincer umatlas   1560401 Oct  9 08:55 agis_ddmendpoints.agis.ALL.json
[2025-10-09 10:37:52] drwx------. 5 boincer umatlas      4096 Oct  9 08:55 pilot3
[2025-10-09 10:37:52] -rw-r--r--. 1 boincer umatlas      7161 Oct  9 10:27 init_data.xml
[2025-10-09 10:37:52] -rw-------. 1 boincer umatlas 192634585 Oct  9 10:35 HITS.46676269._013252.pool.root.1
[2025-10-09 10:37:52] -rw-r--r--. 1 boincer umatlas       529 Oct  9 10:35 boinc_task_state.xml
[2025-10-09 10:37:52] -rw-------. 1 boincer umatlas      1034 Oct  9 10:36 memory_monitor_summary.json
[2025-10-09 10:37:52] -rw-------. 1 boincer umatlas    326385 Oct  9 10:36 log.46676269._013252.job.log.tgz.1
[2025-10-09 10:37:52] -rw-------. 1 boincer umatlas      7774 Oct  9 10:37 heartbeat.json
[2025-10-09 10:37:52] -rw-------. 1 boincer umatlas        95 Oct  9 10:37 pilot_heartbeat.json
[2025-10-09 10:37:52] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 10:37 boinc_mmap_file
[2025-10-09 10:37:52] -rw-r--r--. 1 boincer umatlas        27 Oct  9 10:37 wrapper_checkpoint.txt
[2025-10-09 10:37:52] -rw-------. 1 boincer umatlas      4940 Oct  9 10:37 pilotlog.txt
[2025-10-09 10:37:52] -rw-------. 1 boincer umatlas    781702 Oct  9 10:37 log.46676269._013252.job.log.1
[2025-10-09 10:37:52] -rw-------. 1 boincer umatlas       357 Oct  9 10:37 output.list
[2025-10-09 10:37:52] -rw-r--r--. 1 boincer umatlas       620 Oct  9 10:37 runtime_log
[2025-10-09 10:37:52] -rw-------. 1 boincer umatlas   1126400 Oct  9 10:37 result.tar.gz
[2025-10-09 10:37:52] -rw-r--r--. 1 boincer umatlas      8693 Oct  9 10:37 runtime_log.err
[2025-10-09 10:37:52] -rw-------. 1 boincer umatlas       652 Oct  9 10:37 PUOODmhI3Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmZTNMDmBcmztn.diag
[2025-10-09 10:37:52] -rw-r--r--. 1 boincer umatlas     22400 Oct  9 10:37 stderr.txt
[2025-10-09 10:37:52] HITS file was successfully produced:
[2025-10-09 10:37:52] -rw-------. 1 boincer umatlas 192634585 Oct  9 10:35 shared/HITS.pool.root.1
[2025-10-09 10:37:52]  *** Contents of shared directory: ***
[2025-10-09 10:37:52] total 405304
[2025-10-09 10:37:52] -rw-r--r--. 2 boincer umatlas 220673622 Oct  9 08:54 ATLAS.root_0
[2025-10-09 10:37:52] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 08:54 start_atlas.sh
[2025-10-09 10:37:52] -rw-r--r--. 2 boincer umatlas    569679 Oct  9 08:54 input.tar.gz
[2025-10-09 10:37:52] -rw-------. 1 boincer umatlas 192634585 Oct  9 10:35 HITS.pool.root.1
[2025-10-09 10:37:52] -rw-------. 1 boincer umatlas   1126400 Oct  9 10:37 result.tar.gz
10:37:53 (2402387): run_atlas exited; CPU time 21927.489544
10:37:53 (2402387): called boinc_finish(0)

</stderr_txt>
]]>

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