Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:18:56 (3037578): wrapper (7.7.26015): starting
05:18:56 (3037578): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 05:18:56] Arguments: --nthreads 8
[2025-10-09 05:18:56] Threads: 8
[2025-10-09 05:18:56] Checking for CVMFS
[2025-10-09 05:18:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 05:18:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 05:18:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 05:18:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 05:18:56] 2.11.3.0 1861 25590 242284 151512 0 361 37026546 45568000 9368 130560 0 151998111 99.815 81568758 20118 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-09 05:18:56] CVMFS is ok
[2025-10-09 05:18:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 05:18:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 05:18:56] Further information can be found at the LHC@home message board.
[2025-10-09 05:18:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 05:18:56] Checking for apptainer binary...
[2025-10-09 05:18:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 05:18:56] Running /usr/bin/apptainer --version
[2025-10-09 05:18:56] apptainer version 1.4.1-1.el9
[2025-10-09 05:18:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 05:18:57] wns0021.triumf.lcg
[2025-10-09 05:18:57] apptainer works
[2025-10-09 05:18:57] Set ATHENA_PROC_NUMBER=8
[2025-10-09 05:18:57] Set ATHENA_CORE_NUMBER=8
[2025-10-09 05:18:57] Starting ATLAS job with PandaID=6837331620
[2025-10-09 05:18:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 05:22:16]  *** The last 200 lines of the pilot log: ***
[2025-10-09 05:22:16] 2025-10-09 12:21:44,051 | WARNING  | found no stored workdir sizes
[2025-10-09 05:22:16] 2025-10-09 12:21:44,051 | INFO     | will not add max space = 0 B to job metrics
[2025-10-09 05:22:16] 2025-10-09 12:21:44,052 | WARNING  | wrong length of table data, x=[1760012370.0], y=[1112.0] (must be same and length>=4)
[2025-10-09 05:22:16] 2025-10-09 12:21:44,052 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-09 05:22:16] 2025-10-09 12:21:44,052 | INFO     | ..............................
[2025-10-09 05:22:16] 2025-10-09 12:21:44,052 | INFO     | . Timing measurements:
[2025-10-09 05:22:16] 2025-10-09 12:21:44,052 | INFO     | . get job = 0 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . initial setup = 2 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . payload setup = 4 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . stage-in = 0 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . payload execution = 16 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . stage-out = 0 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . log creation = 0 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | ..............................
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837331620/pilotlog.txt
[2025-10-09 05:22:16] 2025-10-09 12:21:44,062 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-09 05:22:16] - Log from pilotlog.txt -
[2025-10-09 05:22:16] 2025-10-09 12:21:44,051 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 05:22:16] 2025-10-09 12:21:44,051 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 05:22:16] 2025-10-09 12:21:44,051 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 05:22:16] 2025-10-09 12:21:44,051 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 05:22:16] 2025-10-09 12:21:44,051 | WARNING  | found no stored workdir sizes
[2025-10-09 05:22:16] 2025-10-09 12:21:44,051 | INFO     | will not add max space = 0 B to job metrics
[2025-10-09 05:22:16] 2025-10-09 12:21:44,052 | WARNING  | wrong length of table data, x=[1760012370.0], y=[1112.0] (must be same and length>=4)
[2025-10-09 05:22:16] 2025-10-09 12:21:44,052 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-09 05:22:16] 2025-10-09 12:21:44,052 | INFO     | ..............................
[2025-10-09 05:22:16] 2025-10-09 12:21:44,052 | INFO     | . Timing measurements:
[2025-10-09 05:22:16] 2025-10-09 12:21:44,052 | INFO     | . get job = 0 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . initial setup = 2 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . payload setup = 4 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . stage-in = 0 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . payload execution = 16 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . stage-out = 0 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . log creation = 0 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | ..............................
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837331620/pilotlog.txt
[2025-10-09 05:22:16] 2025-10-09 12:21:44,062 | WARNING  | 
[2025-10-09 05:22:16] [begin log extracts]
[2025-10-09 05:22:16] - Log from pilotlog.txt -
[2025-10-09 05:22:16] 2025-10-09 12:21:44,051 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 05:22:16] 2025-10-09 12:21:44,051 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 05:22:16] 2025-10-09 12:21:44,051 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 05:22:16] 2025-10-09 12:21:44,051 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 05:22:16] 2025-10-09 12:21:44,051 | WARNING  | found no stored workdir sizes
[2025-10-09 05:22:16] 2025-10-09 12:21:44,051 | INFO     | will not add max space = 0 B to job metrics
[2025-10-09 05:22:16] 2025-10-09 12:21:44,052 | WARNING  | wrong length of table data, x=[1760012370.0], y=[1112.0] (must be same and length>=4)
[2025-10-09 05:22:16] 2025-10-09 12:21:44,052 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-09 05:22:16] 2025-10-09 12:21:44,052 | INFO     | ..............................
[2025-10-09 05:22:16] 2025-10-09 12:21:44,052 | INFO     | . Timing measurements:
[2025-10-09 05:22:16] 2025-10-09 12:21:44,052 | INFO     | . get job = 0 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . initial setup = 2 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . payload setup = 4 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . stage-in = 0 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . payload execution = 16 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . stage-out = 0 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | . log creation = 0 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | ..............................
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 05:22:16] 2025-10-09 12:21:44,053 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837331620/pilotlog.txt
[2025-10-09 05:22:16] [end log extracts]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,062 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-09 05:22:16] 2025-10-09 12:21:44,063 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-09 05:22:16] 2025-10-09 12:21:44,154 | INFO     | 
[2025-10-09 05:22:16] 2025-10-09 12:21:44,154 | INFO     | job summary report
[2025-10-09 05:22:16] 2025-10-09 12:21:44,154 | INFO     | --------------------------------------------------
[2025-10-09 05:22:16] 2025-10-09 12:21:44,154 | INFO     | PanDA job id: 6837331620
[2025-10-09 05:22:16] 2025-10-09 12:21:44,154 | INFO     | task id: 46676269
[2025-10-09 05:22:16] 2025-10-09 12:21:44,154 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-09 05:19:38,058 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-09 05:22:16] 2025-10-09 12:21:44,154 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 05:22:16] 2025-10-09 12:21:44,155 | INFO     | pilot state: failed 
[2025-10-09 05:22:16] 2025-10-09 12:21:44,155 | INFO     | transexitcode: 65
[2025-10-09 05:22:16] 2025-10-09 12:21:44,155 | INFO     | exeerrorcode: 65
[2025-10-09 05:22:16] 2025-10-09 12:21:44,155 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 05:22:16] 2025-10-09 12:21:44,155 | INFO     | exitcode: 65
[2025-10-09 05:22:16] 2025-10-09 12:21:44,155 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 05:22:16] 2025-10-09 12:21:44,155 | INFO     | cpuconsumptiontime: 18 s
[2025-10-09 05:22:16] 2025-10-09 12:21:44,155 | INFO     | nevents: 0
[2025-10-09 05:22:16] 2025-10-09 12:21:44,155 | INFO     | neventsw: 0
[2025-10-09 05:22:16] 2025-10-09 12:21:44,155 | INFO     | pid: 3047744
[2025-10-09 05:22:16] 2025-10-09 12:21:44,155 | INFO     | pgrp: 3047744
[2025-10-09 05:22:16] 2025-10-09 12:21:44,155 | INFO     | corecount: 8
[2025-10-09 05:22:16] 2025-10-09 12:21:44,155 | INFO     | event service: False
[2025-10-09 05:22:16] 2025-10-09 12:21:44,155 | INFO     | sizes: {0: 2348739, 1: 2348881, 4: 2349143, 11: 2349171, 24: 2376628, 143: 2376766}
[2025-10-09 05:22:16] 2025-10-09 12:21:44,156 | INFO     | --------------------------------------------------
[2025-10-09 05:22:16] 2025-10-09 12:21:44,156 | INFO     | 
[2025-10-09 05:22:16] 2025-10-09 12:21:44,156 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-09 05:22:16] 2025-10-09 12:21:44,169 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,169 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,169 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,169 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,169 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,169 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,169 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,169 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,169 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,169 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,170 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,170 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,170 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,170 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,170 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,170 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 05:22:16] 2025-10-09 12:21:44,170 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,170 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 05:22:16] 2025-10-09 12:21:44,170 | INFO     | job 6837331620 has completed (purged errors)
[2025-10-09 05:22:16] 2025-10-09 12:21:44,170 | INFO     | overall cleanup function is called
[2025-10-09 05:22:16] 2025-10-09 12:21:45,172 | INFO     | --- collectZombieJob: --- 10, [3047744]
[2025-10-09 05:22:16] 2025-10-09 12:21:45,173 | INFO     | zombie collector waiting for pid 3047744
[2025-10-09 05:22:16] 2025-10-09 12:21:45,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 05:22:16] 2025-10-09 12:21:45,173 | INFO     | collected zombie processes
[2025-10-09 05:22:16] 2025-10-09 12:21:45,173 | INFO     | will attempt to kill all subprocesses of pid=3047744
[2025-10-09 05:22:16] 2025-10-09 12:21:45,344 | INFO     | process IDs to be killed: [3047744] (in reverse order)
[2025-10-09 05:22:16] 2025-10-09 12:21:45,399 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 05:22:16] 2025-10-09 12:21:45,400 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 05:22:16] 2025-10-09 12:21:45,406 | INFO     | did not find any defunct processes belonging to 3047744
[2025-10-09 05:22:16] 2025-10-09 12:21:45,411 | INFO     | did not find any defunct processes belonging to 3047744
[2025-10-09 05:22:16] 2025-10-09 12:21:45,412 | INFO     | ready for new job
[2025-10-09 05:22:16] 2025-10-09 12:21:45,412 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 05:22:16] 2025-10-09 12:21:45,413 | INFO     | ***************************************
[2025-10-09 05:22:16] 2025-10-09 12:21:45,414 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 05:22:16] 2025-10-09 12:21:45,414 | INFO     | ***************************************
[2025-10-09 05:22:16] 2025-10-09 12:21:45,414 | INFO     | 
[2025-10-09 05:22:16] 2025-10-09 12:21:45,415 | INFO     | architecture information:
[2025-10-09 05:22:16] 2025-10-09 12:21:45,415 | INFO     | executing command: cat /etc/os-release
[2025-10-09 05:22:16] 2025-10-09 12:21:45,425 | INFO     | cat /etc/os-release:
[2025-10-09 05:22:16] NAME="CentOS Linux"
[2025-10-09 05:22:16] VERSION="7 (Core)"
[2025-10-09 05:22:16] ID="centos"
[2025-10-09 05:22:16] ID_LIKE="rhel fedora"
[2025-10-09 05:22:16] VERSION_ID="7"
[2025-10-09 05:22:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 05:22:16] ANSI_COLOR="0;31"
[2025-10-09 05:22:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 05:22:16] HOME_URL="https://www.centos.org/"
[2025-10-09 05:22:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 05:22:16] 
[2025-10-09 05:22:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 05:22:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 05:22:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 05:22:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 05:22:16] 
[2025-10-09 05:22:16] 2025-10-09 12:21:45,426 | INFO     | ***************************************
[2025-10-09 05:22:16] 2025-10-09 12:21:45,929 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-09 05:22:16] 2025-10-09 12:21:45,941 | INFO     | sufficient remaining disk space (1240563974144 B)
[2025-10-09 05:22:16] 2025-10-09 12:21:45,941 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 05:22:16] 2025-10-09 12:21:45,941 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 05:22:16] 2025-10-09 12:21:45,942 | INFO     | update_server=False
[2025-10-09 05:22:16] 2025-10-09 12:21:45,942 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 05:22:16] 2025-10-09 12:21:45,942 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 05:22:16] 2025-10-09 12:21:45,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 05:22:16] 2025-10-09 12:21:46,041 | INFO     | all data control threads have been joined
[2025-10-09 05:22:16] 2025-10-09 12:21:46,376 | INFO     | all job control threads have been joined
[2025-10-09 05:22:16] 2025-10-09 12:21:46,783 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 05:22:16] 2025-10-09 12:21:46,784 | INFO     | aborting loop
[2025-10-09 05:22:16] 2025-10-09 12:21:46,947 | INFO     | [job] retrieve thread has finished
[2025-10-09 05:22:16] 2025-10-09 12:21:46,948 | INFO     | [job] queue monitor thread has finished
[2025-10-09 05:22:16] 2025-10-09 12:21:47,017 | INFO     | [payload] validate_post thread has finished
[2025-10-09 05:22:16] 2025-10-09 12:21:47,024 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 05:22:16] 2025-10-09 12:21:47,046 | INFO     | [data] control thread has finished
[2025-10-09 05:22:16] 2025-10-09 12:21:47,066 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 05:22:16] 2025-10-09 12:21:47,071 | INFO     | all payload control threads have been joined
[2025-10-09 05:22:16] 2025-10-09 12:21:47,381 | INFO     | [job] control thread has finished
[2025-10-09 05:22:16] 2025-10-09 12:21:47,515 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 05:22:16] 2025-10-09 12:21:47,538 | INFO     | [data] copytool_in thread has finished
[2025-10-09 05:22:16] 2025-10-09 12:21:47,671 | INFO     | [payload] failed_post thread has finished
[2025-10-09 05:22:16] 2025-10-09 12:21:47,789 | INFO     | [job] job monitor thread has finished
[2025-10-09 05:22:16] 2025-10-09 12:21:47,947 | INFO     | [data] copytool_out thread has finished
[2025-10-09 05:22:16] 2025-10-09 12:21:48,076 | INFO     | [payload] control thread has finished
[2025-10-09 05:22:16] 2025-10-09 12:21:48,190 | INFO     | [job] validate thread has finished
[2025-10-09 05:22:16] 2025-10-09 12:21:48,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 05:22:16] 2025-10-09 12:21:48,382 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 05:22:16] 2025-10-09 12:21:52,352 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 05:22:16] 2025-10-09 12:22:05,919 | INFO     | [monitor] cgroup control has ended
[2025-10-09 05:22:16] 2025-10-09 12:22:07,638 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140092202317632)>', '<ExcThread(monitor, started 140091154491136)>']
[2025-10-09 05:22:16] 2025-10-09 12:22:12,663 | INFO     | all workflow threads have been joined
[2025-10-09 05:22:16] 2025-10-09 12:22:12,663 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 05:22:16] 2025-10-09 12:22:12,664 | INFO     | traces error code: 0
[2025-10-09 05:22:16] 2025-10-09 12:22:12,664 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 05:22:16] 2025-10-09 12:22:15,963 | INFO     | PID=3041228 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 05:22:16] 2025-10-09 12:22:15,964 | INFO     | .. there are 19 such processes running
[2025-10-09 05:22:16] 2025-10-09 12:22:15,964 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 05:22:16] 2025-10-09 12:22:15,964 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 05:22:16] 2025-10-09 12:22:15,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 05:22:16] 2025-10-09 12:22:15,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 05:22:16] 2025-10-09 12:22:15,965 | CRITICAL | thread 'MainThread' is not alive
[2025-10-09 05:22:16] 2025-10-09 12:22:15,965 | INFO     | [monitor] control thread has ended
[2025-10-09 05:22:16] 2025-10-09 12:22:16,068 [wrapper] ==== pilot stdout END ====
[2025-10-09 05:22:16] 2025-10-09 12:22:16,070 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 05:22:16] 2025-10-09 12:22:16,072 [wrapper] pilotpid: 3041228
[2025-10-09 05:22:16] 2025-10-09 12:22:16,074 [wrapper] Pilot exit status: 0
[2025-10-09 05:22:16] 2025-10-09 12:22:16,081 [wrapper] pandaids: 6837331620
[2025-10-09 05:22:16] 2025-10-09 12:22:16,113 [wrapper] cleanup supervisor_pilot 3041234 3041229
[2025-10-09 05:22:16] 2025-10-09 12:22:16,115 [wrapper] Test setup, not cleaning
[2025-10-09 05:22:16] 2025-10-09 12:22:16,117 [wrapper] apfmon messages muted
[2025-10-09 05:22:16] 2025-10-09 12:22:16,119 [wrapper] ==== wrapper stdout END ====
[2025-10-09 05:22:16] 2025-10-09 12:22:16,121 [wrapper] ==== wrapper stderr END ====
[2025-10-09 05:22:16]  *** Error codes and diagnostics ***
[2025-10-09 05:22:16]     "exeErrorCode": 65,
[2025-10-09 05:22:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 05:22:16]     "pilotErrorCode": 1305,
[2025-10-09 05:22:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 05:22:16]  *** Listing of results directory ***
[2025-10-09 05:22:16] total 220472
[2025-10-09 05:22:16] -rw-r--r--. 1 boinc boinc    563267 Oct  7 00:02 pilot3.tar.gz
[2025-10-09 05:22:16] -rw-r--r--. 1 boinc boinc      5112 Oct  9 03:51 queuedata.json
[2025-10-09 05:22:16] -rwx------. 1 boinc boinc     36292 Oct  9 03:55 runpilot2-wrapper.sh
[2025-10-09 05:22:16] -rw-r--r--. 1 boinc boinc       100 Oct  9 05:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 05:22:16] -rwxr-xr-x. 1 boinc boinc      7986 Oct  9 05:18 run_atlas
[2025-10-09 05:22:16] -rw-r--r--. 1 boinc boinc       105 Oct  9 05:18 job.xml
[2025-10-09 05:22:16] -rw-r--r--. 1 boinc boinc      6444 Oct  9 05:18 init_data.xml
[2025-10-09 05:22:16] -rw-r--r--. 2 boinc boinc 221652867 Oct  9 05:18 EVNT.46676267._000612.pool.root.1
[2025-10-09 05:22:16] -rw-r--r--. 2 boinc boinc     15120 Oct  9 05:18 start_atlas.sh
[2025-10-09 05:22:16] drwxrwx--x. 2 boinc boinc      4096 Oct  9 05:18 shared
[2025-10-09 05:22:16] -rw-r--r--. 2 boinc boinc    576713 Oct  9 05:18 input.tar.gz
[2025-10-09 05:22:16] -rw-r--r--. 1 boinc boinc         0 Oct  9 05:18 boinc_lockfile
[2025-10-09 05:22:16] -rw-r--r--. 1 boinc boinc      2550 Oct  9 05:18 pandaJob.out
[2025-10-09 05:22:16] -rw-------. 1 boinc boinc    975454 Oct  9 05:19 agis_schedconf.cvmfs.json
[2025-10-09 05:22:16] -rw-------. 1 boinc boinc   1560401 Oct  9 05:19 agis_ddmendpoints.agis.ALL.json
[2025-10-09 05:22:16] drwx------. 4 boinc boinc      4096 Oct  9 05:19 pilot3
[2025-10-09 05:22:16] -rw-r--r--. 1 boinc boinc       522 Oct  9 05:19 boinc_task_state.xml
[2025-10-09 05:22:16] -rw-------. 1 boinc boinc       951 Oct  9 05:19 memory_monitor_summary.json
[2025-10-09 05:22:16] -rw-------. 1 boinc boinc     20774 Oct  9 05:19 log.46676269._014936.job.log.tgz.1
[2025-10-09 05:22:16] -rw-------. 1 boinc boinc      8373 Oct  9 05:21 heartbeat.json
[2025-10-09 05:22:16] -rw-r--r--. 1 boinc boinc        22 Oct  9 05:22 wrapper_checkpoint.txt
[2025-10-09 05:22:16] -rw-r--r--. 1 boinc boinc      8192 Oct  9 05:22 boinc_mmap_file
[2025-10-09 05:22:16] -rw-------. 1 boinc boinc       893 Oct  9 05:22 pilotlog.txt
[2025-10-09 05:22:16] -rw-------. 1 boinc boinc        95 Oct  9 05:22 pilot_heartbeat.json
[2025-10-09 05:22:16] -rw-------. 1 boinc boinc     81752 Oct  9 05:22 log.46676269._014936.job.log.1
[2025-10-09 05:22:16] -rw-------. 1 boinc boinc       188 Oct  9 05:22 output.list
[2025-10-09 05:22:16] -rw-r--r--. 1 boinc boinc       620 Oct  9 05:22 runtime_log
[2025-10-09 05:22:16] -rw-------. 1 boinc boinc    122880 Oct  9 05:22 result.tar.gz
[2025-10-09 05:22:16] -rw-r--r--. 1 boinc boinc      8526 Oct  9 05:22 runtime_log.err
[2025-10-09 05:22:16] -rw-------. 1 boinc boinc       645 Oct  9 05:22 lzoMDmcU3Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLgNMDmp52FZm.diag
[2025-10-09 05:22:16] -rw-r--r--. 1 boinc boinc     21604 Oct  9 05:22 stderr.txt
[2025-10-09 05:22:16] No HITS result produced
[2025-10-09 05:22:16]  *** Contents of shared directory: ***
[2025-10-09 05:22:16] total 217164
[2025-10-09 05:22:16] -rw-r--r--. 2 boinc boinc 221652867 Oct  9 05:18 ATLAS.root_0
[2025-10-09 05:22:16] -rw-r--r--. 2 boinc boinc     15120 Oct  9 05:18 start_atlas.sh
[2025-10-09 05:22:16] -rw-r--r--. 2 boinc boinc    576713 Oct  9 05:18 input.tar.gz
[2025-10-09 05:22:16] -rw-------. 1 boinc boinc    122880 Oct  9 05:22 result.tar.gz
05:22:17 (3037578): run_atlas exited; CPU time 23.033756
05:22:17 (3037578): called boinc_finish(0)

</stderr_txt>
]]>

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