Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:52:22 (4146626): wrapper (7.7.26015): starting
06:52:22 (4146626): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 06:52:22] Arguments: --nthreads 8
[2025-10-09 06:52:22] Threads: 8
[2025-10-09 06:52:22] Checking for CVMFS
[2025-10-09 06:52:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 06:52:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 06:52:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 06:52:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 06:52:23] 2.13.2.0 3821245 124846 290168 151509 1 557 15031147 21042176 20960 16776704 0 71048152 99.332 126034071 31129 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 06:52:23] CVMFS is ok
[2025-10-09 06:52:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 06:52:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 06:52:23] Further information can be found at the LHC@home message board.
[2025-10-09 06:52:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 06:52:23] Checking for apptainer binary...
[2025-10-09 06:52:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 06:52:23] Running /usr/bin/apptainer --version
[2025-10-09 06:52:23] apptainer version 1.4.2-1.el9
[2025-10-09 06:52:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 06:52:23] c-6-1.aglt2.org
[2025-10-09 06:52:23] apptainer works
[2025-10-09 06:52:23] Set ATHENA_PROC_NUMBER=8
[2025-10-09 06:52:23] Set ATHENA_CORE_NUMBER=8
[2025-10-09 06:52:23] Starting ATLAS job with PandaID=6837324555
[2025-10-09 06:52:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
09:04:27 (917854): wrapper (7.7.26015): starting
09:04:27 (917854): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 09:04:27] Arguments: --nthreads 8
[2025-10-11 09:04:27] Threads: 8
[2025-10-11 09:04:27] This job has been restarted, cleaning up previous attempt
[2025-10-11 09:04:27] Checking for CVMFS
[2025-10-11 09:04:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 09:04:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 09:04:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 09:04:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 09:04:31] 2.13.2.0 3821245 127858 307724 151584 1 647 19701686 21042176 24756 16776704 0 78795308 99.352 136737112 30979 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 09:04:31] CVMFS is ok
[2025-10-11 09:04:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 09:04:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 09:04:31] Further information can be found at the LHC@home message board.
[2025-10-11 09:04:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 09:04:31] Checking for apptainer binary...
[2025-10-11 09:04:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 09:04:31] Running /usr/bin/apptainer --version
[2025-10-11 09:04:31] apptainer version 1.4.2-1.el9
[2025-10-11 09:04:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 09:04:32] c-6-1.aglt2.org
[2025-10-11 09:04:32] apptainer works
[2025-10-11 09:04:32] Set ATHENA_PROC_NUMBER=8
[2025-10-11 09:04:32] Set ATHENA_CORE_NUMBER=8
[2025-10-11 09:04:32] Starting ATLAS job with PandaID=6837324555
[2025-10-11 09:04:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:03:09]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:03:09] 2025-10-12 02:02:36,659 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 22:03:09] 2025-10-12 02:02:36,661 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 22:03:09] 2025-10-12 02:02:36,661 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:03:09] 2025-10-12 02:02:36,734 | INFO     | fitting pss+swap vs Time
[2025-10-11 22:03:09] 2025-10-12 02:02:36,738 | INFO     | sum of square deviations: 136115061842.6523
[2025-10-11 22:03:09] 2025-10-12 02:02:36,761 | INFO     | sum of deviations: 660115122313.7687
[2025-10-11 22:03:09] 2025-10-12 02:02:36,761 | INFO     | mean x: 1760211378.9578948
[2025-10-11 22:03:09] 2025-10-12 02:02:36,761 | INFO     | mean y: 2075093.430263158
[2025-10-11 22:03:09] 2025-10-12 02:02:36,762 | INFO     | -- intersect: -8534394963.513706
[2025-10-11 22:03:09] 2025-10-12 02:02:36,762 | INFO     | intersect: -8534394963.513706
[2025-10-11 22:03:09] 2025-10-12 02:02:36,763 | INFO     | chi2: 7.767096120310306
[2025-10-11 22:03:09] 2025-10-12 02:02:36,764 | INFO     | sum of square deviations: 133446197161.51778
[2025-10-11 22:03:09] 2025-10-12 02:02:36,794 | INFO     | sum of deviations: 699615688972.6246
[2025-10-11 22:03:09] 2025-10-12 02:02:36,795 | INFO     | mean x: 1760211226.4596026
[2025-10-11 22:03:09] 2025-10-12 02:02:36,795 | INFO     | mean y: 2077338.4794701987
[2025-10-11 22:03:09] 2025-10-12 02:02:36,795 | INFO     | -- intersect: -9226146590.94702
[2025-10-11 22:03:09] 2025-10-12 02:02:36,795 | INFO     | intersect: -9226146590.94702
[2025-10-11 22:03:09] 2025-10-12 02:02:36,796 | INFO     | chi2: 7.11888986831911
[2025-10-11 22:03:09] 2025-10-12 02:02:36,796 | INFO     | current chi2=7.11888986831911 (change=8.345541782290951 %)
[2025-10-11 22:03:09] 2025-10-12 02:02:36,796 | INFO     | right removable region: 754
[2025-10-11 22:03:09] 2025-10-12 02:02:36,797 | INFO     | sum of square deviations: 133446077479.51776
[2025-10-11 22:03:09] 2025-10-12 02:02:36,832 | INFO     | sum of deviations: 453325111743.94434
[2025-10-11 22:03:09] 2025-10-12 02:02:36,832 | INFO     | mean x: 1760211531.4596026
[2025-10-11 22:03:09] 2025-10-12 02:02:36,832 | INFO     | mean y: 2086904.0145695363
[2025-10-11 22:03:09] 2025-10-12 02:02:36,832 | INFO     | -- intersect: -5977467566.699479
[2025-10-11 22:03:09] 2025-10-12 02:02:36,833 | INFO     | intersect: -5977467566.699479
[2025-10-11 22:03:09] 2025-10-12 02:02:36,834 | INFO     | chi2: 3.9030557671531687
[2025-10-11 22:03:09] 2025-10-12 02:02:36,834 | INFO     | current chi2=3.9030557671531687 (change=49.748841694555516 %)
[2025-10-11 22:03:09] 2025-10-12 02:02:36,839 | INFO     | sum of square deviations: 130812302285.71855
[2025-10-11 22:03:09] 2025-10-12 02:02:36,858 | INFO     | sum of deviations: 324888654878.84094
[2025-10-11 22:03:09] 2025-10-12 02:02:36,859 | INFO     | mean x: 1760211683.9586666
[2025-10-11 22:03:09] 2025-10-12 02:02:36,859 | INFO     | mean y: 2094336.8013333334
[2025-10-11 22:03:09] 2025-10-12 02:02:36,859 | INFO     | -- intersect: -4369610742.238354
[2025-10-11 22:03:09] 2025-10-12 02:02:36,859 | INFO     | intersect: -4369610742.238354
[2025-10-11 22:03:09] 2025-10-12 02:02:36,860 | INFO     | chi2: 2.4834944632886256
[2025-10-11 22:03:09] 2025-10-12 02:02:36,860 | INFO     | current chi2=2.4834944632886256 (change=36.37051040395332 %)
[2025-10-11 22:03:09] 2025-10-12 02:02:36,861 | INFO     | sum of square deviations: 128213320089.0818
[2025-10-11 22:03:09] 2025-10-12 02:02:36,886 | INFO     | sum of deviations: 258474033841.8081
[2025-10-11 22:03:09] 2025-10-12 02:02:36,886 | INFO     | mean x: 1760211836.4604027
[2025-10-11 22:03:09] 2025-10-12 02:02:36,886 | INFO     | mean y: 2098234.7731543626
[2025-10-11 22:03:09] 2025-10-12 02:02:36,886 | INFO     | -- intersect: -3546433645.299117
[2025-10-11 22:03:09] 2025-10-12 02:02:36,886 | INFO     | intersect: -3546433645.299117
[2025-10-11 22:03:09] 2025-10-12 02:02:36,887 | INFO     | chi2: 2.1346757629457875
[2025-10-11 22:03:09] 2025-10-12 02:02:36,888 | INFO     | current chi2=2.1346757629457875 (change=14.045479283289191 %)
[2025-10-11 22:03:09] 2025-10-12 02:02:36,888 | INFO     | left removable region: 30
[2025-10-11 22:03:09] 2025-10-12 02:02:36,889 | INFO     | sum of square deviations: 117673615277.83876
[2025-10-11 22:03:09] 2025-10-12 02:02:36,902 | INFO     | sum of deviations: 151492504860.09262
[2025-10-11 22:03:09] 2025-10-12 02:02:36,903 | INFO     | mean x: 1760212110.9599447
[2025-10-11 22:03:09] 2025-10-12 02:02:36,903 | INFO     | mean y: 2109468.3135359115
[2025-10-11 22:03:09] 2025-10-12 02:02:36,903 | INFO     | -- intersect: -2263980012.7038174
[2025-10-11 22:03:09] 2025-10-12 02:02:36,903 | INFO     | intersect: -2263980012.7038174
[2025-10-11 22:03:09] 2025-10-12 02:02:36,904 | INFO     | chi2: 0.8088235856658058
[2025-10-11 22:03:09] 2025-10-12 02:02:36,904 | INFO     | -- intersect: -2263980012.7038174
[2025-10-11 22:03:09] 2025-10-12 02:02:36,904 | INFO     | current memory leak: 1.29 B/s (using 724 data points, chi2=0.81)
[2025-10-11 22:03:09] 2025-10-12 02:02:36,905 | INFO     | could have reported an average CPU frequency of 2600 MHz (29 samples)
[2025-10-11 22:03:09] 2025-10-12 02:02:36,906 | INFO     | ..............................
[2025-10-11 22:03:09] 2025-10-12 02:02:36,906 | INFO     | . Timing measurements:
[2025-10-11 22:03:09] 2025-10-12 02:02:36,906 | INFO     | . get job = 1 s
[2025-10-11 22:03:09] 2025-10-12 02:02:36,906 | INFO     | . initial setup = 9 s
[2025-10-11 22:03:09] 2025-10-12 02:02:36,906 | INFO     | . payload setup = 77 s
[2025-10-11 22:03:09] 2025-10-12 02:02:36,906 | INFO     | . stage-in = 0 s
[2025-10-11 22:03:09] 2025-10-12 02:02:36,906 | INFO     | . payload execution = 46352 s
[2025-10-11 22:03:09] 2025-10-12 02:02:36,906 | INFO     | . stage-out = 3 s
[2025-10-11 22:03:09] 2025-10-12 02:02:36,906 | INFO     | . log creation = 0 s
[2025-10-11 22:03:09] 2025-10-12 02:02:36,907 | INFO     | ..............................
[2025-10-11 22:03:09] 2025-10-12 02:02:37,013 | INFO     | 
[2025-10-11 22:03:09] 2025-10-12 02:02:37,014 | INFO     | job summary report
[2025-10-11 22:03:09] 2025-10-12 02:02:37,014 | INFO     | --------------------------------------------------
[2025-10-11 22:03:09] 2025-10-12 02:02:37,014 | INFO     | PanDA job id: 6837324555
[2025-10-11 22:03:09] 2025-10-12 02:02:37,014 | INFO     | task id: 46676269
[2025-10-11 22:03:09] 2025-10-12 02:02:37,014 | INFO     | errors: (none)
[2025-10-11 22:03:09] 2025-10-12 02:02:37,014 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:03:09] 2025-10-12 02:02:37,014 | INFO     | pilot state: finished 
[2025-10-11 22:03:09] 2025-10-12 02:02:37,014 | INFO     | transexitcode: 0
[2025-10-11 22:03:09] 2025-10-12 02:02:37,014 | INFO     | exeerrorcode: 0
[2025-10-11 22:03:09] 2025-10-12 02:02:37,015 | INFO     | exeerrordiag: 
[2025-10-11 22:03:09] 2025-10-12 02:02:37,015 | INFO     | exitcode: 0
[2025-10-11 22:03:09] 2025-10-12 02:02:37,015 | INFO     | exitmsg: OK
[2025-10-11 22:03:09] 2025-10-12 02:02:37,015 | INFO     | cpuconsumptiontime: 50555 s
[2025-10-11 22:03:09] 2025-10-12 02:02:37,015 | INFO     | nevents: 400
[2025-10-11 22:03:09] 2025-10-12 02:02:37,015 | INFO     | neventsw: 0
[2025-10-11 22:03:09] 2025-10-12 02:02:37,015 | INFO     | pid: 936656
[2025-10-11 22:03:09] 2025-10-12 02:02:37,015 | INFO     | pgrp: 936656
[2025-10-11 22:03:09] 2025-10-12 02:02:37,015 | INFO     | corecount: 8
[2025-10-11 22:03:09] 2025-10-12 02:02:37,016 | INFO     | event service: False
[2025-10-11 22:03:09] 2025-10-12 02:02:37,016 | INFO     | sizes: {0: 2348028, 1: 2348629, 2: 2348713, 3: 2348769, 4: 2348769, 5: 2349124, 16: 2349124, 27: 2349152, 39: 2349180, 51: 2349208, 53: 2349498, 63: 2349806, 46434
[2025-10-11 22:03:09] 2025-10-12 02:02:37,016 | INFO     | --------------------------------------------------
[2025-10-11 22:03:09] 2025-10-12 02:02:37,016 | INFO     | 
[2025-10-11 22:03:09] 2025-10-12 02:02:37,016 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 22:03:09] 2025-10-12 02:02:37,036 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,036 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,036 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,036 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,037 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,038 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,038 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:03:09] 2025-10-12 02:02:37,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,038 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:03:09] 2025-10-12 02:02:37,039 | INFO     | job 6837324555 has completed (purged errors)
[2025-10-11 22:03:09] 2025-10-12 02:02:37,039 | INFO     | overall cleanup function is called
[2025-10-11 22:03:09] 2025-10-12 02:02:38,049 | INFO     | --- collectZombieJob: --- 10, [936656]
[2025-10-11 22:03:09] 2025-10-12 02:02:38,049 | INFO     | zombie collector waiting for pid 936656
[2025-10-11 22:03:09] 2025-10-12 02:02:38,050 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:03:09] 2025-10-12 02:02:38,050 | INFO     | collected zombie processes
[2025-10-11 22:03:09] 2025-10-12 02:02:38,050 | INFO     | will attempt to kill all subprocesses of pid=936656
[2025-10-11 22:03:09] 2025-10-12 02:02:38,522 | INFO     | process IDs to be killed: [936656] (in reverse order)
[2025-10-11 22:03:09] 2025-10-12 02:02:38,849 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:03:09] 2025-10-12 02:02:38,850 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:03:09] 2025-10-12 02:02:38,881 | INFO     | did not find any defunct processes belonging to 936656
[2025-10-11 22:03:09] 2025-10-12 02:02:38,915 | INFO     | did not find any defunct processes belonging to 936656
[2025-10-11 22:03:09] 2025-10-12 02:02:38,916 | INFO     | ready for new job
[2025-10-11 22:03:09] 2025-10-12 02:02:38,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:03:09] 2025-10-12 02:02:38,923 | INFO     | ***************************************
[2025-10-11 22:03:09] 2025-10-12 02:02:38,924 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:03:09] 2025-10-12 02:02:38,924 | INFO     | ***************************************
[2025-10-11 22:03:09] 2025-10-12 02:02:38,924 | INFO     | 
[2025-10-11 22:03:09] 2025-10-12 02:02:38,952 | INFO     | architecture information:
[2025-10-11 22:03:09] 2025-10-12 02:02:38,952 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:03:09] 2025-10-12 02:02:38,986 | INFO     | cat /etc/os-release:
[2025-10-11 22:03:09] NAME="CentOS Linux"
[2025-10-11 22:03:09] VERSION="7 (Core)"
[2025-10-11 22:03:09] ID="centos"
[2025-10-11 22:03:09] ID_LIKE="rhel fedora"
[2025-10-11 22:03:09] VERSION_ID="7"
[2025-10-11 22:03:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:03:09] ANSI_COLOR="0;31"
[2025-10-11 22:03:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:03:09] HOME_URL="https://www.centos.org/"
[2025-10-11 22:03:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:03:09] 
[2025-10-11 22:03:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:03:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:03:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:03:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:03:09] 
[2025-10-11 22:03:09] 2025-10-12 02:02:38,987 | INFO     | ***************************************
[2025-10-11 22:03:09] 2025-10-12 02:02:39,491 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 22:03:09] 2025-10-12 02:02:39,537 | INFO     | sufficient remaining disk space (52956233728 B)
[2025-10-11 22:03:09] 2025-10-12 02:02:39,538 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:03:09] 2025-10-12 02:02:39,538 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:03:09] 2025-10-12 02:02:39,538 | INFO     | update_server=False
[2025-10-11 22:03:09] 2025-10-12 02:02:39,538 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:03:09] 2025-10-12 02:02:39,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:03:09] 2025-10-12 02:02:39,680 | INFO     | all data control threads have been joined
[2025-10-11 22:03:09] 2025-10-12 02:02:39,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:03:09] 2025-10-12 02:02:39,715 | INFO     | all job control threads have been joined
[2025-10-11 22:03:09] 2025-10-12 02:02:39,718 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:03:09] 2025-10-12 02:02:39,723 | INFO     | aborting loop
[2025-10-11 22:03:09] 2025-10-12 02:02:40,494 | INFO     | all payload control threads have been joined
[2025-10-11 22:03:09] 2025-10-12 02:02:40,549 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:03:09] 2025-10-12 02:02:40,556 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:03:09] 2025-10-12 02:02:40,663 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:03:09] 2025-10-12 02:02:40,686 | INFO     | [data] control thread has finished
[2025-10-11 22:03:09] 2025-10-12 02:02:40,721 | INFO     | [job] control thread has finished
[2025-10-11 22:03:09] 2025-10-12 02:02:40,731 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:03:09] 2025-10-12 02:02:40,737 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:03:09] 2025-10-12 02:02:40,807 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:03:09] 2025-10-12 02:02:41,137 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:03:09] 2025-10-12 02:02:41,500 | INFO     | [payload] control thread has finished
[2025-10-11 22:03:09] 2025-10-12 02:02:41,687 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:03:09] 2025-10-12 02:02:41,705 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:03:09] 2025-10-12 02:02:41,759 | INFO     | [job] validate thread has finished
[2025-10-11 22:03:09] 2025-10-12 02:02:41,986 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:03:09] 2025-10-12 02:02:42,029 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:03:09] 2025-10-12 02:02:43,035 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:03:09] 2025-10-12 02:02:43,552 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:03:09] 2025-10-12 02:03:02,232 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:03:09] 2025-10-12 02:03:03,337 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140280211326784)>', '<ExcThread(monitor, started 140279688435456)>']
[2025-10-11 22:03:09] 2025-10-12 02:03:08,373 | INFO     | all workflow threads have been joined
[2025-10-11 22:03:09] 2025-10-12 02:03:08,373 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:03:09] 2025-10-12 02:03:08,374 | INFO     | traces error code: 0
[2025-10-11 22:03:09] 2025-10-12 02:03:08,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:03:09] 2025-10-12 02:03:08,597 | INFO     | PID=923110 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 22:03:09] 2025-10-12 02:03:08,598 | INFO     | .. there are 39 such processes running
[2025-10-11 22:03:09] 2025-10-12 02:03:08,598 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:03:09] 2025-10-12 02:03:08,598 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:03:09] 2025-10-12 02:03:08,598 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:03:09] 2025-10-12 02:03:08,598 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:03:09] 2025-10-12 02:03:08,599 | INFO     | [monitor] control thread has ended
[2025-10-11 22:03:09] 2025-10-12 02:03:08,772 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:03:09] 2025-10-12 02:03:08,775 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:03:09] 2025-10-12 02:03:08,779 [wrapper] pilotpid: 923110
[2025-10-11 22:03:09] 2025-10-12 02:03:08,782 [wrapper] Pilot exit status: 0
[2025-10-11 22:03:09] 2025-10-12 02:03:08,812 [wrapper] pandaids: 6837324555
[2025-10-11 22:03:09] 2025-10-12 02:03:08,901 [wrapper] cleanup supervisor_pilot 3190813 923111
[2025-10-11 22:03:09] 2025-10-12 02:03:08,904 [wrapper] Test setup, not cleaning
[2025-10-11 22:03:09] 2025-10-12 02:03:08,928 [wrapper] apfmon messages muted
[2025-10-11 22:03:09] 2025-10-12 02:03:08,933 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:03:09] 2025-10-12 02:03:08,969 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:03:09]  *** Error codes and diagnostics ***
[2025-10-11 22:03:09]     "exeErrorCode": 0,
[2025-10-11 22:03:09]     "exeErrorDiag": "",
[2025-10-11 22:03:09]     "pilotErrorCode": 0,
[2025-10-11 22:03:09]     "pilotErrorDiag": "",
[2025-10-11 22:03:09]  *** Listing of results directory ***
[2025-10-11 22:03:09] total 639856
[2025-10-11 22:03:09] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 06:27 pilot3.tar.gz
[2025-10-11 22:03:09] -rwx------. 1 boincer umatlas     36292 Oct  9 06:41 runpilot2-wrapper.sh
[2025-10-11 22:03:09] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 06:43 queuedata.json
[2025-10-11 22:03:09] -rw-r--r--. 1 boincer umatlas       100 Oct  9 06:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:03:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 06:52 run_atlas
[2025-10-11 22:03:09] -rw-r--r--. 1 boincer umatlas       105 Oct  9 06:52 job.xml
[2025-10-11 22:03:09] -rw-r--r--. 3 boincer umatlas 222690547 Oct  9 06:52 EVNT.46676267._000520.pool.root.1
[2025-10-11 22:03:09] -rw-r--r--. 3 boincer umatlas 222690547 Oct  9 06:52 ATLAS.root_0
[2025-10-11 22:03:09] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 06:52 start_atlas.sh
[2025-10-11 22:03:09] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 06:52 shared
[2025-10-11 22:03:09] -rw-r--r--. 2 boincer umatlas    569685 Oct  9 06:52 input.tar.gz
[2025-10-11 22:03:09] -rw-r--r--. 1 boincer umatlas         0 Oct  9 06:52 boinc_lockfile
[2025-10-11 22:03:09] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 09:04 pandaJob.out
[2025-10-11 22:03:09] -rw-------. 1 boincer umatlas    975504 Oct 11 09:06 agis_schedconf.cvmfs.json
[2025-10-11 22:03:09] drwx------. 5 boincer umatlas      4096 Oct 11 09:06 pilot3
[2025-10-11 22:03:09] -rw-------. 1 boincer umatlas 194070902 Oct 11 22:01 HITS.46676269._012825.pool.root.1
[2025-10-11 22:03:09] -rw-r--r--. 1 boincer umatlas      6657 Oct 11 22:01 init_data.xml
[2025-10-11 22:03:09] -rw-r--r--. 1 boincer umatlas       531 Oct 11 22:01 boinc_task_state.xml
[2025-10-11 22:03:09] -rw-------. 1 boincer umatlas      1056 Oct 11 22:02 memory_monitor_summary.json
[2025-10-11 22:03:09] -rw-------. 1 boincer umatlas   1560580 Oct 11 22:02 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:03:09] -rw-------. 1 boincer umatlas    842875 Oct 11 22:02 log.46676269._012825.job.log.tgz.1
[2025-10-11 22:03:09] -rw-------. 1 boincer umatlas        95 Oct 11 22:02 pilot_heartbeat.json
[2025-10-11 22:03:09] -rw-------. 1 boincer umatlas      7854 Oct 11 22:02 heartbeat.json
[2025-10-11 22:03:09] -rw-r--r--. 1 boincer umatlas        28 Oct 11 22:03 wrapper_checkpoint.txt
[2025-10-11 22:03:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 22:03 boinc_mmap_file
[2025-10-11 22:03:09] -rw-------. 1 boincer umatlas       822 Oct 11 22:03 pilotlog.txt
[2025-10-11 22:03:09] -rw-------. 1 boincer umatlas   5090836 Oct 11 22:03 log.46676269._012825.job.log.1
[2025-10-11 22:03:09] -rw-------. 1 boincer umatlas       357 Oct 11 22:03 output.list
[2025-10-11 22:03:09] -rw-r--r--. 1 boincer umatlas       620 Oct 11 22:03 runtime_log
[2025-10-11 22:03:09] -rw-------. 1 boincer umatlas   5949440 Oct 11 22:03 result.tar.gz
[2025-10-11 22:03:09] -rw-r--r--. 1 boincer umatlas      8774 Oct 11 22:03 runtime_log.err
[2025-10-11 22:03:09] -rw-------. 1 boincer umatlas       785 Oct 11 22:03 KqiNDmkG3Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVAZNDmWHoLCn.diag
[2025-10-11 22:03:09] -rw-r--r--. 1 boincer umatlas     23172 Oct 11 22:03 stderr.txt
[2025-10-11 22:03:09] HITS file was successfully produced:
[2025-10-11 22:03:09] -rw-------. 1 boincer umatlas 194070902 Oct 11 22:01 shared/HITS.pool.root.1
[2025-10-11 22:03:09]  *** Contents of shared directory: ***
[2025-10-11 22:03:09] total 413388
[2025-10-11 22:03:09] -rw-r--r--. 3 boincer umatlas 222690547 Oct  9 06:52 ATLAS.root_0
[2025-10-11 22:03:09] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 06:52 start_atlas.sh
[2025-10-11 22:03:09] -rw-r--r--. 2 boincer umatlas    569685 Oct  9 06:52 input.tar.gz
[2025-10-11 22:03:09] -rw-------. 1 boincer umatlas 194070902 Oct 11 22:01 HITS.pool.root.1
[2025-10-11 22:03:09] -rw-------. 1 boincer umatlas   5949440 Oct 11 22:03 result.tar.gz
22:03:11 (917854): run_atlas exited; CPU time 52415.551831
22:03:11 (917854): called boinc_finish(0)

</stderr_txt>
]]>

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