Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
12:56:45 (244863): wrapper (7.7.26015): starting
12:56:45 (244863): wrapper: running run_atlas (--nthreads 6)
[2025-10-09 12:56:45] Arguments: --nthreads 6
[2025-10-09 12:56:45] Threads: 6
[2025-10-09 12:56:45] Checking for CVMFS
[2025-10-09 12:56:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 12:56:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 12:56:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 12:56:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 12:56:49] 2.11.5.0 245061 0 25360 151509 3 1 3136679 4096000 0 130560 0 0 0.000 1291 991 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-09 12:56:49] CVMFS is ok
[2025-10-09 12:56:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 12:56:49] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-09 12:56:49] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-09 12:56:49] Further information can be found at the LHC@home message board.
[2025-10-09 12:56:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 12:56:49] Checking for apptainer binary...
[2025-10-09 12:56:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 12:56:49] Running /usr/bin/apptainer --version
[2025-10-09 12:56:49] apptainer version 1.4.2-1.fc42
[2025-10-09 12:56:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 12:56:49] S15L
[2025-10-09 12:56:49] apptainer works
[2025-10-09 12:56:49] Set ATHENA_PROC_NUMBER=6
[2025-10-09 12:56:49] Set ATHENA_CORE_NUMBER=6
[2025-10-09 12:56:49] Starting ATLAS job with PandaID=6837324542
[2025-10-09 12:56:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 17:12:29]  *** The last 200 lines of the pilot log: ***
[2025-10-09 17:12:29] 2025-10-09 15:11:36,421 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 17:12:29] 2025-10-09 15:11:36,424 | INFO     | fitting pss+swap vs Time
[2025-10-09 17:12:29] 2025-10-09 15:11:36,424 | INFO     | sum of square deviations: 4844974562.5
[2025-10-09 17:12:29] 2025-10-09 15:11:36,426 | INFO     | sum of deviations: 22155113197.0
[2025-10-09 17:12:29] 2025-10-09 15:11:36,426 | INFO     | mean x: 1760015035.5
[2025-10-09 17:12:29] 2025-10-09 15:11:36,426 | INFO     | mean y: 2439724.592
[2025-10-09 17:12:29] 2025-10-09 15:11:36,426 | INFO     | -- intersect: -8045761940.228293
[2025-10-09 17:12:29] 2025-10-09 15:11:36,426 | INFO     | intersect: -8045761940.228293
[2025-10-09 17:12:29] 2025-10-09 15:11:36,426 | INFO     | chi2: 1.1632070035949922
[2025-10-09 17:12:29] 2025-10-09 15:11:36,427 | INFO     | sum of square deviations: 4560048290.0
[2025-10-09 17:12:29] 2025-10-09 15:11:36,428 | INFO     | sum of deviations: 21534537017.00001
[2025-10-09 17:12:29] 2025-10-09 15:11:36,428 | INFO     | mean x: 1760014883.0
[2025-10-09 17:12:29] 2025-10-09 15:11:36,428 | INFO     | mean y: 2439392.4
[2025-10-09 17:12:29] 2025-10-09 15:11:36,428 | INFO     | -- intersect: -8309118564.4641905
[2025-10-09 17:12:29] 2025-10-09 15:11:36,428 | INFO     | intersect: -8309118564.4641905
[2025-10-09 17:12:29] 2025-10-09 15:11:36,428 | INFO     | chi2: 1.163620558946506
[2025-10-09 17:12:29] 2025-10-09 15:11:36,428 | INFO     | current chi2=1.163620558946506 (change=-0.0355530314239645 %)
[2025-10-09 17:12:29] 2025-10-09 15:11:36,429 | INFO     | right removable region: 244
[2025-10-09 17:12:29] 2025-10-09 15:11:36,429 | INFO     | sum of square deviations: 4560048290.0
[2025-10-09 17:12:29] 2025-10-09 15:11:36,430 | INFO     | sum of deviations: 2206707330.0
[2025-10-09 17:12:29] 2025-10-09 15:11:36,430 | INFO     | mean x: 1760015188.0
[2025-10-09 17:12:29] 2025-10-09 15:11:36,430 | INFO     | mean y: 2450199.506122449
[2025-10-09 17:12:29] 2025-10-09 15:11:36,430 | INFO     | -- intersect: -849259731.8970224
[2025-10-09 17:12:29] 2025-10-09 15:11:36,430 | INFO     | intersect: -849259731.8970224
[2025-10-09 17:12:29] 2025-10-09 15:11:36,431 | INFO     | chi2: 0.07323206921967655
[2025-10-09 17:12:29] 2025-10-09 15:11:36,431 | INFO     | current chi2=0.07323206921967655 (change=93.70429605449876 %)
[2025-10-09 17:12:29] 2025-10-09 15:11:36,431 | INFO     | sum of square deviations: 4286517580.0
[2025-10-09 17:12:29] 2025-10-09 15:11:36,432 | INFO     | sum of deviations: 9393004388.499998
[2025-10-09 17:12:29] 2025-10-09 15:11:36,432 | INFO     | mean x: 1760015340.5
[2025-10-09 17:12:29] 2025-10-09 15:11:36,432 | INFO     | mean y: 2446234.3958333335
[2025-10-09 17:12:29] 2025-10-09 15:11:36,432 | INFO     | -- intersect: -3854258306.9031243
[2025-10-09 17:12:29] 2025-10-09 15:11:36,433 | INFO     | intersect: -3854258306.9031243
[2025-10-09 17:12:29] 2025-10-09 15:11:36,433 | INFO     | chi2: 0.003950230720421059
[2025-10-09 17:12:29] 2025-10-09 15:11:36,433 | INFO     | current chi2=0.003950230720421059 (change=94.60587313384329 %)
[2025-10-09 17:12:29] 2025-10-09 15:11:36,433 | INFO     | sum of square deviations: 4024149870.0
[2025-10-09 17:12:29] 2025-10-09 15:11:36,434 | INFO     | sum of deviations: 7914690525.000001
[2025-10-09 17:12:29] 2025-10-09 15:11:36,434 | INFO     | mean x: 1760015493.0
[2025-10-09 17:12:29] 2025-10-09 15:11:36,434 | INFO     | mean y: 2447092.6
[2025-10-09 17:12:29] 2025-10-09 15:11:36,435 | INFO     | -- intersect: -3459148125.348557
[2025-10-09 17:12:29] 2025-10-09 15:11:36,435 | INFO     | intersect: -3459148125.348557
[2025-10-09 17:12:29] 2025-10-09 15:11:36,435 | INFO     | chi2: 0.0033685045710608215
[2025-10-09 17:12:29] 2025-10-09 15:11:36,435 | INFO     | current chi2=0.0033685045710608215 (change=14.72638411607083 %)
[2025-10-09 17:12:29] 2025-10-09 15:11:36,435 | INFO     | left removable region: 30
[2025-10-09 17:12:29] 2025-10-09 15:11:36,435 | INFO     | sum of square deviations: 3038856977.5
[2025-10-09 17:12:29] 2025-10-09 15:11:36,436 | INFO     | sum of deviations: 3804330605.5
[2025-10-09 17:12:29] 2025-10-09 15:11:36,436 | INFO     | mean x: 1760015767.5
[2025-10-09 17:12:29] 2025-10-09 15:11:36,437 | INFO     | mean y: 2449331.228971963
[2025-10-09 17:12:29] 2025-10-09 15:11:36,437 | INFO     | -- intersect: -2200906042.2019987
[2025-10-09 17:12:29] 2025-10-09 15:11:36,437 | INFO     | intersect: -2200906042.2019987
[2025-10-09 17:12:29] 2025-10-09 15:11:36,437 | INFO     | chi2: 0.0014151748255098425
[2025-10-09 17:12:29] 2025-10-09 15:11:36,437 | INFO     | -- intersect: -2200906042.2019987
[2025-10-09 17:12:29] 2025-10-09 15:11:36,437 | INFO     | current memory leak: 1.25 B/s (using 214 data points, chi2=0.00)
[2025-10-09 17:12:29] 2025-10-09 15:11:36,437 | INFO     | could have reported an average CPU frequency of 2202 MHz (12 samples)
[2025-10-09 17:12:29] 2025-10-09 15:11:36,438 | INFO     | ..............................
[2025-10-09 17:12:29] 2025-10-09 15:11:36,438 | INFO     | . Timing measurements:
[2025-10-09 17:12:29] 2025-10-09 15:11:36,438 | INFO     | . get job = 0 s
[2025-10-09 17:12:29] 2025-10-09 15:11:36,438 | INFO     | . initial setup = 1 s
[2025-10-09 17:12:29] 2025-10-09 15:11:36,438 | INFO     | . payload setup = 3 s
[2025-10-09 17:12:29] 2025-10-09 15:11:36,438 | INFO     | . stage-in = 0 s
[2025-10-09 17:12:29] 2025-10-09 15:11:36,438 | INFO     | . payload execution = 15243 s
[2025-10-09 17:12:29] 2025-10-09 15:11:36,438 | INFO     | . stage-out = 1 s
[2025-10-09 17:12:29] 2025-10-09 15:11:36,438 | INFO     | . log creation = 0 s
[2025-10-09 17:12:29] 2025-10-09 15:11:36,438 | INFO     | ..............................
[2025-10-09 17:12:29] 2025-10-09 15:11:36,709 | INFO     | 
[2025-10-09 17:12:29] 2025-10-09 15:11:36,709 | INFO     | job summary report
[2025-10-09 17:12:29] 2025-10-09 15:11:36,709 | INFO     | --------------------------------------------------
[2025-10-09 17:12:29] 2025-10-09 15:11:36,709 | INFO     | PanDA job id: 6837324542
[2025-10-09 17:12:29] 2025-10-09 15:11:36,710 | INFO     | task id: 46676269
[2025-10-09 17:12:29] 2025-10-09 15:11:36,710 | INFO     | errors: (none)
[2025-10-09 17:12:29] 2025-10-09 15:11:36,710 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 17:12:29] 2025-10-09 15:11:36,710 | INFO     | pilot state: finished 
[2025-10-09 17:12:29] 2025-10-09 15:11:36,710 | INFO     | transexitcode: 0
[2025-10-09 17:12:29] 2025-10-09 15:11:36,710 | INFO     | exeerrorcode: 0
[2025-10-09 17:12:29] 2025-10-09 15:11:36,710 | INFO     | exeerrordiag: 
[2025-10-09 17:12:29] 2025-10-09 15:11:36,710 | INFO     | exitcode: 0
[2025-10-09 17:12:29] 2025-10-09 15:11:36,710 | INFO     | exitmsg: OK
[2025-10-09 17:12:29] 2025-10-09 15:11:36,710 | INFO     | cpuconsumptiontime: 89437 s
[2025-10-09 17:12:29] 2025-10-09 15:11:36,710 | INFO     | nevents: 400
[2025-10-09 17:12:29] 2025-10-09 15:11:36,710 | INFO     | neventsw: 0
[2025-10-09 17:12:29] 2025-10-09 15:11:36,710 | INFO     | pid: 255677
[2025-10-09 17:12:29] 2025-10-09 15:11:36,711 | INFO     | pgrp: 255677
[2025-10-09 17:12:29] 2025-10-09 15:11:36,711 | INFO     | corecount: 6
[2025-10-09 17:12:29] 2025-10-09 15:11:36,711 | INFO     | event service: False
[2025-10-09 17:12:29] 2025-10-09 15:11:36,711 | INFO     | sizes: {0: 2348856, 3: 2349118, 11: 2349146, 15250: 2380329, 15252: 2389327, 15255: 2389383, 15262: 2389705}
[2025-10-09 17:12:29] 2025-10-09 15:11:36,711 | INFO     | --------------------------------------------------
[2025-10-09 17:12:29] 2025-10-09 15:11:36,711 | INFO     | 
[2025-10-09 17:12:29] 2025-10-09 15:11:36,711 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-09 17:12:29] 2025-10-09 15:11:36,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 17:12:29] 2025-10-09 15:11:36,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 17:12:29] 2025-10-09 15:11:36,725 | INFO     | job 6837324542 has completed (purged errors)
[2025-10-09 17:12:29] 2025-10-09 15:11:36,725 | INFO     | overall cleanup function is called
[2025-10-09 17:12:29] 2025-10-09 15:11:37,733 | INFO     | --- collectZombieJob: --- 10, [255677]
[2025-10-09 17:12:29] 2025-10-09 15:11:37,733 | INFO     | zombie collector waiting for pid 255677
[2025-10-09 17:12:29] 2025-10-09 15:11:37,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 17:12:29] 2025-10-09 15:11:37,733 | INFO     | collected zombie processes
[2025-10-09 17:12:29] 2025-10-09 15:11:37,733 | INFO     | will attempt to kill all subprocesses of pid=255677
[2025-10-09 17:12:29] 2025-10-09 15:11:37,817 | INFO     | process IDs to be killed: [255677] (in reverse order)
[2025-10-09 17:12:29] 2025-10-09 15:11:37,851 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 17:12:29] 2025-10-09 15:11:37,851 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 17:12:29] 2025-10-09 15:11:37,854 | INFO     | did not find any defunct processes belonging to 255677
[2025-10-09 17:12:29] 2025-10-09 15:11:37,857 | INFO     | did not find any defunct processes belonging to 255677
[2025-10-09 17:12:29] 2025-10-09 15:11:37,857 | INFO     | ready for new job
[2025-10-09 17:12:29] 2025-10-09 15:11:37,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 17:12:29] 2025-10-09 15:11:37,859 | INFO     | ***************************************
[2025-10-09 17:12:29] 2025-10-09 15:11:37,860 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 17:12:29] 2025-10-09 15:11:37,860 | INFO     | ***************************************
[2025-10-09 17:12:29] 2025-10-09 15:11:37,860 | INFO     | 
[2025-10-09 17:12:29] 2025-10-09 15:11:37,860 | INFO     | architecture information:
[2025-10-09 17:12:29] 2025-10-09 15:11:37,861 | INFO     | executing command: cat /etc/os-release
[2025-10-09 17:12:29] 2025-10-09 15:11:37,870 | INFO     | cat /etc/os-release:
[2025-10-09 17:12:29] NAME="CentOS Linux"
[2025-10-09 17:12:29] VERSION="7 (Core)"
[2025-10-09 17:12:29] ID="centos"
[2025-10-09 17:12:29] ID_LIKE="rhel fedora"
[2025-10-09 17:12:29] VERSION_ID="7"
[2025-10-09 17:12:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 17:12:29] ANSI_COLOR="0;31"
[2025-10-09 17:12:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 17:12:29] HOME_URL="https://www.centos.org/"
[2025-10-09 17:12:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 17:12:29] 
[2025-10-09 17:12:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 17:12:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 17:12:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 17:12:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 17:12:29] 
[2025-10-09 17:12:29] 2025-10-09 15:11:37,870 | INFO     | ***************************************
[2025-10-09 17:12:29] 2025-10-09 15:11:38,373 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-09 17:12:29] 2025-10-09 15:11:38,383 | INFO     | sufficient remaining disk space (979072188416 B)
[2025-10-09 17:12:29] 2025-10-09 15:11:38,384 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 17:12:29] 2025-10-09 15:11:38,384 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 17:12:29] 2025-10-09 15:11:38,384 | INFO     | update_server=False
[2025-10-09 17:12:29] 2025-10-09 15:11:38,384 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 17:12:29] 2025-10-09 15:11:38,384 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 17:12:29] 2025-10-09 15:11:38,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 17:12:29] 2025-10-09 15:11:38,385 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 17:12:29] 2025-10-09 15:11:38,385 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 17:12:29] 2025-10-09 15:11:38,385 | INFO     | will abort loop
[2025-10-09 17:12:29] 2025-10-09 15:11:38,463 | INFO     | all data control threads have been joined
[2025-10-09 17:12:29] 2025-10-09 15:11:39,128 | INFO     | all payload control threads have been joined
[2025-10-09 17:12:29] 2025-10-09 15:11:39,345 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 17:12:29] 2025-10-09 15:11:39,390 | INFO     | [job] retrieve thread has finished
[2025-10-09 17:12:29] 2025-10-09 15:11:39,390 | INFO     | [job] queue monitor thread has finished
[2025-10-09 17:12:29] 2025-10-09 15:11:39,390 | INFO     | [job] job monitor thread has finished
[2025-10-09 17:12:29] 2025-10-09 15:11:39,469 | INFO     | [data] control thread has finished
[2025-10-09 17:12:29] 2025-10-09 15:11:39,535 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 17:12:29] 2025-10-09 15:11:39,575 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 17:12:29] 2025-10-09 15:11:39,809 | INFO     | [payload] validate_post thread has finished
[2025-10-09 17:12:29] 2025-10-09 15:11:39,913 | INFO     | all job control threads have been joined
[2025-10-09 17:12:29] 2025-10-09 15:11:40,134 | INFO     | [payload] control thread has finished
[2025-10-09 17:12:29] 2025-10-09 15:11:40,325 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 17:12:29] 2025-10-09 15:11:40,541 | INFO     | [data] copytool_in thread has finished
[2025-10-09 17:12:29] 2025-10-09 15:11:40,690 | INFO     | [job] validate thread has finished
[2025-10-09 17:12:29] 2025-10-09 15:11:40,711 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 17:12:29] 2025-10-09 15:11:40,782 | INFO     | [payload] failed_post thread has finished
[2025-10-09 17:12:29] 2025-10-09 15:11:40,804 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 17:12:29] 2025-10-09 15:11:40,918 | INFO     | [job] control thread has finished
[2025-10-09 17:12:29] 2025-10-09 15:11:41,541 | INFO     | [data] copytool_out thread has finished
[2025-10-09 17:12:29] 2025-10-09 15:11:43,351 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 17:12:29] 2025-10-09 15:11:59,141 [wrapper] supervise_pilot (15 min periods counter: 18)
[2025-10-09 17:12:29] 2025-10-09 15:12:08,628 | INFO     | PID=249190 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 17:12:29] 2025-10-09 15:12:08,629 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 17:12:29] 2025-10-09 15:12:08,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 17:12:29] 2025-10-09 15:12:08,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 17:12:29] 2025-10-09 15:12:24,056 | INFO     | [monitor] cgroup control has ended
[2025-10-09 17:12:29] 2025-10-09 15:12:24,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139923211126592)>', '<ExcThread(monitor, started 139922560239360)>']
[2025-10-09 17:12:29] 2025-10-09 15:12:24,709 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 17:12:29] 2025-10-09 15:12:24,710 | INFO     | [monitor] control thread has ended
[2025-10-09 17:12:29] 2025-10-09 15:12:29,172 | INFO     | all workflow threads have been joined
[2025-10-09 17:12:29] 2025-10-09 15:12:29,172 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 17:12:29] 2025-10-09 15:12:29,173 | INFO     | traces error code: 0
[2025-10-09 17:12:29] 2025-10-09 15:12:29,173 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 17:12:29] 2025-10-09 15:12:29,245 [wrapper] ==== pilot stdout END ====
[2025-10-09 17:12:29] 2025-10-09 15:12:29,247 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 17:12:29] 2025-10-09 15:12:29,249 [wrapper] pilotpid: 249190
[2025-10-09 17:12:29] 2025-10-09 15:12:29,251 [wrapper] Pilot exit status: 0
[2025-10-09 17:12:29] 2025-10-09 15:12:29,257 [wrapper] pandaids: 6837324542
[2025-10-09 17:12:29] 2025-10-09 15:12:29,278 [wrapper] cleanup supervisor_pilot  284590 249191
[2025-10-09 17:12:29] 2025-10-09 15:12:29,280 [wrapper] Test setup, not cleaning
[2025-10-09 17:12:29] 2025-10-09 15:12:29,282 [wrapper] apfmon messages muted
[2025-10-09 17:12:29] 2025-10-09 15:12:29,284 [wrapper] ==== wrapper stdout END ====
[2025-10-09 17:12:29] 2025-10-09 15:12:29,285 [wrapper] ==== wrapper stderr END ====
[2025-10-09 17:12:29]  *** Error codes and diagnostics ***
[2025-10-09 17:12:29]     "exeErrorCode": 0,
[2025-10-09 17:12:29]     "exeErrorDiag": "",
[2025-10-09 17:12:29]     "pilotErrorCode": 0,
[2025-10-09 17:12:29]     "pilotErrorDiag": "",
[2025-10-09 17:12:29]  *** Listing of results directory ***
[2025-10-09 17:12:29] total 416412
[2025-10-09 17:12:29] -rw-r--r--. 1 boinc boinc    557409  9 oct.  12:27 pilot3.tar.gz
[2025-10-09 17:12:29] -rwx------. 1 boinc boinc     36292  9 oct.  12:41 runpilot2-wrapper.sh
[2025-10-09 17:12:29] -rw-r--r--. 1 boinc boinc      5112  9 oct.  12:43 queuedata.json
[2025-10-09 17:12:29] -rw-r--r--. 1 boinc boinc       100  9 oct.  12:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 17:12:29] -rwxr-xr-x. 1 boinc boinc      7986  9 oct.  12:56 run_atlas
[2025-10-09 17:12:29] -rw-r--r--. 1 boinc boinc       105  9 oct.  12:56 job.xml
[2025-10-09 17:12:29] -rw-r--r--. 2 boinc boinc 222690547  9 oct.  12:56 EVNT.46676267._000520.pool.root.1
[2025-10-09 17:12:29] -rw-r--r--. 2 boinc boinc    569682  9 oct.  12:56 input.tar.gz
[2025-10-09 17:12:29] -rw-r--r--. 2 boinc boinc     15120  9 oct.  12:56 start_atlas.sh
[2025-10-09 17:12:29] drwxrwx--x. 1 boinc boinc        76  9 oct.  12:56 shared
[2025-10-09 17:12:29] -rw-r--r--. 1 boinc boinc         0  9 oct.  12:56 boinc_setup_complete
[2025-10-09 17:12:29] -rw-r--r--. 1 boinc boinc      5927  9 oct.  12:56 init_data.xml
[2025-10-09 17:12:29] -rw-r--r--. 1 boinc boinc         0  9 oct.  12:56 boinc_lockfile
[2025-10-09 17:12:29] -rw-r--r--. 1 boinc boinc      2550  9 oct.  12:56 pandaJob.out
[2025-10-09 17:12:29] -rw-------. 1 boinc boinc    979306  9 oct.  12:56 agis_schedconf.cvmfs.json
[2025-10-09 17:12:29] drwx------. 1 boinc boinc       414  9 oct.  12:57 pilot3
[2025-10-09 17:12:29] -rw-------. 1 boinc boinc 194740960  9 oct.  17:10 HITS.46676269._012812.pool.root.1
[2025-10-09 17:12:29] -rw-------. 1 boinc boinc      1019  9 oct.  17:11 memory_monitor_summary.json
[2025-10-09 17:12:29] -rw-r--r--. 1 boinc boinc       530  9 oct.  17:11 boinc_task_state.xml
[2025-10-09 17:12:29] -rw-------. 1 boinc boinc   1560401  9 oct.  17:11 agis_ddmendpoints.agis.ALL.json
[2025-10-09 17:12:29] -rw-------. 1 boinc boinc    442613  9 oct.  17:11 log.46676269._012812.job.log.tgz.1
[2025-10-09 17:12:29] -rw-------. 1 boinc boinc      7759  9 oct.  17:11 heartbeat.json
[2025-10-09 17:12:29] -rw-------. 1 boinc boinc        95  9 oct.  17:12 pilot_heartbeat.json
[2025-10-09 17:12:29] -rw-r--r--. 1 boinc boinc        28  9 oct.  17:12 wrapper_checkpoint.txt
[2025-10-09 17:12:29] -rw-r--r--. 1 boinc boinc      8192  9 oct.  17:12 boinc_mmap_file
[2025-10-09 17:12:29] -rw-------. 1 boinc boinc      4934  9 oct.  17:12 pilotlog.txt
[2025-10-09 17:12:29] -rw-------. 1 boinc boinc   2103279  9 oct.  17:12 log.46676269._012812.job.log.1
[2025-10-09 17:12:29] -rw-------. 1 boinc boinc       357  9 oct.  17:12 output.list
[2025-10-09 17:12:29] -rw-r--r--. 1 boinc boinc       620  9 oct.  17:12 runtime_log
[2025-10-09 17:12:29] -rw-------. 1 boinc boinc   2560000  9 oct.  17:12 result.tar.gz
[2025-10-09 17:12:29] -rw-r--r--. 1 boinc boinc      8634  9 oct.  17:12 runtime_log.err
[2025-10-09 17:12:29] -rw-------. 1 boinc boinc       640  9 oct.  17:12 f3cNDmkG3Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQAZNDmN4HK0n.diag
[2025-10-09 17:12:29] -rw-r--r--. 1 boinc boinc     20933  9 oct.  17:12 stderr.txt
[2025-10-09 17:12:29] HITS file was successfully produced:
[2025-10-09 17:12:29] -rw-------. 1 boinc boinc 194740960  9 oct.  17:10 shared/HITS.pool.root.1
[2025-10-09 17:12:29]  *** Contents of shared directory: ***
[2025-10-09 17:12:29] total 410728
[2025-10-09 17:12:29] -rw-r--r--. 2 boinc boinc 222690547  9 oct.  12:56 ATLAS.root_0
[2025-10-09 17:12:29] -rw-r--r--. 2 boinc boinc    569682  9 oct.  12:56 input.tar.gz
[2025-10-09 17:12:29] -rw-r--r--. 2 boinc boinc     15120  9 oct.  12:56 start_atlas.sh
[2025-10-09 17:12:29] -rw-------. 1 boinc boinc 194740960  9 oct.  17:10 HITS.pool.root.1
[2025-10-09 17:12:29] -rw-------. 1 boinc boinc   2560000  9 oct.  17:12 result.tar.gz
17:12:31 (244863): run_atlas exited; CPU time 89885.948221
17:12:31 (244863): called boinc_finish(0)

</stderr_txt>
]]>

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