Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:12 (85080): wrapper (7.7.26015): starting
00:03:12 (85080): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 00:03:12] Arguments: --nthreads 9
[2025-10-10 00:03:12] Threads: 9
[2025-10-10 00:03:12] Checking for CVMFS
[2025-10-10 00:03:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 00:03:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 00:03:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 00:03:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 00:03:14] 2.13.2.0 490696 125877 249896 151533 2 446 32000905 32935937 26909 16776704 0 85337184 99.654 77939282 29802 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 00:03:14] CVMFS is ok
[2025-10-10 00:03:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 00:03:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 00:03:14] Further information can be found at the LHC@home message board.
[2025-10-10 00:03:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 00:03:14] Checking for apptainer binary...
[2025-10-10 00:03:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 00:03:14] Running /usr/bin/apptainer --version
[2025-10-10 00:03:15] apptainer version 1.4.3-1.el9
[2025-10-10 00:03:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 00:03:16] c-8-17.aglt2.org
[2025-10-10 00:03:16] apptainer works
[2025-10-10 00:03:16] Set ATHENA_PROC_NUMBER=9
[2025-10-10 00:03:16] Set ATHENA_CORE_NUMBER=9
[2025-10-10 00:03:16] Starting ATLAS job with PandaID=6837324640
[2025-10-10 00:03:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 00:02:56]  *** The last 200 lines of the pilot log: ***
[2025-10-11 00:02:56] 2025-10-10 19:03:43,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 00:02:56] 2025-10-10 19:03:43,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 00:02:56] 2025-10-10 19:03:43,154 | INFO     | fitting pss+swap vs Time
[2025-10-11 00:02:56] 2025-10-10 19:03:43,155 | INFO     | sum of square deviations: 212754322008.94452
[2025-10-11 00:02:56] 2025-10-10 19:03:43,178 | INFO     | sum of deviations: 567689750345.7943
[2025-10-11 00:02:56] 2025-10-10 19:03:43,178 | INFO     | mean x: 1760096094.9920635
[2025-10-11 00:02:56] 2025-10-10 19:03:43,178 | INFO     | mean y: 2504982.6848072563
[2025-10-11 00:02:56] 2025-10-10 19:03:43,178 | INFO     | -- intersect: -4693937859.536959
[2025-10-11 00:02:56] 2025-10-10 19:03:43,178 | INFO     | intersect: -4693937859.536959
[2025-10-11 00:02:56] 2025-10-10 19:03:43,180 | INFO     | chi2: 5.026934135574802
[2025-10-11 00:02:56] 2025-10-10 19:03:43,181 | INFO     | sum of square deviations: 209157094489.22717
[2025-10-11 00:02:56] 2025-10-10 19:03:43,202 | INFO     | sum of deviations: 619323013016.3295
[2025-10-11 00:02:56] 2025-10-10 19:03:43,202 | INFO     | mean x: 1760095942.5051312
[2025-10-11 00:02:56] 2025-10-10 19:03:43,202 | INFO     | mean y: 2507160.4823261118
[2025-10-11 00:02:56] 2025-10-10 19:03:43,202 | INFO     | -- intersect: -5209211452.133221
[2025-10-11 00:02:56] 2025-10-10 19:03:43,202 | INFO     | intersect: -5209211452.133221
[2025-10-11 00:02:56] 2025-10-10 19:03:43,204 | INFO     | chi2: 4.342008213240662
[2025-10-11 00:02:56] 2025-10-10 19:03:43,204 | INFO     | current chi2=4.342008213240662 (change=13.625122268601636 %)
[2025-10-11 00:02:56] 2025-10-10 19:03:43,204 | INFO     | right removable region: 876
[2025-10-11 00:02:56] 2025-10-10 19:03:43,205 | INFO     | sum of square deviations: 209155860947.22723
[2025-10-11 00:02:56] 2025-10-10 19:03:43,227 | INFO     | sum of deviations: 298983049790.676
[2025-10-11 00:02:56] 2025-10-10 19:03:43,227 | INFO     | mean x: 1760096247.5051312
[2025-10-11 00:02:56] 2025-10-10 19:03:43,228 | INFO     | mean y: 2516365.2941847206
[2025-10-11 00:02:56] 2025-10-10 19:03:43,228 | INFO     | -- intersect: -2513497011.6246943
[2025-10-11 00:02:56] 2025-10-10 19:03:43,228 | INFO     | intersect: -2513497011.6246943
[2025-10-11 00:02:56] 2025-10-10 19:03:43,229 | INFO     | chi2: 1.713876291218544
[2025-10-11 00:02:56] 2025-10-10 19:03:43,229 | INFO     | current chi2=1.713876291218544 (change=65.9061319485028 %)
[2025-10-11 00:02:56] 2025-10-10 19:03:43,231 | INFO     | sum of square deviations: 205598138090.6686
[2025-10-11 00:02:56] 2025-10-10 19:03:43,253 | INFO     | sum of deviations: 170236056895.461
[2025-10-11 00:02:56] 2025-10-10 19:03:43,253 | INFO     | mean x: 1760096400.0194955
[2025-10-11 00:02:56] 2025-10-10 19:03:43,254 | INFO     | mean y: 2521880.502293578
[2025-10-11 00:02:56] 2025-10-10 19:03:43,254 | INFO     | -- intersect: -1454844775.0414329
[2025-10-11 00:02:56] 2025-10-10 19:03:43,254 | INFO     | intersect: -1454844775.0414329
[2025-10-11 00:02:56] 2025-10-10 19:03:43,255 | INFO     | chi2: 0.959335632717182
[2025-10-11 00:02:56] 2025-10-10 19:03:43,255 | INFO     | current chi2=0.959335632717182 (change=44.025386334324814 %)
[2025-10-11 00:02:56] 2025-10-10 19:03:43,256 | INFO     | sum of square deviations: 202081133477.94037
[2025-10-11 00:02:56] 2025-10-10 19:03:43,278 | INFO     | sum of deviations: 114838346212.06253
[2025-10-11 00:02:56] 2025-10-10 19:03:43,278 | INFO     | mean x: 1760096552.5305653
[2025-10-11 00:02:56] 2025-10-10 19:03:43,278 | INFO     | mean y: 2524281.525951557
[2025-10-11 00:02:56] 2025-10-10 19:03:43,278 | INFO     | -- intersect: -997700597.3998555
[2025-10-11 00:02:56] 2025-10-10 19:03:43,279 | INFO     | intersect: -997700597.3998555
[2025-10-11 00:02:56] 2025-10-10 19:03:43,280 | INFO     | chi2: 0.8264490102040747
[2025-10-11 00:02:56] 2025-10-10 19:03:43,280 | INFO     | current chi2=0.8264490102040747 (change=13.851942738405832 %)
[2025-10-11 00:02:56] 2025-10-10 19:03:43,280 | INFO     | left removable region: 30
[2025-10-11 00:02:56] 2025-10-10 19:03:43,281 | INFO     | sum of square deviations: 187749931303.49893
[2025-10-11 00:02:56] 2025-10-10 19:03:43,302 | INFO     | sum of deviations: 96467223393.12303
[2025-10-11 00:02:56] 2025-10-10 19:03:43,302 | INFO     | mean x: 1760096827.0543735
[2025-10-11 00:02:56] 2025-10-10 19:03:43,303 | INFO     | mean y: 2529771.3451536642
[2025-10-11 00:02:56] 2025-10-10 19:03:43,303 | INFO     | -- intersect: -901820246.9486588
[2025-10-11 00:02:56] 2025-10-10 19:03:43,303 | INFO     | intersect: -901820246.9486588
[2025-10-11 00:02:56] 2025-10-10 19:03:43,304 | INFO     | chi2: 0.009849776697019464
[2025-10-11 00:02:56] 2025-10-10 19:03:43,304 | INFO     | -- intersect: -901820246.9486588
[2025-10-11 00:02:56] 2025-10-10 19:03:43,304 | INFO     | current memory leak: 0.51 B/s (using 846 data points, chi2=0.01)
[2025-10-11 00:02:56] 2025-10-10 19:03:43,305 | INFO     | could have reported an average CPU frequency of 2600 MHz (32 samples)
[2025-10-11 00:02:56] 2025-10-10 19:03:43,306 | INFO     | ..............................
[2025-10-11 00:02:56] 2025-10-10 19:03:43,306 | INFO     | . Timing measurements:
[2025-10-11 00:02:56] 2025-10-10 19:03:43,306 | INFO     | . get job = 1 s
[2025-10-11 00:02:56] 2025-10-10 19:03:43,306 | INFO     | . initial setup = 7 s
[2025-10-11 00:02:56] 2025-10-10 19:03:43,306 | INFO     | . payload setup = 42 s
[2025-10-11 00:02:56] 2025-10-10 19:03:43,306 | INFO     | . stage-in = 0 s
[2025-10-11 00:02:56] 2025-10-10 19:03:43,306 | INFO     | . payload execution = 53812 s
[2025-10-11 00:02:56] 2025-10-10 19:03:43,306 | INFO     | . stage-out = 3 s
[2025-10-11 00:02:56] 2025-10-10 19:03:43,307 | INFO     | . log creation = 0 s
[2025-10-11 00:02:56] 2025-10-10 19:03:43,307 | INFO     | ..............................
[2025-10-11 00:02:56] 2025-10-10 19:03:43,441 | INFO     | time since job start (53952s) is within the limit (172800.0s)
[2025-10-11 00:02:56] 2025-10-10 19:03:43,867 | INFO     | 
[2025-10-11 00:02:56] 2025-10-10 19:03:43,867 | INFO     | job summary report
[2025-10-11 00:02:56] 2025-10-10 19:03:43,868 | INFO     | --------------------------------------------------
[2025-10-11 00:02:56] 2025-10-10 19:03:43,868 | INFO     | PanDA job id: 6837324640
[2025-10-11 00:02:56] 2025-10-10 19:03:43,868 | INFO     | task id: 46676269
[2025-10-11 00:02:56] 2025-10-10 19:03:43,868 | INFO     | errors: (none)
[2025-10-11 00:02:56] 2025-10-10 19:03:43,868 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 00:02:56] 2025-10-10 19:03:43,868 | INFO     | pilot state: finished 
[2025-10-11 00:02:56] 2025-10-10 19:03:43,868 | INFO     | transexitcode: 0
[2025-10-11 00:02:56] 2025-10-10 19:03:43,868 | INFO     | exeerrorcode: 0
[2025-10-11 00:02:56] 2025-10-10 19:03:43,868 | INFO     | exeerrordiag: 
[2025-10-11 00:02:56] 2025-10-10 19:03:43,869 | INFO     | exitcode: 0
[2025-10-11 00:02:56] 2025-10-10 19:03:43,869 | INFO     | exitmsg: OK
[2025-10-11 00:02:56] 2025-10-10 19:03:43,869 | INFO     | cpuconsumptiontime: 52256 s
[2025-10-11 00:02:56] 2025-10-10 19:03:43,869 | INFO     | nevents: 400
[2025-10-11 00:02:56] 2025-10-10 19:03:43,869 | INFO     | neventsw: 0
[2025-10-11 00:02:56] 2025-10-10 19:03:43,869 | INFO     | pid: 117953
[2025-10-11 00:02:56] 2025-10-10 19:03:43,869 | INFO     | pgrp: 117953
[2025-10-11 00:02:56] 2025-10-10 19:03:43,869 | INFO     | corecount: 9
[2025-10-11 00:02:56] 2025-10-10 19:03:43,869 | INFO     | event service: False
[2025-10-11 00:02:56] 2025-10-10 19:03:43,869 | INFO     | sizes: {0: 2348028, 1: 2348713, 3: 2348713, 4: 2348940, 16: 2348940, 27: 2348968, 35: 2349386, 39: 2349414, 53859: 2396482, 53863: 2405480, 53864: 2405536, 53884: 
[2025-10-11 00:02:56] 2025-10-10 19:03:43,870 | INFO     | --------------------------------------------------
[2025-10-11 00:02:56] 2025-10-10 19:03:43,870 | INFO     | 
[2025-10-11 00:02:56] 2025-10-10 19:03:43,870 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 00:02:56] 2025-10-10 19:03:43,908 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,909 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,909 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,909 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,909 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,909 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,910 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,910 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,910 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,910 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,910 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,910 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,910 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,911 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 00:02:56] 2025-10-10 19:03:43,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,911 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 00:02:56] 2025-10-10 19:03:43,911 | INFO     | job 6837324640 has completed (purged errors)
[2025-10-11 00:02:56] 2025-10-10 19:03:43,911 | INFO     | overall cleanup function is called
[2025-10-11 00:02:56] 2025-10-10 19:03:44,928 | INFO     | --- collectZombieJob: --- 10, [117953]
[2025-10-11 00:02:56] 2025-10-10 19:03:44,929 | INFO     | zombie collector waiting for pid 117953
[2025-10-11 00:02:56] 2025-10-10 19:03:44,929 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 00:02:56] 2025-10-10 19:03:44,929 | INFO     | collected zombie processes
[2025-10-11 00:02:56] 2025-10-10 19:03:44,929 | INFO     | will attempt to kill all subprocesses of pid=117953
[2025-10-11 00:02:56] 2025-10-10 19:03:45,493 | INFO     | process IDs to be killed: [117953] (in reverse order)
[2025-10-11 00:02:56] 2025-10-10 19:03:45,725 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 00:02:56] 2025-10-10 19:03:45,740 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 00:02:56] 2025-10-10 19:03:45,841 | INFO     | did not find any defunct processes belonging to 117953
[2025-10-11 00:02:56] 2025-10-10 19:03:45,887 | INFO     | did not find any defunct processes belonging to 117953
[2025-10-11 00:02:56] 2025-10-10 19:03:45,888 | INFO     | ready for new job
[2025-10-11 00:02:56] 2025-10-10 19:03:45,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 00:02:56] 2025-10-10 19:03:45,892 | INFO     | ***************************************
[2025-10-11 00:02:56] 2025-10-10 19:03:45,892 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 00:02:56] 2025-10-10 19:03:45,892 | INFO     | ***************************************
[2025-10-11 00:02:56] 2025-10-10 19:03:45,892 | INFO     | 
[2025-10-11 00:02:56] 2025-10-10 19:03:45,913 | INFO     | architecture information:
[2025-10-11 00:02:56] 2025-10-10 19:03:45,914 | INFO     | executing command: cat /etc/os-release
[2025-10-11 00:02:56] 2025-10-10 19:03:45,946 | INFO     | cat /etc/os-release:
[2025-10-11 00:02:56] NAME="CentOS Linux"
[2025-10-11 00:02:56] VERSION="7 (Core)"
[2025-10-11 00:02:56] ID="centos"
[2025-10-11 00:02:56] ID_LIKE="rhel fedora"
[2025-10-11 00:02:56] VERSION_ID="7"
[2025-10-11 00:02:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 00:02:56] ANSI_COLOR="0;31"
[2025-10-11 00:02:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 00:02:56] HOME_URL="https://www.centos.org/"
[2025-10-11 00:02:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 00:02:56] 
[2025-10-11 00:02:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 00:02:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 00:02:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 00:02:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 00:02:56] 
[2025-10-11 00:02:56] 2025-10-10 19:03:45,947 | INFO     | ***************************************
[2025-10-11 00:02:56] 2025-10-10 19:03:46,450 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 00:02:56] 2025-10-10 19:03:46,544 | INFO     | sufficient remaining disk space (74543267840 B)
[2025-10-11 00:02:56] 2025-10-10 19:03:46,544 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 00:02:56] 2025-10-10 19:03:46,545 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 00:02:56] 2025-10-10 19:03:46,545 | INFO     | update_server=False
[2025-10-11 00:02:56] 2025-10-10 19:03:46,545 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 00:02:56] 2025-10-10 19:03:46,754 | INFO     | all payload control threads have been joined
[2025-10-11 00:02:56] 2025-10-10 19:03:46,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 00:02:56] 2025-10-10 19:03:46,994 | INFO     | all job control threads have been joined
[2025-10-11 00:02:56] 2025-10-10 19:03:47,177 | INFO     | all data control threads have been joined
[2025-10-11 00:02:56] 2025-10-10 19:03:47,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 00:02:56] 2025-10-10 19:03:47,304 | INFO     | aborting loop
[2025-10-11 00:02:56] 2025-10-10 19:03:47,550 | INFO     | [job] retrieve thread has finished
[2025-10-11 00:02:56] 2025-10-10 19:03:47,564 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 00:02:56] 2025-10-10 19:03:47,760 | INFO     | [payload] control thread has finished
[2025-10-11 00:02:56] 2025-10-10 19:03:47,805 | INFO     | [payload] failed_post thread has finished
[2025-10-11 00:02:56] 2025-10-10 19:03:47,839 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 00:02:56] 2025-10-10 19:03:47,884 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 00:02:56] 2025-10-10 19:03:47,956 | INFO     | [job] validate thread has finished
[2025-10-11 00:02:56] 2025-10-10 19:03:48,000 | INFO     | [job] control thread has finished
[2025-10-11 00:02:56] 2025-10-10 19:03:48,121 | INFO     | [payload] validate_post thread has finished
[2025-10-11 00:02:56] 2025-10-10 19:03:48,183 | INFO     | [data] control thread has finished
[2025-10-11 00:02:56] 2025-10-10 19:03:48,253 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 00:02:56] 2025-10-10 19:03:48,316 | INFO     | [job] job monitor thread has finished
[2025-10-11 00:02:56] 2025-10-10 19:03:48,448 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 00:02:56] 2025-10-10 19:03:48,619 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 00:02:56] 2025-10-10 19:03:48,920 | INFO     | [data] copytool_in thread has finished
[2025-10-11 00:02:56] 2025-10-10 19:03:49,454 | INFO     | [job] queue monitor thread has finished
[2025-10-11 00:02:56] 2025-10-10 19:03:49,846 | INFO     | [data] copytool_out thread has finished
[2025-10-11 00:02:56] 2025-10-10 19:03:50,944 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 00:02:56] 2025-10-10 19:04:17,487 | INFO     | PID=96119 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 00:02:56] 2025-10-10 19:04:17,488 | INFO     | .. there are 39 such processes running
[2025-10-11 00:02:56] 2025-10-10 19:04:17,488 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 00:02:56] 2025-10-10 19:04:17,488 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 00:02:56] 2025-10-10 19:04:17,488 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 00:02:56] 2025-10-10 19:04:25,347 | INFO     | [monitor] cgroup control has ended
[2025-10-11 00:02:56] 2025-10-10 19:04:26,195 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140648236283712)>', '<ExcThread(monitor, started 140647747016448)>']
[2025-10-11 00:02:56] 2025-10-10 19:04:26,552 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 00:02:56] 2025-10-10 19:04:26,552 | INFO     | [monitor] control thread has ended
[2025-10-11 00:02:56] 2025-10-10 19:04:31,221 | INFO     | all workflow threads have been joined
[2025-10-11 00:02:56] 2025-10-10 19:04:31,222 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 00:02:56] 2025-10-10 19:04:31,222 | INFO     | traces error code: 0
[2025-10-11 00:02:56] 2025-10-10 19:04:31,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 00:02:56] 2025-10-10 19:04:31,540 [wrapper] ==== pilot stdout END ====
[2025-10-11 00:02:56] 2025-10-10 19:04:31,543 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 00:02:56] 2025-10-10 19:04:31,546 [wrapper] pilotpid: 96119
[2025-10-11 00:02:56] 2025-10-10 19:04:31,550 [wrapper] Pilot exit status: 0
[2025-10-11 00:02:56] 2025-10-10 19:04:31,582 [wrapper] pandaids: 6837324640
[2025-10-11 00:02:56] 2025-10-10 19:04:31,662 [wrapper] cleanup supervisor_pilot 2620637 96120
[2025-10-11 00:02:56] 2025-10-10 19:04:31,668 [wrapper] Test setup, not cleaning
[2025-10-11 00:02:56] 2025-10-10 19:04:31,672 [wrapper] apfmon messages muted
[2025-10-11 00:02:56] 2025-10-10 19:04:31,675 [wrapper] ==== wrapper stdout END ====
[2025-10-11 00:02:56] 2025-10-10 19:04:31,677 [wrapper] ==== wrapper stderr END ====
[2025-10-11 00:02:56]  *** Error codes and diagnostics ***
[2025-10-11 00:02:56]     "exeErrorCode": 0,
[2025-10-11 00:02:56]     "exeErrorDiag": "",
[2025-10-11 00:02:56]     "pilotErrorCode": 0,
[2025-10-11 00:02:56]     "pilotErrorDiag": "",
[2025-10-11 00:02:56]  *** Listing of results directory ***
[2025-10-11 00:02:56] total 425480
[2025-10-11 00:02:56] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 06:27 pilot3.tar.gz
[2025-10-11 00:02:56] -rwx------. 1 boincer umatlas     36292 Oct  9 06:41 runpilot2-wrapper.sh
[2025-10-11 00:02:56] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 06:43 queuedata.json
[2025-10-11 00:02:56] -rw-r--r--. 1 boincer umatlas       100 Oct 10 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 00:02:56] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 00:03 run_atlas
[2025-10-11 00:02:56] -rw-r--r--. 1 boincer umatlas       105 Oct 10 00:03 job.xml
[2025-10-11 00:02:56] -rw-r--r--. 2 boincer umatlas 223382336 Oct 10 00:03 EVNT.46676267._000524.pool.root.1
[2025-10-11 00:02:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:03 start_atlas.sh
[2025-10-11 00:02:56] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 00:03 shared
[2025-10-11 00:02:56] -rw-r--r--. 2 boincer umatlas    569683 Oct 10 00:03 input.tar.gz
[2025-10-11 00:02:56] -rw-r--r--. 1 boincer umatlas         0 Oct 10 00:03 boinc_lockfile
[2025-10-11 00:02:56] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 00:03 pandaJob.out
[2025-10-11 00:02:56] -rw-------. 1 boincer umatlas    975454 Oct 10 00:04 agis_schedconf.cvmfs.json
[2025-10-11 00:02:56] drwx------. 5 boincer umatlas      4096 Oct 10 00:04 pilot3
[2025-10-11 00:02:56] -rw-------. 1 boincer umatlas 195623555 Oct 10 15:02 HITS.46676269._012910.pool.root.1
[2025-10-11 00:02:56] -rw-r--r--. 1 boincer umatlas       531 Oct 10 15:02 boinc_task_state.xml
[2025-10-11 00:02:56] -rw-------. 1 boincer umatlas      1049 Oct 10 15:03 memory_monitor_summary.json
[2025-10-11 00:02:56] -rw-------. 1 boincer umatlas   1560580 Oct 10 15:03 agis_ddmendpoints.agis.ALL.json
[2025-10-11 00:02:56] -rw-------. 1 boincer umatlas        95 Oct 10 15:03 pilot_heartbeat.json
[2025-10-11 00:02:56] -rw-------. 1 boincer umatlas    888989 Oct 10 15:03 log.46676269._012910.job.log.tgz.1
[2025-10-11 00:02:56] -rw-------. 1 boincer umatlas      7836 Oct 10 15:03 heartbeat.json
[2025-10-11 00:02:56] -rw-------. 1 boincer umatlas      4822 Oct 10 15:04 pilotlog.txt
[2025-10-11 00:02:56] -rw-------. 1 boincer umatlas   5503402 Oct 10 15:04 log.46676269._012910.job.log.1
[2025-10-11 00:02:56] -rw-------. 1 boincer umatlas       357 Oct 10 15:04 output.list
[2025-10-11 00:02:56] -rw-r--r--. 1 boincer umatlas       620 Oct 10 15:04 runtime_log
[2025-10-11 00:02:56] -rw-------. 1 boincer umatlas   6410240 Oct 10 15:04 result.tar.gz
[2025-10-11 00:02:56] -rw-------. 1 boincer umatlas       659 Oct 10 15:04 yBiLDmoG3Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVRNMDmIh5Zdn.diag
[2025-10-11 00:02:56] -rw-r--r--. 1 boincer umatlas      8694 Oct 10 15:04 runtime_log.err
[2025-10-11 00:02:56] -rw-r--r--. 1 boincer umatlas      6662 Oct 11 00:02 init_data.xml
[2025-10-11 00:02:56] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 00:02 boinc_mmap_file
[2025-10-11 00:02:56] -rw-r--r--. 1 boincer umatlas        28 Oct 11 00:02 wrapper_checkpoint.txt
[2025-10-11 00:02:56] -rw-r--r--. 1 boincer umatlas     21033 Oct 11 00:02 stderr.txt
[2025-10-11 00:02:56] HITS file was successfully produced:
[2025-10-11 00:02:56] -rw-------. 1 boincer umatlas 195623555 Oct 10 15:02 shared/HITS.pool.root.1
[2025-10-11 00:02:56]  *** Contents of shared directory: ***
[2025-10-11 00:02:56] total 416028
[2025-10-11 00:02:56] -rw-r--r--. 2 boincer umatlas 223382336 Oct 10 00:03 ATLAS.root_0
[2025-10-11 00:02:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:03 start_atlas.sh
[2025-10-11 00:02:56] -rw-r--r--. 2 boincer umatlas    569683 Oct 10 00:03 input.tar.gz
[2025-10-11 00:02:56] -rw-------. 1 boincer umatlas 195623555 Oct 10 15:02 HITS.pool.root.1
[2025-10-11 00:02:56] -rw-------. 1 boincer umatlas   6410240 Oct 10 15:04 result.tar.gz
00:02:58 (85080): run_atlas exited; CPU time 53995.936649
00:02:58 (85080): called boinc_finish(0)

</stderr_txt>
]]>

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