Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:51:19 (3655475): wrapper (7.7.26015): starting
06:51:19 (3655475): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 06:51:19] Arguments: --nthreads 8
[2025-10-09 06:51:19] Threads: 8
[2025-10-09 06:51:19] Checking for CVMFS
[2025-10-09 06:51:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 06:51:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 06:51:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 06:51:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 06:51:20] 2.13.2.0 3269412 31310 345232 151509 1 615 37653936 40960001 26089 16776704 0 375325282 99.824 171274702 37122 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 06:51:20] CVMFS is ok
[2025-10-09 06:51:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 06:51:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 06:51:20] Further information can be found at the LHC@home message board.
[2025-10-09 06:51:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 06:51:20] Checking for apptainer binary...
[2025-10-09 06:51:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 06:51:20] Running /usr/bin/apptainer --version
[2025-10-09 06:51:20] apptainer version 1.4.3-1.el9
[2025-10-09 06:51:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 06:51:20] c8-16-2.aglt2.org
[2025-10-09 06:51:20] apptainer works
[2025-10-09 06:51:20] Set ATHENA_PROC_NUMBER=8
[2025-10-09 06:51:20] Set ATHENA_CORE_NUMBER=8
[2025-10-09 06:51:20] Starting ATLAS job with PandaID=6837322468
[2025-10-09 06:51:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 08:03:51]  *** The last 200 lines of the pilot log: ***
[2025-10-09 08:03:51] 2025-10-09 12:03:08,786 | WARNING  | maxPSS not found in memory monitor output
[2025-10-09 08:03:51] 2025-10-09 12:03:08,787 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2938368 B
[2025-10-09 08:03:51] 2025-10-09 12:03:08,787 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15781 B
[2025-10-09 08:03:51] 2025-10-09 12:03:08,787 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-09 08:03:51] 2025-10-09 12:03:08,804 | INFO     | sufficient remaining disk space (164451319808 B)
[2025-10-09 08:03:51] 2025-10-09 12:03:08,804 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-09 08:03:51] 2025-10-09 12:03:08,805 | INFO     | size of work directory /tmp/boinchome/slots/6/PanDA_Pilot-6837322468: 3235666 B (within 2537553920 B limit)
[2025-10-09 08:03:51] 2025-10-09 12:03:08,805 | INFO     | pfn file=/tmp/boinchome/slots/6/PanDA_Pilot-6837322468/HITS.46676269._012004.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-09 08:03:51] 2025-10-09 12:03:08,805 | INFO     | total size of present files: 0 B (workdir size: 3235666 B)
[2025-10-09 08:03:51] 2025-10-09 12:03:08,805 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/6/PanDA_Pilot-6837322468/HITS.46676269._012004.pool.root.1 since it does not exist
[2025-10-09 08:03:51] 2025-10-09 12:03:09,402 | INFO     | number of running child processes to parent process 3705949: 1
[2025-10-09 08:03:51] 2025-10-09 12:03:09,402 | INFO     | maximum number of monitored processes: 6
[2025-10-09 08:03:51] 2025-10-09 12:03:10,156 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 08:03:51] 2025-10-09 12:03:10,458 | INFO     | time since job start (4300s) is within the limit (172800.0s)
[2025-10-09 08:03:51] 2025-10-09 12:03:11,907 | INFO     | monitor loop #278: job 0:6837322468 is in state 'finished'
[2025-10-09 08:03:51] 2025-10-09 12:03:11,907 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 08:03:51] 2025-10-09 12:03:12,463 | INFO     | time since job start (4302s) is within the limit (172800.0s)
[2025-10-09 08:03:51] 2025-10-09 12:03:12,788 | INFO     | job 6837322468 has state=finished
[2025-10-09 08:03:51] 2025-10-09 12:03:12,788 | INFO     | preparing for final server update for job 6837322468 in state='finished'
[2025-10-09 08:03:51] 2025-10-09 12:03:12,836 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-09 08:03:51] 2025-10-09 12:03:12,837 | INFO     | this job has now completed (state=finished)
[2025-10-09 08:03:51] 2025-10-09 12:03:12,837 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 08:03:51] 2025-10-09 12:03:12,837 | INFO     | log transfer has been attempted: DONE
[2025-10-09 08:03:51] 2025-10-09 12:03:12,837 | INFO     | job 6837322468 has finished - writing final server update
[2025-10-09 08:03:51] 2025-10-09 12:03:12,837 | INFO     | total number of processed events: 400 (read)
[2025-10-09 08:03:51] 2025-10-09 12:03:12,837 | INFO     | executing command: lscpu
[2025-10-09 08:03:51] 2025-10-09 12:03:12,904 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 08:03:51] 2025-10-09 12:03:14,411 | INFO     | monitor loop #279: job 0:6837322468 is in state 'finished'
[2025-10-09 08:03:51] 2025-10-09 12:03:14,411 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 08:03:51] 2025-10-09 12:03:14,469 | INFO     | time since job start (4304s) is within the limit (172800.0s)
[2025-10-09 08:03:51] 2025-10-09 12:03:16,474 | INFO     | time since job start (4306s) is within the limit (172800.0s)
[2025-10-09 08:03:51] 2025-10-09 12:03:16,914 | INFO     | monitor loop #280: job 0:6837322468 is in state 'finished'
[2025-10-09 08:03:51] 2025-10-09 12:03:16,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 08:03:51] 2025-10-09 12:03:17,294 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-09 08:03:51] 2025-10-09 12:03:17,299 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3765.613492187499
[2025-10-09 08:03:51] 2025-10-09 12:03:17,312 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6837322468/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 08:03:51] 2025-10-09 12:03:17,312 | INFO     | extracted standard info from prmon json
[2025-10-09 08:03:51] 2025-10-09 12:03:17,312 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 08:03:51] 2025-10-09 12:03:17,312 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 08:03:51] 2025-10-09 12:03:17,313 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 08:03:51] 2025-10-09 12:03:17,313 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 08:03:51] 2025-10-09 12:03:17,314 | INFO     | fitting pss+swap vs Time
[2025-10-09 08:03:51] 2025-10-09 12:03:17,314 | INFO     | sum of square deviations: 81266640.0
[2025-10-09 08:03:51] 2025-10-09 12:03:17,314 | INFO     | sum of deviations: 268518889.0
[2025-10-09 08:03:51] 2025-10-09 12:03:17,314 | INFO     | mean x: 1760009339.5
[2025-10-09 08:03:51] 2025-10-09 12:03:17,314 | INFO     | mean y: 2181813.6875
[2025-10-09 08:03:51] 2025-10-09 12:03:17,314 | INFO     | -- intersect: -5813190305.4522085
[2025-10-09 08:03:51] 2025-10-09 12:03:17,314 | INFO     | intersect: -5813190305.4522085
[2025-10-09 08:03:51] 2025-10-09 12:03:17,314 | INFO     | chi2: 0.01591146378694055
[2025-10-09 08:03:51] 2025-10-09 12:03:17,314 | INFO     | -- intersect: -5813190305.4522085
[2025-10-09 08:03:51] 2025-10-09 12:03:17,314 | INFO     | current memory leak: 3.30 B/s (using 64 data points, chi2=0.02)
[2025-10-09 08:03:51] 2025-10-09 12:03:17,314 | INFO     | could have reported an average CPU frequency of 3658 MHz (6 samples)
[2025-10-09 08:03:51] 2025-10-09 12:03:17,315 | INFO     | ..............................
[2025-10-09 08:03:51] 2025-10-09 12:03:17,315 | INFO     | . Timing measurements:
[2025-10-09 08:03:51] 2025-10-09 12:03:17,315 | INFO     | . get job = 0 s
[2025-10-09 08:03:51] 2025-10-09 12:03:17,315 | INFO     | . initial setup = 3 s
[2025-10-09 08:03:51] 2025-10-09 12:03:17,315 | INFO     | . payload setup = 4 s
[2025-10-09 08:03:51] 2025-10-09 12:03:17,315 | INFO     | . stage-in = 0 s
[2025-10-09 08:03:51] 2025-10-09 12:03:17,315 | INFO     | . payload execution = 4274 s
[2025-10-09 08:03:51] 2025-10-09 12:03:17,315 | INFO     | . stage-out = 0 s
[2025-10-09 08:03:51] 2025-10-09 12:03:17,315 | INFO     | . log creation = 0 s
[2025-10-09 08:03:51] 2025-10-09 12:03:17,315 | INFO     | ..............................
[2025-10-09 08:03:51] 2025-10-09 12:03:17,366 | INFO     | 
[2025-10-09 08:03:51] 2025-10-09 12:03:17,366 | INFO     | job summary report
[2025-10-09 08:03:51] 2025-10-09 12:03:17,366 | INFO     | --------------------------------------------------
[2025-10-09 08:03:51] 2025-10-09 12:03:17,366 | INFO     | PanDA job id: 6837322468
[2025-10-09 08:03:51] 2025-10-09 12:03:17,366 | INFO     | task id: 46676269
[2025-10-09 08:03:51] 2025-10-09 12:03:17,366 | INFO     | errors: (none)
[2025-10-09 08:03:51] 2025-10-09 12:03:17,366 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 08:03:51] 2025-10-09 12:03:17,366 | INFO     | pilot state: finished 
[2025-10-09 08:03:51] 2025-10-09 12:03:17,366 | INFO     | transexitcode: 0
[2025-10-09 08:03:51] 2025-10-09 12:03:17,366 | INFO     | exeerrorcode: 0
[2025-10-09 08:03:51] 2025-10-09 12:03:17,366 | INFO     | exeerrordiag: 
[2025-10-09 08:03:51] 2025-10-09 12:03:17,367 | INFO     | exitcode: 0
[2025-10-09 08:03:51] 2025-10-09 12:03:17,367 | INFO     | exitmsg: OK
[2025-10-09 08:03:51] 2025-10-09 12:03:17,367 | INFO     | cpuconsumptiontime: 23074 s
[2025-10-09 08:03:51] 2025-10-09 12:03:17,367 | INFO     | nevents: 400
[2025-10-09 08:03:51] 2025-10-09 12:03:17,367 | INFO     | neventsw: 0
[2025-10-09 08:03:51] 2025-10-09 12:03:17,367 | INFO     | pid: 3705949
[2025-10-09 08:03:51] 2025-10-09 12:03:17,367 | INFO     | pgrp: 3705949
[2025-10-09 08:03:51] 2025-10-09 12:03:17,367 | INFO     | corecount: 8
[2025-10-09 08:03:51] 2025-10-09 12:03:17,367 | INFO     | event service: False
[2025-10-09 08:03:51] 2025-10-09 12:03:17,367 | INFO     | sizes: {0: 2348856, 3: 2349118, 10: 2349146, 4282: 2375367, 4283: 2384365, 4285: 2384449, 4292: 2384771}
[2025-10-09 08:03:51] 2025-10-09 12:03:17,368 | INFO     | --------------------------------------------------
[2025-10-09 08:03:51] 2025-10-09 12:03:17,368 | INFO     | 
[2025-10-09 08:03:51] 2025-10-09 12:03:17,368 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-09 08:03:51] 2025-10-09 12:03:17,385 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,385 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | job 6837322468 has completed (purged errors)
[2025-10-09 08:03:51] 2025-10-09 12:03:17,386 | INFO     | overall cleanup function is called
[2025-10-09 08:03:51] 2025-10-09 12:03:18,243 | INFO     | PID=3674425 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-09 08:03:51] 2025-10-09 12:03:18,243 | INFO     | .. there are 51 such processes running
[2025-10-09 08:03:51] 2025-10-09 12:03:18,395 | INFO     | --- collectZombieJob: --- 10, [3705949]
[2025-10-09 08:03:51] 2025-10-09 12:03:18,395 | INFO     | zombie collector waiting for pid 3705949
[2025-10-09 08:03:51] 2025-10-09 12:03:18,395 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 08:03:51] 2025-10-09 12:03:18,395 | INFO     | collected zombie processes
[2025-10-09 08:03:51] 2025-10-09 12:03:18,395 | INFO     | will attempt to kill all subprocesses of pid=3705949
[2025-10-09 08:03:51] 2025-10-09 12:03:18,960 | INFO     | process IDs to be killed: [3705949] (in reverse order)
[2025-10-09 08:03:51] 2025-10-09 12:03:19,189 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 08:03:51] 2025-10-09 12:03:19,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 08:03:51] 2025-10-09 12:03:19,221 | INFO     | did not find any defunct processes belonging to 3705949
[2025-10-09 08:03:51] 2025-10-09 12:03:19,250 | INFO     | did not find any defunct processes belonging to 3705949
[2025-10-09 08:03:51] 2025-10-09 12:03:19,251 | INFO     | ready for new job
[2025-10-09 08:03:51] 2025-10-09 12:03:19,251 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 08:03:51] 2025-10-09 12:03:19,252 | INFO     | ***************************************
[2025-10-09 08:03:51] 2025-10-09 12:03:19,252 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 08:03:51] 2025-10-09 12:03:19,252 | INFO     | ***************************************
[2025-10-09 08:03:51] 2025-10-09 12:03:19,253 | INFO     | 
[2025-10-09 08:03:51] 2025-10-09 12:03:19,270 | INFO     | architecture information:
[2025-10-09 08:03:51] 2025-10-09 12:03:19,271 | INFO     | executing command: cat /etc/os-release
[2025-10-09 08:03:51] 2025-10-09 12:03:19,284 | INFO     | cat /etc/os-release:
[2025-10-09 08:03:51] NAME="CentOS Linux"
[2025-10-09 08:03:51] VERSION="7 (Core)"
[2025-10-09 08:03:51] ID="centos"
[2025-10-09 08:03:51] ID_LIKE="rhel fedora"
[2025-10-09 08:03:51] VERSION_ID="7"
[2025-10-09 08:03:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 08:03:51] ANSI_COLOR="0;31"
[2025-10-09 08:03:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 08:03:51] HOME_URL="https://www.centos.org/"
[2025-10-09 08:03:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 08:03:51] 
[2025-10-09 08:03:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 08:03:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 08:03:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 08:03:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 08:03:51] 
[2025-10-09 08:03:51] 2025-10-09 12:03:19,284 | INFO     | ***************************************
[2025-10-09 08:03:51] 2025-10-09 12:03:19,787 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-09 08:03:51] 2025-10-09 12:03:19,808 | INFO     | sufficient remaining disk space (164675715072 B)
[2025-10-09 08:03:51] 2025-10-09 12:03:19,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 08:03:51] 2025-10-09 12:03:19,809 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 08:03:51] 2025-10-09 12:03:19,809 | INFO     | update_server=False
[2025-10-09 08:03:51] 2025-10-09 12:03:19,809 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 08:03:51] 2025-10-09 12:03:19,809 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 08:03:51] 2025-10-09 12:03:20,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 08:03:51] 2025-10-09 12:03:20,423 | INFO     | aborting loop
[2025-10-09 08:03:51] 2025-10-09 12:03:20,730 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 08:03:51] 2025-10-09 12:03:20,809 | INFO     | [job] retrieve thread has finished
[2025-10-09 08:03:51] 2025-10-09 12:03:20,834 | INFO     | all data control threads have been joined
[2025-10-09 08:03:51] 2025-10-09 12:03:20,974 | INFO     | all payload control threads have been joined
[2025-10-09 08:03:51] 2025-10-09 12:03:21,099 | INFO     | all job control threads have been joined
[2025-10-09 08:03:51] 2025-10-09 12:03:21,260 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 08:03:51] 2025-10-09 12:03:21,393 | INFO     | [job] validate thread has finished
[2025-10-09 08:03:51] 2025-10-09 12:03:21,395 | INFO     | [payload] failed_post thread has finished
[2025-10-09 08:03:51] 2025-10-09 12:03:21,428 | INFO     | [job] job monitor thread has finished
[2025-10-09 08:03:51] 2025-10-09 12:03:21,695 | INFO     | [data] copytool_in thread has finished
[2025-10-09 08:03:51] 2025-10-09 12:03:21,718 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 08:03:51] 2025-10-09 12:03:21,815 | INFO     | [data] copytool_out thread has finished
[2025-10-09 08:03:51] 2025-10-09 12:03:21,839 | INFO     | [data] control thread has finished
[2025-10-09 08:03:51] 2025-10-09 12:03:21,980 | INFO     | [payload] control thread has finished
[2025-10-09 08:03:51] 2025-10-09 12:03:22,105 | INFO     | [job] control thread has finished
[2025-10-09 08:03:51] 2025-10-09 12:03:22,164 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 08:03:51] 2025-10-09 12:03:22,260 | INFO     | [payload] validate_post thread has finished
[2025-10-09 08:03:51] 2025-10-09 12:03:22,379 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 08:03:51] 2025-10-09 12:03:23,384 | INFO     | [job] queue monitor thread has finished
[2025-10-09 08:03:51] 2025-10-09 12:03:24,735 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 08:03:51] 2025-10-09 12:03:30,049 | INFO     | job.realtimelogging is not enabled
[2025-10-09 08:03:51] 2025-10-09 12:03:31,054 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 08:03:51] 2025-10-09 12:03:37,251 | INFO     | [monitor] cgroup control has ended
[2025-10-09 08:03:51] 2025-10-09 12:03:37,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139870142097216)>', '<ExcThread(monitor, started 139869300979456)>']
[2025-10-09 08:03:51] 2025-10-09 12:03:42,397 | INFO     | all workflow threads have been joined
[2025-10-09 08:03:51] 2025-10-09 12:03:42,397 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 08:03:51] 2025-10-09 12:03:42,397 | INFO     | traces error code: 0
[2025-10-09 08:03:51] 2025-10-09 12:03:42,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 08:03:51] 2025-10-09 12:03:51,011 | INFO     | PID=3674425 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 08:03:51] 2025-10-09 12:03:51,011 | INFO     | .. there are 52 such processes running
[2025-10-09 08:03:51] 2025-10-09 12:03:51,013 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 08:03:51] 2025-10-09 12:03:51,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 08:03:51] 2025-10-09 12:03:51,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 08:03:51] 2025-10-09 12:03:51,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 08:03:51] 2025-10-09 12:03:51,013 | INFO     | [monitor] control thread has ended
[2025-10-09 08:03:51] 2025-10-09 12:03:51,125 [wrapper] ==== pilot stdout END ====
[2025-10-09 08:03:51] 2025-10-09 12:03:51,127 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 08:03:51] 2025-10-09 12:03:51,129 [wrapper] pilotpid: 3674425
[2025-10-09 08:03:51] 2025-10-09 12:03:51,131 [wrapper] Pilot exit status: 0
[2025-10-09 08:03:51] 2025-10-09 12:03:51,139 [wrapper] pandaids: 6837322468
[2025-10-09 08:03:51] 2025-10-09 12:03:51,286 [wrapper] cleanup supervisor_pilot  197765 3674426
[2025-10-09 08:03:51] 2025-10-09 12:03:51,288 [wrapper] Test setup, not cleaning
[2025-10-09 08:03:51] 2025-10-09 12:03:51,290 [wrapper] apfmon messages muted
[2025-10-09 08:03:51] 2025-10-09 12:03:51,294 [wrapper] ==== wrapper stdout END ====
[2025-10-09 08:03:51] 2025-10-09 12:03:51,297 [wrapper] ==== wrapper stderr END ====
[2025-10-09 08:03:51]  *** Error codes and diagnostics ***
[2025-10-09 08:03:51]     "exeErrorCode": 0,
[2025-10-09 08:03:51]     "exeErrorDiag": "",
[2025-10-09 08:03:51]     "pilotErrorCode": 0,
[2025-10-09 08:03:51]     "pilotErrorDiag": "",
[2025-10-09 08:03:51]  *** Listing of results directory ***
[2025-10-09 08:03:51] total 417424
[2025-10-09 08:03:51] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 06:27 pilot3.tar.gz
[2025-10-09 08:03:51] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 06:40 queuedata.json
[2025-10-09 08:03:51] -rwx------. 1 boincer umatlas     36292 Oct  9 06:40 runpilot2-wrapper.sh
[2025-10-09 08:03:51] -rw-r--r--. 1 boincer umatlas       100 Oct  9 06:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 08:03:51] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 06:51 run_atlas
[2025-10-09 08:03:51] -rw-r--r--. 1 boincer umatlas       105 Oct  9 06:51 job.xml
[2025-10-09 08:03:51] -rw-r--r--. 2 boincer umatlas 222660306 Oct  9 06:51 EVNT.46676267._000483.pool.root.1
[2025-10-09 08:03:51] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 06:51 start_atlas.sh
[2025-10-09 08:03:51] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 06:51 shared
[2025-10-09 08:03:51] -rw-r--r--. 2 boincer umatlas    569683 Oct  9 06:51 input.tar.gz
[2025-10-09 08:03:51] -rw-r--r--. 1 boincer umatlas         0 Oct  9 06:51 boinc_lockfile
[2025-10-09 08:03:51] -rw-r--r--. 1 boincer umatlas      2550 Oct  9 06:51 pandaJob.out
[2025-10-09 08:03:51] -rw-------. 1 boincer umatlas    979306 Oct  9 06:51 agis_schedconf.cvmfs.json
[2025-10-09 08:03:51] -rw-------. 1 boincer umatlas   1560401 Oct  9 06:51 agis_ddmendpoints.agis.ALL.json
[2025-10-09 08:03:51] drwx------. 5 boincer umatlas      4096 Oct  9 06:51 pilot3
[2025-10-09 08:03:51] -rw-r--r--. 1 boincer umatlas      7161 Oct  9 07:57 init_data.xml
[2025-10-09 08:03:51] -rw-------. 1 boincer umatlas 199056708 Oct  9 08:02 HITS.46676269._012004.pool.root.1
[2025-10-09 08:03:51] -rw-r--r--. 1 boincer umatlas       529 Oct  9 08:02 boinc_task_state.xml
[2025-10-09 08:03:51] -rw-------. 1 boincer umatlas      1034 Oct  9 08:03 memory_monitor_summary.json
[2025-10-09 08:03:51] -rw-------. 1 boincer umatlas    307808 Oct  9 08:03 log.46676269._012004.job.log.tgz.1
[2025-10-09 08:03:51] -rw-------. 1 boincer umatlas      7774 Oct  9 08:03 heartbeat.json
[2025-10-09 08:03:51] -rw-r--r--. 1 boincer umatlas        27 Oct  9 08:03 wrapper_checkpoint.txt
[2025-10-09 08:03:51] -rw-------. 1 boincer umatlas        95 Oct  9 08:03 pilot_heartbeat.json
[2025-10-09 08:03:51] -rw-------. 1 boincer umatlas       823 Oct  9 08:03 pilotlog.txt
[2025-10-09 08:03:51] -rw-------. 1 boincer umatlas    602571 Oct  9 08:03 log.46676269._012004.job.log.1
[2025-10-09 08:03:51] -rw-------. 1 boincer umatlas       357 Oct  9 08:03 output.list
[2025-10-09 08:03:51] -rw-r--r--. 1 boincer umatlas       620 Oct  9 08:03 runtime_log
[2025-10-09 08:03:51] -rw-------. 1 boincer umatlas    931840 Oct  9 08:03 result.tar.gz
[2025-10-09 08:03:51] -rw-r--r--. 1 boincer umatlas      8698 Oct  9 08:03 runtime_log.err
[2025-10-09 08:03:51] -rw-------. 1 boincer umatlas       651 Oct  9 08:03 2BHODmeF3Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmP3YNDmiKgdVn.diag
[2025-10-09 08:03:51] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 08:03 boinc_mmap_file
[2025-10-09 08:03:51] -rw-r--r--. 1 boincer umatlas     22380 Oct  9 08:03 stderr.txt
[2025-10-09 08:03:51] HITS file was successfully produced:
[2025-10-09 08:03:51] -rw-------. 1 boincer umatlas 199056708 Oct  9 08:02 shared/HITS.pool.root.1
[2025-10-09 08:03:51]  *** Contents of shared directory: ***
[2025-10-09 08:03:51] total 413328
[2025-10-09 08:03:51] -rw-r--r--. 2 boincer umatlas 222660306 Oct  9 06:51 ATLAS.root_0
[2025-10-09 08:03:51] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 06:51 start_atlas.sh
[2025-10-09 08:03:51] -rw-r--r--. 2 boincer umatlas    569683 Oct  9 06:51 input.tar.gz
[2025-10-09 08:03:51] -rw-------. 1 boincer umatlas 199056708 Oct  9 08:02 HITS.pool.root.1
[2025-10-09 08:03:51] -rw-------. 1 boincer umatlas    931840 Oct  9 08:03 result.tar.gz
08:03:53 (3655475): run_atlas exited; CPU time 23260.049411
08:03:53 (3655475): called boinc_finish(0)

</stderr_txt>
]]>

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