Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:21:22 (10710): wrapper (7.7.26015): starting
07:21:22 (10710): wrapper: running run_atlas (--nthreads 9)
[2025-10-09 07:21:22] Arguments: --nthreads 9
[2025-10-09 07:21:22] Threads: 9
[2025-10-09 07:21:22] Checking for CVMFS
[2025-10-09 07:21:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 07:21:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 07:21:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 07:21:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 07:21:24] 2.13.2.0 1556042 48760 433164 151491 -599 823 27252348 29414400 16565 16776704 0 124142070 99.519 158123473 29029 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 07:21:24] CVMFS is ok
[2025-10-09 07:21:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 07:21:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 07:21:24] Further information can be found at the LHC@home message board.
[2025-10-09 07:21:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 07:21:24] Checking for apptainer binary...
[2025-10-09 07:21:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 07:21:24] Running /usr/bin/apptainer --version
[2025-10-09 07:21:25] apptainer version 1.4.3-1.el9
[2025-10-09 07:21:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 07:21:31] c6-5-37-4.aglt2.org
[2025-10-09 07:21:31] apptainer works
[2025-10-09 07:21:31] Set ATHENA_PROC_NUMBER=9
[2025-10-09 07:21:31] Set ATHENA_CORE_NUMBER=9
[2025-10-09 07:21:31] Starting ATLAS job with PandaID=6837323750
[2025-10-09 07:21:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 09:43:50]  *** The last 200 lines of the pilot log: ***
[2025-10-09 09:43:50] 2025-10-09 13:42:57,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 09:43:50] 2025-10-09 13:42:57,656 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 09:43:50] 2025-10-09 13:42:57,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 09:43:50] 2025-10-09 13:42:57,659 | INFO     | fitting pss+swap vs Time
[2025-10-09 09:43:50] 2025-10-09 13:42:57,660 | INFO     | sum of square deviations: 797312986.8613161
[2025-10-09 09:43:50] 2025-10-09 13:42:57,661 | INFO     | sum of deviations: 41543040691.788284
[2025-10-09 09:43:50] 2025-10-09 13:42:57,661 | INFO     | mean x: 1760013175.2116787
[2025-10-09 09:43:50] 2025-10-09 13:42:57,661 | INFO     | mean y: 2228660.00729927
[2025-10-09 09:43:50] 2025-10-09 13:42:57,661 | INFO     | -- intersect: -91701155281.76218
[2025-10-09 09:43:50] 2025-10-09 13:42:57,661 | INFO     | intersect: -91701155281.76218
[2025-10-09 09:43:50] 2025-10-09 13:42:57,662 | INFO     | chi2: 2.130595328276592
[2025-10-09 09:43:50] 2025-10-09 13:42:57,662 | INFO     | sum of square deviations: 713171416.6287876
[2025-10-09 09:43:50] 2025-10-09 13:42:57,663 | INFO     | sum of deviations: 39174372084.62123
[2025-10-09 09:43:50] 2025-10-09 13:42:57,663 | INFO     | mean x: 1760013022.719697
[2025-10-09 09:43:50] 2025-10-09 13:42:57,663 | INFO     | mean y: 2224343.5303030303
[2025-10-09 09:43:50] 2025-10-09 13:42:57,663 | INFO     | -- intersect: -96674960717.69896
[2025-10-09 09:43:50] 2025-10-09 13:42:57,663 | INFO     | intersect: -96674960717.69896
[2025-10-09 09:43:50] 2025-10-09 13:42:57,664 | INFO     | chi2: 2.130384534450951
[2025-10-09 09:43:50] 2025-10-09 13:42:57,664 | INFO     | current chi2=2.130384534450951 (change=0.009893658492707414 %)
[2025-10-09 09:43:50] 2025-10-09 13:42:57,664 | INFO     | right removable region: 131
[2025-10-09 09:43:50] 2025-10-09 13:42:57,664 | INFO     | sum of square deviations: 713153726.6287876
[2025-10-09 09:43:50] 2025-10-09 13:42:57,665 | INFO     | sum of deviations: 14924679141.053024
[2025-10-09 09:43:50] 2025-10-09 13:42:57,665 | INFO     | mean x: 1760013327.719697
[2025-10-09 09:43:50] 2025-10-09 13:42:57,665 | INFO     | mean y: 2276478.3257575757
[2025-10-09 09:43:50] 2025-10-09 13:42:57,665 | INFO     | -- intersect: -36830783799.3868
[2025-10-09 09:43:50] 2025-10-09 13:42:57,665 | INFO     | intersect: -36830783799.3868
[2025-10-09 09:43:50] 2025-10-09 13:42:57,666 | INFO     | chi2: 0.13665498374043855
[2025-10-09 09:43:50] 2025-10-09 13:42:57,666 | INFO     | current chi2=0.13665498374043855 (change=93.58606573820958 %)
[2025-10-09 09:43:50] 2025-10-09 13:42:57,666 | INFO     | sum of square deviations: 635134116.3779546
[2025-10-09 09:43:50] 2025-10-09 13:42:57,667 | INFO     | sum of deviations: 9113340232.606298
[2025-10-09 09:43:50] 2025-10-09 13:42:57,667 | INFO     | mean x: 1760013480.2283463
[2025-10-09 09:43:50] 2025-10-09 13:42:57,667 | INFO     | mean y: 2287661.220472441
[2025-10-09 09:43:50] 2025-10-09 13:42:57,667 | INFO     | -- intersect: -25251593756.400616
[2025-10-09 09:43:50] 2025-10-09 13:42:57,667 | INFO     | intersect: -25251593756.400616
[2025-10-09 09:43:50] 2025-10-09 13:42:57,668 | INFO     | chi2: 0.028812315244869224
[2025-10-09 09:43:50] 2025-10-09 13:42:57,668 | INFO     | current chi2=0.028812315244869224 (change=78.9160157527843 %)
[2025-10-09 09:43:50] 2025-10-09 13:42:57,668 | INFO     | sum of square deviations: 563021593.6065564
[2025-10-09 09:43:50] 2025-10-09 13:42:57,669 | INFO     | sum of deviations: 8568191862.754101
[2025-10-09 09:43:50] 2025-10-09 13:42:57,669 | INFO     | mean x: 1760013632.737705
[2025-10-09 09:43:50] 2025-10-09 13:42:57,669 | INFO     | mean y: 2288801.3360655736
[2025-10-09 09:43:50] 2025-10-09 13:42:57,669 | INFO     | -- intersect: -26782002702.938984
[2025-10-09 09:43:50] 2025-10-09 13:42:57,669 | INFO     | intersect: -26782002702.938984
[2025-10-09 09:43:50] 2025-10-09 13:42:57,669 | INFO     | chi2: 0.027710984730905816
[2025-10-09 09:43:50] 2025-10-09 13:42:57,670 | INFO     | current chi2=0.027710984730905816 (change=3.822429765200934 %)
[2025-10-09 09:43:50] 2025-10-09 13:42:57,670 | INFO     | left removable region: 30
[2025-10-09 09:43:50] 2025-10-09 13:42:57,670 | INFO     | sum of square deviations: 319420928.2376231
[2025-10-09 09:43:50] 2025-10-09 13:42:57,671 | INFO     | sum of deviations: 5270635138.732675
[2025-10-09 09:43:50] 2025-10-09 13:42:57,671 | INFO     | mean x: 1760013907.2772276
[2025-10-09 09:43:50] 2025-10-09 13:42:57,671 | INFO     | mean y: 2291992.1881188117
[2025-10-09 09:43:50] 2025-10-09 13:42:57,671 | INFO     | -- intersect: -29038983404.30898
[2025-10-09 09:43:50] 2025-10-09 13:42:57,671 | INFO     | intersect: -29038983404.30898
[2025-10-09 09:43:50] 2025-10-09 13:42:57,671 | INFO     | chi2: 0.02285449048940347
[2025-10-09 09:43:50] 2025-10-09 13:42:57,671 | INFO     | -- intersect: -29038983404.30898
[2025-10-09 09:43:50] 2025-10-09 13:42:57,672 | INFO     | current memory leak: 16.50 B/s (using 101 data points, chi2=0.02)
[2025-10-09 09:43:50] 2025-10-09 13:42:57,672 | INFO     | could have reported an average CPU frequency of 2924 MHz (8 samples)
[2025-10-09 09:43:50] 2025-10-09 13:42:57,672 | INFO     | ..............................
[2025-10-09 09:43:50] 2025-10-09 13:42:57,672 | INFO     | . Timing measurements:
[2025-10-09 09:43:50] 2025-10-09 13:42:57,673 | INFO     | . get job = 0 s
[2025-10-09 09:43:50] 2025-10-09 13:42:57,673 | INFO     | . initial setup = 3 s
[2025-10-09 09:43:50] 2025-10-09 13:42:57,673 | INFO     | . payload setup = 17 s
[2025-10-09 09:43:50] 2025-10-09 13:42:57,673 | INFO     | . stage-in = 0 s
[2025-10-09 09:43:50] 2025-10-09 13:42:57,673 | INFO     | . payload execution = 8355 s
[2025-10-09 09:43:50] 2025-10-09 13:42:57,673 | INFO     | . stage-out = 1 s
[2025-10-09 09:43:50] 2025-10-09 13:42:57,673 | INFO     | . log creation = 0 s
[2025-10-09 09:43:50] 2025-10-09 13:42:57,673 | INFO     | ..............................
[2025-10-09 09:43:50] 2025-10-09 13:42:57,967 | INFO     | 
[2025-10-09 09:43:50] 2025-10-09 13:42:57,968 | INFO     | job summary report
[2025-10-09 09:43:50] 2025-10-09 13:42:57,968 | INFO     | --------------------------------------------------
[2025-10-09 09:43:50] 2025-10-09 13:42:57,968 | INFO     | PanDA job id: 6837323750
[2025-10-09 09:43:50] 2025-10-09 13:42:57,968 | INFO     | task id: 46676269
[2025-10-09 09:43:50] 2025-10-09 13:42:57,968 | INFO     | errors: (none)
[2025-10-09 09:43:50] 2025-10-09 13:42:57,968 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 09:43:50] 2025-10-09 13:42:57,968 | INFO     | pilot state: finished 
[2025-10-09 09:43:50] 2025-10-09 13:42:57,968 | INFO     | transexitcode: 0
[2025-10-09 09:43:50] 2025-10-09 13:42:57,968 | INFO     | exeerrorcode: 0
[2025-10-09 09:43:50] 2025-10-09 13:42:57,968 | INFO     | exeerrordiag: 
[2025-10-09 09:43:50] 2025-10-09 13:42:57,968 | INFO     | exitcode: 0
[2025-10-09 09:43:50] 2025-10-09 13:42:57,968 | INFO     | exitmsg: OK
[2025-10-09 09:43:50] 2025-10-09 13:42:57,968 | INFO     | cpuconsumptiontime: 38774 s
[2025-10-09 09:43:50] 2025-10-09 13:42:57,968 | INFO     | nevents: 400
[2025-10-09 09:43:50] 2025-10-09 13:42:57,968 | INFO     | neventsw: 0
[2025-10-09 09:43:50] 2025-10-09 13:42:57,969 | INFO     | pid: 23123
[2025-10-09 09:43:50] 2025-10-09 13:42:57,969 | INFO     | pgrp: 23123
[2025-10-09 09:43:50] 2025-10-09 13:42:57,969 | INFO     | corecount: 9
[2025-10-09 09:43:50] 2025-10-09 13:42:57,969 | INFO     | event service: False
[2025-10-09 09:43:50] 2025-10-09 13:42:57,969 | INFO     | sizes: {0: 2348685, 1: 2348884, 12: 2348884, 20: 2349174, 22: 2349202, 8376: 2377258, 8379: 2386256, 8380: 2386312, 8386: 2386506}
[2025-10-09 09:43:50] 2025-10-09 13:42:57,969 | INFO     | --------------------------------------------------
[2025-10-09 09:43:50] 2025-10-09 13:42:57,969 | INFO     | 
[2025-10-09 09:43:50] 2025-10-09 13:42:57,969 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-09 09:43:50] 2025-10-09 13:42:57,990 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,990 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,990 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,990 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,990 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,991 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,991 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 09:43:50] 2025-10-09 13:42:57,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,992 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 09:43:50] 2025-10-09 13:42:57,992 | INFO     | job 6837323750 has completed (purged errors)
[2025-10-09 09:43:50] 2025-10-09 13:42:57,992 | INFO     | overall cleanup function is called
[2025-10-09 09:43:50] 2025-10-09 13:42:58,997 | INFO     | --- collectZombieJob: --- 10, [23123]
[2025-10-09 09:43:50] 2025-10-09 13:42:58,997 | INFO     | zombie collector waiting for pid 23123
[2025-10-09 09:43:50] 2025-10-09 13:42:58,997 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 09:43:50] 2025-10-09 13:42:58,997 | INFO     | collected zombie processes
[2025-10-09 09:43:50] 2025-10-09 13:42:58,997 | INFO     | will attempt to kill all subprocesses of pid=23123
[2025-10-09 09:43:50] 2025-10-09 13:42:59,292 | INFO     | process IDs to be killed: [23123] (in reverse order)
[2025-10-09 09:43:50] 2025-10-09 13:42:59,395 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 09:43:50] 2025-10-09 13:42:59,396 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 09:43:50] 2025-10-09 13:42:59,407 | INFO     | did not find any defunct processes belonging to 23123
[2025-10-09 09:43:50] 2025-10-09 13:42:59,419 | INFO     | did not find any defunct processes belonging to 23123
[2025-10-09 09:43:50] 2025-10-09 13:42:59,419 | INFO     | ready for new job
[2025-10-09 09:43:50] 2025-10-09 13:42:59,419 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 09:43:50] 2025-10-09 13:42:59,421 | INFO     | ***************************************
[2025-10-09 09:43:50] 2025-10-09 13:42:59,421 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 09:43:50] 2025-10-09 13:42:59,421 | INFO     | ***************************************
[2025-10-09 09:43:50] 2025-10-09 13:42:59,421 | INFO     | 
[2025-10-09 09:43:50] 2025-10-09 13:42:59,436 | INFO     | architecture information:
[2025-10-09 09:43:50] 2025-10-09 13:42:59,437 | INFO     | executing command: cat /etc/os-release
[2025-10-09 09:43:50] 2025-10-09 13:42:59,451 | INFO     | cat /etc/os-release:
[2025-10-09 09:43:50] NAME="CentOS Linux"
[2025-10-09 09:43:50] VERSION="7 (Core)"
[2025-10-09 09:43:50] ID="centos"
[2025-10-09 09:43:50] ID_LIKE="rhel fedora"
[2025-10-09 09:43:50] VERSION_ID="7"
[2025-10-09 09:43:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 09:43:50] ANSI_COLOR="0;31"
[2025-10-09 09:43:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 09:43:50] HOME_URL="https://www.centos.org/"
[2025-10-09 09:43:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 09:43:50] 
[2025-10-09 09:43:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 09:43:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 09:43:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 09:43:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 09:43:50] 
[2025-10-09 09:43:50] 2025-10-09 13:42:59,452 | INFO     | ***************************************
[2025-10-09 09:43:50] 2025-10-09 13:42:59,954 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-09 09:43:50] 2025-10-09 13:42:59,971 | INFO     | sufficient remaining disk space (73232547840 B)
[2025-10-09 09:43:50] 2025-10-09 13:42:59,972 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 09:43:50] 2025-10-09 13:42:59,972 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 09:43:50] 2025-10-09 13:42:59,972 | INFO     | update_server=False
[2025-10-09 09:43:50] 2025-10-09 13:42:59,972 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 09:43:50] 2025-10-09 13:42:59,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 09:43:50] 2025-10-09 13:43:00,414 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 09:43:50] 2025-10-09 13:43:00,414 | INFO     | aborting loop
[2025-10-09 09:43:50] 2025-10-09 13:43:00,557 | INFO     | all job control threads have been joined
[2025-10-09 09:43:50] 2025-10-09 13:43:00,794 | INFO     | all data control threads have been joined
[2025-10-09 09:43:50] 2025-10-09 13:43:00,845 | INFO     | all payload control threads have been joined
[2025-10-09 09:43:50] 2025-10-09 13:43:00,978 | INFO     | [job] retrieve thread has finished
[2025-10-09 09:43:50] 2025-10-09 13:43:01,260 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 09:43:50] 2025-10-09 13:43:01,346 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 09:43:50] 2025-10-09 13:43:01,347 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 09:43:50] 2025-10-09 13:43:01,419 | INFO     | [job] job monitor thread has finished
[2025-10-09 09:43:50] 2025-10-09 13:43:01,562 | INFO     | [job] control thread has finished
[2025-10-09 09:43:50] 2025-10-09 13:43:01,721 | INFO     | [job] validate thread has finished
[2025-10-09 09:43:50] 2025-10-09 13:43:01,799 | INFO     | [data] control thread has finished
[2025-10-09 09:43:50] 2025-10-09 13:43:01,849 | INFO     | [payload] control thread has finished
[2025-10-09 09:43:50] 2025-10-09 13:43:01,893 | INFO     | [payload] failed_post thread has finished
[2025-10-09 09:43:50] 2025-10-09 13:43:01,978 | INFO     | [data] copytool_out thread has finished
[2025-10-09 09:43:50] 2025-10-09 13:43:02,220 | INFO     | [data] copytool_in thread has finished
[2025-10-09 09:43:50] 2025-10-09 13:43:02,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 09:43:50] 2025-10-09 13:43:02,412 | INFO     | [payload] validate_post thread has finished
[2025-10-09 09:43:50] 2025-10-09 13:43:02,458 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 09:43:50] 2025-10-09 13:43:02,779 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 09:43:50] 2025-10-09 13:43:03,785 | INFO     | [job] queue monitor thread has finished
[2025-10-09 09:43:50] 2025-10-09 13:43:06,418 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 09:43:50] 2025-10-09 13:43:29,887 | INFO     | PID=15498 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 09:43:50] 2025-10-09 13:43:29,888 | INFO     | .. there are 18 such processes running
[2025-10-09 09:43:50] 2025-10-09 13:43:29,890 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 09:43:50] 2025-10-09 13:43:29,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 09:43:50] 2025-10-09 13:43:29,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 09:43:50] 2025-10-09 13:43:43,695 | INFO     | [monitor] cgroup control has ended
[2025-10-09 09:43:50] 2025-10-09 13:43:45,409 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140529231976256)>', '<ExcThread(monitor, started 140528872040192)>']
[2025-10-09 09:43:50] 2025-10-09 13:43:45,964 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 09:43:50] 2025-10-09 13:43:45,964 | INFO     | [monitor] control thread has ended
[2025-10-09 09:43:50] 2025-10-09 13:43:50,435 | INFO     | all workflow threads have been joined
[2025-10-09 09:43:50] 2025-10-09 13:43:50,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 09:43:50] 2025-10-09 13:43:50,435 | INFO     | traces error code: 0
[2025-10-09 09:43:50] 2025-10-09 13:43:50,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 09:43:50] 2025-10-09 13:43:50,590 [wrapper] ==== pilot stdout END ====
[2025-10-09 09:43:50] 2025-10-09 13:43:50,593 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 09:43:50] 2025-10-09 13:43:50,595 [wrapper] pilotpid: 15498
[2025-10-09 09:43:50] 2025-10-09 13:43:50,597 [wrapper] Pilot exit status: 0
[2025-10-09 09:43:50] 2025-10-09 13:43:50,607 [wrapper] pandaids: 6837323750
[2025-10-09 09:43:50] 2025-10-09 13:43:50,667 [wrapper] cleanup supervisor_pilot  501908 15499
[2025-10-09 09:43:50] 2025-10-09 13:43:50,670 [wrapper] Test setup, not cleaning
[2025-10-09 09:43:50] 2025-10-09 13:43:50,673 [wrapper] apfmon messages muted
[2025-10-09 09:43:50] 2025-10-09 13:43:50,675 [wrapper] ==== wrapper stdout END ====
[2025-10-09 09:43:50] 2025-10-09 13:43:50,678 [wrapper] ==== wrapper stderr END ====
[2025-10-09 09:43:50]  *** Error codes and diagnostics ***
[2025-10-09 09:43:50]     "exeErrorCode": 0,
[2025-10-09 09:43:50]     "exeErrorDiag": "",
[2025-10-09 09:43:50]     "pilotErrorCode": 0,
[2025-10-09 09:43:50]     "pilotErrorDiag": "",
[2025-10-09 09:43:50]  *** Listing of results directory ***
[2025-10-09 09:43:50] total 412628
[2025-10-09 09:43:50] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 06:27 pilot3.tar.gz
[2025-10-09 09:43:50] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 06:40 queuedata.json
[2025-10-09 09:43:50] -rwx------. 1 boincer umatlas     36292 Oct  9 06:40 runpilot2-wrapper.sh
[2025-10-09 09:43:50] -rw-r--r--. 1 boincer umatlas       100 Oct  9 07:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 09:43:50] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 07:21 run_atlas
[2025-10-09 09:43:50] -rw-r--r--. 1 boincer umatlas       105 Oct  9 07:21 job.xml
[2025-10-09 09:43:50] -rw-r--r--. 2 boincer umatlas 222145823 Oct  9 07:21 EVNT.46676267._000514.pool.root.1
[2025-10-09 09:43:50] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 07:21 start_atlas.sh
[2025-10-09 09:43:50] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 07:21 shared
[2025-10-09 09:43:50] -rw-r--r--. 2 boincer umatlas    569683 Oct  9 07:21 input.tar.gz
[2025-10-09 09:43:50] -rw-r--r--. 1 boincer umatlas         0 Oct  9 07:21 boinc_lockfile
[2025-10-09 09:43:50] -rw-r--r--. 1 boincer umatlas      2550 Oct  9 07:21 pandaJob.out
[2025-10-09 09:43:50] -rw-------. 1 boincer umatlas    979290 Oct  9 07:22 agis_schedconf.cvmfs.json
[2025-10-09 09:43:50] -rw-------. 1 boincer umatlas   1560401 Oct  9 07:22 agis_ddmendpoints.agis.ALL.json
[2025-10-09 09:43:50] drwx------. 5 boincer umatlas      4096 Oct  9 07:22 pilot3
[2025-10-09 09:43:50] -rw-r--r--. 1 boincer umatlas      6841 Oct  9 09:39 init_data.xml
[2025-10-09 09:43:50] -rw-------. 1 boincer umatlas 193437014 Oct  9 09:42 HITS.46676269._012682.pool.root.1
[2025-10-09 09:43:50] -rw-r--r--. 1 boincer umatlas       529 Oct  9 09:42 boinc_task_state.xml
[2025-10-09 09:43:50] -rw-------. 1 boincer umatlas      1037 Oct  9 09:42 memory_monitor_summary.json
[2025-10-09 09:43:50] -rw-------. 1 boincer umatlas    389091 Oct  9 09:42 log.46676269._012682.job.log.tgz.1
[2025-10-09 09:43:50] -rw-------. 1 boincer umatlas      7820 Oct  9 09:42 heartbeat.json
[2025-10-09 09:43:50] -rw-------. 1 boincer umatlas        95 Oct  9 09:43 pilot_heartbeat.json
[2025-10-09 09:43:50] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 09:43 boinc_mmap_file
[2025-10-09 09:43:50] -rw-r--r--. 1 boincer umatlas        27 Oct  9 09:43 wrapper_checkpoint.txt
[2025-10-09 09:43:50] -rw-------. 1 boincer umatlas      4822 Oct  9 09:43 pilotlog.txt
[2025-10-09 09:43:50] -rw-------. 1 boincer umatlas   1133169 Oct  9 09:43 log.46676269._012682.job.log.1
[2025-10-09 09:43:50] -rw-------. 1 boincer umatlas       357 Oct  9 09:43 output.list
[2025-10-09 09:43:50] -rw-r--r--. 1 boincer umatlas       620 Oct  9 09:43 runtime_log
[2025-10-09 09:43:50] -rw-------. 1 boincer umatlas   1546240 Oct  9 09:43 result.tar.gz
[2025-10-09 09:43:50] -rw-r--r--. 1 boincer umatlas      8708 Oct  9 09:43 runtime_log.err
[2025-10-09 09:43:50] -rw-------. 1 boincer umatlas       652 Oct  9 09:43 LZjMDm0F3Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm57YNDmEJ9hdm.diag
[2025-10-09 09:43:50] -rw-r--r--. 1 boincer umatlas     20982 Oct  9 09:43 stderr.txt
[2025-10-09 09:43:50] HITS file was successfully produced:
[2025-10-09 09:43:50] -rw-------. 1 boincer umatlas 193437014 Oct  9 09:42 shared/HITS.pool.root.1
[2025-10-09 09:43:50]  *** Contents of shared directory: ***
[2025-10-09 09:43:50] total 407936
[2025-10-09 09:43:50] -rw-r--r--. 2 boincer umatlas 222145823 Oct  9 07:21 ATLAS.root_0
[2025-10-09 09:43:50] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 07:21 start_atlas.sh
[2025-10-09 09:43:50] -rw-r--r--. 2 boincer umatlas    569683 Oct  9 07:21 input.tar.gz
[2025-10-09 09:43:50] -rw-------. 1 boincer umatlas 193437014 Oct  9 09:42 HITS.pool.root.1
[2025-10-09 09:43:50] -rw-------. 1 boincer umatlas   1546240 Oct  9 09:43 result.tar.gz
09:43:52 (10710): run_atlas exited; CPU time 39031.287830
09:43:52 (10710): called boinc_finish(0)

</stderr_txt>
]]>

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