Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
03:24:14 (282741): wrapper (7.7.26015): starting
03:24:14 (282741): wrapper: running run_atlas (--nthreads 4)
[2025-10-09 03:24:14] Arguments: --nthreads 4
[2025-10-09 03:24:14] Threads: 4
[2025-10-09 03:24:14] Checking for CVMFS
[2025-10-09 03:24:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 03:24:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 03:24:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 03:24:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 03:24:14] 2.13.2.0 3732220 1950 56456 151500 0 18 3475520 4096001 5496 130560 0 12380033 99.999 69786 698 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-09 03:24:14] CVMFS is ok
[2025-10-09 03:24:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 03:24:14] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-09 03:24:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-09 03:24:14] Further information can be found at the LHC@home message board.
[2025-10-09 03:24:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 03:24:14] Checking for apptainer binary...
[2025-10-09 03:24:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 03:24:14] Running /usr/bin/apptainer --version
[2025-10-09 03:24:14] apptainer version 1.4.3
[2025-10-09 03:24:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 03:24:14] T7810-Ubuntu
[2025-10-09 03:24:14] apptainer works
[2025-10-09 03:24:14] Set ATHENA_PROC_NUMBER=4
[2025-10-09 03:24:14] Set ATHENA_CORE_NUMBER=4
[2025-10-09 03:24:14] Starting ATLAS job with PandaID=6826244147
[2025-10-09 03:24:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 07:01:50]  *** The last 200 lines of the pilot log: ***
[2025-10-09 07:01:50] 2025-10-09 11:00:53,878 | INFO     | sum of square deviations: 2996454322.0
[2025-10-09 07:01:50] 2025-10-09 11:00:53,880 | INFO     | sum of deviations: 13842563836.0
[2025-10-09 07:01:50] 2025-10-09 11:00:53,880 | INFO     | mean x: 1760001151.0
[2025-10-09 07:01:50] 2025-10-09 11:00:53,880 | INFO     | mean y: 2291686.3474178403
[2025-10-09 07:01:50] 2025-10-09 11:00:53,880 | INFO     | -- intersect: -8128293887.835407
[2025-10-09 07:01:50] 2025-10-09 11:00:53,881 | INFO     | intersect: -8128293887.835407
[2025-10-09 07:01:50] 2025-10-09 11:00:53,881 | INFO     | chi2: 2.160334621362027
[2025-10-09 07:01:50] 2025-10-09 11:00:53,881 | INFO     | sum of square deviations: 2790348132.0
[2025-10-09 07:01:50] 2025-10-09 11:00:53,883 | INFO     | sum of deviations: 26747432073.0
[2025-10-09 07:01:50] 2025-10-09 11:00:53,883 | INFO     | mean x: 1760000998.5
[2025-10-09 07:01:50] 2025-10-09 11:00:53,883 | INFO     | mean y: 2301045.8076923075
[2025-10-09 07:01:50] 2025-10-09 11:00:53,883 | INFO     | -- intersect: -16868535469.508858
[2025-10-09 07:01:50] 2025-10-09 11:00:53,883 | INFO     | intersect: -16868535469.508858
[2025-10-09 07:01:50] 2025-10-09 11:00:53,884 | INFO     | chi2: 1.3418518954992016
[2025-10-09 07:01:50] 2025-10-09 11:00:53,884 | INFO     | current chi2=1.3418518954992016 (change=37.88684946162629 %)
[2025-10-09 07:01:50] 2025-10-09 11:00:53,884 | INFO     | sum of square deviations: 2593916542.0
[2025-10-09 07:01:50] 2025-10-09 11:00:53,885 | INFO     | sum of deviations: 25980861543.0
[2025-10-09 07:01:50] 2025-10-09 11:00:53,886 | INFO     | mean x: 1760000846.0
[2025-10-09 07:01:50] 2025-10-09 11:00:53,886 | INFO     | mean y: 2300450.536945813
[2025-10-09 07:01:50] 2025-10-09 11:00:53,886 | INFO     | -- intersect: -17625999286.59811
[2025-10-09 07:01:50] 2025-10-09 11:00:53,886 | INFO     | intersect: -17625999286.59811
[2025-10-09 07:01:50] 2025-10-09 11:00:53,886 | INFO     | chi2: 1.3425725646229683
[2025-10-09 07:01:50] 2025-10-09 11:00:53,887 | INFO     | current chi2=1.3425725646229683 (change=-0.053707054123030784 %)
[2025-10-09 07:01:50] 2025-10-09 11:00:53,887 | INFO     | right removable region: 202
[2025-10-09 07:01:50] 2025-10-09 11:00:53,887 | INFO     | sum of square deviations: 2790348132.0
[2025-10-09 07:01:50] 2025-10-09 11:00:53,888 | INFO     | sum of deviations: -11153413118.000002
[2025-10-09 07:01:50] 2025-10-09 11:00:53,889 | INFO     | mean x: 1760001303.5
[2025-10-09 07:01:50] 2025-10-09 11:00:53,889 | INFO     | mean y: 2309924.153846154
[2025-10-09 07:01:50] 2025-10-09 11:00:53,889 | INFO     | -- intersect: 7037282156.125509
[2025-10-09 07:01:50] 2025-10-09 11:00:53,889 | INFO     | intersect: 7037282156.125509
[2025-10-09 07:01:50] 2025-10-09 11:00:53,889 | INFO     | chi2: 0.8538189665105964
[2025-10-09 07:01:50] 2025-10-09 11:00:53,890 | INFO     | current chi2=0.8538189665105964 (change=60.477466867040775 %)
[2025-10-09 07:01:50] 2025-10-09 11:00:53,890 | INFO     | sum of square deviations: 2593916542.0
[2025-10-09 07:01:50] 2025-10-09 11:00:53,891 | INFO     | sum of deviations: -7813724423.000001
[2025-10-09 07:01:50] 2025-10-09 11:00:53,891 | INFO     | mean x: 1760001456.0
[2025-10-09 07:01:50] 2025-10-09 11:00:53,892 | INFO     | mean y: 2307345.881773399
[2025-10-09 07:01:50] 2025-10-09 11:00:53,892 | INFO     | -- intersect: 5304006972.138585
[2025-10-09 07:01:50] 2025-10-09 11:00:53,892 | INFO     | intersect: 5304006972.138585
[2025-10-09 07:01:50] 2025-10-09 11:00:53,892 | INFO     | chi2: 0.8401310664128196
[2025-10-09 07:01:50] 2025-10-09 11:00:53,892 | INFO     | current chi2=0.8401310664128196 (change=1.6031384444078038 %)
[2025-10-09 07:01:50] 2025-10-09 11:00:53,893 | INFO     | left removable region: 20
[2025-10-09 07:01:50] 2025-10-09 11:00:53,893 | INFO     | sum of square deviations: 1869302025.5
[2025-10-09 07:01:50] 2025-10-09 11:00:53,894 | INFO     | sum of deviations: 3030613437.5
[2025-10-09 07:01:50] 2025-10-09 11:00:53,894 | INFO     | mean x: 1760001425.5
[2025-10-09 07:01:50] 2025-10-09 11:00:53,894 | INFO     | mean y: 2318902.8076923075
[2025-10-09 07:01:50] 2025-10-09 11:00:53,894 | INFO     | -- intersect: -2851090496.7315555
[2025-10-09 07:01:50] 2025-10-09 11:00:53,895 | INFO     | intersect: -2851090496.7315555
[2025-10-09 07:01:50] 2025-10-09 11:00:53,895 | INFO     | chi2: 0.0003483194215481479
[2025-10-09 07:01:50] 2025-10-09 11:00:53,895 | INFO     | -- intersect: -2851090496.7315555
[2025-10-09 07:01:50] 2025-10-09 11:00:53,895 | INFO     | current memory leak: 1.62 B/s (using 182 data points, chi2=0.00)
[2025-10-09 07:01:50] 2025-10-09 11:00:53,896 | INFO     | could have reported an average CPU frequency of 2810 MHz (11 samples)
[2025-10-09 07:01:50] 2025-10-09 11:00:53,896 | INFO     | ..............................
[2025-10-09 07:01:50] 2025-10-09 11:00:53,896 | INFO     | . Timing measurements:
[2025-10-09 07:01:50] 2025-10-09 11:00:53,896 | INFO     | . get job = 0 s
[2025-10-09 07:01:50] 2025-10-09 11:00:53,896 | INFO     | . initial setup = 3 s
[2025-10-09 07:01:50] 2025-10-09 11:00:53,896 | INFO     | . payload setup = 3 s
[2025-10-09 07:01:50] 2025-10-09 11:00:53,896 | INFO     | . stage-in = 0 s
[2025-10-09 07:01:50] 2025-10-09 11:00:53,897 | INFO     | . payload execution = 12958 s
[2025-10-09 07:01:50] 2025-10-09 11:00:53,897 | INFO     | . stage-out = 3 s
[2025-10-09 07:01:50] 2025-10-09 11:00:53,897 | INFO     | . log creation = 0 s
[2025-10-09 07:01:50] 2025-10-09 11:00:53,897 | INFO     | ..............................
[2025-10-09 07:01:50] 2025-10-09 11:00:53,928 | INFO     | time since job start (12990s) is within the limit (172800.0s)
[2025-10-09 07:01:50] 2025-10-09 11:00:54,046 | INFO     | 
[2025-10-09 07:01:50] 2025-10-09 11:00:54,046 | INFO     | job summary report
[2025-10-09 07:01:50] 2025-10-09 11:00:54,046 | INFO     | --------------------------------------------------
[2025-10-09 07:01:50] 2025-10-09 11:00:54,046 | INFO     | PanDA job id: 6826244147
[2025-10-09 07:01:50] 2025-10-09 11:00:54,046 | INFO     | task id: 46373048
[2025-10-09 07:01:50] 2025-10-09 11:00:54,046 | INFO     | errors: (none)
[2025-10-09 07:01:50] 2025-10-09 11:00:54,047 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 07:01:50] 2025-10-09 11:00:54,047 | INFO     | pilot state: finished 
[2025-10-09 07:01:50] 2025-10-09 11:00:54,047 | INFO     | transexitcode: 0
[2025-10-09 07:01:50] 2025-10-09 11:00:54,047 | INFO     | exeerrorcode: 0
[2025-10-09 07:01:50] 2025-10-09 11:00:54,047 | INFO     | exeerrordiag: 
[2025-10-09 07:01:50] 2025-10-09 11:00:54,047 | INFO     | exitcode: 0
[2025-10-09 07:01:50] 2025-10-09 11:00:54,047 | INFO     | exitmsg: OK
[2025-10-09 07:01:50] 2025-10-09 11:00:54,047 | INFO     | cpuconsumptiontime: 50908 s
[2025-10-09 07:01:50] 2025-10-09 11:00:54,048 | INFO     | nevents: 400
[2025-10-09 07:01:50] 2025-10-09 11:00:54,048 | INFO     | neventsw: 0
[2025-10-09 07:01:50] 2025-10-09 11:00:54,048 | INFO     | pid: 293741
[2025-10-09 07:01:50] 2025-10-09 11:00:54,048 | INFO     | pgrp: 293741
[2025-10-09 07:01:50] 2025-10-09 11:00:54,048 | INFO     | corecount: 4
[2025-10-09 07:01:50] 2025-10-09 11:00:54,048 | INFO     | event service: False
[2025-10-09 07:01:50] 2025-10-09 11:00:54,048 | INFO     | sizes: {0: 2348804, 3: 2349066, 10: 2349094, 12966: 2379099, 12969: 2388125, 12970: 2388181, 12977: 2388503}
[2025-10-09 07:01:50] 2025-10-09 11:00:54,048 | INFO     | --------------------------------------------------
[2025-10-09 07:01:50] 2025-10-09 11:00:54,048 | INFO     | 
[2025-10-09 07:01:50] 2025-10-09 11:00:54,049 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/8
[2025-10-09 07:01:50] 2025-10-09 11:00:54,068 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,068 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,068 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,069 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,069 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,069 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,070 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,070 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,070 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,070 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 07:01:50] 2025-10-09 11:00:54,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,071 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 07:01:50] 2025-10-09 11:00:54,071 | INFO     | job 6826244147 has completed (purged errors)
[2025-10-09 07:01:50] 2025-10-09 11:00:54,071 | INFO     | overall cleanup function is called
[2025-10-09 07:01:50] 2025-10-09 11:00:55,080 | INFO     | --- collectZombieJob: --- 10, [293741]
[2025-10-09 07:01:50] 2025-10-09 11:00:55,080 | INFO     | zombie collector waiting for pid 293741
[2025-10-09 07:01:50] 2025-10-09 11:00:55,080 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 07:01:50] 2025-10-09 11:00:55,080 | INFO     | collected zombie processes
[2025-10-09 07:01:50] 2025-10-09 11:00:55,080 | INFO     | will attempt to kill all subprocesses of pid=293741
[2025-10-09 07:01:50] 2025-10-09 11:00:55,608 | INFO     | process IDs to be killed: [293741] (in reverse order)
[2025-10-09 07:01:50] 2025-10-09 11:00:55,726 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 07:01:50] 2025-10-09 11:00:55,727 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 07:01:50] 2025-10-09 11:00:55,739 | INFO     | did not find any defunct processes belonging to 293741
[2025-10-09 07:01:50] 2025-10-09 11:00:55,749 | INFO     | did not find any defunct processes belonging to 293741
[2025-10-09 07:01:50] 2025-10-09 11:00:55,749 | INFO     | ready for new job
[2025-10-09 07:01:50] 2025-10-09 11:00:55,749 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 07:01:50] 2025-10-09 11:00:55,752 | INFO     | ***************************************
[2025-10-09 07:01:50] 2025-10-09 11:00:55,752 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 07:01:50] 2025-10-09 11:00:55,752 | INFO     | ***************************************
[2025-10-09 07:01:50] 2025-10-09 11:00:55,752 | INFO     | 
[2025-10-09 07:01:50] 2025-10-09 11:00:55,756 | INFO     | architecture information:
[2025-10-09 07:01:50] 2025-10-09 11:00:55,756 | INFO     | executing command: cat /etc/os-release
[2025-10-09 07:01:50] 2025-10-09 11:00:55,770 | INFO     | cat /etc/os-release:
[2025-10-09 07:01:50] NAME="CentOS Linux"
[2025-10-09 07:01:50] VERSION="7 (Core)"
[2025-10-09 07:01:50] ID="centos"
[2025-10-09 07:01:50] ID_LIKE="rhel fedora"
[2025-10-09 07:01:50] VERSION_ID="7"
[2025-10-09 07:01:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 07:01:50] ANSI_COLOR="0;31"
[2025-10-09 07:01:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 07:01:50] HOME_URL="https://www.centos.org/"
[2025-10-09 07:01:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 07:01:50] 
[2025-10-09 07:01:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 07:01:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 07:01:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 07:01:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 07:01:50] 
[2025-10-09 07:01:50] 2025-10-09 11:00:55,770 | INFO     | ***************************************
[2025-10-09 07:01:50] 2025-10-09 11:00:56,273 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/8
[2025-10-09 07:01:50] 2025-10-09 11:00:56,290 | INFO     | sufficient remaining disk space (397061128192 B)
[2025-10-09 07:01:50] 2025-10-09 11:00:56,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 07:01:50] 2025-10-09 11:00:56,291 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 07:01:50] 2025-10-09 11:00:56,291 | INFO     | update_server=False
[2025-10-09 07:01:50] 2025-10-09 11:00:56,291 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 07:01:50] 2025-10-09 11:00:56,456 | INFO     | all job control threads have been joined
[2025-10-09 07:01:50] 2025-10-09 11:00:56,465 | INFO     | all payload control threads have been joined
[2025-10-09 07:01:50] 2025-10-09 11:00:56,544 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 07:01:50] 2025-10-09 11:00:56,664 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 07:01:50] 2025-10-09 11:00:56,664 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 07:01:50] 2025-10-09 11:00:56,664 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 07:01:50] 2025-10-09 11:00:56,664 | INFO     | will abort loop
[2025-10-09 07:01:50] 2025-10-09 11:00:56,826 | INFO     | all data control threads have been joined
[2025-10-09 07:01:50] 2025-10-09 11:00:57,296 | INFO     | [job] retrieve thread has finished
[2025-10-09 07:01:50] 2025-10-09 11:00:57,310 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 07:01:50] 2025-10-09 11:00:57,461 | INFO     | [job] control thread has finished
[2025-10-09 07:01:50] 2025-10-09 11:00:57,467 | INFO     | [payload] control thread has finished
[2025-10-09 07:01:50] 2025-10-09 11:00:57,669 | INFO     | [job] job monitor thread has finished
[2025-10-09 07:01:50] 2025-10-09 11:00:57,832 | INFO     | [data] control thread has finished
[2025-10-09 07:01:50] 2025-10-09 11:00:57,916 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 07:01:50] 2025-10-09 11:00:58,243 | INFO     | [data] copytool_in thread has finished
[2025-10-09 07:01:50] 2025-10-09 11:00:58,253 | INFO     | [payload] validate_post thread has finished
[2025-10-09 07:01:50] 2025-10-09 11:00:58,286 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 07:01:50] 2025-10-09 11:00:58,537 | INFO     | [job] validate thread has finished
[2025-10-09 07:01:50] 2025-10-09 11:00:58,548 | INFO     | [data] copytool_out thread has finished
[2025-10-09 07:01:50] 2025-10-09 11:00:58,748 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 07:01:50] 2025-10-09 11:00:58,833 | INFO     | [payload] failed_post thread has finished
[2025-10-09 07:01:50] 2025-10-09 11:00:59,019 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 07:01:50] 2025-10-09 11:01:00,024 | INFO     | [job] queue monitor thread has finished
[2025-10-09 07:01:50] 2025-10-09 11:01:01,922 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 07:01:50] 2025-10-09 11:01:06,962 | INFO     | job.realtimelogging is not enabled
[2025-10-09 07:01:50] 2025-10-09 11:01:07,967 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 07:01:50] 2025-10-09 11:01:27,553 | INFO     | PID=286768 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 07:01:50] 2025-10-09 11:01:27,553 | INFO     | .. there are 16 such processes running
[2025-10-09 07:01:50] 2025-10-09 11:01:27,554 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 07:01:50] 2025-10-09 11:01:27,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 07:01:50] 2025-10-09 11:01:27,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 07:01:50] 2025-10-09 11:01:43,079 | INFO     | [monitor] cgroup control has ended
[2025-10-09 07:01:50] 2025-10-09 11:01:44,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129771860117312)>', '<ExcThread(monitor, started 129771094669056)>']
[2025-10-09 07:01:50] 2025-10-09 11:01:45,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 07:01:50] 2025-10-09 11:01:45,626 | INFO     | [monitor] control thread has ended
[2025-10-09 07:01:50] 2025-10-09 11:01:49,950 | INFO     | all workflow threads have been joined
[2025-10-09 07:01:50] 2025-10-09 11:01:49,950 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 07:01:50] 2025-10-09 11:01:49,951 | INFO     | traces error code: 0
[2025-10-09 07:01:50] 2025-10-09 11:01:49,951 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 07:01:50] 2025-10-09 11:01:50,070 [wrapper] ==== pilot stdout END ====
[2025-10-09 07:01:50] 2025-10-09 11:01:50,073 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 07:01:50] 2025-10-09 11:01:50,075 [wrapper] pilotpid: 286768
[2025-10-09 07:01:50] 2025-10-09 11:01:50,078 [wrapper] Pilot exit status: 0
[2025-10-09 07:01:50] 2025-10-09 11:01:50,088 [wrapper] pandaids: 6826244147
[2025-10-09 07:01:50] 2025-10-09 11:01:50,160 [wrapper] cleanup supervisor_pilot  955916 286769
[2025-10-09 07:01:50] 2025-10-09 11:01:50,163 [wrapper] Test setup, not cleaning
[2025-10-09 07:01:50] 2025-10-09 11:01:50,166 [wrapper] apfmon messages muted
[2025-10-09 07:01:50] 2025-10-09 11:01:50,169 [wrapper] ==== wrapper stdout END ====
[2025-10-09 07:01:50] 2025-10-09 11:01:50,172 [wrapper] ==== wrapper stderr END ====
[2025-10-09 07:01:50]  *** Error codes and diagnostics ***
[2025-10-09 07:01:50]     "exeErrorCode": 0,
[2025-10-09 07:01:50]     "exeErrorDiag": "",
[2025-10-09 07:01:50]     "pilotErrorCode": 0,
[2025-10-09 07:01:50]     "pilotErrorDiag": "",
[2025-10-09 07:01:50]  *** Listing of results directory ***
[2025-10-09 07:01:50] total 416872
[2025-10-09 07:01:50] -rw-r--r-- 1 whitlerd whitlerd    552446 Sep 30 21:25 pilot3.tar.gz
[2025-10-09 07:01:50] -rw-r--r-- 1 whitlerd whitlerd      5112 Sep 30 21:37 queuedata.json
[2025-10-09 07:01:50] -rwx------ 1 whitlerd whitlerd     36292 Sep 30 21:38 runpilot2-wrapper.sh
[2025-10-09 07:01:50] -rw-rw-r-- 1 whitlerd whitlerd       100 Oct  9 03:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 07:01:50] -rwxr-xr-x 1 whitlerd whitlerd      7986 Oct  9 03:24 run_atlas
[2025-10-09 07:01:50] -rw-rw-r-- 1 whitlerd whitlerd       105 Oct  9 03:24 job.xml
[2025-10-09 07:01:50] -rw-r--r-- 2 whitlerd whitlerd 220013365 Oct  9 03:24 EVNT.46373045._002472.pool.root.1
[2025-10-09 07:01:50] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct  9 03:24 start_atlas.sh
[2025-10-09 07:01:50] drwxrwx--x 2 whitlerd whitlerd      4096 Oct  9 03:24 shared
[2025-10-09 07:01:50] -rw-r--r-- 2 whitlerd whitlerd    565608 Oct  9 03:24 input.tar.gz
[2025-10-09 07:01:50] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct  9 03:24 boinc_setup_complete
[2025-10-09 07:01:50] -rw-rw-r-- 1 whitlerd whitlerd      8956 Oct  9 03:24 init_data.xml
[2025-10-09 07:01:50] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct  9 03:24 boinc_lockfile
[2025-10-09 07:01:50] -rw-rw-r-- 1 whitlerd whitlerd      2537 Oct  9 03:24 pandaJob.out
[2025-10-09 07:01:50] -rw------- 1 whitlerd whitlerd    979298 Oct  9 03:24 agis_schedconf.cvmfs.json
[2025-10-09 07:01:50] drwx------ 4 whitlerd whitlerd      4096 Oct  9 03:24 pilot3
[2025-10-09 07:01:50] -rw------- 1 whitlerd whitlerd 198519469 Oct  9 07:00 HITS.46373048._074545.pool.root.1
[2025-10-09 07:01:50] -rw-rw-r-- 1 whitlerd whitlerd       530 Oct  9 07:00 boinc_task_state.xml
[2025-10-09 07:01:50] -rw------- 1 whitlerd whitlerd      1033 Oct  9 07:00 memory_monitor_summary.json
[2025-10-09 07:01:50] -rw------- 1 whitlerd whitlerd   1560401 Oct  9 07:00 agis_ddmendpoints.agis.ALL.json
[2025-10-09 07:01:50] -rw------- 1 whitlerd whitlerd    397281 Oct  9 07:00 log.46373048._074545.job.log.tgz.1
[2025-10-09 07:01:50] -rw------- 1 whitlerd whitlerd      7790 Oct  9 07:00 heartbeat.json
[2025-10-09 07:01:50] -rw------- 1 whitlerd whitlerd        95 Oct  9 07:01 pilot_heartbeat.json
[2025-10-09 07:01:50] -rw-rw-r-- 1 whitlerd whitlerd      8192 Oct  9 07:01 boinc_mmap_file
[2025-10-09 07:01:50] -rw-rw-r-- 1 whitlerd whitlerd        28 Oct  9 07:01 wrapper_checkpoint.txt
[2025-10-09 07:01:50] -rw------- 1 whitlerd whitlerd      5096 Oct  9 07:01 pilotlog.txt
[2025-10-09 07:01:50] -rw------- 1 whitlerd whitlerd   1823540 Oct  9 07:01 log.46373048._074545.job.log.1
[2025-10-09 07:01:50] -rw------- 1 whitlerd whitlerd       357 Oct  9 07:01 output.list
[2025-10-09 07:01:50] -rw-rw-r-- 1 whitlerd whitlerd       620 Oct  9 07:01 runtime_log
[2025-10-09 07:01:50] -rw------- 1 whitlerd whitlerd   2242560 Oct  9 07:01 result.tar.gz
[2025-10-09 07:01:50] -rw-rw-r-- 1 whitlerd whitlerd      8879 Oct  9 07:01 runtime_log.err
[2025-10-09 07:01:50] -rw------- 1 whitlerd whitlerd       651 Oct  9 07:01 CS7KDmoy0N8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlbANDm0duLfm.diag
[2025-10-09 07:01:50] -rw-rw-r-- 1 whitlerd whitlerd     21030 Oct  9 07:01 stderr.txt
[2025-10-09 07:01:50] HITS file was successfully produced:
[2025-10-09 07:01:50] -rw------- 1 whitlerd whitlerd 198519469 Oct  9 07:00 shared/HITS.pool.root.1
[2025-10-09 07:01:50]  *** Contents of shared directory: ***
[2025-10-09 07:01:50] total 411500
[2025-10-09 07:01:50] -rw-r--r-- 2 whitlerd whitlerd 220013365 Oct  9 03:24 ATLAS.root_0
[2025-10-09 07:01:50] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct  9 03:24 start_atlas.sh
[2025-10-09 07:01:50] -rw-r--r-- 2 whitlerd whitlerd    565608 Oct  9 03:24 input.tar.gz
[2025-10-09 07:01:50] -rw------- 1 whitlerd whitlerd 198519469 Oct  9 07:00 HITS.pool.root.1
[2025-10-09 07:01:50] -rw------- 1 whitlerd whitlerd   2242560 Oct  9 07:01 result.tar.gz
07:01:51 (282741): run_atlas exited; CPU time 51609.289706
07:01:51 (282741): called boinc_finish(0)

</stderr_txt>
]]>

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