Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:58:53 (3061751): wrapper (7.7.26015): starting
00:58:53 (3061751): wrapper: running run_atlas (--nthreads 11)
[2025-10-09 00:58:53] Arguments: --nthreads 11
[2025-10-09 00:58:53] Threads: 11
[2025-10-09 00:58:53] Checking for CVMFS
[2025-10-09 00:58:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 00:58:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 00:58:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 00:58:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 00:58:53] 2.13.2.0 1556042 48377 425732 151491 -216 615 25308033 29414400 14949 16776704 0 123020334 99.514 157923777 29046 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 00:58:53] CVMFS is ok
[2025-10-09 00:58:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 00:58:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 00:58:53] Further information can be found at the LHC@home message board.
[2025-10-09 00:58:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 00:58:53] Checking for apptainer binary...
[2025-10-09 00:58:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 00:58:53] Running /usr/bin/apptainer --version
[2025-10-09 00:58:53] apptainer version 1.4.3-1.el9
[2025-10-09 00:58:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 00:58:56] c6-5-37-4.aglt2.org
[2025-10-09 00:58:56] apptainer works
[2025-10-09 00:58:56] Set ATHENA_PROC_NUMBER=11
[2025-10-09 00:58:56] Set ATHENA_CORE_NUMBER=11
[2025-10-09 00:58:56] Starting ATLAS job with PandaID=6832567687
[2025-10-09 00:58:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 01:50:15]  *** The last 200 lines of the pilot log: ***
[2025-10-09 01:50:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-09 01:50:15]  replicas=None
[2025-10-09 01:50:15]  scope=mc23_13p6TeV
[2025-10-09 01:50:15]  status=None
[2025-10-09 01:50:15]  status_code=0
[2025-10-09 01:50:15]  storage_token=
[2025-10-09 01:50:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6832567687/log.46376905._109192.job.log.tgz.1
[2025-10-09 01:50:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/d5/log.46376905._109192.job.log.tgz.1
[2025-10-09 01:50:15]  workdir=None
[2025-10-09 01:50:15] ]
[2025-10-09 01:50:15] 2025-10-09 05:49:15,309 | INFO     | transferring file log.46376905._109192.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6832567687/log.46376905._109192.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-09 01:50:15] 2025-10-09 05:49:15,310 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6832567687/log.46376905._109192.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._109192.job
[2025-10-09 01:50:15] 2025-10-09 05:49:15,326 | INFO     | adding to output.list: log.46376905._109192.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/d5/log.46376905._109192.job.log.tg
[2025-10-09 01:50:15] 2025-10-09 05:49:15,327 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-09 01:50:15] 2025-10-09 05:49:15,327 | INFO     | summary of transferred files:
[2025-10-09 01:50:15] 2025-10-09 05:49:15,327 | INFO     |  -- lfn=log.46376905._109192.job.log.tgz.1, status_code=0, status=transferred
[2025-10-09 01:50:15] 2025-10-09 05:49:15,328 | INFO     | stage-out finished correctly
[2025-10-09 01:50:15] 2025-10-09 05:49:15,540 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 01:50:15] 2025-10-09 05:49:16,171 | INFO     | job 6832567687 has state=finished
[2025-10-09 01:50:15] 2025-10-09 05:49:16,171 | INFO     | preparing for final server update for job 6832567687 in state='finished'
[2025-10-09 01:50:15] 2025-10-09 05:49:16,172 | INFO     | this job has now completed (state=finished)
[2025-10-09 01:50:15] 2025-10-09 05:49:16,172 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 01:50:15] 2025-10-09 05:49:16,173 | INFO     | log transfer has been attempted: DONE
[2025-10-09 01:50:15] 2025-10-09 05:49:16,173 | INFO     | job 6832567687 has finished - writing final server update
[2025-10-09 01:50:15] 2025-10-09 05:49:16,173 | INFO     | total number of processed events: 400 (read)
[2025-10-09 01:50:15] 2025-10-09 05:49:16,175 | INFO     | executing command: lscpu
[2025-10-09 01:50:15] 2025-10-09 05:49:16,242 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 01:50:15] 2025-10-09 05:49:16,861 | INFO     | monitor loop #227: job 0:6832567687 is in state 'finished'
[2025-10-09 01:50:15] 2025-10-09 05:49:16,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 01:50:15] 2025-10-09 05:49:17,091 | INFO     | time since job start (3013s) is within the limit (172800.0s)
[2025-10-09 01:50:15] 2025-10-09 05:49:19,096 | INFO     | time since job start (3015s) is within the limit (172800.0s)
[2025-10-09 01:50:15] 2025-10-09 05:49:19,365 | INFO     | monitor loop #228: job 0:6832567687 is in state 'finished'
[2025-10-09 01:50:15] 2025-10-09 05:49:19,366 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 01:50:15] 2025-10-09 05:49:19,420 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-09 01:50:15] 2025-10-09 05:49:19,428 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2886.5294642857143
[2025-10-09 01:50:15] 2025-10-09 05:49:19,437 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6832567687/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 01:50:15] 2025-10-09 05:49:19,438 | INFO     | extracted standard info from prmon json
[2025-10-09 01:50:15] 2025-10-09 05:49:19,438 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 01:50:15] 2025-10-09 05:49:19,438 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 01:50:15] 2025-10-09 05:49:19,439 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 01:50:15] 2025-10-09 05:49:19,439 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 01:50:15] 2025-10-09 05:49:19,441 | INFO     | fitting pss+swap vs Time
[2025-10-09 01:50:15] 2025-10-09 05:49:19,441 | INFO     | sum of square deviations: 22960430.5
[2025-10-09 01:50:15] 2025-10-09 05:49:19,441 | INFO     | sum of deviations: 2142205991.0
[2025-10-09 01:50:15] 2025-10-09 05:49:19,441 | INFO     | mean x: 1759987522.5
[2025-10-09 01:50:15] 2025-10-09 05:49:19,441 | INFO     | mean y: 2723990.476190476
[2025-10-09 01:50:15] 2025-10-09 05:49:19,441 | INFO     | -- intersect: -164203945165.1717
[2025-10-09 01:50:15] 2025-10-09 05:49:19,442 | INFO     | intersect: -164203945165.1717
[2025-10-09 01:50:15] 2025-10-09 05:49:19,442 | INFO     | chi2: 0.04032549432110621
[2025-10-09 01:50:15] 2025-10-09 05:49:19,442 | INFO     | -- intersect: -164203945165.1717
[2025-10-09 01:50:15] 2025-10-09 05:49:19,442 | INFO     | current memory leak: 93.30 B/s (using 42 data points, chi2=0.04)
[2025-10-09 01:50:15] 2025-10-09 05:49:19,442 | INFO     | could have reported an average CPU frequency of 3171 MHz (5 samples)
[2025-10-09 01:50:15] 2025-10-09 05:49:19,442 | INFO     | ..............................
[2025-10-09 01:50:15] 2025-10-09 05:49:19,443 | INFO     | . Timing measurements:
[2025-10-09 01:50:15] 2025-10-09 05:49:19,443 | INFO     | . get job = 0 s
[2025-10-09 01:50:15] 2025-10-09 05:49:19,443 | INFO     | . initial setup = 2 s
[2025-10-09 01:50:15] 2025-10-09 05:49:19,443 | INFO     | . payload setup = 4 s
[2025-10-09 01:50:15] 2025-10-09 05:49:19,443 | INFO     | . stage-in = 0 s
[2025-10-09 01:50:15] 2025-10-09 05:49:19,443 | INFO     | . payload execution = 2987 s
[2025-10-09 01:50:15] 2025-10-09 05:49:19,443 | INFO     | . stage-out = 0 s
[2025-10-09 01:50:15] 2025-10-09 05:49:19,443 | INFO     | . log creation = 0 s
[2025-10-09 01:50:15] 2025-10-09 05:49:19,443 | INFO     | ..............................
[2025-10-09 01:50:15] 2025-10-09 05:49:19,816 | INFO     | 
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | job summary report
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | --------------------------------------------------
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | PanDA job id: 6832567687
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | task id: 46376905
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | errors: (none)
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | pilot state: finished 
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | transexitcode: 0
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | exeerrorcode: 0
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | exeerrordiag: 
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | exitcode: 0
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | exitmsg: OK
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | cpuconsumptiontime: 28916 s
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | nevents: 400
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | neventsw: 0
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | pid: 3072491
[2025-10-09 01:50:15] 2025-10-09 05:49:19,817 | INFO     | pgrp: 3072491
[2025-10-09 01:50:15] 2025-10-09 05:49:19,818 | INFO     | corecount: 11
[2025-10-09 01:50:15] 2025-10-09 05:49:19,818 | INFO     | event service: False
[2025-10-09 01:50:15] 2025-10-09 05:49:19,818 | INFO     | sizes: {0: 2347992, 1: 2348848, 5: 2349110, 12: 2349166, 2995: 2374601, 2996: 2383782, 2997: 2383782, 3000: 2384008}
[2025-10-09 01:50:15] 2025-10-09 05:49:19,818 | INFO     | --------------------------------------------------
[2025-10-09 01:50:15] 2025-10-09 05:49:19,818 | INFO     | 
[2025-10-09 01:50:15] 2025-10-09 05:49:19,818 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-09 01:50:15] 2025-10-09 05:49:19,833 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,834 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,834 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,834 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,834 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,835 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,835 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,835 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,835 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,835 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,835 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 01:50:15] 2025-10-09 05:49:19,835 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,835 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 01:50:15] 2025-10-09 05:49:19,835 | INFO     | job 6832567687 has completed (purged errors)
[2025-10-09 01:50:15] 2025-10-09 05:49:19,835 | INFO     | overall cleanup function is called
[2025-10-09 01:50:15] 2025-10-09 05:49:20,843 | INFO     | --- collectZombieJob: --- 10, [3072491]
[2025-10-09 01:50:15] 2025-10-09 05:49:20,843 | INFO     | zombie collector waiting for pid 3072491
[2025-10-09 01:50:15] 2025-10-09 05:49:20,843 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 01:50:15] 2025-10-09 05:49:20,843 | INFO     | collected zombie processes
[2025-10-09 01:50:15] 2025-10-09 05:49:20,843 | INFO     | will attempt to kill all subprocesses of pid=3072491
[2025-10-09 01:50:15] 2025-10-09 05:49:21,008 | INFO     | process IDs to be killed: [3072491] (in reverse order)
[2025-10-09 01:50:15] 2025-10-09 05:49:21,122 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 01:50:15] 2025-10-09 05:49:21,122 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 01:50:15] 2025-10-09 05:49:21,133 | INFO     | did not find any defunct processes belonging to 3072491
[2025-10-09 01:50:15] 2025-10-09 05:49:21,146 | INFO     | did not find any defunct processes belonging to 3072491
[2025-10-09 01:50:15] 2025-10-09 05:49:21,147 | INFO     | ready for new job
[2025-10-09 01:50:15] 2025-10-09 05:49:21,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 01:50:15] 2025-10-09 05:49:21,149 | INFO     | ***************************************
[2025-10-09 01:50:15] 2025-10-09 05:49:21,149 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 01:50:15] 2025-10-09 05:49:21,149 | INFO     | ***************************************
[2025-10-09 01:50:15] 2025-10-09 05:49:21,150 | INFO     | 
[2025-10-09 01:50:15] 2025-10-09 05:49:21,165 | INFO     | architecture information:
[2025-10-09 01:50:15] 2025-10-09 05:49:21,166 | INFO     | executing command: cat /etc/os-release
[2025-10-09 01:50:15] 2025-10-09 05:49:21,182 | INFO     | cat /etc/os-release:
[2025-10-09 01:50:15] NAME="CentOS Linux"
[2025-10-09 01:50:15] VERSION="7 (Core)"
[2025-10-09 01:50:15] ID="centos"
[2025-10-09 01:50:15] ID_LIKE="rhel fedora"
[2025-10-09 01:50:15] VERSION_ID="7"
[2025-10-09 01:50:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 01:50:15] ANSI_COLOR="0;31"
[2025-10-09 01:50:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 01:50:15] HOME_URL="https://www.centos.org/"
[2025-10-09 01:50:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 01:50:15] 
[2025-10-09 01:50:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 01:50:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 01:50:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 01:50:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 01:50:15] 
[2025-10-09 01:50:15] 2025-10-09 05:49:21,183 | INFO     | ***************************************
[2025-10-09 01:50:15] 2025-10-09 05:49:21,686 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-09 01:50:15] 2025-10-09 05:49:21,704 | INFO     | sufficient remaining disk space (75528929280 B)
[2025-10-09 01:50:15] 2025-10-09 05:49:21,705 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 01:50:15] 2025-10-09 05:49:21,705 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 01:50:15] 2025-10-09 05:49:21,706 | INFO     | update_server=False
[2025-10-09 01:50:15] 2025-10-09 05:49:21,706 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 01:50:15] 2025-10-09 05:49:21,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 01:50:15] 2025-10-09 05:49:21,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 01:50:15] 2025-10-09 05:49:21,869 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 01:50:15] 2025-10-09 05:49:21,869 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 01:50:15] 2025-10-09 05:49:21,869 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 01:50:15] 2025-10-09 05:49:21,869 | INFO     | will abort loop
[2025-10-09 01:50:15] 2025-10-09 05:49:22,221 | INFO     | all payload control threads have been joined
[2025-10-09 01:50:15] 2025-10-09 05:49:22,633 | INFO     | all data control threads have been joined
[2025-10-09 01:50:15] 2025-10-09 05:49:22,711 | INFO     | [job] retrieve thread has finished
[2025-10-09 01:50:15] 2025-10-09 05:49:22,874 | INFO     | [job] job monitor thread has finished
[2025-10-09 01:50:15] 2025-10-09 05:49:22,937 | INFO     | all job control threads have been joined
[2025-10-09 01:50:15] 2025-10-09 05:49:23,019 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 01:50:15] 2025-10-09 05:49:23,226 | INFO     | [payload] control thread has finished
[2025-10-09 01:50:15] 2025-10-09 05:49:23,589 | INFO     | [data] copytool_in thread has finished
[2025-10-09 01:50:15] 2025-10-09 05:49:23,629 | INFO     | [payload] validate_post thread has finished
[2025-10-09 01:50:15] 2025-10-09 05:49:23,639 | INFO     | [data] control thread has finished
[2025-10-09 01:50:15] 2025-10-09 05:49:23,712 | INFO     | [data] copytool_out thread has finished
[2025-10-09 01:50:15] 2025-10-09 05:49:23,714 | INFO     | [payload] failed_post thread has finished
[2025-10-09 01:50:15] 2025-10-09 05:49:23,924 | INFO     | [job] validate thread has finished
[2025-10-09 01:50:15] 2025-10-09 05:49:23,942 | INFO     | [job] control thread has finished
[2025-10-09 01:50:15] 2025-10-09 05:49:24,020 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 01:50:15] 2025-10-09 05:49:24,091 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 01:50:15] 2025-10-09 05:49:24,531 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 01:50:15] 2025-10-09 05:49:25,536 | INFO     | [job] queue monitor thread has finished
[2025-10-09 01:50:15] 2025-10-09 05:49:25,712 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 01:50:15] 2025-10-09 05:49:32,100 | INFO     | job.realtimelogging is not enabled
[2025-10-09 01:50:15] 2025-10-09 05:49:33,106 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 01:50:15] 2025-10-09 05:49:52,463 | INFO     | PID=3065534 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 01:50:15] 2025-10-09 05:49:52,464 | INFO     | .. there are 15 such processes running
[2025-10-09 01:50:15] 2025-10-09 05:49:52,464 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 01:50:15] 2025-10-09 05:49:52,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 01:50:15] 2025-10-09 05:49:52,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 01:50:15] 2025-10-09 05:50:08,852 | INFO     | [monitor] cgroup control has ended
[2025-10-09 01:50:15] 2025-10-09 05:50:10,022 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140104269895488)>', '<ExcThread(monitor, started 140103510914816)>']
[2025-10-09 01:50:15] 2025-10-09 05:50:10,551 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 01:50:15] 2025-10-09 05:50:10,552 | INFO     | [monitor] control thread has ended
[2025-10-09 01:50:15] 2025-10-09 05:50:15,047 | INFO     | all workflow threads have been joined
[2025-10-09 01:50:15] 2025-10-09 05:50:15,047 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 01:50:15] 2025-10-09 05:50:15,048 | INFO     | traces error code: 0
[2025-10-09 01:50:15] 2025-10-09 05:50:15,048 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 01:50:15] 2025-10-09 05:50:15,257 [wrapper] ==== pilot stdout END ====
[2025-10-09 01:50:15] 2025-10-09 05:50:15,261 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 01:50:15] 2025-10-09 05:50:15,265 [wrapper] pilotpid: 3065534
[2025-10-09 01:50:15] 2025-10-09 05:50:15,268 [wrapper] Pilot exit status: 0
[2025-10-09 01:50:15] 2025-10-09 05:50:15,280 [wrapper] pandaids: 6832567687
[2025-10-09 01:50:15] 2025-10-09 05:50:15,355 [wrapper] cleanup supervisor_pilot 3160345 3065535
[2025-10-09 01:50:15] 2025-10-09 05:50:15,358 [wrapper] Test setup, not cleaning
[2025-10-09 01:50:15] 2025-10-09 05:50:15,362 [wrapper] apfmon messages muted
[2025-10-09 01:50:15] 2025-10-09 05:50:15,365 [wrapper] ==== wrapper stdout END ====
[2025-10-09 01:50:15] 2025-10-09 05:50:15,369 [wrapper] ==== wrapper stderr END ====
[2025-10-09 01:50:15]  *** Error codes and diagnostics ***
[2025-10-09 01:50:15]     "exeErrorCode": 0,
[2025-10-09 01:50:15]     "exeErrorDiag": "",
[2025-10-09 01:50:15]     "pilotErrorCode": 0,
[2025-10-09 01:50:15]     "pilotErrorDiag": "",
[2025-10-09 01:50:15]  *** Listing of results directory ***
[2025-10-09 01:50:15] total 388824
[2025-10-09 01:50:15] -rw-r--r--. 1 boincer umatlas    552446 Oct  6 05:41 pilot3.tar.gz
[2025-10-09 01:50:15] -rw-r--r--. 1 boincer umatlas      5112 Oct  6 05:49 queuedata.json
[2025-10-09 01:50:15] -rwx------. 1 boincer umatlas     36292 Oct  6 05:50 runpilot2-wrapper.sh
[2025-10-09 01:50:15] -rw-r--r--. 1 boincer umatlas       100 Oct  9 00:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 01:50:15] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 00:58 run_atlas
[2025-10-09 01:50:15] -rw-r--r--. 1 boincer umatlas       105 Oct  9 00:58 job.xml
[2025-10-09 01:50:15] -rw-r--r--. 2 boincer umatlas 214448329 Oct  9 00:58 EVNT.46376901._004048.pool.root.1
[2025-10-09 01:50:15] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 00:58 shared
[2025-10-09 01:50:15] -rw-r--r--. 2 boincer umatlas    565604 Oct  9 00:58 input.tar.gz
[2025-10-09 01:50:15] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 00:58 start_atlas.sh
[2025-10-09 01:50:15] -rw-r--r--. 1 boincer umatlas         0 Oct  9 00:58 boinc_lockfile
[2025-10-09 01:50:15] -rw-r--r--. 1 boincer umatlas      2521 Oct  9 00:58 pandaJob.out
[2025-10-09 01:50:15] -rw-------. 1 boincer umatlas    979290 Oct  9 00:59 agis_schedconf.cvmfs.json
[2025-10-09 01:50:15] -rw-------. 1 boincer umatlas   1560401 Oct  9 00:59 agis_ddmendpoints.agis.ALL.json
[2025-10-09 01:50:15] drwx------. 4 boincer umatlas      4096 Oct  9 00:59 pilot3
[2025-10-09 01:50:15] -rw-------. 1 boincer umatlas 178213769 Oct  9 01:48 HITS.46376905._109192.pool.root.1
[2025-10-09 01:50:15] -rw-r--r--. 1 boincer umatlas       529 Oct  9 01:48 boinc_task_state.xml
[2025-10-09 01:50:15] -rw-------. 1 boincer umatlas        95 Oct  9 01:49 pilot_heartbeat.json
[2025-10-09 01:50:15] -rw-r--r--. 1 boincer umatlas      6841 Oct  9 01:49 init_data.xml
[2025-10-09 01:50:15] -rw-------. 1 boincer umatlas      1041 Oct  9 01:49 memory_monitor_summary.json
[2025-10-09 01:50:15] -rw-------. 1 boincer umatlas    337217 Oct  9 01:49 log.46376905._109192.job.log.tgz.1
[2025-10-09 01:50:15] -rw-------. 1 boincer umatlas      7828 Oct  9 01:49 heartbeat.json
[2025-10-09 01:50:15] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 01:50 boinc_mmap_file
[2025-10-09 01:50:15] -rw-r--r--. 1 boincer umatlas        27 Oct  9 01:50 wrapper_checkpoint.txt
[2025-10-09 01:50:15] -rw-------. 1 boincer umatlas      5082 Oct  9 01:50 pilotlog.txt
[2025-10-09 01:50:15] -rw-------. 1 boincer umatlas    463408 Oct  9 01:50 log.46376905._109192.job.log.1
[2025-10-09 01:50:15] -rw-------. 1 boincer umatlas       357 Oct  9 01:50 output.list
[2025-10-09 01:50:15] -rw-r--r--. 1 boincer umatlas       620 Oct  9 01:50 runtime_log
[2025-10-09 01:50:15] -rw-------. 1 boincer umatlas    819200 Oct  9 01:50 result.tar.gz
[2025-10-09 01:50:15] -rw-r--r--. 1 boincer umatlas      8710 Oct  9 01:50 runtime_log.err
[2025-10-09 01:50:15] -rw-------. 1 boincer umatlas       651 Oct  9 01:50 m78LDma2wP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUwIMDmrog8To.diag
[2025-10-09 01:50:15] -rw-r--r--. 1 boincer umatlas     21852 Oct  9 01:50 stderr.txt
[2025-10-09 01:50:15] HITS file was successfully produced:
[2025-10-09 01:50:15] -rw-------. 1 boincer umatlas 178213769 Oct  9 01:48 shared/HITS.pool.root.1
[2025-10-09 01:50:15]  *** Contents of shared directory: ***
[2025-10-09 01:50:15] total 384840
[2025-10-09 01:50:15] -rw-r--r--. 2 boincer umatlas 214448329 Oct  9 00:58 ATLAS.root_0
[2025-10-09 01:50:15] -rw-r--r--. 2 boincer umatlas    565604 Oct  9 00:58 input.tar.gz
[2025-10-09 01:50:15] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 00:58 start_atlas.sh
[2025-10-09 01:50:15] -rw-------. 1 boincer umatlas 178213769 Oct  9 01:48 HITS.pool.root.1
[2025-10-09 01:50:15] -rw-------. 1 boincer umatlas    819200 Oct  9 01:50 result.tar.gz
01:50:16 (3061751): run_atlas exited; CPU time 28943.195687
01:50:16 (3061751): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN