Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:15 (2830736): wrapper (7.7.26015): starting
00:03:15 (2830736): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 00:03:15] Arguments: --nthreads 8
[2025-10-09 00:03:15] Threads: 8
[2025-10-09 00:03:15] Checking for CVMFS
[2025-10-09 00:03:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 00:03:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 00:03:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 00:03:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 00:03:19] 2.13.2.0 1615359 85858 462860 151495 1 107 36577621 40960001 19139 16776704 0 216965062 99.630 220478162 35321 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-09 00:03:19] CVMFS is ok
[2025-10-09 00:03:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 00:03:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 00:03:19] Further information can be found at the LHC@home message board.
[2025-10-09 00:03:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 00:03:19] Checking for apptainer binary...
[2025-10-09 00:03:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 00:03:19] Running /usr/bin/apptainer --version
[2025-10-09 00:03:19] apptainer version 1.4.3-1.el9
[2025-10-09 00:03:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 00:03:20] c-206-36.aglt2.org
[2025-10-09 00:03:20] apptainer works
[2025-10-09 00:03:20] Set ATHENA_PROC_NUMBER=8
[2025-10-09 00:03:20] Set ATHENA_CORE_NUMBER=8
[2025-10-09 00:03:21] Starting ATLAS job with PandaID=6835975984
[2025-10-09 00:03:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 05:09:17]  *** The last 200 lines of the pilot log: ***
[2025-10-09 05:09:17] 2025-10-09 09:08:25,183 | INFO     | -- intersect: -42851955056.16393
[2025-10-09 05:09:17] 2025-10-09 09:08:25,183 | INFO     | intersect: -42851955056.16393
[2025-10-09 05:09:17] 2025-10-09 09:08:25,183 | INFO     | chi2: 8.9614531181981
[2025-10-09 05:09:17] 2025-10-09 09:08:25,183 | INFO     | sum of square deviations: 7484264279.044956
[2025-10-09 05:09:17] 2025-10-09 09:08:25,185 | INFO     | sum of deviations: 206351937168.9518
[2025-10-09 05:09:17] 2025-10-09 09:08:25,185 | INFO     | mean x: 1759991794.2422144
[2025-10-09 05:09:17] 2025-10-09 09:08:25,186 | INFO     | mean y: 2458664.2006920413
[2025-10-09 05:09:17] 2025-10-09 09:08:25,186 | INFO     | -- intersect: -48523047999.18562
[2025-10-09 05:09:17] 2025-10-09 09:08:25,186 | INFO     | intersect: -48523047999.18562
[2025-10-09 05:09:17] 2025-10-09 09:08:25,186 | INFO     | chi2: 8.336051008726715
[2025-10-09 05:09:17] 2025-10-09 09:08:25,186 | INFO     | current chi2=8.336051008726715 (change=6.978802446685532 %)
[2025-10-09 05:09:17] 2025-10-09 09:08:25,186 | INFO     | right removable region: 288
[2025-10-09 05:09:17] 2025-10-09 09:08:25,186 | INFO     | sum of square deviations: 7484221579.044957
[2025-10-09 05:09:17] 2025-10-09 09:08:25,188 | INFO     | sum of deviations: 93896738669.94821
[2025-10-09 05:09:17] 2025-10-09 09:08:25,188 | INFO     | mean x: 1759992099.2422144
[2025-10-09 05:09:17] 2025-10-09 09:08:25,188 | INFO     | mean y: 2490938.643598616
[2025-10-09 05:09:17] 2025-10-09 09:08:25,188 | INFO     | -- intersect: -22078298153.227177
[2025-10-09 05:09:17] 2025-10-09 09:08:25,189 | INFO     | intersect: -22078298153.227177
[2025-10-09 05:09:17] 2025-10-09 09:08:25,189 | INFO     | chi2: 4.450602055047616
[2025-10-09 05:09:17] 2025-10-09 09:08:25,189 | INFO     | current chi2=4.450602055047616 (change=50.33615646540917 %)
[2025-10-09 05:09:17] 2025-10-09 09:08:25,189 | INFO     | sum of square deviations: 7102407023.746461
[2025-10-09 05:09:17] 2025-10-09 09:08:25,191 | INFO     | sum of deviations: 16892536133.845066
[2025-10-09 05:09:17] 2025-10-09 09:08:25,191 | INFO     | mean x: 1759992251.7464788
[2025-10-09 05:09:17] 2025-10-09 09:08:25,191 | INFO     | mean y: 2521679.5950704226
[2025-10-09 05:09:17] 2025-10-09 09:08:25,191 | INFO     | -- intersect: -4183486332.6903224
[2025-10-09 05:09:17] 2025-10-09 09:08:25,191 | INFO     | intersect: -4183486332.6903224
[2025-10-09 05:09:17] 2025-10-09 09:08:25,192 | INFO     | chi2: 1.8418321324242495
[2025-10-09 05:09:17] 2025-10-09 09:08:25,192 | INFO     | current chi2=1.8418321324242495 (change=58.61611283948989 %)
[2025-10-09 05:09:17] 2025-10-09 09:08:25,192 | INFO     | sum of square deviations: 6733802018.437277
[2025-10-09 05:09:17] 2025-10-09 09:08:25,194 | INFO     | sum of deviations: -21208277976.577053
[2025-10-09 05:09:17] 2025-10-09 09:08:25,194 | INFO     | mean x: 1759992404.250896
[2025-10-09 05:09:17] 2025-10-09 09:08:25,194 | INFO     | mean y: 2537382.308243728
[2025-10-09 05:09:17] 2025-10-09 09:08:25,194 | INFO     | -- intersect: 5545677504.904181
[2025-10-09 05:09:17] 2025-10-09 09:08:25,194 | INFO     | intersect: 5545677504.904181
[2025-10-09 05:09:17] 2025-10-09 09:08:25,194 | INFO     | chi2: 1.1045628810756107
[2025-10-09 05:09:17] 2025-10-09 09:08:25,194 | INFO     | current chi2=1.1045628810756107 (change=40.02912308725079 %)
[2025-10-09 05:09:17] 2025-10-09 09:08:25,195 | INFO     | sum of square deviations: 6378174000.616751
[2025-10-09 05:09:17] 2025-10-09 09:08:25,196 | INFO     | sum of deviations: -38108611134.36861
[2025-10-09 05:09:17] 2025-10-09 09:08:25,196 | INFO     | mean x: 1759992556.7554746
[2025-10-09 05:09:17] 2025-10-09 09:08:25,196 | INFO     | mean y: 2544616.4124087594
[2025-10-09 05:09:17] 2025-10-09 09:08:25,196 | INFO     | -- intersect: 10518230130.525381
[2025-10-09 05:09:17] 2025-10-09 09:08:25,196 | INFO     | intersect: 10518230130.525381
[2025-10-09 05:09:17] 2025-10-09 09:08:25,197 | INFO     | chi2: 0.9572812008556962
[2025-10-09 05:09:17] 2025-10-09 09:08:25,197 | INFO     | current chi2=0.9572812008556962 (change=13.333933517346996 %)
[2025-10-09 05:09:17] 2025-10-09 09:08:25,197 | INFO     | left removable region: 40
[2025-10-09 05:09:17] 2025-10-09 09:08:25,197 | INFO     | sum of square deviations: 4729283086.5
[2025-10-09 05:09:17] 2025-10-09 09:08:25,199 | INFO     | sum of deviations: -23427432890.49999
[2025-10-09 05:09:17] 2025-10-09 09:08:25,199 | INFO     | mean x: 1759992983.75
[2025-10-09 05:09:17] 2025-10-09 09:08:25,199 | INFO     | mean y: 2552998.9112903224
[2025-10-09 05:09:17] 2025-10-09 09:08:25,199 | INFO     | -- intersect: 8721024014.582424
[2025-10-09 05:09:17] 2025-10-09 09:08:25,199 | INFO     | intersect: 8721024014.582424
[2025-10-09 05:09:17] 2025-10-09 09:08:25,199 | INFO     | chi2: 0.1936524379026786
[2025-10-09 05:09:17] 2025-10-09 09:08:25,199 | INFO     | -- intersect: 8721024014.582424
[2025-10-09 05:09:17] 2025-10-09 09:08:25,199 | INFO     | current memory leak: -4.95 B/s (using 248 data points, chi2=0.19)
[2025-10-09 05:09:17] 2025-10-09 09:08:25,200 | INFO     | could have reported an average CPU frequency of 3228 MHz (13 samples)
[2025-10-09 05:09:17] 2025-10-09 09:08:25,200 | INFO     | ..............................
[2025-10-09 05:09:17] 2025-10-09 09:08:25,200 | INFO     | . Timing measurements:
[2025-10-09 05:09:17] 2025-10-09 09:08:25,200 | INFO     | . get job = 0 s
[2025-10-09 05:09:17] 2025-10-09 09:08:25,200 | INFO     | . initial setup = 13 s
[2025-10-09 05:09:17] 2025-10-09 09:08:25,200 | INFO     | . payload setup = 92 s
[2025-10-09 05:09:17] 2025-10-09 09:08:25,200 | INFO     | . stage-in = 0 s
[2025-10-09 05:09:17] 2025-10-09 09:08:25,200 | INFO     | . payload execution = 17934 s
[2025-10-09 05:09:17] 2025-10-09 09:08:25,202 | INFO     | . stage-out = 2 s
[2025-10-09 05:09:17] 2025-10-09 09:08:25,203 | INFO     | . log creation = 0 s
[2025-10-09 05:09:17] 2025-10-09 09:08:25,203 | INFO     | ..............................
[2025-10-09 05:09:17] 2025-10-09 09:08:25,637 | INFO     | 
[2025-10-09 05:09:17] 2025-10-09 09:08:25,637 | INFO     | job summary report
[2025-10-09 05:09:17] 2025-10-09 09:08:25,637 | INFO     | --------------------------------------------------
[2025-10-09 05:09:17] 2025-10-09 09:08:25,637 | INFO     | PanDA job id: 6835975984
[2025-10-09 05:09:17] 2025-10-09 09:08:25,637 | INFO     | task id: 46676269
[2025-10-09 05:09:17] 2025-10-09 09:08:25,637 | INFO     | errors: (none)
[2025-10-09 05:09:17] 2025-10-09 09:08:25,637 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 05:09:17] 2025-10-09 09:08:25,637 | INFO     | pilot state: finished 
[2025-10-09 05:09:17] 2025-10-09 09:08:25,638 | INFO     | transexitcode: 0
[2025-10-09 05:09:17] 2025-10-09 09:08:25,638 | INFO     | exeerrorcode: 0
[2025-10-09 05:09:17] 2025-10-09 09:08:25,638 | INFO     | exeerrordiag: 
[2025-10-09 05:09:17] 2025-10-09 09:08:25,638 | INFO     | exitcode: 0
[2025-10-09 05:09:17] 2025-10-09 09:08:25,638 | INFO     | exitmsg: OK
[2025-10-09 05:09:17] 2025-10-09 09:08:25,638 | INFO     | cpuconsumptiontime: 32395 s
[2025-10-09 05:09:17] 2025-10-09 09:08:25,638 | INFO     | nevents: 400
[2025-10-09 05:09:17] 2025-10-09 09:08:25,638 | INFO     | neventsw: 0
[2025-10-09 05:09:17] 2025-10-09 09:08:25,638 | INFO     | pid: 2844883
[2025-10-09 05:09:17] 2025-10-09 09:08:25,638 | INFO     | pgrp: 2844883
[2025-10-09 05:09:17] 2025-10-09 09:08:25,638 | INFO     | corecount: 8
[2025-10-09 05:09:17] 2025-10-09 09:08:25,638 | INFO     | event service: False
[2025-10-09 05:09:17] 2025-10-09 09:08:25,638 | INFO     | sizes: {0: 2348018, 1: 2348703, 2: 2348874, 3: 2348902, 14: 2348930, 25: 2348958, 37: 2349114, 48: 2349142, 59: 2349432, 60: 2349432, 71: 2349460, 18030: 2382121, 
[2025-10-09 05:09:17] 2025-10-09 09:08:25,638 | INFO     | --------------------------------------------------
[2025-10-09 05:09:17] 2025-10-09 09:08:25,639 | INFO     | 
[2025-10-09 05:09:17] 2025-10-09 09:08:25,639 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-09 05:09:17] 2025-10-09 09:08:25,665 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,665 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,665 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,665 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,665 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,665 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,665 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,666 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,666 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,666 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,666 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,666 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,666 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,666 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,666 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,666 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,666 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,666 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 05:09:17] 2025-10-09 09:08:25,666 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,666 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 05:09:17] 2025-10-09 09:08:25,667 | INFO     | job 6835975984 has completed (purged errors)
[2025-10-09 05:09:17] 2025-10-09 09:08:25,667 | INFO     | overall cleanup function is called
[2025-10-09 05:09:17] 2025-10-09 09:08:26,675 | INFO     | --- collectZombieJob: --- 10, [2844883]
[2025-10-09 05:09:17] 2025-10-09 09:08:26,675 | INFO     | zombie collector waiting for pid 2844883
[2025-10-09 05:09:17] 2025-10-09 09:08:26,675 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 05:09:17] 2025-10-09 09:08:26,675 | INFO     | collected zombie processes
[2025-10-09 05:09:17] 2025-10-09 09:08:26,675 | INFO     | will attempt to kill all subprocesses of pid=2844883
[2025-10-09 05:09:17] 2025-10-09 09:08:26,936 | INFO     | process IDs to be killed: [2844883] (in reverse order)
[2025-10-09 05:09:17] 2025-10-09 09:08:27,031 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 05:09:17] 2025-10-09 09:08:27,032 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 05:09:17] 2025-10-09 09:08:27,044 | INFO     | did not find any defunct processes belonging to 2844883
[2025-10-09 05:09:17] 2025-10-09 09:08:27,056 | INFO     | did not find any defunct processes belonging to 2844883
[2025-10-09 05:09:17] 2025-10-09 09:08:27,057 | INFO     | ready for new job
[2025-10-09 05:09:17] 2025-10-09 09:08:27,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 05:09:17] 2025-10-09 09:08:27,059 | INFO     | ***************************************
[2025-10-09 05:09:17] 2025-10-09 09:08:27,062 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 05:09:17] 2025-10-09 09:08:27,062 | INFO     | ***************************************
[2025-10-09 05:09:17] 2025-10-09 09:08:27,062 | INFO     | 
[2025-10-09 05:09:17] 2025-10-09 09:08:27,066 | INFO     | architecture information:
[2025-10-09 05:09:17] 2025-10-09 09:08:27,066 | INFO     | executing command: cat /etc/os-release
[2025-10-09 05:09:17] 2025-10-09 09:08:27,085 | INFO     | cat /etc/os-release:
[2025-10-09 05:09:17] NAME="CentOS Linux"
[2025-10-09 05:09:17] VERSION="7 (Core)"
[2025-10-09 05:09:17] ID="centos"
[2025-10-09 05:09:17] ID_LIKE="rhel fedora"
[2025-10-09 05:09:17] VERSION_ID="7"
[2025-10-09 05:09:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 05:09:17] ANSI_COLOR="0;31"
[2025-10-09 05:09:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 05:09:17] HOME_URL="https://www.centos.org/"
[2025-10-09 05:09:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 05:09:17] 
[2025-10-09 05:09:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 05:09:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 05:09:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 05:09:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 05:09:17] 
[2025-10-09 05:09:17] 2025-10-09 09:08:27,086 | INFO     | ***************************************
[2025-10-09 05:09:17] 2025-10-09 09:08:27,588 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-09 05:09:17] 2025-10-09 09:08:27,611 | INFO     | sufficient remaining disk space (86489694208 B)
[2025-10-09 05:09:17] 2025-10-09 09:08:27,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 05:09:17] 2025-10-09 09:08:27,612 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 05:09:17] 2025-10-09 09:08:27,612 | INFO     | update_server=False
[2025-10-09 05:09:17] 2025-10-09 09:08:27,612 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 05:09:17] 2025-10-09 09:08:28,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 05:09:17] 2025-10-09 09:08:28,104 | INFO     | aborting loop
[2025-10-09 05:09:17] 2025-10-09 09:08:28,251 | INFO     | all data control threads have been joined
[2025-10-09 05:09:17] 2025-10-09 09:08:28,617 | INFO     | [job] retrieve thread has finished
[2025-10-09 05:09:17] 2025-10-09 09:08:28,624 | INFO     | [payload] validate_post thread has finished
[2025-10-09 05:09:17] 2025-10-09 09:08:28,727 | INFO     | all payload control threads have been joined
[2025-10-09 05:09:17] 2025-10-09 09:08:28,759 | INFO     | all job control threads have been joined
[2025-10-09 05:09:17] 2025-10-09 09:08:28,887 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 05:09:17] 2025-10-09 09:08:29,017 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 05:09:17] 2025-10-09 09:08:29,064 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 05:09:17] 2025-10-09 09:08:29,111 | INFO     | [job] job monitor thread has finished
[2025-10-09 05:09:17] 2025-10-09 09:08:29,144 | INFO     | [job] validate thread has finished
[2025-10-09 05:09:17] 2025-10-09 09:08:29,257 | INFO     | [data] control thread has finished
[2025-10-09 05:09:17] 2025-10-09 09:08:29,277 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 05:09:17] 2025-10-09 09:08:29,368 | INFO     | [data] copytool_in thread has finished
[2025-10-09 05:09:17] 2025-10-09 09:08:29,439 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 05:09:17] 2025-10-09 09:08:29,591 | INFO     | [payload] failed_post thread has finished
[2025-10-09 05:09:17] 2025-10-09 09:08:29,732 | INFO     | [payload] control thread has finished
[2025-10-09 05:09:17] 2025-10-09 09:08:29,764 | INFO     | [job] control thread has finished
[2025-10-09 05:09:17] 2025-10-09 09:08:30,291 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 05:09:17] 2025-10-09 09:08:30,376 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 05:09:17] 2025-10-09 09:08:31,066 | INFO     | [data] copytool_out thread has finished
[2025-10-09 05:09:17] 2025-10-09 09:08:31,296 | INFO     | [job] queue monitor thread has finished
[2025-10-09 05:09:17] 2025-10-09 09:08:34,383 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 05:09:17] 2025-10-09 09:08:58,541 | INFO     | PID=2836193 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 05:09:17] 2025-10-09 09:08:58,542 | INFO     | .. there are 16 such processes running
[2025-10-09 05:09:17] 2025-10-09 09:08:58,542 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 05:09:17] 2025-10-09 09:08:58,542 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 05:09:17] 2025-10-09 09:08:58,542 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 05:09:17] 2025-10-09 09:09:10,889 | INFO     | [monitor] cgroup control has ended
[2025-10-09 05:09:17] 2025-10-09 09:09:12,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140377290422080)>', '<ExcThread(monitor, started 140376492988160)>']
[2025-10-09 05:09:17] 2025-10-09 09:09:12,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 05:09:17] 2025-10-09 09:09:12,605 | INFO     | [monitor] control thread has ended
[2025-10-09 05:09:17] 2025-10-09 09:09:17,463 | INFO     | all workflow threads have been joined
[2025-10-09 05:09:17] 2025-10-09 09:09:17,463 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 05:09:17] 2025-10-09 09:09:17,463 | INFO     | traces error code: 0
[2025-10-09 05:09:17] 2025-10-09 09:09:17,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 05:09:17] 2025-10-09 09:09:17,616 [wrapper] ==== pilot stdout END ====
[2025-10-09 05:09:17] 2025-10-09 09:09:17,620 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 05:09:17] 2025-10-09 09:09:17,623 [wrapper] pilotpid: 2836193
[2025-10-09 05:09:17] 2025-10-09 09:09:17,626 [wrapper] Pilot exit status: 0
[2025-10-09 05:09:17] 2025-10-09 09:09:17,641 [wrapper] pandaids: 6835975984
[2025-10-09 05:09:17] 2025-10-09 09:09:17,710 [wrapper] cleanup supervisor_pilot 3411625 2836194
[2025-10-09 05:09:17] 2025-10-09 09:09:17,714 [wrapper] Test setup, not cleaning
[2025-10-09 05:09:17] 2025-10-09 09:09:17,718 [wrapper] apfmon messages muted
[2025-10-09 05:09:17] 2025-10-09 09:09:17,722 [wrapper] ==== wrapper stdout END ====
[2025-10-09 05:09:17] 2025-10-09 09:09:17,726 [wrapper] ==== wrapper stderr END ====
[2025-10-09 05:09:17]  *** Error codes and diagnostics ***
[2025-10-09 05:09:17]     "exeErrorCode": 0,
[2025-10-09 05:09:17]     "exeErrorDiag": "",
[2025-10-09 05:09:17]     "pilotErrorCode": 0,
[2025-10-09 05:09:17]     "pilotErrorDiag": "",
[2025-10-09 05:09:17]  *** Listing of results directory ***
[2025-10-09 05:09:17] total 413096
[2025-10-09 05:09:17] -rw-r--r--. 1 boincer umatlas    557409 Oct  8 05:48 pilot3.tar.gz
[2025-10-09 05:09:17] -rwx------. 1 boincer umatlas     36292 Oct  8 05:49 runpilot2-wrapper.sh
[2025-10-09 05:09:17] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 05:49 queuedata.json
[2025-10-09 05:09:17] -rw-r--r--. 1 boincer umatlas       100 Oct  9 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 05:09:17] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 00:03 run_atlas
[2025-10-09 05:09:17] -rw-r--r--. 1 boincer umatlas       105 Oct  9 00:03 job.xml
[2025-10-09 05:09:17] -rw-r--r--. 2 boincer umatlas 219440391 Oct  9 00:03 EVNT.46676267._000133.pool.root.1
[2025-10-09 05:09:17] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 00:03 start_atlas.sh
[2025-10-09 05:09:17] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 00:03 shared
[2025-10-09 05:09:17] -rw-r--r--. 2 boincer umatlas    569676 Oct  9 00:03 input.tar.gz
[2025-10-09 05:09:17] -rw-r--r--. 1 boincer umatlas         0 Oct  9 00:03 boinc_lockfile
[2025-10-09 05:09:17] -rw-r--r--. 1 boincer umatlas      2545 Oct  9 00:03 pandaJob.out
[2025-10-09 05:09:17] -rw-------. 1 boincer umatlas    979306 Oct  9 00:05 agis_schedconf.cvmfs.json
[2025-10-09 05:09:17] drwx------. 5 boincer umatlas      4096 Oct  9 00:05 pilot3
[2025-10-09 05:09:17] -rw-------. 1 boincer umatlas 194132271 Oct  9 05:07 HITS.46676269._003306.pool.root.1
[2025-10-09 05:09:17] -rw-r--r--. 1 boincer umatlas       531 Oct  9 05:07 boinc_task_state.xml
[2025-10-09 05:09:17] -rw-------. 1 boincer umatlas      1041 Oct  9 05:08 memory_monitor_summary.json
[2025-10-09 05:09:17] -rw-------. 1 boincer umatlas   1560401 Oct  9 05:08 agis_ddmendpoints.agis.ALL.json
[2025-10-09 05:09:17] -rw-------. 1 boincer umatlas    487749 Oct  9 05:08 log.46676269._003306.job.log.tgz.1
[2025-10-09 05:09:17] -rw-------. 1 boincer umatlas      7784 Oct  9 05:08 heartbeat.json
[2025-10-09 05:09:17] -rw-------. 1 boincer umatlas        95 Oct  9 05:08 pilot_heartbeat.json
[2025-10-09 05:09:17] -rw-r--r--. 1 boincer umatlas      6901 Oct  9 05:09 init_data.xml
[2025-10-09 05:09:17] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 05:09 boinc_mmap_file
[2025-10-09 05:09:17] -rw-r--r--. 1 boincer umatlas        28 Oct  9 05:09 wrapper_checkpoint.txt
[2025-10-09 05:09:17] -rw-------. 1 boincer umatlas      4824 Oct  9 05:09 pilotlog.txt
[2025-10-09 05:09:17] -rw-------. 1 boincer umatlas   2279173 Oct  9 05:09 log.46676269._003306.job.log.1
[2025-10-09 05:09:17] -rw-------. 1 boincer umatlas       357 Oct  9 05:09 output.list
[2025-10-09 05:09:17] -rw-r--r--. 1 boincer umatlas       620 Oct  9 05:09 runtime_log
[2025-10-09 05:09:17] -rw-------. 1 boincer umatlas   2785280 Oct  9 05:09 result.tar.gz
[2025-10-09 05:09:17] -rw-r--r--. 1 boincer umatlas      8704 Oct  9 05:09 runtime_log.err
[2025-10-09 05:09:17] -rw-------. 1 boincer umatlas       656 Oct  9 05:09 O69LDmqyfQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBeXNDmFTUz4n.diag
[2025-10-09 05:09:17] -rw-r--r--. 1 boincer umatlas     21015 Oct  9 05:09 stderr.txt
[2025-10-09 05:09:17] HITS file was successfully produced:
[2025-10-09 05:09:17] -rw-------. 1 boincer umatlas 194132271 Oct  9 05:07 shared/HITS.pool.root.1
[2025-10-09 05:09:17]  *** Contents of shared directory: ***
[2025-10-09 05:09:17] total 407184
[2025-10-09 05:09:17] -rw-r--r--. 2 boincer umatlas 219440391 Oct  9 00:03 ATLAS.root_0
[2025-10-09 05:09:17] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 00:03 start_atlas.sh
[2025-10-09 05:09:17] -rw-r--r--. 2 boincer umatlas    569676 Oct  9 00:03 input.tar.gz
[2025-10-09 05:09:17] -rw-------. 1 boincer umatlas 194132271 Oct  9 05:07 HITS.pool.root.1
[2025-10-09 05:09:17] -rw-------. 1 boincer umatlas   2785280 Oct  9 05:09 result.tar.gz
05:09:19 (2830736): run_atlas exited; CPU time 32686.272687
05:09:19 (2830736): called boinc_finish(0)

</stderr_txt>
]]>

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