Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:44:45 (20618): wrapper (7.7.26015): starting
23:44:45 (20618): wrapper: running run_atlas (--nthreads 12)
[2025-10-08 23:44:45] Arguments: --nthreads 12
[2025-10-08 23:44:45] Threads: 12
[2025-10-08 23:44:45] Checking for CVMFS
[2025-10-08 23:44:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 23:44:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 23:44:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 23:44:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 23:44:45] 2.11.2.0 2998 33751 88236 151495 0 57 20188335 20275201 1 130560 0 19097028 99.990 1092224 45056 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 23:44:45] CVMFS is ok
[2025-10-08 23:44:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 23:44:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 23:44:45] Further information can be found at the LHC@home message board.
[2025-10-08 23:44:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 23:44:45] Checking for apptainer binary...
[2025-10-08 23:44:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 23:44:45] Running /usr/bin/apptainer --version
[2025-10-08 23:44:45] apptainer version 1.3.2-1.el7
[2025-10-08 23:44:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 23:44:47] c-205-12.aglt2.org
[2025-10-08 23:44:47] apptainer works
[2025-10-08 23:44:47] Set ATHENA_PROC_NUMBER=12
[2025-10-08 23:44:47] Set ATHENA_CORE_NUMBER=12
[2025-10-08 23:44:47] Starting ATLAS job with PandaID=6835982229
[2025-10-08 23:44:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 01:01:37]  *** The last 200 lines of the pilot log: ***
[2025-10-09 01:01:37]  status=None
[2025-10-09 01:01:37]  status_code=0
[2025-10-09 01:01:37]  storage_token=
[2025-10-09 01:01:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6835982229/log.46676269._004716.job.log.tgz.1
[2025-10-09 01:01:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/c1/log.46676269._004716.job.log.tgz.1
[2025-10-09 01:01:37]  workdir=None
[2025-10-09 01:01:37] ]
[2025-10-09 01:01:37] 2025-10-09 05:00:57,003 | INFO     | transferring file log.46676269._004716.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6835982229/log.46676269._004716.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-09 01:01:37] 2025-10-09 05:00:57,004 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6835982229/log.46676269._004716.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._004716.job
[2025-10-09 01:01:37] 2025-10-09 05:00:57,027 | INFO     | adding to output.list: log.46676269._004716.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/c1/log.46676269._004716.job.log.tg
[2025-10-09 01:01:37] 2025-10-09 05:00:57,028 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-09 01:01:37] 2025-10-09 05:00:57,028 | INFO     | summary of transferred files:
[2025-10-09 01:01:37] 2025-10-09 05:00:57,029 | INFO     |  -- lfn=log.46676269._004716.job.log.tgz.1, status_code=0, status=transferred
[2025-10-09 01:01:37] 2025-10-09 05:00:57,029 | INFO     | stage-out finished correctly
[2025-10-09 01:01:37] 2025-10-09 05:00:57,621 | INFO     | monitor loop #344: job 0:6835982229 is in state 'finished'
[2025-10-09 01:01:37] 2025-10-09 05:00:57,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 01:01:37] 2025-10-09 05:00:58,418 | INFO     | time since job start (4556s) is within the limit (172800.0s)
[2025-10-09 01:01:37] 2025-10-09 05:00:59,779 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 01:01:37] 2025-10-09 05:01:00,124 | INFO     | monitor loop #345: job 0:6835982229 is in state 'finished'
[2025-10-09 01:01:37] 2025-10-09 05:01:00,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 01:01:37] 2025-10-09 05:01:00,423 | INFO     | time since job start (4558s) is within the limit (172800.0s)
[2025-10-09 01:01:37] 2025-10-09 05:01:01,261 | INFO     | job 6835982229 has state=finished
[2025-10-09 01:01:37] 2025-10-09 05:01:01,261 | INFO     | preparing for final server update for job 6835982229 in state='finished'
[2025-10-09 01:01:37] 2025-10-09 05:01:01,262 | INFO     | this job has now completed (state=finished)
[2025-10-09 01:01:37] 2025-10-09 05:01:01,262 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 01:01:37] 2025-10-09 05:01:01,262 | INFO     | log transfer has been attempted: DONE
[2025-10-09 01:01:37] 2025-10-09 05:01:01,262 | INFO     | job 6835982229 has finished - writing final server update
[2025-10-09 01:01:37] 2025-10-09 05:01:01,263 | INFO     | total number of processed events: 400 (read)
[2025-10-09 01:01:37] 2025-10-09 05:01:01,265 | INFO     | executing command: lscpu
[2025-10-09 01:01:37] 2025-10-09 05:01:01,296 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 01:01:37] 2025-10-09 05:01:02,429 | INFO     | time since job start (4560s) is within the limit (172800.0s)
[2025-10-09 01:01:37] 2025-10-09 05:01:02,642 | INFO     | monitor loop #346: job 0:6835982229 is in state 'finished'
[2025-10-09 01:01:37] 2025-10-09 05:01:02,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 01:01:37] 2025-10-09 05:01:04,435 | INFO     | time since job start (4562s) is within the limit (172800.0s)
[2025-10-09 01:01:37] 2025-10-09 05:01:05,145 | INFO     | monitor loop #347: job 0:6835982229 is in state 'finished'
[2025-10-09 01:01:37] 2025-10-09 05:01:05,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 01:01:37] 2025-10-09 05:01:06,075 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-09 01:01:37] 2025-10-09 05:01:06,079 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-09 01:01:37] 2025-10-09 05:01:06,081 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6835982229/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 01:01:37] 2025-10-09 05:01:06,082 | INFO     | extracted standard info from prmon json
[2025-10-09 01:01:37] 2025-10-09 05:01:06,082 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 01:01:37] 2025-10-09 05:01:06,082 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 01:01:37] 2025-10-09 05:01:06,082 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 01:01:37] 2025-10-09 05:01:06,082 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 01:01:37] 2025-10-09 05:01:06,084 | INFO     | fitting pss+swap vs Time
[2025-10-09 01:01:37] 2025-10-09 05:01:06,084 | INFO     | sum of square deviations: 97479037.0
[2025-10-09 01:01:37] 2025-10-09 05:01:06,084 | INFO     | sum of deviations: -7693320000.0
[2025-10-09 01:01:37] 2025-10-09 05:01:06,085 | INFO     | mean x: 1759983880.5
[2025-10-09 01:01:37] 2025-10-09 05:01:06,085 | INFO     | mean y: 2785875.0
[2025-10-09 01:01:37] 2025-10-09 05:01:06,085 | INFO     | -- intersect: 138905668014.96472
[2025-10-09 01:01:37] 2025-10-09 05:01:06,085 | INFO     | intersect: 138905668014.96472
[2025-10-09 01:01:37] 2025-10-09 05:01:06,085 | INFO     | chi2: 0.056712057679843025
[2025-10-09 01:01:37] 2025-10-09 05:01:06,085 | INFO     | -- intersect: 138905668014.96472
[2025-10-09 01:01:37] 2025-10-09 05:01:06,085 | INFO     | current memory leak: -78.92 B/s (using 68 data points, chi2=0.06)
[2025-10-09 01:01:37] 2025-10-09 05:01:06,086 | INFO     | could have reported an average CPU frequency of 2032 MHz (6 samples)
[2025-10-09 01:01:37] 2025-10-09 05:01:06,086 | INFO     | ..............................
[2025-10-09 01:01:37] 2025-10-09 05:01:06,086 | INFO     | . Timing measurements:
[2025-10-09 01:01:37] 2025-10-09 05:01:06,086 | INFO     | . get job = 0 s
[2025-10-09 01:01:37] 2025-10-09 05:01:06,086 | INFO     | . initial setup = 2 s
[2025-10-09 01:01:37] 2025-10-09 05:01:06,086 | INFO     | . payload setup = 7 s
[2025-10-09 01:01:37] 2025-10-09 05:01:06,086 | INFO     | . stage-in = 0 s
[2025-10-09 01:01:37] 2025-10-09 05:01:06,086 | INFO     | . payload execution = 4525 s
[2025-10-09 01:01:37] 2025-10-09 05:01:06,087 | INFO     | . stage-out = 0 s
[2025-10-09 01:01:37] 2025-10-09 05:01:06,087 | INFO     | . log creation = 0 s
[2025-10-09 01:01:37] 2025-10-09 05:01:06,087 | INFO     | ..............................
[2025-10-09 01:01:37] 2025-10-09 05:01:06,353 | INFO     | 
[2025-10-09 01:01:37] 2025-10-09 05:01:06,353 | INFO     | job summary report
[2025-10-09 01:01:37] 2025-10-09 05:01:06,354 | INFO     | --------------------------------------------------
[2025-10-09 01:01:37] 2025-10-09 05:01:06,354 | INFO     | PanDA job id: 6835982229
[2025-10-09 01:01:37] 2025-10-09 05:01:06,354 | INFO     | task id: 46676269
[2025-10-09 01:01:37] 2025-10-09 05:01:06,354 | INFO     | errors: (none)
[2025-10-09 01:01:37] 2025-10-09 05:01:06,354 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 01:01:37] 2025-10-09 05:01:06,354 | INFO     | pilot state: finished 
[2025-10-09 01:01:37] 2025-10-09 05:01:06,355 | INFO     | transexitcode: 0
[2025-10-09 01:01:37] 2025-10-09 05:01:06,355 | INFO     | exeerrorcode: 0
[2025-10-09 01:01:37] 2025-10-09 05:01:06,355 | INFO     | exeerrordiag: 
[2025-10-09 01:01:37] 2025-10-09 05:01:06,355 | INFO     | exitcode: 0
[2025-10-09 01:01:37] 2025-10-09 05:01:06,355 | INFO     | exitmsg: OK
[2025-10-09 01:01:37] 2025-10-09 05:01:06,355 | INFO     | cpuconsumptiontime: 48498 s
[2025-10-09 01:01:37] 2025-10-09 05:01:06,356 | INFO     | nevents: 400
[2025-10-09 01:01:37] 2025-10-09 05:01:06,356 | INFO     | neventsw: 0
[2025-10-09 01:01:37] 2025-10-09 05:01:06,356 | INFO     | pid: 30789
[2025-10-09 01:01:37] 2025-10-09 05:01:06,356 | INFO     | pgrp: 30789
[2025-10-09 01:01:37] 2025-10-09 05:01:06,356 | INFO     | corecount: 12
[2025-10-09 01:01:37] 2025-10-09 05:01:06,356 | INFO     | event service: False
[2025-10-09 01:01:37] 2025-10-09 05:01:06,357 | INFO     | sizes: {0: 2348680, 1: 2348879, 5: 2349141, 11: 2349197, 4537: 2375299, 4538: 2384297, 4541: 2384481, 4547: 2384675}
[2025-10-09 01:01:37] 2025-10-09 05:01:06,357 | INFO     | --------------------------------------------------
[2025-10-09 01:01:37] 2025-10-09 05:01:06,357 | INFO     | 
[2025-10-09 01:01:37] 2025-10-09 05:01:06,357 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-09 01:01:37] 2025-10-09 05:01:06,382 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,382 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,382 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,382 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,384 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,384 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,384 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,384 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,385 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,385 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 01:01:37] 2025-10-09 05:01:06,385 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,385 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 01:01:37] 2025-10-09 05:01:06,385 | INFO     | job 6835982229 has completed (purged errors)
[2025-10-09 01:01:37] 2025-10-09 05:01:06,386 | INFO     | overall cleanup function is called
[2025-10-09 01:01:37] 2025-10-09 05:01:07,394 | INFO     | --- collectZombieJob: --- 10, [30789]
[2025-10-09 01:01:37] 2025-10-09 05:01:07,394 | INFO     | zombie collector waiting for pid 30789
[2025-10-09 01:01:37] 2025-10-09 05:01:07,394 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 01:01:37] 2025-10-09 05:01:07,394 | INFO     | collected zombie processes
[2025-10-09 01:01:37] 2025-10-09 05:01:07,395 | INFO     | will attempt to kill all subprocesses of pid=30789
[2025-10-09 01:01:37] 2025-10-09 05:01:07,487 | INFO     | process IDs to be killed: [30789] (in reverse order)
[2025-10-09 01:01:37] 2025-10-09 05:01:07,542 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 01:01:37] 2025-10-09 05:01:07,542 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 01:01:37] 2025-10-09 05:01:07,546 | INFO     | did not find any defunct processes belonging to 30789
[2025-10-09 01:01:37] 2025-10-09 05:01:07,549 | INFO     | did not find any defunct processes belonging to 30789
[2025-10-09 01:01:37] 2025-10-09 05:01:07,550 | INFO     | ready for new job
[2025-10-09 01:01:37] 2025-10-09 05:01:07,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 01:01:37] 2025-10-09 05:01:07,551 | INFO     | ***************************************
[2025-10-09 01:01:37] 2025-10-09 05:01:07,551 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 01:01:37] 2025-10-09 05:01:07,551 | INFO     | ***************************************
[2025-10-09 01:01:37] 2025-10-09 05:01:07,551 | INFO     | 
[2025-10-09 01:01:37] 2025-10-09 05:01:07,552 | INFO     | architecture information:
[2025-10-09 01:01:37] 2025-10-09 05:01:07,553 | INFO     | executing command: cat /etc/os-release
[2025-10-09 01:01:37] 2025-10-09 05:01:07,568 | INFO     | cat /etc/os-release:
[2025-10-09 01:01:37] NAME="CentOS Linux"
[2025-10-09 01:01:37] VERSION="7 (Core)"
[2025-10-09 01:01:37] ID="centos"
[2025-10-09 01:01:37] ID_LIKE="rhel fedora"
[2025-10-09 01:01:37] VERSION_ID="7"
[2025-10-09 01:01:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 01:01:37] ANSI_COLOR="0;31"
[2025-10-09 01:01:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 01:01:37] HOME_URL="https://www.centos.org/"
[2025-10-09 01:01:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 01:01:37] 
[2025-10-09 01:01:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 01:01:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 01:01:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 01:01:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 01:01:37] 
[2025-10-09 01:01:37] 2025-10-09 05:01:07,568 | INFO     | ***************************************
[2025-10-09 01:01:37] 2025-10-09 05:01:08,071 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-09 01:01:37] 2025-10-09 05:01:08,089 | INFO     | sufficient remaining disk space (29361176576 B)
[2025-10-09 01:01:37] 2025-10-09 05:01:08,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 01:01:37] 2025-10-09 05:01:08,090 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 01:01:37] 2025-10-09 05:01:08,090 | INFO     | update_server=False
[2025-10-09 01:01:37] 2025-10-09 05:01:08,090 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 01:01:37] 2025-10-09 05:01:08,090 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 01:01:37] 2025-10-09 05:01:08,091 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 01:01:37] 2025-10-09 05:01:08,125 | INFO     | all data control threads have been joined
[2025-10-09 01:01:37] 2025-10-09 05:01:08,159 | INFO     | all job control threads have been joined
[2025-10-09 01:01:37] 2025-10-09 05:01:08,305 | INFO     | all payload control threads have been joined
[2025-10-09 01:01:37] 2025-10-09 05:01:08,660 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 01:01:37] 2025-10-09 05:01:08,660 | INFO     | aborting loop
[2025-10-09 01:01:37] 2025-10-09 05:01:09,096 | INFO     | [job] retrieve thread has finished
[2025-10-09 01:01:37] 2025-10-09 05:01:09,096 | INFO     | [job] queue monitor thread has finished
[2025-10-09 01:01:37] 2025-10-09 05:01:09,131 | INFO     | [data] control thread has finished
[2025-10-09 01:01:37] 2025-10-09 05:01:09,162 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 01:01:37] 2025-10-09 05:01:09,164 | INFO     | [job] control thread has finished
[2025-10-09 01:01:37] 2025-10-09 05:01:09,166 | INFO     | [job] validate thread has finished
[2025-10-09 01:01:37] 2025-10-09 05:01:09,311 | INFO     | [payload] control thread has finished
[2025-10-09 01:01:37] 2025-10-09 05:01:09,427 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 01:01:37] 2025-10-09 05:01:09,435 | INFO     | [monitor] cgroup control has ended
[2025-10-09 01:01:37] 2025-10-09 05:01:09,492 | INFO     | [payload] failed_post thread has finished
[2025-10-09 01:01:37] 2025-10-09 05:01:09,665 | INFO     | [job] job monitor thread has finished
[2025-10-09 01:01:37] 2025-10-09 05:01:09,835 | INFO     | [data] copytool_in thread has finished
[2025-10-09 01:01:37] 2025-10-09 05:01:10,086 | INFO     | [payload] validate_post thread has finished
[2025-10-09 01:01:37] 2025-10-09 05:01:10,096 | INFO     | [data] copytool_out thread has finished
[2025-10-09 01:01:37] 2025-10-09 05:01:10,225 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 01:01:37] 2025-10-09 05:01:10,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 01:01:37] 2025-10-09 05:01:14,374 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 01:01:37] 2025-10-09 05:01:18,180 | INFO     | job.realtimelogging is not enabled
[2025-10-09 01:01:37] 2025-10-09 05:01:19,185 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 01:01:37] 2025-10-09 05:01:20,256 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140087228716864)>', '<ExcThread(monitor, started 140086624626432)>']
[2025-10-09 01:01:37] 2025-10-09 05:01:25,276 | INFO     | all workflow threads have been joined
[2025-10-09 01:01:37] 2025-10-09 05:01:25,276 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 01:01:37] 2025-10-09 05:01:25,276 | INFO     | traces error code: 0
[2025-10-09 01:01:37] 2025-10-09 05:01:25,276 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 01:01:37] 2025-10-09 05:01:37,633 | INFO     | PID=24287 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 01:01:37] 2025-10-09 05:01:37,634 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 01:01:37] 2025-10-09 05:01:37,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 01:01:37] 2025-10-09 05:01:37,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 01:01:37] 2025-10-09 05:01:37,634 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 01:01:37] 2025-10-09 05:01:37,634 | INFO     | [monitor] control thread has ended
[2025-10-09 01:01:37] 2025-10-09 05:01:37,717 [wrapper] ==== pilot stdout END ====
[2025-10-09 01:01:37] 2025-10-09 05:01:37,721 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 01:01:37] 2025-10-09 05:01:37,725 [wrapper] pilotpid: 24287
[2025-10-09 01:01:37] 2025-10-09 05:01:37,729 [wrapper] Pilot exit status: 0
[2025-10-09 01:01:37] 2025-10-09 05:01:37,745 [wrapper] pandaids: 6835982229
[2025-10-09 01:01:37] 2025-10-09 05:01:37,786 [wrapper] cleanup supervisor_pilot 21811 24288
[2025-10-09 01:01:37] 2025-10-09 05:01:37,790 [wrapper] Test setup, not cleaning
[2025-10-09 01:01:37] 2025-10-09 05:01:37,794 [wrapper] apfmon messages muted
[2025-10-09 01:01:37] 2025-10-09 05:01:37,798 [wrapper] ==== wrapper stdout END ====
[2025-10-09 01:01:37] 2025-10-09 05:01:37,801 [wrapper] ==== wrapper stderr END ====
[2025-10-09 01:01:37]  *** Error codes and diagnostics ***
[2025-10-09 01:01:37]     "exeErrorCode": 0,
[2025-10-09 01:01:37]     "exeErrorDiag": "",
[2025-10-09 01:01:37]     "pilotErrorCode": 0,
[2025-10-09 01:01:37]     "pilotErrorDiag": "",
[2025-10-09 01:01:37]  *** Listing of results directory ***
[2025-10-09 01:01:37] total 414516
[2025-10-09 01:01:37] -rw-r--r-- 1 boincer umatlas    557409 Oct  8 05:48 pilot3.tar.gz
[2025-10-09 01:01:37] -rw-r--r-- 1 boincer umatlas      5112 Oct  8 06:01 queuedata.json
[2025-10-09 01:01:37] -rwx------ 1 boincer umatlas     36292 Oct  8 06:01 runpilot2-wrapper.sh
[2025-10-09 01:01:37] -rw-r--r-- 1 boincer umatlas       100 Oct  8 23:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 01:01:37] -rwxr-xr-x 1 boincer umatlas      7986 Oct  8 23:44 run_atlas
[2025-10-09 01:01:37] -rw-r--r-- 1 boincer umatlas       105 Oct  8 23:44 job.xml
[2025-10-09 01:01:37] -rw-r--r-- 2 boincer umatlas 220693164 Oct  8 23:44 EVNT.46676267._000176.pool.root.1
[2025-10-09 01:01:37] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 23:44 start_atlas.sh
[2025-10-09 01:01:37] drwxrwx--x 2 boincer umatlas      4096 Oct  8 23:44 shared
[2025-10-09 01:01:37] -rw-r--r-- 2 boincer umatlas    569679 Oct  8 23:44 input.tar.gz
[2025-10-09 01:01:37] -rw-r--r-- 1 boincer umatlas         0 Oct  8 23:44 boinc_lockfile
[2025-10-09 01:01:37] -rw-r--r-- 1 boincer umatlas      2547 Oct  8 23:44 pandaJob.out
[2025-10-09 01:01:37] -rw------- 1 boincer umatlas    979306 Oct  8 23:45 agis_schedconf.cvmfs.json
[2025-10-09 01:01:37] -rw------- 1 boincer umatlas   1560401 Oct  8 23:45 agis_ddmendpoints.agis.ALL.json
[2025-10-09 01:01:37] drwx------ 5 boincer umatlas      4096 Oct  8 23:45 pilot3
[2025-10-09 01:01:37] -rw-r--r-- 1 boincer umatlas      5953 Oct  9 00:56 init_data.xml
[2025-10-09 01:01:37] -rw------- 1 boincer umatlas 197777901 Oct  9 01:00 HITS.46676269._004716.pool.root.1
[2025-10-09 01:01:37] -rw-r--r-- 1 boincer umatlas       529 Oct  9 01:00 boinc_task_state.xml
[2025-10-09 01:01:37] -rw------- 1 boincer umatlas      1050 Oct  9 01:00 memory_monitor_summary.json
[2025-10-09 01:01:37] -rw------- 1 boincer umatlas    383199 Oct  9 01:00 log.46676269._004716.job.log.tgz.1
[2025-10-09 01:01:37] -rw------- 1 boincer umatlas        95 Oct  9 01:01 pilot_heartbeat.json
[2025-10-09 01:01:37] -rw------- 1 boincer umatlas      7854 Oct  9 01:01 heartbeat.json
[2025-10-09 01:01:37] -rw-r--r-- 1 boincer umatlas        27 Oct  9 01:01 wrapper_checkpoint.txt
[2025-10-09 01:01:37] -rw-r--r-- 1 boincer umatlas      8192 Oct  9 01:01 boinc_mmap_file
[2025-10-09 01:01:37] -rw------- 1 boincer umatlas       745 Oct  9 01:01 pilotlog.txt
[2025-10-09 01:01:37] -rw------- 1 boincer umatlas    663483 Oct  9 01:01 log.46676269._004716.job.log.1
[2025-10-09 01:01:37] -rw------- 1 boincer umatlas       357 Oct  9 01:01 output.list
[2025-10-09 01:01:37] -rw-r--r-- 1 boincer umatlas       620 Oct  9 01:01 runtime_log
[2025-10-09 01:01:37] -rw------- 1 boincer umatlas   1064960 Oct  9 01:01 result.tar.gz
[2025-10-09 01:01:37] -rw-r--r-- 1 boincer umatlas      8705 Oct  9 01:01 runtime_log.err
[2025-10-09 01:01:37] -rw------- 1 boincer umatlas       659 Oct  9 01:01 fvPKDm09fQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbQMMDmxHvZvn.diag
[2025-10-09 01:01:37] -rw-r--r-- 1 boincer umatlas     21996 Oct  9 01:01 stderr.txt
[2025-10-09 01:01:37] HITS file was successfully produced:
[2025-10-09 01:01:37] -rw------- 1 boincer umatlas 197777901 Oct  9 01:00 shared/HITS.pool.root.1
[2025-10-09 01:01:37]  *** Contents of shared directory: ***
[2025-10-09 01:01:37] total 410292
[2025-10-09 01:01:37] -rw-r--r-- 2 boincer umatlas 220693164 Oct  8 23:44 ATLAS.root_0
[2025-10-09 01:01:37] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 23:44 start_atlas.sh
[2025-10-09 01:01:37] -rw-r--r-- 2 boincer umatlas    569679 Oct  8 23:44 input.tar.gz
[2025-10-09 01:01:37] -rw------- 1 boincer umatlas 197777901 Oct  9 01:00 HITS.pool.root.1
[2025-10-09 01:01:37] -rw------- 1 boincer umatlas   1064960 Oct  9 01:01 result.tar.gz
01:01:39 (20618): run_atlas exited; CPU time 48500.982593
01:01:39 (20618): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN