Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:45:03 (15343): wrapper (7.7.26015): starting
23:45:03 (15343): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 23:45:03] Arguments: --nthreads 8
[2025-10-08 23:45:03] Threads: 8
[2025-10-08 23:45:03] Checking for CVMFS
[2025-10-08 23:45:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 23:45:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 23:45:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 23:45:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 23:45:03] 2.11.2.0 3733 48056 113796 151495 0 17 13823205 18432001 86 130560 0 40222222 99.971 2216890 39525 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 23:45:03] CVMFS is ok
[2025-10-08 23:45:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 23:45:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 23:45:03] Further information can be found at the LHC@home message board.
[2025-10-08 23:45:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 23:45:03] Checking for apptainer binary...
[2025-10-08 23:45:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 23:45:03] Running /usr/bin/apptainer --version
[2025-10-08 23:45:03] apptainer version 1.3.2-1.el7
[2025-10-08 23:45:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 23:45:04] c-206-23.aglt2.org
[2025-10-08 23:45:04] apptainer works
[2025-10-08 23:45:04] Set ATHENA_PROC_NUMBER=8
[2025-10-08 23:45:04] Set ATHENA_CORE_NUMBER=8
[2025-10-08 23:45:04] Starting ATLAS job with PandaID=6835981735
[2025-10-08 23:45:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 02:12:35]  *** The last 200 lines of the pilot log: ***
[2025-10-09 02:12:35] 2025-10-09 06:11:46,161 | INFO     | monitor loop #654: job 0:6835981735 is in state 'finished'
[2025-10-09 02:12:35] 2025-10-09 06:11:46,161 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 02:12:35] 2025-10-09 06:11:46,586 | INFO     | time since job start (8789s) is within the limit (172800.0s)
[2025-10-09 02:12:35] 2025-10-09 06:11:48,497 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-09 02:12:35] 2025-10-09 06:11:48,501 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2006.4583333333333
[2025-10-09 02:12:35] 2025-10-09 06:11:48,504 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6835981735/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 02:12:35] 2025-10-09 06:11:48,504 | INFO     | extracted standard info from prmon json
[2025-10-09 02:12:35] 2025-10-09 06:11:48,504 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 02:12:35] 2025-10-09 06:11:48,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 02:12:35] 2025-10-09 06:11:48,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 02:12:35] 2025-10-09 06:11:48,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 02:12:35] 2025-10-09 06:11:48,507 | INFO     | fitting pss+swap vs Time
[2025-10-09 02:12:35] 2025-10-09 06:11:48,508 | INFO     | sum of square deviations: 925859220.0
[2025-10-09 02:12:35] 2025-10-09 06:11:48,508 | INFO     | sum of deviations: 9959655714.499998
[2025-10-09 02:12:35] 2025-10-09 06:11:48,509 | INFO     | mean x: 1759985904.5
[2025-10-09 02:12:35] 2025-10-09 06:11:48,509 | INFO     | mean y: 2485744.5208333335
[2025-10-09 02:12:35] 2025-10-09 06:11:48,509 | INFO     | -- intersect: -18930040164.972054
[2025-10-09 02:12:35] 2025-10-09 06:11:48,509 | INFO     | intersect: -18930040164.972054
[2025-10-09 02:12:35] 2025-10-09 06:11:48,509 | INFO     | chi2: 1.2856195154894245
[2025-10-09 02:12:35] 2025-10-09 06:11:48,509 | INFO     | sum of square deviations: 832722590.0
[2025-10-09 02:12:35] 2025-10-09 06:11:48,510 | INFO     | sum of deviations: 9644510774.0
[2025-10-09 02:12:35] 2025-10-09 06:11:48,510 | INFO     | mean x: 1759985752.0
[2025-10-09 02:12:35] 2025-10-09 06:11:48,510 | INFO     | mean y: 2485228.3021582733
[2025-10-09 02:12:35] 2025-10-09 06:11:48,510 | INFO     | -- intersect: -20381495885.084583
[2025-10-09 02:12:35] 2025-10-09 06:11:48,511 | INFO     | intersect: -20381495885.084583
[2025-10-09 02:12:35] 2025-10-09 06:11:48,511 | INFO     | chi2: 1.287011935132878
[2025-10-09 02:12:35] 2025-10-09 06:11:48,511 | INFO     | current chi2=1.287011935132878 (change=-0.10830728895114021 %)
[2025-10-09 02:12:35] 2025-10-09 06:11:48,511 | INFO     | right removable region: 138
[2025-10-09 02:12:35] 2025-10-09 06:11:48,511 | INFO     | sum of square deviations: 832722590.0
[2025-10-09 02:12:35] 2025-10-09 06:11:48,512 | INFO     | sum of deviations: -8953438785.000002
[2025-10-09 02:12:35] 2025-10-09 06:11:48,512 | INFO     | mean x: 1759986057.0
[2025-10-09 02:12:35] 2025-10-09 06:11:48,512 | INFO     | mean y: 2516170.7338129496
[2025-10-09 02:12:35] 2025-10-09 06:11:48,512 | INFO     | -- intersect: 18925897874.360977
[2025-10-09 02:12:35] 2025-10-09 06:11:48,512 | INFO     | intersect: 18925897874.360977
[2025-10-09 02:12:35] 2025-10-09 06:11:48,513 | INFO     | chi2: 0.025764670091992646
[2025-10-09 02:12:35] 2025-10-09 06:11:48,513 | INFO     | current chi2=0.025764670091992646 (change=97.99593349497465 %)
[2025-10-09 02:12:35] 2025-10-09 06:11:48,513 | INFO     | sum of square deviations: 746051197.5
[2025-10-09 02:12:35] 2025-10-09 06:11:48,514 | INFO     | sum of deviations: -7770813149.500001
[2025-10-09 02:12:35] 2025-10-09 06:11:48,514 | INFO     | mean x: 1759986209.5
[2025-10-09 02:12:35] 2025-10-09 06:11:48,514 | INFO     | mean y: 2514078.1119402987
[2025-10-09 02:12:35] 2025-10-09 06:11:48,514 | INFO     | -- intersect: 18334398036.6807
[2025-10-09 02:12:35] 2025-10-09 06:11:48,514 | INFO     | intersect: 18334398036.6807
[2025-10-09 02:12:35] 2025-10-09 06:11:48,514 | INFO     | chi2: 0.025456561201735877
[2025-10-09 02:12:35] 2025-10-09 06:11:48,514 | INFO     | current chi2=0.025456561201735877 (change=1.1958580845656765 %)
[2025-10-09 02:12:35] 2025-10-09 06:11:48,514 | INFO     | left removable region: 20
[2025-10-09 02:12:35] 2025-10-09 06:11:48,515 | INFO     | sum of square deviations: 509440249.5
[2025-10-09 02:12:35] 2025-10-09 06:11:48,515 | INFO     | sum of deviations: -3744934417.4999995
[2025-10-09 02:12:35] 2025-10-09 06:11:48,515 | INFO     | mean x: 1759986331.5
[2025-10-09 02:12:35] 2025-10-09 06:11:48,515 | INFO     | mean y: 2506697.9237288134
[2025-10-09 02:12:35] 2025-10-09 06:11:48,516 | INFO     | -- intersect: 12940301451.347336
[2025-10-09 02:12:35] 2025-10-09 06:11:48,516 | INFO     | intersect: 12940301451.347336
[2025-10-09 02:12:35] 2025-10-09 06:11:48,516 | INFO     | chi2: 0.018389118496572078
[2025-10-09 02:12:35] 2025-10-09 06:11:48,516 | INFO     | -- intersect: 12940301451.347336
[2025-10-09 02:12:35] 2025-10-09 06:11:48,516 | INFO     | current memory leak: -7.35 B/s (using 118 data points, chi2=0.02)
[2025-10-09 02:12:35] 2025-10-09 06:11:48,516 | INFO     | could have reported an average CPU frequency of 2192 MHz (8 samples)
[2025-10-09 02:12:35] 2025-10-09 06:11:48,517 | INFO     | ..............................
[2025-10-09 02:12:35] 2025-10-09 06:11:48,517 | INFO     | . Timing measurements:
[2025-10-09 02:12:35] 2025-10-09 06:11:48,517 | INFO     | . get job = 0 s
[2025-10-09 02:12:35] 2025-10-09 06:11:48,517 | INFO     | . initial setup = 2 s
[2025-10-09 02:12:35] 2025-10-09 06:11:48,517 | INFO     | . payload setup = 6 s
[2025-10-09 02:12:35] 2025-10-09 06:11:48,517 | INFO     | . stage-in = 0 s
[2025-10-09 02:12:35] 2025-10-09 06:11:48,517 | INFO     | . payload execution = 8756 s
[2025-10-09 02:12:35] 2025-10-09 06:11:48,517 | INFO     | . stage-out = 0 s
[2025-10-09 02:12:35] 2025-10-09 06:11:48,517 | INFO     | . log creation = 0 s
[2025-10-09 02:12:35] 2025-10-09 06:11:48,518 | INFO     | ..............................
[2025-10-09 02:12:35] 2025-10-09 06:11:48,596 | INFO     | time since job start (8791s) is within the limit (172800.0s)
[2025-10-09 02:12:35] 2025-10-09 06:11:48,689 | INFO     | 
[2025-10-09 02:12:35] 2025-10-09 06:11:48,690 | INFO     | job summary report
[2025-10-09 02:12:35] 2025-10-09 06:11:48,690 | INFO     | --------------------------------------------------
[2025-10-09 02:12:35] 2025-10-09 06:11:48,690 | INFO     | PanDA job id: 6835981735
[2025-10-09 02:12:35] 2025-10-09 06:11:48,690 | INFO     | task id: 46676269
[2025-10-09 02:12:35] 2025-10-09 06:11:48,690 | INFO     | errors: (none)
[2025-10-09 02:12:35] 2025-10-09 06:11:48,690 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 02:12:35] 2025-10-09 06:11:48,690 | INFO     | pilot state: finished 
[2025-10-09 02:12:35] 2025-10-09 06:11:48,690 | INFO     | transexitcode: 0
[2025-10-09 02:12:35] 2025-10-09 06:11:48,690 | INFO     | exeerrorcode: 0
[2025-10-09 02:12:35] 2025-10-09 06:11:48,691 | INFO     | exeerrordiag: 
[2025-10-09 02:12:35] 2025-10-09 06:11:48,691 | INFO     | exitcode: 0
[2025-10-09 02:12:35] 2025-10-09 06:11:48,691 | INFO     | exitmsg: OK
[2025-10-09 02:12:35] 2025-10-09 06:11:48,691 | INFO     | cpuconsumptiontime: 66616 s
[2025-10-09 02:12:35] 2025-10-09 06:11:48,691 | INFO     | nevents: 400
[2025-10-09 02:12:35] 2025-10-09 06:11:48,691 | INFO     | neventsw: 0
[2025-10-09 02:12:35] 2025-10-09 06:11:48,691 | INFO     | pid: 6800
[2025-10-09 02:12:35] 2025-10-09 06:11:48,691 | INFO     | pgrp: 6800
[2025-10-09 02:12:35] 2025-10-09 06:11:48,691 | INFO     | corecount: 8
[2025-10-09 02:12:35] 2025-10-09 06:11:48,692 | INFO     | event service: False
[2025-10-09 02:12:35] 2025-10-09 06:11:48,692 | INFO     | sizes: {0: 2348678, 1: 2348877, 5: 2349139, 12: 2349195, 8766: 2377328, 8768: 2386326, 8770: 2386510, 8776: 2386704}
[2025-10-09 02:12:35] 2025-10-09 06:11:48,692 | INFO     | --------------------------------------------------
[2025-10-09 02:12:35] 2025-10-09 06:11:48,692 | INFO     | 
[2025-10-09 02:12:35] 2025-10-09 06:11:48,692 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-09 02:12:35] 2025-10-09 06:11:48,709 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,709 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,709 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,709 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,710 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,710 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,711 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,711 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,711 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,711 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,712 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,712 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 02:12:35] 2025-10-09 06:11:48,712 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,712 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 02:12:35] 2025-10-09 06:11:48,713 | INFO     | job 6835981735 has completed (purged errors)
[2025-10-09 02:12:35] 2025-10-09 06:11:48,713 | INFO     | overall cleanup function is called
[2025-10-09 02:12:35] 2025-10-09 06:11:49,720 | INFO     | --- collectZombieJob: --- 10, [6800]
[2025-10-09 02:12:35] 2025-10-09 06:11:49,727 | INFO     | zombie collector waiting for pid 6800
[2025-10-09 02:12:35] 2025-10-09 06:11:49,727 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 02:12:35] 2025-10-09 06:11:49,727 | INFO     | collected zombie processes
[2025-10-09 02:12:35] 2025-10-09 06:11:49,727 | INFO     | will attempt to kill all subprocesses of pid=6800
[2025-10-09 02:12:35] 2025-10-09 06:11:49,843 | INFO     | process IDs to be killed: [6800] (in reverse order)
[2025-10-09 02:12:35] 2025-10-09 06:11:49,883 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 02:12:35] 2025-10-09 06:11:49,884 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 02:12:35] 2025-10-09 06:11:49,886 | INFO     | did not find any defunct processes belonging to 6800
[2025-10-09 02:12:35] 2025-10-09 06:11:49,889 | INFO     | did not find any defunct processes belonging to 6800
[2025-10-09 02:12:35] 2025-10-09 06:11:49,889 | INFO     | ready for new job
[2025-10-09 02:12:35] 2025-10-09 06:11:49,889 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 02:12:35] 2025-10-09 06:11:49,892 | INFO     | ***************************************
[2025-10-09 02:12:35] 2025-10-09 06:11:49,892 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 02:12:35] 2025-10-09 06:11:49,892 | INFO     | ***************************************
[2025-10-09 02:12:35] 2025-10-09 06:11:49,892 | INFO     | 
[2025-10-09 02:12:35] 2025-10-09 06:11:49,893 | INFO     | architecture information:
[2025-10-09 02:12:35] 2025-10-09 06:11:49,893 | INFO     | executing command: cat /etc/os-release
[2025-10-09 02:12:35] 2025-10-09 06:11:49,903 | INFO     | cat /etc/os-release:
[2025-10-09 02:12:35] NAME="CentOS Linux"
[2025-10-09 02:12:35] VERSION="7 (Core)"
[2025-10-09 02:12:35] ID="centos"
[2025-10-09 02:12:35] ID_LIKE="rhel fedora"
[2025-10-09 02:12:35] VERSION_ID="7"
[2025-10-09 02:12:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 02:12:35] ANSI_COLOR="0;31"
[2025-10-09 02:12:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 02:12:35] HOME_URL="https://www.centos.org/"
[2025-10-09 02:12:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 02:12:35] 
[2025-10-09 02:12:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 02:12:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 02:12:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 02:12:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 02:12:35] 
[2025-10-09 02:12:35] 2025-10-09 06:11:49,903 | INFO     | ***************************************
[2025-10-09 02:12:35] 2025-10-09 06:11:50,405 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-09 02:12:35] 2025-10-09 06:11:50,416 | INFO     | sufficient remaining disk space (28730982400 B)
[2025-10-09 02:12:35] 2025-10-09 06:11:50,416 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 02:12:35] 2025-10-09 06:11:50,417 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 02:12:35] 2025-10-09 06:11:50,417 | INFO     | update_server=False
[2025-10-09 02:12:35] 2025-10-09 06:11:50,417 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 02:12:35] 2025-10-09 06:11:50,417 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 02:12:35] 2025-10-09 06:11:50,417 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 02:12:35] 2025-10-09 06:11:50,417 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-09 02:12:35] 2025-10-09 06:11:50,418 | INFO     | aborting loop
[2025-10-09 02:12:35] 2025-10-09 06:11:50,418 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 02:12:35] 2025-10-09 06:11:50,419 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 02:12:35] 2025-10-09 06:11:50,419 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 02:12:35] 2025-10-09 06:11:50,467 | INFO     | all job control threads have been joined
[2025-10-09 02:12:35] 2025-10-09 06:11:50,859 | INFO     | all payload control threads have been joined
[2025-10-09 02:12:35] 2025-10-09 06:11:51,225 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 02:12:35] 2025-10-09 06:11:51,422 | INFO     | [job] retrieve thread has finished
[2025-10-09 02:12:35] 2025-10-09 06:11:51,423 | INFO     | [job] queue monitor thread has finished
[2025-10-09 02:12:35] 2025-10-09 06:11:51,424 | INFO     | [job] job monitor thread has finished
[2025-10-09 02:12:35] 2025-10-09 06:11:51,425 | INFO     | [job] validate thread has finished
[2025-10-09 02:12:35] 2025-10-09 06:11:51,462 | INFO     | [payload] failed_post thread has finished
[2025-10-09 02:12:35] 2025-10-09 06:11:51,471 | INFO     | all data control threads have been joined
[2025-10-09 02:12:35] 2025-10-09 06:11:51,472 | INFO     | [job] control thread has finished
[2025-10-09 02:12:35] 2025-10-09 06:11:51,578 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 02:12:35] 2025-10-09 06:11:51,601 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 02:12:35] 2025-10-09 06:11:51,752 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 02:12:35] 2025-10-09 06:11:51,864 | INFO     | [payload] control thread has finished
[2025-10-09 02:12:35] 2025-10-09 06:11:52,230 | INFO     | [data] copytool_in thread has finished
[2025-10-09 02:12:35] 2025-10-09 06:11:52,327 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 02:12:35] 2025-10-09 06:11:52,476 | INFO     | [data] control thread has finished
[2025-10-09 02:12:35] 2025-10-09 06:11:52,641 | INFO     | [payload] validate_post thread has finished
[2025-10-09 02:12:35] 2025-10-09 06:11:53,055 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 02:12:35] 2025-10-09 06:11:53,230 | INFO     | [data] copytool_out thread has finished
[2025-10-09 02:12:35] 2025-10-09 06:11:57,060 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 02:12:35] 2025-10-09 06:12:29,412 | INFO     | [monitor] cgroup control has ended
[2025-10-09 02:12:35] 2025-10-09 06:12:29,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139839388686144)>', '<ExcThread(monitor, started 139838279898880)>']
[2025-10-09 02:12:35] 2025-10-09 06:12:30,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 02:12:35] 2025-10-09 06:12:30,606 | INFO     | [monitor] control thread has ended
[2025-10-09 02:12:35] 2025-10-09 06:12:34,858 | INFO     | all workflow threads have been joined
[2025-10-09 02:12:35] 2025-10-09 06:12:34,859 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 02:12:35] 2025-10-09 06:12:34,859 | INFO     | traces error code: 0
[2025-10-09 02:12:35] 2025-10-09 06:12:34,859 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 02:12:35] 2025-10-09 06:12:34,951 [wrapper] ==== pilot stdout END ====
[2025-10-09 02:12:35] 2025-10-09 06:12:34,954 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 02:12:35] 2025-10-09 06:12:34,956 [wrapper] pilotpid: 21079
[2025-10-09 02:12:35] 2025-10-09 06:12:34,958 [wrapper] Pilot exit status: 0
[2025-10-09 02:12:35] 2025-10-09 06:12:34,967 [wrapper] pandaids: 6835981735
[2025-10-09 02:12:35] 2025-10-09 06:12:34,995 [wrapper] cleanup supervisor_pilot  1922 21080
[2025-10-09 02:12:35] 2025-10-09 06:12:34,998 [wrapper] Test setup, not cleaning
[2025-10-09 02:12:35] 2025-10-09 06:12:35,001 [wrapper] apfmon messages muted
[2025-10-09 02:12:35] 2025-10-09 06:12:35,003 [wrapper] ==== wrapper stdout END ====
[2025-10-09 02:12:35] 2025-10-09 06:12:35,005 [wrapper] ==== wrapper stderr END ====
[2025-10-09 02:12:35]  *** Error codes and diagnostics ***
[2025-10-09 02:12:35]     "exeErrorCode": 0,
[2025-10-09 02:12:35]     "exeErrorDiag": "",
[2025-10-09 02:12:35]     "pilotErrorCode": 0,
[2025-10-09 02:12:35]     "pilotErrorDiag": "",
[2025-10-09 02:12:35]  *** Listing of results directory ***
[2025-10-09 02:12:35] total 411756
[2025-10-09 02:12:35] -rw-r--r-- 1 boincer umatlas    557409 Oct  8 05:48 pilot3.tar.gz
[2025-10-09 02:12:35] -rwx------ 1 boincer umatlas     36292 Oct  8 06:01 runpilot2-wrapper.sh
[2025-10-09 02:12:35] -rw-r--r-- 1 boincer umatlas      5112 Oct  8 06:01 queuedata.json
[2025-10-09 02:12:35] -rw-r--r-- 1 boincer umatlas       100 Oct  8 23:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 02:12:35] -rwxr-xr-x 1 boincer umatlas      7986 Oct  8 23:45 run_atlas
[2025-10-09 02:12:35] -rw-r--r-- 1 boincer umatlas       105 Oct  8 23:45 job.xml
[2025-10-09 02:12:35] -rw-r--r-- 2 boincer umatlas 222189558 Oct  8 23:45 EVNT.46676267._000856.pool.root.1
[2025-10-09 02:12:35] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 23:45 start_atlas.sh
[2025-10-09 02:12:35] drwxrwx--x 2 boincer umatlas      4096 Oct  8 23:45 shared
[2025-10-09 02:12:35] -rw-r--r-- 2 boincer umatlas    569673 Oct  8 23:45 input.tar.gz
[2025-10-09 02:12:35] -rw-r--r-- 1 boincer umatlas         0 Oct  8 23:45 boinc_lockfile
[2025-10-09 02:12:35] -rw-r--r-- 1 boincer umatlas      2546 Oct  8 23:45 pandaJob.out
[2025-10-09 02:12:35] -rw------- 1 boincer umatlas    979306 Oct  8 23:45 agis_schedconf.cvmfs.json
[2025-10-09 02:12:35] -rw------- 1 boincer umatlas   1560401 Oct  8 23:45 agis_ddmendpoints.agis.ALL.json
[2025-10-09 02:12:35] drwx------ 5 boincer umatlas      4096 Oct  8 23:45 pilot3
[2025-10-09 02:12:35] -rw------- 1 boincer umatlas 192285655 Oct  9 02:11 HITS.46676269._004607.pool.root.1
[2025-10-09 02:12:35] -rw-r--r-- 1 boincer umatlas       529 Oct  9 02:11 boinc_task_state.xml
[2025-10-09 02:12:35] -rw------- 1 boincer umatlas        95 Oct  9 02:11 pilot_heartbeat.json
[2025-10-09 02:12:35] -rw------- 1 boincer umatlas      1049 Oct  9 02:11 memory_monitor_summary.json
[2025-10-09 02:12:35] -rw------- 1 boincer umatlas    374063 Oct  9 02:11 log.46676269._004607.job.log.tgz.1
[2025-10-09 02:12:35] -rw------- 1 boincer umatlas      7841 Oct  9 02:11 heartbeat.json
[2025-10-09 02:12:35] -rw-r--r-- 1 boincer umatlas      5951 Oct  9 02:12 init_data.xml
[2025-10-09 02:12:35] -rw-r--r-- 1 boincer umatlas      8192 Oct  9 02:12 boinc_mmap_file
[2025-10-09 02:12:35] -rw-r--r-- 1 boincer umatlas        27 Oct  9 02:12 wrapper_checkpoint.txt
[2025-10-09 02:12:35] -rw------- 1 boincer umatlas      4552 Oct  9 02:12 pilotlog.txt
[2025-10-09 02:12:35] -rw------- 1 boincer umatlas   1253471 Oct  9 02:12 log.46676269._004607.job.log.1
[2025-10-09 02:12:35] -rw------- 1 boincer umatlas       357 Oct  9 02:12 output.list
[2025-10-09 02:12:35] -rw-r--r-- 1 boincer umatlas       620 Oct  9 02:12 runtime_log
[2025-10-09 02:12:35] -rw------- 1 boincer umatlas   1648640 Oct  9 02:12 result.tar.gz
[2025-10-09 02:12:35] -rw-r--r-- 1 boincer umatlas      8703 Oct  9 02:12 runtime_log.err
[2025-10-09 02:12:35] -rw------- 1 boincer umatlas       658 Oct  9 02:12 21RNDmr9fQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmkPMMDmlkEzCn.diag
[2025-10-09 02:12:35] -rw-r--r-- 1 boincer umatlas     21051 Oct  9 02:12 stderr.txt
[2025-10-09 02:12:35] HITS file was successfully produced:
[2025-10-09 02:12:35] -rw------- 1 boincer umatlas 192285655 Oct  9 02:11 shared/HITS.pool.root.1
[2025-10-09 02:12:35]  *** Contents of shared directory: ***
[2025-10-09 02:12:35] total 406956
[2025-10-09 02:12:35] -rw-r--r-- 2 boincer umatlas 222189558 Oct  8 23:45 ATLAS.root_0
[2025-10-09 02:12:35] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 23:45 start_atlas.sh
[2025-10-09 02:12:35] -rw-r--r-- 2 boincer umatlas    569673 Oct  8 23:45 input.tar.gz
[2025-10-09 02:12:35] -rw------- 1 boincer umatlas 192285655 Oct  9 02:11 HITS.pool.root.1
[2025-10-09 02:12:35] -rw------- 1 boincer umatlas   1648640 Oct  9 02:12 result.tar.gz
02:12:37 (15343): run_atlas exited; CPU time 66728.008035
02:12:37 (15343): called boinc_finish(0)

</stderr_txt>
]]>

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