Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:47:54 (12938): wrapper (7.7.26015): starting
22:47:54 (12938): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 22:47:54] Arguments: --nthreads 8
[2025-10-08 22:47:54] Threads: 8
[2025-10-08 22:47:54] Checking for CVMFS
[2025-10-08 22:47:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 22:47:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 22:47:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 22:47:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 22:47:54] 2.11.2.0 12540 47966 117552 151493 3 188 15168357 18432000 942 130560 0 40704480 99.972 2216807 38669 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 22:47:54] CVMFS is ok
[2025-10-08 22:47:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 22:47:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 22:47:54] Further information can be found at the LHC@home message board.
[2025-10-08 22:47:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 22:47:54] Checking for apptainer binary...
[2025-10-08 22:47:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 22:47:54] Running /usr/bin/apptainer --version
[2025-10-08 22:47:54] apptainer version 1.3.2-1.el7
[2025-10-08 22:47:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 22:47:54] c-206-17.aglt2.org
[2025-10-08 22:47:54] apptainer works
[2025-10-08 22:47:54] Set ATHENA_PROC_NUMBER=8
[2025-10-08 22:47:54] Set ATHENA_CORE_NUMBER=8
[2025-10-08 22:47:54] Starting ATLAS job with PandaID=6826566062
[2025-10-08 22:47:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 02:15:28]  *** The last 200 lines of the pilot log: ***
[2025-10-09 02:15:28] 2025-10-09 06:14:23,327 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 02:15:28] 2025-10-09 06:14:23,327 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 02:15:28] 2025-10-09 06:14:23,327 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 02:15:28] 2025-10-09 06:14:23,327 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 02:15:28] 2025-10-09 06:14:23,330 | INFO     | fitting pss+swap vs Time
[2025-10-09 02:15:28] 2025-10-09 06:14:23,331 | INFO     | sum of square deviations: 2593916542.0
[2025-10-09 02:15:28] 2025-10-09 06:14:23,332 | INFO     | sum of deviations: 15611657105.000002
[2025-10-09 02:15:28] 2025-10-09 06:14:23,332 | INFO     | mean x: 1759984268.0
[2025-10-09 02:15:28] 2025-10-09 06:14:23,332 | INFO     | mean y: 2458445.261083744
[2025-10-09 02:15:28] 2025-10-09 06:14:23,332 | INFO     | -- intersect: -10590122486.824444
[2025-10-09 02:15:28] 2025-10-09 06:14:23,332 | INFO     | intersect: -10590122486.824444
[2025-10-09 02:15:28] 2025-10-09 06:14:23,333 | INFO     | chi2: 2.1879261703102575
[2025-10-09 02:15:28] 2025-10-09 06:14:23,333 | INFO     | sum of square deviations: 2406926989.5
[2025-10-09 02:15:28] 2025-10-09 06:14:23,334 | INFO     | sum of deviations: 28615273514.5
[2025-10-09 02:15:28] 2025-10-09 06:14:23,334 | INFO     | mean x: 1759984115.5
[2025-10-09 02:15:28] 2025-10-09 06:14:23,334 | INFO     | mean y: 2468827.3383838385
[2025-10-09 02:15:28] 2025-10-09 06:14:23,335 | INFO     | -- intersect: -20921484024.538456
[2025-10-09 02:15:28] 2025-10-09 06:14:23,335 | INFO     | intersect: -20921484024.538456
[2025-10-09 02:15:28] 2025-10-09 06:14:23,335 | INFO     | chi2: 1.3764936373891206
[2025-10-09 02:15:28] 2025-10-09 06:14:23,335 | INFO     | current chi2=1.3764936373891206 (change=37.08683336449475 %)
[2025-10-09 02:15:28] 2025-10-09 06:14:23,335 | INFO     | sum of square deviations: 2229146912.0
[2025-10-09 02:15:28] 2025-10-09 06:14:23,336 | INFO     | sum of deviations: 27673302212.000004
[2025-10-09 02:15:28] 2025-10-09 06:14:23,336 | INFO     | mean x: 1759983963.0
[2025-10-09 02:15:28] 2025-10-09 06:14:23,337 | INFO     | mean y: 2468019.160621762
[2025-10-09 02:15:28] 2025-10-09 06:14:23,337 | INFO     | -- intersect: -21846503815.842613
[2025-10-09 02:15:28] 2025-10-09 06:14:23,337 | INFO     | intersect: -21846503815.842613
[2025-10-09 02:15:28] 2025-10-09 06:14:23,337 | INFO     | chi2: 1.3773373941548954
[2025-10-09 02:15:28] 2025-10-09 06:14:23,337 | INFO     | current chi2=1.3773373941548954 (change=-0.06129754201953786 %)
[2025-10-09 02:15:28] 2025-10-09 06:14:23,337 | INFO     | right removable region: 192
[2025-10-09 02:15:28] 2025-10-09 06:14:23,338 | INFO     | sum of square deviations: 2406926989.5
[2025-10-09 02:15:28] 2025-10-09 06:14:23,339 | INFO     | sum of deviations: -14270448854.5
[2025-10-09 02:15:28] 2025-10-09 06:14:23,339 | INFO     | mean x: 1759984420.5
[2025-10-09 02:15:28] 2025-10-09 06:14:23,339 | INFO     | mean y: 2482557.207070707
[2025-10-09 02:15:28] 2025-10-09 06:14:23,339 | INFO     | -- intersect: 10437268392.85033
[2025-10-09 02:15:28] 2025-10-09 06:14:23,339 | INFO     | intersect: 10437268392.85033
[2025-10-09 02:15:28] 2025-10-09 06:14:23,339 | INFO     | chi2: 0.8472227855514988
[2025-10-09 02:15:28] 2025-10-09 06:14:23,340 | INFO     | current chi2=0.8472227855514988 (change=61.27735949008923 %)
[2025-10-09 02:15:28] 2025-10-09 06:14:23,340 | INFO     | sum of square deviations: 2229146912.0
[2025-10-09 02:15:28] 2025-10-09 06:14:23,341 | INFO     | sum of deviations: -13725422791.0
[2025-10-09 02:15:28] 2025-10-09 06:14:23,341 | INFO     | mean x: 1759984573.0
[2025-10-09 02:15:28] 2025-10-09 06:14:23,341 | INFO     | mean y: 2482083.476683938
[2025-10-09 02:15:28] 2025-10-09 06:14:23,341 | INFO     | -- intersect: 10839153385.858124
[2025-10-09 02:15:28] 2025-10-09 06:14:23,341 | INFO     | intersect: 10839153385.858124
[2025-10-09 02:15:28] 2025-10-09 06:14:23,342 | INFO     | chi2: 0.847335124309123
[2025-10-09 02:15:28] 2025-10-09 06:14:23,342 | INFO     | current chi2=0.847335124309123 (change=-0.013259647821092116 %)
[2025-10-09 02:15:28] 2025-10-09 06:14:23,342 | INFO     | left removable region: 20
[2025-10-09 02:15:28] 2025-10-09 06:14:23,342 | INFO     | sum of square deviations: 1577789583.0
[2025-10-09 02:15:28] 2025-10-09 06:14:23,343 | INFO     | sum of deviations: 2273342052.5
[2025-10-09 02:15:28] 2025-10-09 06:14:23,343 | INFO     | mean x: 1759984542.5
[2025-10-09 02:15:28] 2025-10-09 06:14:23,343 | INFO     | mean y: 2490126.2965116277
[2025-10-09 02:15:28] 2025-10-09 06:14:23,343 | INFO     | -- intersect: -2533365678.130626
[2025-10-09 02:15:28] 2025-10-09 06:14:23,343 | INFO     | intersect: -2533365678.130626
[2025-10-09 02:15:28] 2025-10-09 06:14:23,344 | INFO     | chi2: 0.008774475832720991
[2025-10-09 02:15:28] 2025-10-09 06:14:23,344 | INFO     | -- intersect: -2533365678.130626
[2025-10-09 02:15:28] 2025-10-09 06:14:23,344 | INFO     | current memory leak: 1.44 B/s (using 172 data points, chi2=0.01)
[2025-10-09 02:15:28] 2025-10-09 06:14:23,344 | INFO     | could have reported an average CPU frequency of 2352 MHz (10 samples)
[2025-10-09 02:15:28] 2025-10-09 06:14:23,344 | INFO     | ..............................
[2025-10-09 02:15:28] 2025-10-09 06:14:23,345 | INFO     | . Timing measurements:
[2025-10-09 02:15:28] 2025-10-09 06:14:23,345 | INFO     | . get job = 0 s
[2025-10-09 02:15:28] 2025-10-09 06:14:23,345 | INFO     | . initial setup = 2 s
[2025-10-09 02:15:28] 2025-10-09 06:14:23,345 | INFO     | . payload setup = 4 s
[2025-10-09 02:15:28] 2025-10-09 06:14:23,345 | INFO     | . stage-in = 0 s
[2025-10-09 02:15:28] 2025-10-09 06:14:23,345 | INFO     | . payload execution = 12345 s
[2025-10-09 02:15:28] 2025-10-09 06:14:23,345 | INFO     | . stage-out = 2 s
[2025-10-09 02:15:28] 2025-10-09 06:14:23,345 | INFO     | . log creation = 0 s
[2025-10-09 02:15:28] 2025-10-09 06:14:23,345 | INFO     | ..............................
[2025-10-09 02:15:28] 2025-10-09 06:14:23,427 | INFO     | 
[2025-10-09 02:15:28] 2025-10-09 06:14:23,427 | INFO     | job summary report
[2025-10-09 02:15:28] 2025-10-09 06:14:23,428 | INFO     | --------------------------------------------------
[2025-10-09 02:15:28] 2025-10-09 06:14:23,428 | INFO     | PanDA job id: 6826566062
[2025-10-09 02:15:28] 2025-10-09 06:14:23,428 | INFO     | task id: 46373048
[2025-10-09 02:15:28] 2025-10-09 06:14:23,428 | INFO     | errors: (none)
[2025-10-09 02:15:28] 2025-10-09 06:14:23,428 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 02:15:28] 2025-10-09 06:14:23,428 | INFO     | pilot state: finished 
[2025-10-09 02:15:28] 2025-10-09 06:14:23,429 | INFO     | transexitcode: 0
[2025-10-09 02:15:28] 2025-10-09 06:14:23,429 | INFO     | exeerrorcode: 0
[2025-10-09 02:15:28] 2025-10-09 06:14:23,429 | INFO     | exeerrordiag: 
[2025-10-09 02:15:28] 2025-10-09 06:14:23,429 | INFO     | exitcode: 0
[2025-10-09 02:15:28] 2025-10-09 06:14:23,429 | INFO     | exitmsg: OK
[2025-10-09 02:15:28] 2025-10-09 06:14:23,429 | INFO     | cpuconsumptiontime: 94796 s
[2025-10-09 02:15:28] 2025-10-09 06:14:23,430 | INFO     | nevents: 400
[2025-10-09 02:15:28] 2025-10-09 06:14:23,430 | INFO     | neventsw: 0
[2025-10-09 02:15:28] 2025-10-09 06:14:23,430 | INFO     | pid: 3983
[2025-10-09 02:15:28] 2025-10-09 06:14:23,430 | INFO     | pgrp: 3983
[2025-10-09 02:15:28] 2025-10-09 06:14:23,430 | INFO     | corecount: 8
[2025-10-09 02:15:28] 2025-10-09 06:14:23,430 | INFO     | event service: False
[2025-10-09 02:15:28] 2025-10-09 06:14:23,431 | INFO     | sizes: {0: 2348841, 3: 2349103, 11: 2349131, 12352: 2379066, 12355: 2388064, 12357: 2388120, 12365: 2388442}
[2025-10-09 02:15:28] 2025-10-09 06:14:23,431 | INFO     | --------------------------------------------------
[2025-10-09 02:15:28] 2025-10-09 06:14:23,431 | INFO     | 
[2025-10-09 02:15:28] 2025-10-09 06:14:23,431 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-09 02:15:28] 2025-10-09 06:14:23,452 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,453 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,453 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,453 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,453 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,453 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,454 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,454 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,454 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,454 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,454 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,455 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,455 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,455 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,455 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,455 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,455 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,456 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 02:15:28] 2025-10-09 06:14:23,456 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,456 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 02:15:28] 2025-10-09 06:14:23,456 | INFO     | job 6826566062 has completed (purged errors)
[2025-10-09 02:15:28] 2025-10-09 06:14:23,456 | INFO     | overall cleanup function is called
[2025-10-09 02:15:28] 2025-10-09 06:14:24,464 | INFO     | --- collectZombieJob: --- 10, [3983]
[2025-10-09 02:15:28] 2025-10-09 06:14:24,464 | INFO     | zombie collector waiting for pid 3983
[2025-10-09 02:15:28] 2025-10-09 06:14:24,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 02:15:28] 2025-10-09 06:14:24,465 | INFO     | collected zombie processes
[2025-10-09 02:15:28] 2025-10-09 06:14:24,465 | INFO     | will attempt to kill all subprocesses of pid=3983
[2025-10-09 02:15:28] 2025-10-09 06:14:24,567 | INFO     | process IDs to be killed: [3983] (in reverse order)
[2025-10-09 02:15:28] 2025-10-09 06:14:24,622 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 02:15:28] 2025-10-09 06:14:24,622 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 02:15:28] 2025-10-09 06:14:24,626 | INFO     | did not find any defunct processes belonging to 3983
[2025-10-09 02:15:28] 2025-10-09 06:14:24,629 | INFO     | did not find any defunct processes belonging to 3983
[2025-10-09 02:15:28] 2025-10-09 06:14:24,629 | INFO     | ready for new job
[2025-10-09 02:15:28] 2025-10-09 06:14:24,629 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 02:15:28] 2025-10-09 06:14:24,630 | INFO     | ***************************************
[2025-10-09 02:15:28] 2025-10-09 06:14:24,631 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 02:15:28] 2025-10-09 06:14:24,631 | INFO     | ***************************************
[2025-10-09 02:15:28] 2025-10-09 06:14:24,631 | INFO     | 
[2025-10-09 02:15:28] 2025-10-09 06:14:24,632 | INFO     | architecture information:
[2025-10-09 02:15:28] 2025-10-09 06:14:24,632 | INFO     | executing command: cat /etc/os-release
[2025-10-09 02:15:28] 2025-10-09 06:14:24,646 | INFO     | cat /etc/os-release:
[2025-10-09 02:15:28] NAME="CentOS Linux"
[2025-10-09 02:15:28] VERSION="7 (Core)"
[2025-10-09 02:15:28] ID="centos"
[2025-10-09 02:15:28] ID_LIKE="rhel fedora"
[2025-10-09 02:15:28] VERSION_ID="7"
[2025-10-09 02:15:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 02:15:28] ANSI_COLOR="0;31"
[2025-10-09 02:15:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 02:15:28] HOME_URL="https://www.centos.org/"
[2025-10-09 02:15:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 02:15:28] 
[2025-10-09 02:15:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 02:15:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 02:15:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 02:15:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 02:15:28] 
[2025-10-09 02:15:28] 2025-10-09 06:14:24,646 | INFO     | ***************************************
[2025-10-09 02:15:28] 2025-10-09 06:14:25,149 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-09 02:15:28] 2025-10-09 06:14:25,175 | INFO     | sufficient remaining disk space (28588376064 B)
[2025-10-09 02:15:28] 2025-10-09 06:14:25,175 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 02:15:28] 2025-10-09 06:14:25,175 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 02:15:28] 2025-10-09 06:14:25,176 | INFO     | update_server=False
[2025-10-09 02:15:28] 2025-10-09 06:14:25,176 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 02:15:28] 2025-10-09 06:14:25,176 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 02:15:28] 2025-10-09 06:14:25,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 02:15:28] 2025-10-09 06:14:25,177 | INFO     | aborting loop
[2025-10-09 02:15:28] 2025-10-09 06:14:25,564 | INFO     | all payload control threads have been joined
[2025-10-09 02:15:28] 2025-10-09 06:14:25,962 | INFO     | all data control threads have been joined
[2025-10-09 02:15:28] 2025-10-09 06:14:26,181 | INFO     | [job] retrieve thread has finished
[2025-10-09 02:15:28] 2025-10-09 06:14:26,182 | INFO     | [job] queue monitor thread has finished
[2025-10-09 02:15:28] 2025-10-09 06:14:26,182 | INFO     | [job] job monitor thread has finished
[2025-10-09 02:15:28] 2025-10-09 06:14:26,269 | INFO     | [payload] failed_post thread has finished
[2025-10-09 02:15:28] 2025-10-09 06:14:26,331 | INFO     | [job] validate thread has finished
[2025-10-09 02:15:28] 2025-10-09 06:14:26,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 02:15:28] 2025-10-09 06:14:26,433 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 02:15:28] 2025-10-09 06:14:26,474 | INFO     | all job control threads have been joined
[2025-10-09 02:15:28] 2025-10-09 06:14:26,570 | INFO     | [payload] control thread has finished
[2025-10-09 02:15:28] 2025-10-09 06:14:26,653 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 02:15:28] 2025-10-09 06:14:26,743 | INFO     | [payload] validate_post thread has finished
[2025-10-09 02:15:28] 2025-10-09 06:14:26,862 | INFO     | [data] copytool_in thread has finished
[2025-10-09 02:15:28] 2025-10-09 06:14:26,967 | INFO     | [data] control thread has finished
[2025-10-09 02:15:28] 2025-10-09 06:14:27,134 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 02:15:28] 2025-10-09 06:14:27,345 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 02:15:28] 2025-10-09 06:14:27,438 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 02:15:28] 2025-10-09 06:14:27,479 | INFO     | [job] control thread has finished
[2025-10-09 02:15:28] 2025-10-09 06:14:28,438 | INFO     | [data] copytool_out thread has finished
[2025-10-09 02:15:28] 2025-10-09 06:14:30,427 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 02:15:28] 2025-10-09 06:14:55,831 | INFO     | PID=20368 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 02:15:28] 2025-10-09 06:14:55,832 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 02:15:28] 2025-10-09 06:14:55,832 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 02:15:28] 2025-10-09 06:14:55,832 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 02:15:28] 2025-10-09 06:15:22,905 | INFO     | [monitor] cgroup control has ended
[2025-10-09 02:15:28] 2025-10-09 06:15:22,935 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140197743671104)>', '<ExcThread(monitor, started 140197312321280)>']
[2025-10-09 02:15:28] 2025-10-09 06:15:22,968 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 02:15:28] 2025-10-09 06:15:22,968 | INFO     | [monitor] control thread has ended
[2025-10-09 02:15:28] 2025-10-09 06:15:27,961 | INFO     | all workflow threads have been joined
[2025-10-09 02:15:28] 2025-10-09 06:15:27,961 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 02:15:28] 2025-10-09 06:15:27,961 | INFO     | traces error code: 0
[2025-10-09 02:15:28] 2025-10-09 06:15:27,961 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 02:15:28] 2025-10-09 06:15:28,044 [wrapper] ==== pilot stdout END ====
[2025-10-09 02:15:28] 2025-10-09 06:15:28,048 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 02:15:28] 2025-10-09 06:15:28,052 [wrapper] pilotpid: 20368
[2025-10-09 02:15:28] 2025-10-09 06:15:28,055 [wrapper] Pilot exit status: 0
[2025-10-09 02:15:28] 2025-10-09 06:15:28,067 [wrapper] pandaids: 6826566062
[2025-10-09 02:15:28] 2025-10-09 06:15:28,112 [wrapper] cleanup supervisor_pilot  2420 20369
[2025-10-09 02:15:28] 2025-10-09 06:15:28,115 [wrapper] Test setup, not cleaning
[2025-10-09 02:15:28] 2025-10-09 06:15:28,119 [wrapper] apfmon messages muted
[2025-10-09 02:15:28] 2025-10-09 06:15:28,122 [wrapper] ==== wrapper stdout END ====
[2025-10-09 02:15:28] 2025-10-09 06:15:28,126 [wrapper] ==== wrapper stderr END ====
[2025-10-09 02:15:28]  *** Error codes and diagnostics ***
[2025-10-09 02:15:28]     "exeErrorCode": 0,
[2025-10-09 02:15:28]     "exeErrorDiag": "",
[2025-10-09 02:15:28]     "pilotErrorCode": 0,
[2025-10-09 02:15:28]     "pilotErrorDiag": "",
[2025-10-09 02:15:28]  *** Listing of results directory ***
[2025-10-09 02:15:28] total 415032
[2025-10-09 02:15:28] -rw-r--r-- 1 boincer umatlas    552446 Oct  1 15:28 pilot3.tar.gz
[2025-10-09 02:15:28] -rwx------ 1 boincer umatlas     36292 Oct  1 15:47 runpilot2-wrapper.sh
[2025-10-09 02:15:28] -rw-r--r-- 1 boincer umatlas      5112 Oct  1 15:47 queuedata.json
[2025-10-09 02:15:28] -rw-r--r-- 1 boincer umatlas       100 Oct  8 22:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 02:15:28] -rwxr-xr-x 1 boincer umatlas      7986 Oct  8 22:47 run_atlas
[2025-10-09 02:15:28] -rw-r--r-- 1 boincer umatlas       105 Oct  8 22:47 job.xml
[2025-10-09 02:15:28] -rw-r--r-- 2 boincer umatlas 224053471 Oct  8 22:47 EVNT.46373045._002938.pool.root.1
[2025-10-09 02:15:28] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 22:47 start_atlas.sh
[2025-10-09 02:15:28] drwxrwx--x 2 boincer umatlas      4096 Oct  8 22:47 shared
[2025-10-09 02:15:28] -rw-r--r-- 2 boincer umatlas    565604 Oct  8 22:47 input.tar.gz
[2025-10-09 02:15:28] -rw-r--r-- 1 boincer umatlas         0 Oct  8 22:47 boinc_lockfile
[2025-10-09 02:15:28] -rw-r--r-- 1 boincer umatlas      2538 Oct  8 22:47 pandaJob.out
[2025-10-09 02:15:28] -rw------- 1 boincer umatlas    979306 Oct  8 22:48 agis_schedconf.cvmfs.json
[2025-10-09 02:15:28] drwx------ 4 boincer umatlas      4096 Oct  8 22:48 pilot3
[2025-10-09 02:15:28] -rw------- 1 boincer umatlas 192686261 Oct  9 02:13 HITS.46373048._086782.pool.root.1
[2025-10-09 02:15:28] -rw-r--r-- 1 boincer umatlas       530 Oct  9 02:13 boinc_task_state.xml
[2025-10-09 02:15:28] -rw-r--r-- 1 boincer umatlas      5952 Oct  9 02:13 init_data.xml
[2025-10-09 02:15:28] -rw------- 1 boincer umatlas      1051 Oct  9 02:14 memory_monitor_summary.json
[2025-10-09 02:15:28] -rw------- 1 boincer umatlas   1560401 Oct  9 02:14 agis_ddmendpoints.agis.ALL.json
[2025-10-09 02:15:28] -rw------- 1 boincer umatlas    446041 Oct  9 02:14 log.46373048._086782.job.log.tgz.1
[2025-10-09 02:15:28] -rw------- 1 boincer umatlas      7856 Oct  9 02:14 heartbeat.json
[2025-10-09 02:15:28] -rw------- 1 boincer umatlas        95 Oct  9 02:14 pilot_heartbeat.json
[2025-10-09 02:15:28] -rw-r--r-- 1 boincer umatlas        28 Oct  9 02:14 wrapper_checkpoint.txt
[2025-10-09 02:15:28] -rw-r--r-- 1 boincer umatlas      8192 Oct  9 02:14 boinc_mmap_file
[2025-10-09 02:15:28] -rw------- 1 boincer umatlas      4746 Oct  9 02:15 pilotlog.txt
[2025-10-09 02:15:28] -rw------- 1 boincer umatlas   1731183 Oct  9 02:15 log.46373048._086782.job.log.1
[2025-10-09 02:15:28] -rw------- 1 boincer umatlas       357 Oct  9 02:15 output.list
[2025-10-09 02:15:28] -rw-r--r-- 1 boincer umatlas       620 Oct  9 02:15 runtime_log
[2025-10-09 02:15:28] -rw------- 1 boincer umatlas   2201600 Oct  9 02:15 result.tar.gz
[2025-10-09 02:15:28] -rw------- 1 boincer umatlas       661 Oct  9 02:15 xFZNDmTyHO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOlCNDm2HTyvn.diag
[2025-10-09 02:15:28] -rw-r--r-- 1 boincer umatlas      8704 Oct  9 02:15 runtime_log.err
[2025-10-09 02:15:28] -rw-r--r-- 1 boincer umatlas     20867 Oct  9 02:15 stderr.txt
[2025-10-09 02:15:28] HITS file was successfully produced:
[2025-10-09 02:15:28] -rw------- 1 boincer umatlas 192686261 Oct  9 02:13 shared/HITS.pool.root.1
[2025-10-09 02:15:28]  *** Contents of shared directory: ***
[2025-10-09 02:15:28] total 409708
[2025-10-09 02:15:28] -rw-r--r-- 2 boincer umatlas 224053471 Oct  8 22:47 ATLAS.root_0
[2025-10-09 02:15:28] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 22:47 start_atlas.sh
[2025-10-09 02:15:28] -rw-r--r-- 2 boincer umatlas    565604 Oct  8 22:47 input.tar.gz
[2025-10-09 02:15:28] -rw------- 1 boincer umatlas 192686261 Oct  9 02:13 HITS.pool.root.1
[2025-10-09 02:15:28] -rw------- 1 boincer umatlas   2201600 Oct  9 02:15 result.tar.gz
02:15:30 (12938): run_atlas exited; CPU time 94951.127840
02:15:30 (12938): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN