Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:41:09 (3568387): wrapper (7.7.26015): starting
04:41:09 (3568387): wrapper: running run_atlas (--nthreads 4)
[2025-10-09 04:41:09] Arguments: --nthreads 4
[2025-10-09 04:41:09] Threads: 4
[2025-10-09 04:41:09] Checking for CVMFS
[2025-10-09 04:41:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 04:41:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 04:41:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 04:41:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 04:41:13] 2.9.2.0 3568582 0 30056 151493 3 1 21969805 36864001 0 130560 0 0 0.000 1291 943 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-09 04:41:13] CVMFS is ok
[2025-10-09 04:41:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 04:41:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 04:41:13] Further information can be found at the LHC@home message board.
[2025-10-09 04:41:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 04:41:13] Checking for apptainer binary...
[2025-10-09 04:41:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 04:41:13] Running /usr/bin/apptainer --version
[2025-10-09 04:41:13] apptainer version 1.4.1-1.1
[2025-10-09 04:41:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 04:41:13] thA352
[2025-10-09 04:41:13] apptainer works
[2025-10-09 04:41:13] Set ATHENA_PROC_NUMBER=4
[2025-10-09 04:41:13] Set ATHENA_CORE_NUMBER=4
[2025-10-09 04:41:13] Starting ATLAS job with PandaID=6831125673
[2025-10-09 04:41:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 05:46:46]  *** The last 200 lines of the pilot log: ***
[2025-10-09 05:46:46]  is_tar=False
[2025-10-09 05:46:46]  lfn=log.46376905._079909.job.log.tgz.1
[2025-10-09 05:46:46]  mtime=0
[2025-10-09 05:46:46]  protocol_id=None
[2025-10-09 05:46:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-09 05:46:46]  replicas=None
[2025-10-09 05:46:46]  scope=mc23_13p6TeV
[2025-10-09 05:46:46]  status=None
[2025-10-09 05:46:46]  status_code=0
[2025-10-09 05:46:46]  storage_token=
[2025-10-09 05:46:46]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6831125673/log.46376905._079909.job.log.tgz.1
[2025-10-09 05:46:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/52/log.46376905._079909.job.log.tgz.1
[2025-10-09 05:46:46]  workdir=None
[2025-10-09 05:46:46] ]
[2025-10-09 05:46:46] 2025-10-09 03:46:10,113 | INFO     | transferring file log.46376905._079909.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6831125673/log.46376905._079909.job.log.tgz.1 to /local/data/boinc/
[2025-10-09 05:46:46] 2025-10-09 03:46:10,114 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6831125673/log.46376905._079909.job.log.tgz.1 /local/data/boinc/slots/0/log.46376905._0799
[2025-10-09 05:46:46] 2025-10-09 03:46:10,133 | INFO     | adding to output.list: log.46376905._079909.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/52/log.46376905._079909.job.log.tg
[2025-10-09 05:46:46] 2025-10-09 03:46:10,133 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-09 05:46:46] 2025-10-09 03:46:10,133 | INFO     | summary of transferred files:
[2025-10-09 05:46:46] 2025-10-09 03:46:10,133 | INFO     |  -- lfn=log.46376905._079909.job.log.tgz.1, status_code=0, status=transferred
[2025-10-09 05:46:46] 2025-10-09 03:46:10,133 | INFO     | stage-out finished correctly
[2025-10-09 05:46:46] 2025-10-09 03:46:10,172 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 05:46:46] 2025-10-09 03:46:10,211 | INFO     | job 6831125673 has state=finished
[2025-10-09 05:46:46] 2025-10-09 03:46:10,211 | INFO     | preparing for final server update for job 6831125673 in state='finished'
[2025-10-09 05:46:46] 2025-10-09 03:46:10,211 | INFO     | this job has now completed (state=finished)
[2025-10-09 05:46:46] 2025-10-09 03:46:10,211 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 05:46:46] 2025-10-09 03:46:10,211 | INFO     | log transfer has been attempted: DONE
[2025-10-09 05:46:46] 2025-10-09 03:46:10,212 | INFO     | job 6831125673 has finished - writing final server update
[2025-10-09 05:46:46] 2025-10-09 03:46:10,212 | INFO     | total number of processed events: 400 (read)
[2025-10-09 05:46:46] 2025-10-09 03:46:10,212 | INFO     | executing command: lscpu
[2025-10-09 05:46:46] 2025-10-09 03:46:10,231 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 05:46:46] 2025-10-09 03:46:11,597 | INFO     | time since job start (3885s) is within the limit (172800.0s)
[2025-10-09 05:46:46] 2025-10-09 03:46:12,149 | INFO     | monitor loop #300: job 0:6831125673 is in state 'finished'
[2025-10-09 05:46:46] 2025-10-09 03:46:12,149 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 05:46:46] 2025-10-09 03:46:13,602 | INFO     | time since job start (3887s) is within the limit (172800.0s)
[2025-10-09 05:46:46] 2025-10-09 03:46:13,900 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-09 05:46:46] 2025-10-09 03:46:13,901 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3373.40975
[2025-10-09 05:46:46] 2025-10-09 03:46:13,903 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6831125673/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 05:46:46] 2025-10-09 03:46:13,903 | INFO     | extracted standard info from prmon json
[2025-10-09 05:46:46] 2025-10-09 03:46:13,903 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 05:46:46] 2025-10-09 03:46:13,903 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 05:46:46] 2025-10-09 03:46:13,903 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 05:46:46] 2025-10-09 03:46:13,903 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 05:46:46] 2025-10-09 03:46:13,904 | INFO     | fitting pss+swap vs Time
[2025-10-09 05:46:46] 2025-10-09 03:46:13,904 | INFO     | sum of square deviations: 57407344.98245609
[2025-10-09 05:46:46] 2025-10-09 03:46:13,904 | INFO     | sum of deviations: -9217078907.491232
[2025-10-09 05:46:46] 2025-10-09 03:46:13,904 | INFO     | mean x: 1759979723.0175438
[2025-10-09 05:46:46] 2025-10-09 03:46:13,904 | INFO     | mean y: 2571591.49122807
[2025-10-09 05:46:46] 2025-10-09 03:46:13,904 | INFO     | -- intersect: 282577423077.738
[2025-10-09 05:46:46] 2025-10-09 03:46:13,904 | INFO     | intersect: 282577423077.738
[2025-10-09 05:46:46] 2025-10-09 03:46:13,904 | INFO     | chi2: 0.09937232524557717
[2025-10-09 05:46:46] 2025-10-09 03:46:13,904 | INFO     | -- intersect: 282577423077.738
[2025-10-09 05:46:46] 2025-10-09 03:46:13,904 | INFO     | current memory leak: -160.56 B/s (using 57 data points, chi2=0.10)
[2025-10-09 05:46:46] 2025-10-09 03:46:13,904 | INFO     | could have reported an average CPU frequency of 3642 MHz (6 samples)
[2025-10-09 05:46:46] 2025-10-09 03:46:13,905 | INFO     | ..............................
[2025-10-09 05:46:46] 2025-10-09 03:46:13,905 | INFO     | . Timing measurements:
[2025-10-09 05:46:46] 2025-10-09 03:46:13,905 | INFO     | . get job = 0 s
[2025-10-09 05:46:46] 2025-10-09 03:46:13,905 | INFO     | . initial setup = 1 s
[2025-10-09 05:46:46] 2025-10-09 03:46:13,905 | INFO     | . payload setup = 4 s
[2025-10-09 05:46:46] 2025-10-09 03:46:13,905 | INFO     | . stage-in = 0 s
[2025-10-09 05:46:46] 2025-10-09 03:46:13,905 | INFO     | . payload execution = 3861 s
[2025-10-09 05:46:46] 2025-10-09 03:46:13,905 | INFO     | . stage-out = 0 s
[2025-10-09 05:46:46] 2025-10-09 03:46:13,905 | INFO     | . log creation = 0 s
[2025-10-09 05:46:46] 2025-10-09 03:46:13,905 | INFO     | ..............................
[2025-10-09 05:46:46] 2025-10-09 03:46:13,984 | INFO     | 
[2025-10-09 05:46:46] 2025-10-09 03:46:13,984 | INFO     | job summary report
[2025-10-09 05:46:46] 2025-10-09 03:46:13,984 | INFO     | --------------------------------------------------
[2025-10-09 05:46:46] 2025-10-09 03:46:13,984 | INFO     | PanDA job id: 6831125673
[2025-10-09 05:46:46] 2025-10-09 03:46:13,984 | INFO     | task id: 46376905
[2025-10-09 05:46:46] 2025-10-09 03:46:13,984 | INFO     | errors: (none)
[2025-10-09 05:46:46] 2025-10-09 03:46:13,984 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 05:46:46] 2025-10-09 03:46:13,984 | INFO     | pilot state: finished 
[2025-10-09 05:46:46] 2025-10-09 03:46:13,984 | INFO     | transexitcode: 0
[2025-10-09 05:46:46] 2025-10-09 03:46:13,984 | INFO     | exeerrorcode: 0
[2025-10-09 05:46:46] 2025-10-09 03:46:13,984 | INFO     | exeerrordiag: 
[2025-10-09 05:46:46] 2025-10-09 03:46:13,984 | INFO     | exitcode: 0
[2025-10-09 05:46:46] 2025-10-09 03:46:13,984 | INFO     | exitmsg: OK
[2025-10-09 05:46:46] 2025-10-09 03:46:13,984 | INFO     | cpuconsumptiontime: 14509 s
[2025-10-09 05:46:46] 2025-10-09 03:46:13,984 | INFO     | nevents: 400
[2025-10-09 05:46:46] 2025-10-09 03:46:13,984 | INFO     | neventsw: 0
[2025-10-09 05:46:46] 2025-10-09 03:46:13,985 | INFO     | pid: 3579278
[2025-10-09 05:46:46] 2025-10-09 03:46:13,985 | INFO     | pgrp: 3579278
[2025-10-09 05:46:46] 2025-10-09 03:46:13,985 | INFO     | corecount: 4
[2025-10-09 05:46:46] 2025-10-09 03:46:13,985 | INFO     | event service: False
[2025-10-09 05:46:46] 2025-10-09 03:46:13,985 | INFO     | sizes: {0: 2348819, 4: 2349081, 11: 2349109, 3869: 2375056, 3870: 2384116, 3874: 2384254}
[2025-10-09 05:46:46] 2025-10-09 03:46:13,985 | INFO     | --------------------------------------------------
[2025-10-09 05:46:46] 2025-10-09 03:46:13,985 | INFO     | 
[2025-10-09 05:46:46] 2025-10-09 03:46:13,985 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-09 05:46:46] 2025-10-09 03:46:14,006 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,007 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 05:46:46] 2025-10-09 03:46:14,008 | INFO     | job 6831125673 has completed (purged errors)
[2025-10-09 05:46:46] 2025-10-09 03:46:14,008 | INFO     | overall cleanup function is called
[2025-10-09 05:46:46] 2025-10-09 03:46:15,014 | INFO     | --- collectZombieJob: --- 10, [3579278]
[2025-10-09 05:46:46] 2025-10-09 03:46:15,015 | INFO     | zombie collector waiting for pid 3579278
[2025-10-09 05:46:46] 2025-10-09 03:46:15,015 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 05:46:46] 2025-10-09 03:46:15,015 | INFO     | collected zombie processes
[2025-10-09 05:46:46] 2025-10-09 03:46:15,015 | INFO     | will attempt to kill all subprocesses of pid=3579278
[2025-10-09 05:46:46] 2025-10-09 03:46:15,059 | INFO     | process IDs to be killed: [3579278] (in reverse order)
[2025-10-09 05:46:46] 2025-10-09 03:46:15,092 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 05:46:46] 2025-10-09 03:46:15,093 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 05:46:46] 2025-10-09 03:46:15,095 | INFO     | did not find any defunct processes belonging to 3579278
[2025-10-09 05:46:46] 2025-10-09 03:46:15,096 | INFO     | did not find any defunct processes belonging to 3579278
[2025-10-09 05:46:46] 2025-10-09 03:46:15,096 | INFO     | ready for new job
[2025-10-09 05:46:46] 2025-10-09 03:46:15,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 05:46:46] 2025-10-09 03:46:15,097 | INFO     | ***************************************
[2025-10-09 05:46:46] 2025-10-09 03:46:15,097 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 05:46:46] 2025-10-09 03:46:15,097 | INFO     | ***************************************
[2025-10-09 05:46:46] 2025-10-09 03:46:15,097 | INFO     | 
[2025-10-09 05:46:46] 2025-10-09 03:46:15,097 | INFO     | architecture information:
[2025-10-09 05:46:46] 2025-10-09 03:46:15,098 | INFO     | executing command: cat /etc/os-release
[2025-10-09 05:46:46] 2025-10-09 03:46:15,112 | INFO     | cat /etc/os-release:
[2025-10-09 05:46:46] NAME="CentOS Linux"
[2025-10-09 05:46:46] VERSION="7 (Core)"
[2025-10-09 05:46:46] ID="centos"
[2025-10-09 05:46:46] ID_LIKE="rhel fedora"
[2025-10-09 05:46:46] VERSION_ID="7"
[2025-10-09 05:46:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 05:46:46] ANSI_COLOR="0;31"
[2025-10-09 05:46:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 05:46:46] HOME_URL="https://www.centos.org/"
[2025-10-09 05:46:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 05:46:46] 
[2025-10-09 05:46:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 05:46:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 05:46:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 05:46:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 05:46:46] 
[2025-10-09 05:46:46] 2025-10-09 03:46:15,112 | INFO     | ***************************************
[2025-10-09 05:46:46] 2025-10-09 03:46:15,615 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-09 05:46:46] 2025-10-09 03:46:15,633 | INFO     | sufficient remaining disk space (239082668032 B)
[2025-10-09 05:46:46] 2025-10-09 03:46:15,634 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 05:46:46] 2025-10-09 03:46:15,634 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 05:46:46] 2025-10-09 03:46:15,634 | INFO     | update_server=False
[2025-10-09 05:46:46] 2025-10-09 03:46:15,634 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 05:46:46] 2025-10-09 03:46:15,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 05:46:46] 2025-10-09 03:46:15,658 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 05:46:46] 2025-10-09 03:46:15,658 | INFO     | aborting loop
[2025-10-09 05:46:46] 2025-10-09 03:46:15,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 05:46:46] 2025-10-09 03:46:16,204 | INFO     | all payload control threads have been joined
[2025-10-09 05:46:46] 2025-10-09 03:46:16,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 05:46:46] 2025-10-09 03:46:16,639 | INFO     | [job] retrieve thread has finished
[2025-10-09 05:46:46] 2025-10-09 03:46:16,640 | INFO     | [job] queue monitor thread has finished
[2025-10-09 05:46:46] 2025-10-09 03:46:16,657 | INFO     | all data control threads have been joined
[2025-10-09 05:46:46] 2025-10-09 03:46:16,664 | INFO     | [job] job monitor thread has finished
[2025-10-09 05:46:46] 2025-10-09 03:46:16,752 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 05:46:46] 2025-10-09 03:46:16,754 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 05:46:46] 2025-10-09 03:46:16,909 | INFO     | all job control threads have been joined
[2025-10-09 05:46:46] 2025-10-09 03:46:17,194 | INFO     | [payload] validate_post thread has finished
[2025-10-09 05:46:46] 2025-10-09 03:46:17,209 | INFO     | [payload] control thread has finished
[2025-10-09 05:46:46] 2025-10-09 03:46:17,353 | INFO     | [data] copytool_in thread has finished
[2025-10-09 05:46:46] 2025-10-09 03:46:17,663 | INFO     | [data] control thread has finished
[2025-10-09 05:46:46] 2025-10-09 03:46:17,687 | INFO     | [data] copytool_out thread has finished
[2025-10-09 05:46:46] 2025-10-09 03:46:17,915 | INFO     | [job] control thread has finished
[2025-10-09 05:46:46] 2025-10-09 03:46:18,008 | INFO     | [payload] failed_post thread has finished
[2025-10-09 05:46:46] 2025-10-09 03:46:18,074 | INFO     | [job] validate thread has finished
[2025-10-09 05:46:46] 2025-10-09 03:46:18,129 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 05:46:46] 2025-10-09 03:46:20,224 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 05:46:46] 2025-10-09 03:46:25,736 | INFO     | job.realtimelogging is not enabled
[2025-10-09 05:46:46] 2025-10-09 03:46:26,742 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 05:46:46] 2025-10-09 03:46:31,283 | INFO     | [monitor] cgroup control has ended
[2025-10-09 05:46:46] 2025-10-09 03:46:32,153 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139915983595328)>', '<ExcThread(monitor, started 139915186657024)>']
[2025-10-09 05:46:46] 2025-10-09 03:46:37,169 | INFO     | all workflow threads have been joined
[2025-10-09 05:46:46] 2025-10-09 03:46:37,169 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 05:46:46] 2025-10-09 03:46:37,170 | INFO     | traces error code: 0
[2025-10-09 05:46:46] 2025-10-09 03:46:37,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 05:46:46] 2025-10-09 03:46:46,731 | INFO     | PID=3572714 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 05:46:46] 2025-10-09 03:46:46,731 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 05:46:46] 2025-10-09 03:46:46,731 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 05:46:46] 2025-10-09 03:46:46,731 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 05:46:46] 2025-10-09 03:46:46,731 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 05:46:46] 2025-10-09 03:46:46,731 | CRITICAL | thread 'MainThread' is not alive
[2025-10-09 05:46:46] 2025-10-09 03:46:46,731 | INFO     | [monitor] control thread has ended
[2025-10-09 05:46:46] 2025-10-09 03:46:46,807 [wrapper] ==== pilot stdout END ====
[2025-10-09 05:46:46] 2025-10-09 03:46:46,812 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 05:46:46] 2025-10-09 03:46:46,816 [wrapper] pilotpid: 3572714
[2025-10-09 05:46:46] 2025-10-09 03:46:46,820 [wrapper] Pilot exit status: 0
[2025-10-09 05:46:46] 2025-10-09 03:46:46,833 [wrapper] pandaids: 6831125673
[2025-10-09 05:46:46] 2025-10-09 03:46:46,855 [wrapper] cleanup supervisor_pilot 3589214 3572715
[2025-10-09 05:46:46] 2025-10-09 03:46:46,860 [wrapper] Test setup, not cleaning
[2025-10-09 05:46:46] 2025-10-09 03:46:46,864 [wrapper] apfmon messages muted
[2025-10-09 05:46:46] 2025-10-09 03:46:46,868 [wrapper] ==== wrapper stdout END ====
[2025-10-09 05:46:46] 2025-10-09 03:46:46,872 [wrapper] ==== wrapper stderr END ====
[2025-10-09 05:46:46]  *** Error codes and diagnostics ***
[2025-10-09 05:46:46]     "exeErrorCode": 0,
[2025-10-09 05:46:46]     "exeErrorDiag": "",
[2025-10-09 05:46:46]     "pilotErrorCode": 0,
[2025-10-09 05:46:46]     "pilotErrorDiag": "",
[2025-10-09 05:46:46]  *** Listing of results directory ***
[2025-10-09 05:46:46] total 388868
[2025-10-09 05:46:46] -rw-r--r-- 1 boinc boinc    552446 Oct  5 10:27 pilot3.tar.gz
[2025-10-09 05:46:46] -rw-r--r-- 1 boinc boinc      5112 Oct  5 10:35 queuedata.json
[2025-10-09 05:46:46] -rwx------ 1 boinc boinc     36292 Oct  5 10:37 runpilot2-wrapper.sh
[2025-10-09 05:46:46] -rw-r--r-- 1 boinc boinc       100 Oct  9 04:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 05:46:46] -rwxr-xr-x 1 boinc boinc      7986 Oct  9 04:41 run_atlas
[2025-10-09 05:46:46] -rw-r--r-- 1 boinc boinc       105 Oct  9 04:41 job.xml
[2025-10-09 05:46:46] -rw-r--r-- 2 boinc boinc 214029516 Oct  9 04:41 EVNT.46376901._002924.pool.root.1
[2025-10-09 05:46:46] -rw-r--r-- 2 boinc boinc    565605 Oct  9 04:41 input.tar.gz
[2025-10-09 05:46:46] -rw-r--r-- 2 boinc boinc     15120 Oct  9 04:41 start_atlas.sh
[2025-10-09 05:46:46] drwxrwx--x 2 boinc boinc      4096 Oct  9 04:41 shared
[2025-10-09 05:46:46] -rw-r--r-- 1 boinc boinc         0 Oct  9 04:41 boinc_setup_complete
[2025-10-09 05:46:46] -rw-r--r-- 1 boinc boinc      6371 Oct  9 04:41 init_data.xml
[2025-10-09 05:46:46] -rw-r--r-- 1 boinc boinc         0 Oct  9 04:41 boinc_lockfile
[2025-10-09 05:46:46] -rw-r--r-- 1 boinc boinc      2519 Oct  9 04:41 pandaJob.out
[2025-10-09 05:46:46] -rw------- 1 boinc boinc    979306 Oct  9 04:41 agis_schedconf.cvmfs.json
[2025-10-09 05:46:46] -rw------- 1 boinc boinc   1560401 Oct  9 04:41 agis_ddmendpoints.agis.ALL.json
[2025-10-09 05:46:46] drwx------ 4 boinc boinc      4096 Oct  9 04:41 pilot3
[2025-10-09 05:46:46] -rw------- 1 boinc boinc 178599585 Oct  9 05:45 HITS.46376905._079909.pool.root.1
[2025-10-09 05:46:46] -rw-r--r-- 1 boinc boinc       529 Oct  9 05:45 boinc_task_state.xml
[2025-10-09 05:46:46] -rw------- 1 boinc boinc      1016 Oct  9 05:46 memory_monitor_summary.json
[2025-10-09 05:46:46] -rw------- 1 boinc boinc    259290 Oct  9 05:46 log.46376905._079909.job.log.tgz.1
[2025-10-09 05:46:46] -rw------- 1 boinc boinc      7760 Oct  9 05:46 heartbeat.json
[2025-10-09 05:46:46] -rw-r--r-- 1 boinc boinc      8192 Oct  9 05:46 boinc_mmap_file
[2025-10-09 05:46:46] -rw-r--r-- 1 boinc boinc        27 Oct  9 05:46 wrapper_checkpoint.txt
[2025-10-09 05:46:46] -rw------- 1 boinc boinc       817 Oct  9 05:46 pilotlog.txt
[2025-10-09 05:46:46] -rw------- 1 boinc boinc        95 Oct  9 05:46 pilot_heartbeat.json
[2025-10-09 05:46:46] -rw------- 1 boinc boinc    580483 Oct  9 05:46 log.46376905._079909.job.log.1
[2025-10-09 05:46:46] -rw------- 1 boinc boinc       357 Oct  9 05:46 output.list
[2025-10-09 05:46:46] -rw-r--r-- 1 boinc boinc       620 Oct  9 05:46 runtime_log
[2025-10-09 05:46:46] -rw------- 1 boinc boinc    860160 Oct  9 05:46 result.tar.gz
[2025-10-09 05:46:46] -rw-r--r-- 1 boinc boinc      8777 Oct  9 05:46 runtime_log.err
[2025-10-09 05:46:46] -rw------- 1 boinc boinc       658 Oct  9 05:46 RHkLDmOQZP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJcONDm7cLn7n.diag
[2025-10-09 05:46:46] -rw-r--r-- 1 boinc boinc     21458 Oct  9 05:46 stderr.txt
[2025-10-09 05:46:46] HITS file was successfully produced:
[2025-10-09 05:46:46] -rw------- 1 boinc boinc 178599585 Oct  9 05:45 shared/HITS.pool.root.1
[2025-10-09 05:46:46]  *** Contents of shared directory: ***
[2025-10-09 05:46:46] total 384852
[2025-10-09 05:46:46] -rw-r--r-- 2 boinc boinc 214029516 Oct  9 04:41 ATLAS.root_0
[2025-10-09 05:46:46] -rw-r--r-- 2 boinc boinc    565605 Oct  9 04:41 input.tar.gz
[2025-10-09 05:46:46] -rw-r--r-- 2 boinc boinc     15120 Oct  9 04:41 start_atlas.sh
[2025-10-09 05:46:46] -rw------- 1 boinc boinc 178599585 Oct  9 05:45 HITS.pool.root.1
[2025-10-09 05:46:46] -rw------- 1 boinc boinc    860160 Oct  9 05:46 result.tar.gz
05:46:48 (3568387): run_atlas exited; CPU time 14516.811428
05:46:48 (3568387): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN