Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:35:17 (14641): wrapper (7.7.26015): starting
22:35:17 (14641): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 22:35:17] Arguments: --nthreads 8
[2025-10-08 22:35:17] Threads: 8
[2025-10-08 22:35:17] Checking for CVMFS
[2025-10-08 22:35:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 22:35:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 22:35:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 22:35:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 22:35:18] 2.11.2.0 2857 217969 114580 151493 0 59 19547948 20275201 1 130560 1 75540222 99.974 14186919 12325 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 22:35:18] CVMFS is ok
[2025-10-08 22:35:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 22:35:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 22:35:18] Further information can be found at the LHC@home message board.
[2025-10-08 22:35:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 22:35:18] Checking for apptainer binary...
[2025-10-08 22:35:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 22:35:18] Running /usr/bin/apptainer --version
[2025-10-08 22:35:18] apptainer version 1.3.2-1.el7
[2025-10-08 22:35:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 22:35:20] c-204-22.aglt2.org
[2025-10-08 22:35:20] apptainer works
[2025-10-08 22:35:20] Set ATHENA_PROC_NUMBER=8
[2025-10-08 22:35:20] Set ATHENA_CORE_NUMBER=8
[2025-10-08 22:35:20] Starting ATLAS job with PandaID=6830895362
[2025-10-08 22:35:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 00:26:54]  *** The last 200 lines of the pilot log: ***
[2025-10-09 00:26:54] 2025-10-09 04:26:07,792 | INFO     | monitor loop #493: job 0:6830895362 is in state 'finished'
[2025-10-09 00:26:54] 2025-10-09 04:26:07,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 00:26:54] 2025-10-09 04:26:08,165 | INFO     | time since job start (6630s) is within the limit (172800.0s)
[2025-10-09 00:26:54] 2025-10-09 04:26:09,026 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-09 00:26:54] 2025-10-09 04:26:09,030 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1762.375
[2025-10-09 00:26:54] 2025-10-09 04:26:09,032 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6830895362/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 00:26:54] 2025-10-09 04:26:09,033 | INFO     | extracted standard info from prmon json
[2025-10-09 00:26:54] 2025-10-09 04:26:09,033 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 00:26:54] 2025-10-09 04:26:09,033 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 00:26:54] 2025-10-09 04:26:09,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 00:26:54] 2025-10-09 04:26:09,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 00:26:54] 2025-10-09 04:26:09,037 | INFO     | fitting pss+swap vs Time
[2025-10-09 00:26:54] 2025-10-09 04:26:09,037 | INFO     | sum of square deviations: 390582207.0
[2025-10-09 00:26:54] 2025-10-09 04:26:09,038 | INFO     | sum of deviations: -1805556995.0000017
[2025-10-09 00:26:54] 2025-10-09 04:26:09,038 | INFO     | mean x: 1759980633.5
[2025-10-09 00:26:54] 2025-10-09 04:26:09,039 | INFO     | mean y: 2530000.2592592593
[2025-10-09 00:26:54] 2025-10-09 04:26:09,039 | INFO     | -- intersect: 8138449371.211196
[2025-10-09 00:26:54] 2025-10-09 04:26:09,039 | INFO     | intersect: 8138449371.211196
[2025-10-09 00:26:54] 2025-10-09 04:26:09,039 | INFO     | chi2: 1.632219694594546
[2025-10-09 00:26:54] 2025-10-09 04:26:09,040 | INFO     | sum of square deviations: 338804492.0
[2025-10-09 00:26:54] 2025-10-09 04:26:09,040 | INFO     | sum of deviations: -1182629509.0000024
[2025-10-09 00:26:54] 2025-10-09 04:26:09,040 | INFO     | mean x: 1759980481.0
[2025-10-09 00:26:54] 2025-10-09 04:26:09,040 | INFO     | mean y: 2531836.330097087
[2025-10-09 00:26:54] 2025-10-09 04:26:09,040 | INFO     | -- intersect: 6145912166.997666
[2025-10-09 00:26:54] 2025-10-09 04:26:09,041 | INFO     | intersect: 6145912166.997666
[2025-10-09 00:26:54] 2025-10-09 04:26:09,041 | INFO     | chi2: 1.6343808360530563
[2025-10-09 00:26:54] 2025-10-09 04:26:09,041 | INFO     | current chi2=1.6343808360530563 (change=-0.13240505954360265 %)
[2025-10-09 00:26:54] 2025-10-09 04:26:09,041 | INFO     | right removable region: 102
[2025-10-09 00:26:54] 2025-10-09 04:26:09,041 | INFO     | sum of square deviations: 338804492.0
[2025-10-09 00:26:54] 2025-10-09 04:26:09,042 | INFO     | sum of deviations: -18159644795.000004
[2025-10-09 00:26:54] 2025-10-09 04:26:09,042 | INFO     | mean x: 1759980786.0
[2025-10-09 00:26:54] 2025-10-09 04:26:09,042 | INFO     | mean y: 2577152.203883495
[2025-10-09 00:26:54] 2025-10-09 04:26:09,042 | INFO     | -- intersect: 94336113673.86522
[2025-10-09 00:26:54] 2025-10-09 04:26:09,042 | INFO     | intersect: 94336113673.86522
[2025-10-09 00:26:54] 2025-10-09 04:26:09,042 | INFO     | chi2: 0.11381005842581514
[2025-10-09 00:26:54] 2025-10-09 04:26:09,043 | INFO     | current chi2=0.11381005842581514 (change=93.02728310393987 %)
[2025-10-09 00:26:54] 2025-10-09 04:26:09,043 | INFO     | sum of square deviations: 291817564.5
[2025-10-09 00:26:54] 2025-10-09 04:26:09,043 | INFO     | sum of deviations: -16968157018.5
[2025-10-09 00:26:54] 2025-10-09 04:26:09,043 | INFO     | mean x: 1759980938.5
[2025-10-09 00:26:54] 2025-10-09 04:26:09,044 | INFO     | mean y: 2573151.1326530613
[2025-10-09 00:26:54] 2025-10-09 04:26:09,044 | INFO     | -- intersect: 102339226413.26004
[2025-10-09 00:26:54] 2025-10-09 04:26:09,044 | INFO     | intersect: 102339226413.26004
[2025-10-09 00:26:54] 2025-10-09 04:26:09,044 | INFO     | chi2: 0.09845234327497683
[2025-10-09 00:26:54] 2025-10-09 04:26:09,044 | INFO     | current chi2=0.09845234327497683 (change=13.494163313209203 %)
[2025-10-09 00:26:54] 2025-10-09 04:26:09,044 | INFO     | left removable region: 20
[2025-10-09 00:26:54] 2025-10-09 04:26:09,045 | INFO     | sum of square deviations: 170944600.5
[2025-10-09 00:26:54] 2025-10-09 04:26:09,045 | INFO     | sum of deviations: -10411321552.500002
[2025-10-09 00:26:54] 2025-10-09 04:26:09,045 | INFO     | mean x: 1759981060.5
[2025-10-09 00:26:54] 2025-10-09 04:26:09,045 | INFO     | mean y: 2556222.573170732
[2025-10-09 00:26:54] 2025-10-09 04:26:09,045 | INFO     | -- intersect: 107193591760.28505
[2025-10-09 00:26:54] 2025-10-09 04:26:09,045 | INFO     | intersect: 107193591760.28505
[2025-10-09 00:26:54] 2025-10-09 04:26:09,046 | INFO     | chi2: 0.08931954527215719
[2025-10-09 00:26:54] 2025-10-09 04:26:09,046 | INFO     | -- intersect: 107193591760.28505
[2025-10-09 00:26:54] 2025-10-09 04:26:09,046 | INFO     | current memory leak: -60.90 B/s (using 82 data points, chi2=0.09)
[2025-10-09 00:26:54] 2025-10-09 04:26:09,046 | INFO     | could have reported an average CPU frequency of 1959 MHz (7 samples)
[2025-10-09 00:26:54] 2025-10-09 04:26:09,047 | INFO     | ..............................
[2025-10-09 00:26:54] 2025-10-09 04:26:09,047 | INFO     | . Timing measurements:
[2025-10-09 00:26:54] 2025-10-09 04:26:09,047 | INFO     | . get job = 0 s
[2025-10-09 00:26:54] 2025-10-09 04:26:09,047 | INFO     | . initial setup = 2 s
[2025-10-09 00:26:54] 2025-10-09 04:26:09,047 | INFO     | . payload setup = 8 s
[2025-10-09 00:26:54] 2025-10-09 04:26:09,047 | INFO     | . stage-in = 0 s
[2025-10-09 00:26:54] 2025-10-09 04:26:09,047 | INFO     | . payload execution = 6590 s
[2025-10-09 00:26:54] 2025-10-09 04:26:09,047 | INFO     | . stage-out = 0 s
[2025-10-09 00:26:54] 2025-10-09 04:26:09,048 | INFO     | . log creation = 0 s
[2025-10-09 00:26:54] 2025-10-09 04:26:09,048 | INFO     | ..............................
[2025-10-09 00:26:54] 2025-10-09 04:26:09,138 | INFO     | 
[2025-10-09 00:26:54] 2025-10-09 04:26:09,138 | INFO     | job summary report
[2025-10-09 00:26:54] 2025-10-09 04:26:09,138 | INFO     | --------------------------------------------------
[2025-10-09 00:26:54] 2025-10-09 04:26:09,138 | INFO     | PanDA job id: 6830895362
[2025-10-09 00:26:54] 2025-10-09 04:26:09,139 | INFO     | task id: 46376905
[2025-10-09 00:26:54] 2025-10-09 04:26:09,139 | INFO     | errors: (none)
[2025-10-09 00:26:54] 2025-10-09 04:26:09,139 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 00:26:54] 2025-10-09 04:26:09,139 | INFO     | pilot state: finished 
[2025-10-09 00:26:54] 2025-10-09 04:26:09,139 | INFO     | transexitcode: 0
[2025-10-09 00:26:54] 2025-10-09 04:26:09,139 | INFO     | exeerrorcode: 0
[2025-10-09 00:26:54] 2025-10-09 04:26:09,139 | INFO     | exeerrordiag: 
[2025-10-09 00:26:54] 2025-10-09 04:26:09,140 | INFO     | exitcode: 0
[2025-10-09 00:26:54] 2025-10-09 04:26:09,140 | INFO     | exitmsg: OK
[2025-10-09 00:26:54] 2025-10-09 04:26:09,140 | INFO     | cpuconsumptiontime: 48863 s
[2025-10-09 00:26:54] 2025-10-09 04:26:09,140 | INFO     | nevents: 400
[2025-10-09 00:26:54] 2025-10-09 04:26:09,140 | INFO     | neventsw: 0
[2025-10-09 00:26:54] 2025-10-09 04:26:09,140 | INFO     | pid: 25664
[2025-10-09 00:26:54] 2025-10-09 04:26:09,140 | INFO     | pgrp: 25664
[2025-10-09 00:26:54] 2025-10-09 04:26:09,140 | INFO     | corecount: 8
[2025-10-09 00:26:54] 2025-10-09 04:26:09,140 | INFO     | event service: False
[2025-10-09 00:26:54] 2025-10-09 04:26:09,141 | INFO     | sizes: {0: 2348816, 6: 2349078, 11: 2349106, 6602: 2376160, 6603: 2385213, 6606: 2385213, 6613: 2385535}
[2025-10-09 00:26:54] 2025-10-09 04:26:09,141 | INFO     | --------------------------------------------------
[2025-10-09 00:26:54] 2025-10-09 04:26:09,141 | INFO     | 
[2025-10-09 00:26:54] 2025-10-09 04:26:09,141 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-09 00:26:54] 2025-10-09 04:26:09,165 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,166 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,166 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,166 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,167 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,167 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,167 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,169 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,169 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 00:26:54] 2025-10-09 04:26:09,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,169 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 00:26:54] 2025-10-09 04:26:09,169 | INFO     | job 6830895362 has completed (purged errors)
[2025-10-09 00:26:54] 2025-10-09 04:26:09,170 | INFO     | overall cleanup function is called
[2025-10-09 00:26:54] 2025-10-09 04:26:09,282 | INFO     | PID=18325 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 00:26:54] 2025-10-09 04:26:10,179 | INFO     | --- collectZombieJob: --- 10, [25664]
[2025-10-09 00:26:54] 2025-10-09 04:26:10,179 | INFO     | zombie collector waiting for pid 25664
[2025-10-09 00:26:54] 2025-10-09 04:26:10,180 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 00:26:54] 2025-10-09 04:26:10,180 | INFO     | collected zombie processes
[2025-10-09 00:26:54] 2025-10-09 04:26:10,180 | INFO     | will attempt to kill all subprocesses of pid=25664
[2025-10-09 00:26:54] 2025-10-09 04:26:10,269 | INFO     | process IDs to be killed: [25664] (in reverse order)
[2025-10-09 00:26:54] 2025-10-09 04:26:10,327 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 00:26:54] 2025-10-09 04:26:10,328 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 00:26:54] 2025-10-09 04:26:10,332 | INFO     | did not find any defunct processes belonging to 25664
[2025-10-09 00:26:54] 2025-10-09 04:26:10,335 | INFO     | did not find any defunct processes belonging to 25664
[2025-10-09 00:26:54] 2025-10-09 04:26:10,336 | INFO     | ready for new job
[2025-10-09 00:26:54] 2025-10-09 04:26:10,336 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 00:26:54] 2025-10-09 04:26:10,338 | INFO     | ***************************************
[2025-10-09 00:26:54] 2025-10-09 04:26:10,338 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 00:26:54] 2025-10-09 04:26:10,338 | INFO     | ***************************************
[2025-10-09 00:26:54] 2025-10-09 04:26:10,339 | INFO     | 
[2025-10-09 00:26:54] 2025-10-09 04:26:10,339 | INFO     | architecture information:
[2025-10-09 00:26:54] 2025-10-09 04:26:10,340 | INFO     | executing command: cat /etc/os-release
[2025-10-09 00:26:54] 2025-10-09 04:26:10,359 | INFO     | cat /etc/os-release:
[2025-10-09 00:26:54] NAME="CentOS Linux"
[2025-10-09 00:26:54] VERSION="7 (Core)"
[2025-10-09 00:26:54] ID="centos"
[2025-10-09 00:26:54] ID_LIKE="rhel fedora"
[2025-10-09 00:26:54] VERSION_ID="7"
[2025-10-09 00:26:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 00:26:54] ANSI_COLOR="0;31"
[2025-10-09 00:26:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 00:26:54] HOME_URL="https://www.centos.org/"
[2025-10-09 00:26:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 00:26:54] 
[2025-10-09 00:26:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 00:26:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 00:26:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 00:26:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 00:26:54] 
[2025-10-09 00:26:54] 2025-10-09 04:26:10,359 | INFO     | ***************************************
[2025-10-09 00:26:54] 2025-10-09 04:26:10,861 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-09 00:26:54] 2025-10-09 04:26:10,882 | INFO     | sufficient remaining disk space (18587058176 B)
[2025-10-09 00:26:54] 2025-10-09 04:26:10,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 00:26:54] 2025-10-09 04:26:10,883 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 00:26:54] 2025-10-09 04:26:10,883 | INFO     | update_server=False
[2025-10-09 00:26:54] 2025-10-09 04:26:10,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 00:26:54] 2025-10-09 04:26:10,884 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 00:26:54] 2025-10-09 04:26:10,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 00:26:54] 2025-10-09 04:26:11,212 | INFO     | all data control threads have been joined
[2025-10-09 00:26:54] 2025-10-09 04:26:11,315 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 00:26:54] 2025-10-09 04:26:11,316 | INFO     | aborting loop
[2025-10-09 00:26:54] 2025-10-09 04:26:11,543 | INFO     | all job control threads have been joined
[2025-10-09 00:26:54] 2025-10-09 04:26:11,889 | INFO     | [job] retrieve thread has finished
[2025-10-09 00:26:54] 2025-10-09 04:26:11,890 | INFO     | [job] queue monitor thread has finished
[2025-10-09 00:26:54] 2025-10-09 04:26:11,960 | INFO     | all payload control threads have been joined
[2025-10-09 00:26:54] 2025-10-09 04:26:12,217 | INFO     | [data] control thread has finished
[2025-10-09 00:26:54] 2025-10-09 04:26:12,250 | INFO     | [payload] validate_post thread has finished
[2025-10-09 00:26:54] 2025-10-09 04:26:12,274 | INFO     | [data] copytool_in thread has finished
[2025-10-09 00:26:54] 2025-10-09 04:26:12,274 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 00:26:54] 2025-10-09 04:26:12,312 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 00:26:54] 2025-10-09 04:26:12,321 | INFO     | [job] job monitor thread has finished
[2025-10-09 00:26:54] 2025-10-09 04:26:12,549 | INFO     | [job] control thread has finished
[2025-10-09 00:26:54] 2025-10-09 04:26:12,597 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 00:26:54] 2025-10-09 04:26:12,887 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 00:26:54] 2025-10-09 04:26:12,889 | INFO     | [data] copytool_out thread has finished
[2025-10-09 00:26:54] 2025-10-09 04:26:12,965 | INFO     | [payload] control thread has finished
[2025-10-09 00:26:54] 2025-10-09 04:26:12,974 | INFO     | [payload] failed_post thread has finished
[2025-10-09 00:26:54] 2025-10-09 04:26:13,065 | INFO     | [job] validate thread has finished
[2025-10-09 00:26:54] 2025-10-09 04:26:13,166 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 00:26:54] 2025-10-09 04:26:16,603 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 00:26:54] 2025-10-09 04:26:41,497 | INFO     | PID=18325 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 00:26:54] 2025-10-09 04:26:41,500 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 00:26:54] 2025-10-09 04:26:41,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 00:26:54] 2025-10-09 04:26:41,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 00:26:54] 2025-10-09 04:26:48,762 | INFO     | [monitor] cgroup control has ended
[2025-10-09 00:26:54] 2025-10-09 04:26:49,519 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140411344844608)>', '<ExcThread(monitor, started 140410374571776)>']
[2025-10-09 00:26:54] 2025-10-09 04:26:49,537 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 00:26:54] 2025-10-09 04:26:49,538 | INFO     | [monitor] control thread has ended
[2025-10-09 00:26:54] 2025-10-09 04:26:54,526 | INFO     | all workflow threads have been joined
[2025-10-09 00:26:54] 2025-10-09 04:26:54,526 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 00:26:54] 2025-10-09 04:26:54,527 | INFO     | traces error code: 0
[2025-10-09 00:26:54] 2025-10-09 04:26:54,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 00:26:54] 2025-10-09 04:26:54,641 [wrapper] ==== pilot stdout END ====
[2025-10-09 00:26:54] 2025-10-09 04:26:54,647 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 00:26:54] 2025-10-09 04:26:54,653 [wrapper] pilotpid: 18325
[2025-10-09 00:26:54] 2025-10-09 04:26:54,658 [wrapper] Pilot exit status: 0
[2025-10-09 00:26:54] 2025-10-09 04:26:54,678 [wrapper] pandaids: 6830895362
[2025-10-09 00:26:54] 2025-10-09 04:26:54,728 [wrapper] cleanup supervisor_pilot 13711 18326
[2025-10-09 00:26:54] 2025-10-09 04:26:54,733 [wrapper] Test setup, not cleaning
[2025-10-09 00:26:54] 2025-10-09 04:26:54,738 [wrapper] apfmon messages muted
[2025-10-09 00:26:54] 2025-10-09 04:26:54,742 [wrapper] ==== wrapper stdout END ====
[2025-10-09 00:26:54] 2025-10-09 04:26:54,747 [wrapper] ==== wrapper stderr END ====
[2025-10-09 00:26:54]  *** Error codes and diagnostics ***
[2025-10-09 00:26:54]     "exeErrorCode": 0,
[2025-10-09 00:26:54]     "exeErrorDiag": "",
[2025-10-09 00:26:54]     "pilotErrorCode": 0,
[2025-10-09 00:26:54]     "pilotErrorDiag": "",
[2025-10-09 00:26:54]  *** Listing of results directory ***
[2025-10-09 00:26:54] total 388020
[2025-10-09 00:26:54] -rw-r--r-- 1 boincer umatlas    552446 Oct  5 00:22 pilot3.tar.gz
[2025-10-09 00:26:54] -rw-r--r-- 1 boincer umatlas      5112 Oct  5 00:28 queuedata.json
[2025-10-09 00:26:54] -rwx------ 1 boincer umatlas     36292 Oct  5 00:29 runpilot2-wrapper.sh
[2025-10-09 00:26:54] -rw-r--r-- 1 boincer umatlas       100 Oct  8 22:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 00:26:54] -rwxr-xr-x 1 boincer umatlas      7986 Oct  8 22:35 run_atlas
[2025-10-09 00:26:54] -rw-r--r-- 1 boincer umatlas       105 Oct  8 22:35 job.xml
[2025-10-09 00:26:54] -rw-r--r-- 2 boincer umatlas 213262942 Oct  8 22:35 EVNT.46376901._002781.pool.root.1
[2025-10-09 00:26:54] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 22:35 start_atlas.sh
[2025-10-09 00:26:54] drwxrwx--x 2 boincer umatlas      4096 Oct  8 22:35 shared
[2025-10-09 00:26:54] -rw-r--r-- 2 boincer umatlas    565603 Oct  8 22:35 input.tar.gz
[2025-10-09 00:26:54] -rw-r--r-- 1 boincer umatlas         0 Oct  8 22:35 boinc_lockfile
[2025-10-09 00:26:54] -rw-r--r-- 1 boincer umatlas      2519 Oct  8 22:35 pandaJob.out
[2025-10-09 00:26:54] -rw------- 1 boincer umatlas    979306 Oct  8 22:35 agis_schedconf.cvmfs.json
[2025-10-09 00:26:54] -rw------- 1 boincer umatlas   1560401 Oct  8 22:35 agis_ddmendpoints.agis.ALL.json
[2025-10-09 00:26:54] drwx------ 4 boincer umatlas      4096 Oct  8 22:35 pilot3
[2025-10-09 00:26:54] -rw-r--r-- 1 boincer umatlas      5909 Oct  9 00:19 init_data.xml
[2025-10-09 00:26:54] -rw------- 1 boincer umatlas 177576374 Oct  9 00:25 HITS.46376905._076195.pool.root.1
[2025-10-09 00:26:54] -rw-r--r-- 1 boincer umatlas       530 Oct  9 00:25 boinc_task_state.xml
[2025-10-09 00:26:54] -rw------- 1 boincer umatlas      1061 Oct  9 00:25 memory_monitor_summary.json
[2025-10-09 00:26:54] -rw------- 1 boincer umatlas    364625 Oct  9 00:25 log.46376905._076195.job.log.tgz.1
[2025-10-09 00:26:54] -rw------- 1 boincer umatlas      7852 Oct  9 00:26 heartbeat.json
[2025-10-09 00:26:54] -rw------- 1 boincer umatlas        95 Oct  9 00:26 pilot_heartbeat.json
[2025-10-09 00:26:54] -rw-r--r-- 1 boincer umatlas      8192 Oct  9 00:26 boinc_mmap_file
[2025-10-09 00:26:54] -rw-r--r-- 1 boincer umatlas        27 Oct  9 00:26 wrapper_checkpoint.txt
[2025-10-09 00:26:54] -rw------- 1 boincer umatlas      4746 Oct  9 00:26 pilotlog.txt
[2025-10-09 00:26:54] -rw------- 1 boincer umatlas    932765 Oct  9 00:26 log.46376905._076195.job.log.1
[2025-10-09 00:26:54] -rw------- 1 boincer umatlas       357 Oct  9 00:26 output.list
[2025-10-09 00:26:54] -rw-r--r-- 1 boincer umatlas       620 Oct  9 00:26 runtime_log
[2025-10-09 00:26:54] -rw------- 1 boincer umatlas   1320960 Oct  9 00:26 result.tar.gz
[2025-10-09 00:26:54] -rw-r--r-- 1 boincer umatlas      8703 Oct  9 00:26 runtime_log.err
[2025-10-09 00:26:54] -rw------- 1 boincer umatlas       658 Oct  9 00:26 Q0FNDmGYVP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmt5NNDm6F1DVm.diag
[2025-10-09 00:26:54] -rw-r--r-- 1 boincer umatlas     21209 Oct  9 00:26 stderr.txt
[2025-10-09 00:26:54] HITS file was successfully produced:
[2025-10-09 00:26:54] -rw------- 1 boincer umatlas 177576374 Oct  9 00:25 shared/HITS.pool.root.1
[2025-10-09 00:26:54]  *** Contents of shared directory: ***
[2025-10-09 00:26:54] total 383552
[2025-10-09 00:26:54] -rw-r--r-- 2 boincer umatlas 213262942 Oct  8 22:35 ATLAS.root_0
[2025-10-09 00:26:54] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 22:35 start_atlas.sh
[2025-10-09 00:26:54] -rw-r--r-- 2 boincer umatlas    565603 Oct  8 22:35 input.tar.gz
[2025-10-09 00:26:54] -rw------- 1 boincer umatlas 177576374 Oct  9 00:25 HITS.pool.root.1
[2025-10-09 00:26:54] -rw------- 1 boincer umatlas   1320960 Oct  9 00:26 result.tar.gz
00:26:55 (14641): run_atlas exited; CPU time 48817.143653
00:26:55 (14641): called boinc_finish(0)

</stderr_txt>
]]>

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