Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:28:07 (31597): wrapper (7.7.26015): starting
22:28:07 (31597): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 22:28:07] Arguments: --nthreads 8
[2025-10-08 22:28:07] Threads: 8
[2025-10-08 22:28:07] Checking for CVMFS
[2025-10-08 22:28:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 22:28:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 22:28:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 22:28:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 22:28:07] 2.11.2.0 8318 48029 95400 151493 0 1 18018819 18432001 1 130560 0 40312632 99.969 2226166 39342 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 22:28:07] CVMFS is ok
[2025-10-08 22:28:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 22:28:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 22:28:07] Further information can be found at the LHC@home message board.
[2025-10-08 22:28:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 22:28:07] Checking for apptainer binary...
[2025-10-08 22:28:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 22:28:07] Running /usr/bin/apptainer --version
[2025-10-08 22:28:07] apptainer version 1.3.2-1.el7
[2025-10-08 22:28:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 22:28:09] c-206-28.aglt2.org
[2025-10-08 22:28:09] apptainer works
[2025-10-08 22:28:09] Set ATHENA_PROC_NUMBER=8
[2025-10-08 22:28:09] Set ATHENA_CORE_NUMBER=8
[2025-10-08 22:28:09] Starting ATLAS job with PandaID=6830858111
[2025-10-08 22:28:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 01:09:46]  *** The last 200 lines of the pilot log: ***
[2025-10-09 01:09:46] 2025-10-09 05:08:51,865 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 01:09:46] 2025-10-09 05:08:51,865 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 01:09:46] 2025-10-09 05:08:51,865 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 01:09:46] 2025-10-09 05:08:51,867 | INFO     | fitting pss+swap vs Time
[2025-10-09 01:09:46] 2025-10-09 05:08:51,868 | INFO     | sum of square deviations: 1223016419.5
[2025-10-09 01:09:46] 2025-10-09 05:08:51,868 | INFO     | sum of deviations: -4265485725.500002
[2025-10-09 01:09:46] 2025-10-09 05:08:51,868 | INFO     | mean x: 1759981721.5
[2025-10-09 01:09:46] 2025-10-09 05:08:51,869 | INFO     | mean y: 2471891.335443038
[2025-10-09 01:09:46] 2025-10-09 05:08:51,869 | INFO     | -- intersect: 6140718925.8832655
[2025-10-09 01:09:46] 2025-10-09 05:08:51,869 | INFO     | intersect: 6140718925.8832655
[2025-10-09 01:09:46] 2025-10-09 05:08:51,869 | INFO     | chi2: 2.1028129815168084
[2025-10-09 01:09:46] 2025-10-09 05:08:51,869 | INFO     | sum of square deviations: 1110539892.0
[2025-10-09 01:09:46] 2025-10-09 05:08:51,870 | INFO     | sum of deviations: 6223805172.999997
[2025-10-09 01:09:46] 2025-10-09 05:08:51,870 | INFO     | mean x: 1759981569.0
[2025-10-09 01:09:46] 2025-10-09 05:08:51,870 | INFO     | mean y: 2485753.0261437907
[2025-10-09 01:09:46] 2025-10-09 05:08:51,870 | INFO     | -- intersect: -9860989185.996445
[2025-10-09 01:09:46] 2025-10-09 05:08:51,870 | INFO     | intersect: -9860989185.996445
[2025-10-09 01:09:46] 2025-10-09 05:08:51,871 | INFO     | chi2: 1.3302581846685209
[2025-10-09 01:09:46] 2025-10-09 05:08:51,871 | INFO     | current chi2=1.3302581846685209 (change=36.7391110687849 %)
[2025-10-09 01:09:46] 2025-10-09 05:08:51,871 | INFO     | sum of square deviations: 1005179777.0
[2025-10-09 01:09:46] 2025-10-09 05:08:51,872 | INFO     | sum of deviations: 6156102798.0
[2025-10-09 01:09:46] 2025-10-09 05:08:51,872 | INFO     | mean x: 1759981416.5
[2025-10-09 01:09:46] 2025-10-09 05:08:51,872 | INFO     | mean y: 2485655.0
[2025-10-09 01:09:46] 2025-10-09 05:08:51,872 | INFO     | -- intersect: -10776309114.309862
[2025-10-09 01:09:46] 2025-10-09 05:08:51,872 | INFO     | intersect: -10776309114.309862
[2025-10-09 01:09:46] 2025-10-09 05:08:51,872 | INFO     | chi2: 1.331407527622729
[2025-10-09 01:09:46] 2025-10-09 05:08:51,872 | INFO     | current chi2=1.331407527622729 (change=-0.08639999117875061 %)
[2025-10-09 01:09:46] 2025-10-09 05:08:51,873 | INFO     | right removable region: 147
[2025-10-09 01:09:46] 2025-10-09 05:08:51,873 | INFO     | sum of square deviations: 1110539892.0
[2025-10-09 01:09:46] 2025-10-09 05:08:51,873 | INFO     | sum of deviations: -24491436011.0
[2025-10-09 01:09:46] 2025-10-09 05:08:51,874 | INFO     | mean x: 1759981874.0
[2025-10-09 01:09:46] 2025-10-09 05:08:51,874 | INFO     | mean y: 2498844.4901960786
[2025-10-09 01:09:46] 2025-10-09 05:08:51,874 | INFO     | -- intersect: 38816488110.524475
[2025-10-09 01:09:46] 2025-10-09 05:08:51,874 | INFO     | intersect: 38816488110.524475
[2025-10-09 01:09:46] 2025-10-09 05:08:51,874 | INFO     | chi2: 0.8300150399256808
[2025-10-09 01:09:46] 2025-10-09 05:08:51,874 | INFO     | current chi2=0.8300150399256808 (change=60.52834716062237 %)
[2025-10-09 01:09:46] 2025-10-09 05:08:51,874 | INFO     | sum of square deviations: 1005179777.0
[2025-10-09 01:09:46] 2025-10-09 05:08:51,875 | INFO     | sum of deviations: -19920923293.000004
[2025-10-09 01:09:46] 2025-10-09 05:08:51,875 | INFO     | mean x: 1759982026.5
[2025-10-09 01:09:46] 2025-10-09 05:08:51,875 | INFO     | mean y: 2492238.378378378
[2025-10-09 01:09:46] 2025-10-09 05:08:51,875 | INFO     | -- intersect: 34882289613.137146
[2025-10-09 01:09:46] 2025-10-09 05:08:51,876 | INFO     | intersect: 34882289613.137146
[2025-10-09 01:09:46] 2025-10-09 05:08:51,876 | INFO     | chi2: 0.8162978614994851
[2025-10-09 01:09:46] 2025-10-09 05:08:51,876 | INFO     | current chi2=0.8162978614994851 (change=1.6526421530173616 %)
[2025-10-09 01:09:46] 2025-10-09 05:08:51,876 | INFO     | left removable region: 20
[2025-10-09 01:09:46] 2025-10-09 05:08:51,876 | INFO     | sum of square deviations: 635130048.0
[2025-10-09 01:09:46] 2025-10-09 05:08:51,877 | INFO     | sum of deviations: -6774878928.999998
[2025-10-09 01:09:46] 2025-10-09 05:08:51,877 | INFO     | mean x: 1759981996.0
[2025-10-09 01:09:46] 2025-10-09 05:08:51,877 | INFO     | mean y: 2504199.6692913384
[2025-10-09 01:09:46] 2025-10-09 05:08:51,877 | INFO     | -- intersect: 18776084472.980118
[2025-10-09 01:09:46] 2025-10-09 05:08:51,877 | INFO     | intersect: 18776084472.980118
[2025-10-09 01:09:46] 2025-10-09 05:08:51,877 | INFO     | chi2: 0.015723034102798746
[2025-10-09 01:09:46] 2025-10-09 05:08:51,877 | INFO     | -- intersect: 18776084472.980118
[2025-10-09 01:09:46] 2025-10-09 05:08:51,878 | INFO     | current memory leak: -10.67 B/s (using 127 data points, chi2=0.02)
[2025-10-09 01:09:46] 2025-10-09 05:08:51,878 | INFO     | could have reported an average CPU frequency of 2308 MHz (9 samples)
[2025-10-09 01:09:46] 2025-10-09 05:08:51,878 | INFO     | ..............................
[2025-10-09 01:09:46] 2025-10-09 05:08:51,878 | INFO     | . Timing measurements:
[2025-10-09 01:09:46] 2025-10-09 05:08:51,878 | INFO     | . get job = 0 s
[2025-10-09 01:09:46] 2025-10-09 05:08:51,878 | INFO     | . initial setup = 2 s
[2025-10-09 01:09:46] 2025-10-09 05:08:51,878 | INFO     | . payload setup = 7 s
[2025-10-09 01:09:46] 2025-10-09 05:08:51,879 | INFO     | . stage-in = 0 s
[2025-10-09 01:09:46] 2025-10-09 05:08:51,879 | INFO     | . payload execution = 9592 s
[2025-10-09 01:09:46] 2025-10-09 05:08:51,879 | INFO     | . stage-out = 0 s
[2025-10-09 01:09:46] 2025-10-09 05:08:51,879 | INFO     | . log creation = 0 s
[2025-10-09 01:09:46] 2025-10-09 05:08:51,879 | INFO     | ..............................
[2025-10-09 01:09:46] 2025-10-09 05:08:51,973 | INFO     | 
[2025-10-09 01:09:46] 2025-10-09 05:08:51,974 | INFO     | job summary report
[2025-10-09 01:09:46] 2025-10-09 05:08:51,974 | INFO     | --------------------------------------------------
[2025-10-09 01:09:46] 2025-10-09 05:08:51,974 | INFO     | PanDA job id: 6830858111
[2025-10-09 01:09:46] 2025-10-09 05:08:51,974 | INFO     | task id: 46376905
[2025-10-09 01:09:46] 2025-10-09 05:08:51,974 | INFO     | errors: (none)
[2025-10-09 01:09:46] 2025-10-09 05:08:51,974 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 01:09:46] 2025-10-09 05:08:51,974 | INFO     | pilot state: finished 
[2025-10-09 01:09:46] 2025-10-09 05:08:51,974 | INFO     | transexitcode: 0
[2025-10-09 01:09:46] 2025-10-09 05:08:51,974 | INFO     | exeerrorcode: 0
[2025-10-09 01:09:46] 2025-10-09 05:08:51,974 | INFO     | exeerrordiag: 
[2025-10-09 01:09:46] 2025-10-09 05:08:51,975 | INFO     | exitcode: 0
[2025-10-09 01:09:46] 2025-10-09 05:08:51,975 | INFO     | exitmsg: OK
[2025-10-09 01:09:46] 2025-10-09 05:08:51,975 | INFO     | cpuconsumptiontime: 72162 s
[2025-10-09 01:09:46] 2025-10-09 05:08:51,975 | INFO     | nevents: 400
[2025-10-09 01:09:46] 2025-10-09 05:08:51,975 | INFO     | neventsw: 0
[2025-10-09 01:09:46] 2025-10-09 05:08:51,975 | INFO     | pid: 11407
[2025-10-09 01:09:46] 2025-10-09 05:08:51,975 | INFO     | pgrp: 11407
[2025-10-09 01:09:46] 2025-10-09 05:08:51,975 | INFO     | corecount: 8
[2025-10-09 01:09:46] 2025-10-09 05:08:51,975 | INFO     | event service: False
[2025-10-09 01:09:46] 2025-10-09 05:08:51,975 | INFO     | sizes: {0: 2348816, 5: 2349078, 11: 2349134, 9603: 2377475, 9605: 2386529, 9611: 2386731}
[2025-10-09 01:09:46] 2025-10-09 05:08:51,976 | INFO     | --------------------------------------------------
[2025-10-09 01:09:46] 2025-10-09 05:08:51,976 | INFO     | 
[2025-10-09 01:09:46] 2025-10-09 05:08:51,976 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-09 01:09:46] 2025-10-09 05:08:51,993 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,993 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,993 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,993 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,993 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,993 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,993 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,994 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,994 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,994 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,994 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,994 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,994 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,994 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,994 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,994 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,995 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,995 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 01:09:46] 2025-10-09 05:08:51,995 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,995 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 01:09:46] 2025-10-09 05:08:51,995 | INFO     | job 6830858111 has completed (purged errors)
[2025-10-09 01:09:46] 2025-10-09 05:08:51,995 | INFO     | overall cleanup function is called
[2025-10-09 01:09:46] 2025-10-09 05:08:53,003 | INFO     | --- collectZombieJob: --- 10, [11407]
[2025-10-09 01:09:46] 2025-10-09 05:08:53,004 | INFO     | zombie collector waiting for pid 11407
[2025-10-09 01:09:46] 2025-10-09 05:08:53,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 01:09:46] 2025-10-09 05:08:53,004 | INFO     | collected zombie processes
[2025-10-09 01:09:46] 2025-10-09 05:08:53,004 | INFO     | will attempt to kill all subprocesses of pid=11407
[2025-10-09 01:09:46] 2025-10-09 05:08:53,142 | INFO     | process IDs to be killed: [11407] (in reverse order)
[2025-10-09 01:09:46] 2025-10-09 05:08:53,198 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 01:09:46] 2025-10-09 05:08:53,199 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 01:09:46] 2025-10-09 05:08:53,202 | INFO     | did not find any defunct processes belonging to 11407
[2025-10-09 01:09:46] 2025-10-09 05:08:53,204 | INFO     | did not find any defunct processes belonging to 11407
[2025-10-09 01:09:46] 2025-10-09 05:08:53,204 | INFO     | ready for new job
[2025-10-09 01:09:46] 2025-10-09 05:08:53,204 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 01:09:46] 2025-10-09 05:08:53,205 | INFO     | ***************************************
[2025-10-09 01:09:46] 2025-10-09 05:08:53,205 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 01:09:46] 2025-10-09 05:08:53,206 | INFO     | ***************************************
[2025-10-09 01:09:46] 2025-10-09 05:08:53,206 | INFO     | 
[2025-10-09 01:09:46] 2025-10-09 05:08:53,207 | INFO     | architecture information:
[2025-10-09 01:09:46] 2025-10-09 05:08:53,207 | INFO     | executing command: cat /etc/os-release
[2025-10-09 01:09:46] 2025-10-09 05:08:53,217 | INFO     | cat /etc/os-release:
[2025-10-09 01:09:46] NAME="CentOS Linux"
[2025-10-09 01:09:46] VERSION="7 (Core)"
[2025-10-09 01:09:46] ID="centos"
[2025-10-09 01:09:46] ID_LIKE="rhel fedora"
[2025-10-09 01:09:46] VERSION_ID="7"
[2025-10-09 01:09:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 01:09:46] ANSI_COLOR="0;31"
[2025-10-09 01:09:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 01:09:46] HOME_URL="https://www.centos.org/"
[2025-10-09 01:09:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 01:09:46] 
[2025-10-09 01:09:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 01:09:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 01:09:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 01:09:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 01:09:46] 
[2025-10-09 01:09:46] 2025-10-09 05:08:53,218 | INFO     | ***************************************
[2025-10-09 01:09:46] 2025-10-09 05:08:53,721 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-09 01:09:46] 2025-10-09 05:08:53,739 | INFO     | sufficient remaining disk space (27996979200 B)
[2025-10-09 01:09:46] 2025-10-09 05:08:53,740 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 01:09:46] 2025-10-09 05:08:53,740 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 01:09:46] 2025-10-09 05:08:53,740 | INFO     | update_server=False
[2025-10-09 01:09:46] 2025-10-09 05:08:53,740 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 01:09:46] 2025-10-09 05:08:53,741 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 01:09:46] 2025-10-09 05:08:53,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 01:09:46] 2025-10-09 05:08:53,741 | INFO     | aborting loop
[2025-10-09 01:09:46] 2025-10-09 05:08:53,756 | INFO     | all payload control threads have been joined
[2025-10-09 01:09:46] 2025-10-09 05:08:54,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 01:09:46] 2025-10-09 05:08:54,462 | INFO     | all job control threads have been joined
[2025-10-09 01:09:46] 2025-10-09 05:08:54,598 | INFO     | all data control threads have been joined
[2025-10-09 01:09:46] 2025-10-09 05:08:54,746 | INFO     | [job] retrieve thread has finished
[2025-10-09 01:09:46] 2025-10-09 05:08:54,746 | INFO     | [job] queue monitor thread has finished
[2025-10-09 01:09:46] 2025-10-09 05:08:54,747 | INFO     | [job] job monitor thread has finished
[2025-10-09 01:09:46] 2025-10-09 05:08:54,762 | INFO     | [payload] control thread has finished
[2025-10-09 01:09:46] 2025-10-09 05:08:54,902 | INFO     | [payload] failed_post thread has finished
[2025-10-09 01:09:46] 2025-10-09 05:08:55,206 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 01:09:46] 2025-10-09 05:08:55,277 | INFO     | [data] copytool_in thread has finished
[2025-10-09 01:09:46] 2025-10-09 05:08:55,469 | INFO     | [job] control thread has finished
[2025-10-09 01:09:46] 2025-10-09 05:08:55,562 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 01:09:46] 2025-10-09 05:08:55,604 | INFO     | [data] control thread has finished
[2025-10-09 01:09:46] 2025-10-09 05:08:55,723 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 01:09:46] 2025-10-09 05:08:56,033 | INFO     | [job] validate thread has finished
[2025-10-09 01:09:46] 2025-10-09 05:08:56,040 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 01:09:46] 2025-10-09 05:08:56,070 | INFO     | [payload] validate_post thread has finished
[2025-10-09 01:09:46] 2025-10-09 05:08:56,291 | INFO     | [data] copytool_out thread has finished
[2025-10-09 01:09:46] 2025-10-09 05:08:56,856 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 01:09:46] 2025-10-09 05:09:00,864 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 01:09:46] 2025-10-09 05:09:25,028 | INFO     | PID=2911 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-09 01:09:46] 2025-10-09 05:09:25,034 | INFO     | .. there are 3 such processes running
[2025-10-09 01:09:46] 2025-10-09 05:09:25,034 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 01:09:46] 2025-10-09 05:09:25,034 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 01:09:46] 2025-10-09 05:09:25,034 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 01:09:46] 2025-10-09 05:09:40,122 | INFO     | [monitor] cgroup control has ended
[2025-10-09 01:09:46] 2025-10-09 05:09:40,921 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140247253190464)>', '<ExcThread(monitor, started 140246436009728)>']
[2025-10-09 01:09:46] 2025-10-09 05:09:41,114 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 01:09:46] 2025-10-09 05:09:41,114 | INFO     | [monitor] control thread has ended
[2025-10-09 01:09:46] 2025-10-09 05:09:45,935 | INFO     | all workflow threads have been joined
[2025-10-09 01:09:46] 2025-10-09 05:09:45,940 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 01:09:46] 2025-10-09 05:09:45,941 | INFO     | traces error code: 0
[2025-10-09 01:09:46] 2025-10-09 05:09:45,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 01:09:46] 2025-10-09 05:09:46,058 [wrapper] ==== pilot stdout END ====
[2025-10-09 01:09:46] 2025-10-09 05:09:46,061 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 01:09:46] 2025-10-09 05:09:46,064 [wrapper] pilotpid: 2911
[2025-10-09 01:09:46] 2025-10-09 05:09:46,066 [wrapper] Pilot exit status: 0
[2025-10-09 01:09:46] 2025-10-09 05:09:46,076 [wrapper] pandaids: 6830858111
[2025-10-09 01:09:46] 2025-10-09 05:09:46,120 [wrapper] cleanup supervisor_pilot   750 2912
[2025-10-09 01:09:46] 2025-10-09 05:09:46,123 [wrapper] Test setup, not cleaning
[2025-10-09 01:09:46] 2025-10-09 05:09:46,126 [wrapper] apfmon messages muted
[2025-10-09 01:09:46] 2025-10-09 05:09:46,129 [wrapper] ==== wrapper stdout END ====
[2025-10-09 01:09:46] 2025-10-09 05:09:46,131 [wrapper] ==== wrapper stderr END ====
[2025-10-09 01:09:46]  *** Error codes and diagnostics ***
[2025-10-09 01:09:46]     "exeErrorCode": 0,
[2025-10-09 01:09:46]     "exeErrorDiag": "",
[2025-10-09 01:09:46]     "pilotErrorCode": 0,
[2025-10-09 01:09:46]     "pilotErrorDiag": "",
[2025-10-09 01:09:46]  *** Listing of results directory ***
[2025-10-09 01:09:46] total 393704
[2025-10-09 01:09:46] -rw-r--r-- 1 boincer umatlas    552446 Oct  4 23:58 pilot3.tar.gz
[2025-10-09 01:09:46] -rw-r--r-- 1 boincer umatlas      5112 Oct  5 00:06 queuedata.json
[2025-10-09 01:09:46] -rwx------ 1 boincer umatlas     36292 Oct  5 00:07 runpilot2-wrapper.sh
[2025-10-09 01:09:46] -rw-r--r-- 1 boincer umatlas       100 Oct  8 22:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 01:09:46] -rwxr-xr-x 1 boincer umatlas      7986 Oct  8 22:28 run_atlas
[2025-10-09 01:09:46] -rw-r--r-- 1 boincer umatlas       105 Oct  8 22:28 job.xml
[2025-10-09 01:09:46] -rw-r--r-- 2 boincer umatlas 214073483 Oct  8 22:28 EVNT.46376901._002756.pool.root.1
[2025-10-09 01:09:46] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 22:28 start_atlas.sh
[2025-10-09 01:09:46] drwxrwx--x 2 boincer umatlas      4096 Oct  8 22:28 shared
[2025-10-09 01:09:46] -rw-r--r-- 2 boincer umatlas    565604 Oct  8 22:28 input.tar.gz
[2025-10-09 01:09:46] -rw-r--r-- 1 boincer umatlas         0 Oct  8 22:28 boinc_lockfile
[2025-10-09 01:09:46] -rw-r--r-- 1 boincer umatlas      2519 Oct  8 22:28 pandaJob.out
[2025-10-09 01:09:46] -rw------- 1 boincer umatlas    979306 Oct  8 22:28 agis_schedconf.cvmfs.json
[2025-10-09 01:09:46] -rw------- 1 boincer umatlas   1560401 Oct  8 22:28 agis_ddmendpoints.agis.ALL.json
[2025-10-09 01:09:46] drwx------ 4 boincer umatlas      4096 Oct  8 22:28 pilot3
[2025-10-09 01:09:46] -rw-r--r-- 1 boincer umatlas      5952 Oct  9 01:01 init_data.xml
[2025-10-09 01:09:46] -rw------- 1 boincer umatlas 181707149 Oct  9 01:08 HITS.46376905._075510.pool.root.1
[2025-10-09 01:09:46] -rw-r--r-- 1 boincer umatlas       530 Oct  9 01:08 boinc_task_state.xml
[2025-10-09 01:09:46] -rw------- 1 boincer umatlas      1051 Oct  9 01:08 memory_monitor_summary.json
[2025-10-09 01:09:46] -rw------- 1 boincer umatlas        95 Oct  9 01:08 pilot_heartbeat.json
[2025-10-09 01:09:46] -rw------- 1 boincer umatlas    390384 Oct  9 01:08 log.46376905._075510.job.log.tgz.1
[2025-10-09 01:09:46] -rw------- 1 boincer umatlas      7852 Oct  9 01:08 heartbeat.json
[2025-10-09 01:09:46] -rw-r--r-- 1 boincer umatlas      8192 Oct  9 01:09 boinc_mmap_file
[2025-10-09 01:09:46] -rw-r--r-- 1 boincer umatlas        27 Oct  9 01:09 wrapper_checkpoint.txt
[2025-10-09 01:09:46] -rw------- 1 boincer umatlas      4820 Oct  9 01:09 pilotlog.txt
[2025-10-09 01:09:46] -rw------- 1 boincer umatlas   1346620 Oct  9 01:09 log.46376905._075510.job.log.1
[2025-10-09 01:09:46] -rw------- 1 boincer umatlas       357 Oct  9 01:09 output.list
[2025-10-09 01:09:46] -rw-r--r-- 1 boincer umatlas       620 Oct  9 01:09 runtime_log
[2025-10-09 01:09:46] -rw------- 1 boincer umatlas   1761280 Oct  9 01:09 result.tar.gz
[2025-10-09 01:09:46] -rw-r--r-- 1 boincer umatlas      8703 Oct  9 01:09 runtime_log.err
[2025-10-09 01:09:46] -rw------- 1 boincer umatlas       659 Oct  9 01:09 0MtKDm2CVP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQvNNDmfl6VJn.diag
[2025-10-09 01:09:46] -rw-r--r-- 1 boincer umatlas     20832 Oct  9 01:09 stderr.txt
[2025-10-09 01:09:46] HITS file was successfully produced:
[2025-10-09 01:09:46] -rw------- 1 boincer umatlas 181707149 Oct  9 01:08 shared/HITS.pool.root.1
[2025-10-09 01:09:46]  *** Contents of shared directory: ***
[2025-10-09 01:09:46] total 388808
[2025-10-09 01:09:46] -rw-r--r-- 2 boincer umatlas 214073483 Oct  8 22:28 ATLAS.root_0
[2025-10-09 01:09:46] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 22:28 start_atlas.sh
[2025-10-09 01:09:46] -rw-r--r-- 2 boincer umatlas    565604 Oct  8 22:28 input.tar.gz
[2025-10-09 01:09:46] -rw------- 1 boincer umatlas 181707149 Oct  9 01:08 HITS.pool.root.1
[2025-10-09 01:09:46] -rw------- 1 boincer umatlas   1761280 Oct  9 01:09 result.tar.gz
01:09:47 (31597): run_atlas exited; CPU time 72240.812507
01:09:47 (31597): called boinc_finish(0)

</stderr_txt>
]]>

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