Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:39:01 (2960169): wrapper (7.7.26015): starting
05:39:01 (2960169): wrapper: running run_atlas (--nthreads 3)
[2025-10-09 05:39:01] Arguments: --nthreads 3
[2025-10-09 05:39:01] Threads: 3
[2025-10-09 05:39:01] Checking for CVMFS
[2025-10-09 05:39:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 05:39:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 05:39:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 05:39:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 05:39:01] 2.9.2.0 2898205 169 54412 151495 2 57 25338085 36864001 0 130560 0 131379 99.978 9463 1374 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-09 05:39:01] CVMFS is ok
[2025-10-09 05:39:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 05:39:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 05:39:02] Further information can be found at the LHC@home message board.
[2025-10-09 05:39:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 05:39:02] Checking for apptainer binary...
[2025-10-09 05:39:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 05:39:02] Running /usr/bin/apptainer --version
[2025-10-09 05:39:02] apptainer version 1.4.1-1.1
[2025-10-09 05:39:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 05:39:02] atlasA215c
[2025-10-09 05:39:02] apptainer works
[2025-10-09 05:39:02] Set ATHENA_PROC_NUMBER=3
[2025-10-09 05:39:02] Set ATHENA_CORE_NUMBER=3
[2025-10-09 05:39:02] Starting ATLAS job with PandaID=6835983541
[2025-10-09 05:39:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 07:05:31]  *** The last 200 lines of the pilot log: ***
[2025-10-09 07:05:31] ]
[2025-10-09 07:05:31] 2025-10-09 05:04:57,903 | INFO     | transferring file log.46676269._004981.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6835983541/log.46676269._004981.job.log.tgz.1 to /local/data/boinc/
[2025-10-09 07:05:31] 2025-10-09 05:04:57,903 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6835983541/log.46676269._004981.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0049
[2025-10-09 07:05:31] 2025-10-09 05:04:57,917 | INFO     | adding to output.list: log.46676269._004981.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/1e/log.46676269._004981.job.log.tg
[2025-10-09 07:05:31] 2025-10-09 05:04:57,918 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-09 07:05:31] 2025-10-09 05:04:57,918 | INFO     | summary of transferred files:
[2025-10-09 07:05:31] 2025-10-09 05:04:57,918 | INFO     |  -- lfn=log.46676269._004981.job.log.tgz.1, status_code=0, status=transferred
[2025-10-09 07:05:31] 2025-10-09 05:04:57,918 | INFO     | stage-out finished correctly
[2025-10-09 07:05:31] 2025-10-09 05:04:58,333 | INFO     | time since job start (5150s) is within the limit (172800.0s)
[2025-10-09 07:05:31] 2025-10-09 05:05:00,339 | INFO     | time since job start (5152s) is within the limit (172800.0s)
[2025-10-09 07:05:31] 2025-10-09 05:05:01,299 | WARNING  | process 2970344 can no longer be monitored (due to stat problems) - aborting
[2025-10-09 07:05:31] 2025-10-09 05:05:01,299 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6835983541/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 07:05:31] 2025-10-09 05:05:01,305 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 07:05:31] 2025-10-09 05:05:01,374 | INFO     | number of running child processes to parent process 2970344: 1
[2025-10-09 07:05:31] 2025-10-09 05:05:01,374 | INFO     | maximum number of monitored processes: 6
[2025-10-09 07:05:31] 2025-10-09 05:05:02,345 | INFO     | time since job start (5154s) is within the limit (172800.0s)
[2025-10-09 07:05:31] 2025-10-09 05:05:03,410 | INFO     | PID=2963892 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 07:05:31] 2025-10-09 05:05:03,877 | INFO     | monitor loop #395: job 0:6835983541 is in state 'finished'
[2025-10-09 07:05:31] 2025-10-09 05:05:03,878 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 07:05:31] 2025-10-09 05:05:04,207 | INFO     | job 6835983541 has state=finished
[2025-10-09 07:05:31] 2025-10-09 05:05:04,208 | INFO     | preparing for final server update for job 6835983541 in state='finished'
[2025-10-09 07:05:31] 2025-10-09 05:05:04,208 | INFO     | this job has now completed (state=finished)
[2025-10-09 07:05:31] 2025-10-09 05:05:04,208 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 07:05:31] 2025-10-09 05:05:04,208 | INFO     | log transfer has been attempted: DONE
[2025-10-09 07:05:31] 2025-10-09 05:05:04,208 | INFO     | job 6835983541 has finished - writing final server update
[2025-10-09 07:05:31] 2025-10-09 05:05:04,208 | INFO     | total number of processed events: 400 (read)
[2025-10-09 07:05:31] 2025-10-09 05:05:04,209 | INFO     | executing command: lscpu
[2025-10-09 07:05:31] 2025-10-09 05:05:04,224 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 07:05:31] 2025-10-09 05:05:04,410 | INFO     | time since job start (5156s) is within the limit (172800.0s)
[2025-10-09 07:05:31] 2025-10-09 05:05:06,381 | INFO     | monitor loop #396: job 0:6835983541 is in state 'finished'
[2025-10-09 07:05:31] 2025-10-09 05:05:06,381 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 07:05:31] 2025-10-09 05:05:06,416 | INFO     | time since job start (5158s) is within the limit (172800.0s)
[2025-10-09 07:05:31] 2025-10-09 05:05:08,420 | INFO     | time since job start (5160s) is within the limit (172800.0s)
[2025-10-09 07:05:31] 2025-10-09 05:05:08,885 | INFO     | monitor loop #397: job 0:6835983541 is in state 'finished'
[2025-10-09 07:05:31] 2025-10-09 05:05:08,885 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 07:05:31] 2025-10-09 05:05:10,189 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-09 07:05:31] 2025-10-09 05:05:10,190 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3856.29625
[2025-10-09 07:05:31] 2025-10-09 05:05:10,191 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6835983541/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 07:05:31] 2025-10-09 05:05:10,191 | INFO     | extracted standard info from prmon json
[2025-10-09 07:05:31] 2025-10-09 05:05:10,191 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 07:05:31] 2025-10-09 05:05:10,191 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 07:05:31] 2025-10-09 05:05:10,191 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 07:05:31] 2025-10-09 05:05:10,191 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 07:05:31] 2025-10-09 05:05:10,192 | INFO     | fitting pss+swap vs Time
[2025-10-09 07:05:31] 2025-10-09 05:05:10,192 | INFO     | sum of square deviations: 147126479.5
[2025-10-09 07:05:31] 2025-10-09 05:05:10,192 | INFO     | sum of deviations: -16395316236.0
[2025-10-09 07:05:31] 2025-10-09 05:05:10,192 | INFO     | mean x: 1759983821.5
[2025-10-09 07:05:31] 2025-10-09 05:05:10,192 | INFO     | mean y: 2479245.846153846
[2025-10-09 07:05:31] 2025-10-09 05:05:10,192 | INFO     | -- intersect: 196129589891.05313
[2025-10-09 07:05:31] 2025-10-09 05:05:10,192 | INFO     | intersect: 196129589891.05313
[2025-10-09 07:05:31] 2025-10-09 05:05:10,193 | INFO     | chi2: 0.13948117562008489
[2025-10-09 07:05:31] 2025-10-09 05:05:10,193 | INFO     | -- intersect: 196129589891.05313
[2025-10-09 07:05:31] 2025-10-09 05:05:10,193 | INFO     | current memory leak: -111.44 B/s (using 78 data points, chi2=0.14)
[2025-10-09 07:05:31] 2025-10-09 05:05:10,193 | INFO     | could have reported an average CPU frequency of 3703 MHz (6 samples)
[2025-10-09 07:05:31] 2025-10-09 05:05:10,193 | INFO     | ..............................
[2025-10-09 07:05:31] 2025-10-09 05:05:10,193 | INFO     | . Timing measurements:
[2025-10-09 07:05:31] 2025-10-09 05:05:10,193 | INFO     | . get job = 0 s
[2025-10-09 07:05:31] 2025-10-09 05:05:10,193 | INFO     | . initial setup = 1 s
[2025-10-09 07:05:31] 2025-10-09 05:05:10,193 | INFO     | . payload setup = 3 s
[2025-10-09 07:05:31] 2025-10-09 05:05:10,193 | INFO     | . stage-in = 0 s
[2025-10-09 07:05:31] 2025-10-09 05:05:10,193 | INFO     | . payload execution = 5130 s
[2025-10-09 07:05:31] 2025-10-09 05:05:10,193 | INFO     | . stage-out = 0 s
[2025-10-09 07:05:31] 2025-10-09 05:05:10,193 | INFO     | . log creation = 0 s
[2025-10-09 07:05:31] 2025-10-09 05:05:10,193 | INFO     | ..............................
[2025-10-09 07:05:31] 2025-10-09 05:05:10,422 | INFO     | time since job start (5162s) is within the limit (172800.0s)
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | 
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | job summary report
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | --------------------------------------------------
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | PanDA job id: 6835983541
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | task id: 46676269
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | errors: (none)
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | pilot state: finished 
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | transexitcode: 0
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | exeerrorcode: 0
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | exeerrordiag: 
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | exitcode: 0
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | exitmsg: OK
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | cpuconsumptiontime: 14792 s
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | nevents: 400
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | neventsw: 0
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | pid: 2970344
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | pgrp: 2970344
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | corecount: 3
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | event service: False
[2025-10-09 07:05:31] 2025-10-09 05:05:10,466 | INFO     | sizes: {0: 2348849, 2: 2349111, 10: 2349139, 5136: 2384733, 5140: 2384733, 5149: 2384927}
[2025-10-09 07:05:31] 2025-10-09 05:05:10,467 | INFO     | --------------------------------------------------
[2025-10-09 07:05:31] 2025-10-09 05:05:10,467 | INFO     | 
[2025-10-09 07:05:31] 2025-10-09 05:05:10,467 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-09 07:05:31] 2025-10-09 05:05:10,480 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | job 6835983541 has completed (purged errors)
[2025-10-09 07:05:31] 2025-10-09 05:05:10,481 | INFO     | overall cleanup function is called
[2025-10-09 07:05:31] 2025-10-09 05:05:11,485 | INFO     | --- collectZombieJob: --- 10, [2970344]
[2025-10-09 07:05:31] 2025-10-09 05:05:11,485 | INFO     | zombie collector waiting for pid 2970344
[2025-10-09 07:05:31] 2025-10-09 05:05:11,485 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 07:05:31] 2025-10-09 05:05:11,485 | INFO     | collected zombie processes
[2025-10-09 07:05:31] 2025-10-09 05:05:11,485 | INFO     | will attempt to kill all subprocesses of pid=2970344
[2025-10-09 07:05:31] 2025-10-09 05:05:11,536 | INFO     | process IDs to be killed: [2970344] (in reverse order)
[2025-10-09 07:05:31] 2025-10-09 05:05:11,561 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 07:05:31] 2025-10-09 05:05:11,562 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 07:05:31] 2025-10-09 05:05:11,563 | INFO     | did not find any defunct processes belonging to 2970344
[2025-10-09 07:05:31] 2025-10-09 05:05:11,565 | INFO     | did not find any defunct processes belonging to 2970344
[2025-10-09 07:05:31] 2025-10-09 05:05:11,565 | INFO     | ready for new job
[2025-10-09 07:05:31] 2025-10-09 05:05:11,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 07:05:31] 2025-10-09 05:05:11,565 | INFO     | ***************************************
[2025-10-09 07:05:31] 2025-10-09 05:05:11,565 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 07:05:31] 2025-10-09 05:05:11,565 | INFO     | ***************************************
[2025-10-09 07:05:31] 2025-10-09 05:05:11,565 | INFO     | 
[2025-10-09 07:05:31] 2025-10-09 05:05:11,566 | INFO     | architecture information:
[2025-10-09 07:05:31] 2025-10-09 05:05:11,566 | INFO     | executing command: cat /etc/os-release
[2025-10-09 07:05:31] 2025-10-09 05:05:11,575 | INFO     | cat /etc/os-release:
[2025-10-09 07:05:31] NAME="CentOS Linux"
[2025-10-09 07:05:31] VERSION="7 (Core)"
[2025-10-09 07:05:31] ID="centos"
[2025-10-09 07:05:31] ID_LIKE="rhel fedora"
[2025-10-09 07:05:31] VERSION_ID="7"
[2025-10-09 07:05:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 07:05:31] ANSI_COLOR="0;31"
[2025-10-09 07:05:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 07:05:31] HOME_URL="https://www.centos.org/"
[2025-10-09 07:05:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 07:05:31] 
[2025-10-09 07:05:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 07:05:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 07:05:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 07:05:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 07:05:31] 
[2025-10-09 07:05:31] 2025-10-09 05:05:11,575 | INFO     | ***************************************
[2025-10-09 07:05:31] 2025-10-09 05:05:12,078 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-09 07:05:31] 2025-10-09 05:05:12,091 | INFO     | sufficient remaining disk space (336337043456 B)
[2025-10-09 07:05:31] 2025-10-09 05:05:12,091 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 07:05:31] 2025-10-09 05:05:12,091 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 07:05:31] 2025-10-09 05:05:12,091 | INFO     | update_server=False
[2025-10-09 07:05:31] 2025-10-09 05:05:12,091 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 07:05:31] 2025-10-09 05:05:12,091 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 07:05:31] 2025-10-09 05:05:12,091 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-09 07:05:31] 2025-10-09 05:05:12,091 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 07:05:31] 2025-10-09 05:05:12,092 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 07:05:31] 2025-10-09 05:05:12,092 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 07:05:31] 2025-10-09 05:05:12,092 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 07:05:31] 2025-10-09 05:05:12,394 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 07:05:31] 2025-10-09 05:05:12,394 | INFO     | aborting loop
[2025-10-09 07:05:31] 2025-10-09 05:05:12,851 | INFO     | all payload control threads have been joined
[2025-10-09 07:05:31] 2025-10-09 05:05:13,095 | INFO     | [job] retrieve thread has finished
[2025-10-09 07:05:31] 2025-10-09 05:05:13,096 | INFO     | [job] queue monitor thread has finished
[2025-10-09 07:05:31] 2025-10-09 05:05:13,152 | INFO     | all data control threads have been joined
[2025-10-09 07:05:31] 2025-10-09 05:05:13,239 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 07:05:31] 2025-10-09 05:05:13,339 | INFO     | [payload] failed_post thread has finished
[2025-10-09 07:05:31] 2025-10-09 05:05:13,360 | INFO     | all job control threads have been joined
[2025-10-09 07:05:31] 2025-10-09 05:05:13,400 | INFO     | [job] job monitor thread has finished
[2025-10-09 07:05:31] 2025-10-09 05:05:13,471 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 07:05:31] 2025-10-09 05:05:13,646 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 07:05:31] 2025-10-09 05:05:13,856 | INFO     | [payload] control thread has finished
[2025-10-09 07:05:31] 2025-10-09 05:05:14,072 | INFO     | [data] copytool_in thread has finished
[2025-10-09 07:05:31] 2025-10-09 05:05:14,158 | INFO     | [data] control thread has finished
[2025-10-09 07:05:31] 2025-10-09 05:05:14,366 | INFO     | [job] control thread has finished
[2025-10-09 07:05:31] 2025-10-09 05:05:14,512 | INFO     | [job] validate thread has finished
[2025-10-09 07:05:31] 2025-10-09 05:05:14,519 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 07:05:31] 2025-10-09 05:05:14,678 | INFO     | [payload] validate_post thread has finished
[2025-10-09 07:05:31] 2025-10-09 05:05:14,748 | INFO     | [monitor] cgroup control has ended
[2025-10-09 07:05:31] 2025-10-09 05:05:15,475 | INFO     | [data] copytool_out thread has finished
[2025-10-09 07:05:31] 2025-10-09 05:05:16,098 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 07:05:31] 2025-10-09 05:05:23,037 | INFO     | job.realtimelogging is not enabled
[2025-10-09 07:05:31] 2025-10-09 05:05:24,043 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 07:05:31] 2025-10-09 05:05:25,914 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695629547328)>', '<ExcThread(monitor, started 139695019259648)>']
[2025-10-09 07:05:31] 2025-10-09 05:05:26,161 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 07:05:31] 2025-10-09 05:05:26,162 | INFO     | [monitor] control thread has ended
[2025-10-09 07:05:31] 2025-10-09 05:05:30,920 | INFO     | all workflow threads have been joined
[2025-10-09 07:05:31] 2025-10-09 05:05:30,920 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 07:05:31] 2025-10-09 05:05:30,920 | INFO     | traces error code: 0
[2025-10-09 07:05:31] 2025-10-09 05:05:30,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 07:05:31] 2025-10-09 05:05:30,969 [wrapper] ==== pilot stdout END ====
[2025-10-09 07:05:31] 2025-10-09 05:05:30,971 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 07:05:31] 2025-10-09 05:05:30,973 [wrapper] pilotpid: 2963892
[2025-10-09 07:05:31] 2025-10-09 05:05:30,976 [wrapper] Pilot exit status: 0
[2025-10-09 07:05:31] 2025-10-09 05:05:30,983 [wrapper] pandaids: 6835983541
[2025-10-09 07:05:31] 2025-10-09 05:05:31,001 [wrapper] cleanup supervisor_pilot 2987800 2963893
[2025-10-09 07:05:31] 2025-10-09 05:05:31,003 [wrapper] Test setup, not cleaning
[2025-10-09 07:05:31] 2025-10-09 05:05:31,006 [wrapper] apfmon messages muted
[2025-10-09 07:05:31] 2025-10-09 05:05:31,008 [wrapper] ==== wrapper stdout END ====
[2025-10-09 07:05:31] 2025-10-09 05:05:31,010 [wrapper] ==== wrapper stderr END ====
[2025-10-09 07:05:31]  *** Error codes and diagnostics ***
[2025-10-09 07:05:31]     "exeErrorCode": 0,
[2025-10-09 07:05:31]     "exeErrorDiag": "",
[2025-10-09 07:05:31]     "pilotErrorCode": 0,
[2025-10-09 07:05:31]     "pilotErrorDiag": "",
[2025-10-09 07:05:31]  *** Listing of results directory ***
[2025-10-09 07:05:31] total 413996
[2025-10-09 07:05:31] -rw-r--r-- 1 boinc boinc    557409 Oct  8 12:04 pilot3.tar.gz
[2025-10-09 07:05:31] -rwx------ 1 boinc boinc     36292 Oct  8 12:04 runpilot2-wrapper.sh
[2025-10-09 07:05:31] -rw-r--r-- 1 boinc boinc      5112 Oct  8 12:04 queuedata.json
[2025-10-09 07:05:31] -rw-r--r-- 1 boinc boinc       100 Oct  9 05:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 07:05:31] -rwxr-xr-x 1 boinc boinc      7986 Oct  9 05:39 run_atlas
[2025-10-09 07:05:31] -rw-r--r-- 1 boinc boinc       105 Oct  9 05:39 job.xml
[2025-10-09 07:05:31] -rw-r--r-- 2 boinc boinc 223524609 Oct  9 05:39 EVNT.46676267._000197.pool.root.1
[2025-10-09 07:05:31] -rw-r--r-- 2 boinc boinc    569671 Oct  9 05:39 input.tar.gz
[2025-10-09 07:05:31] -rw-r--r-- 2 boinc boinc     15120 Oct  9 05:39 start_atlas.sh
[2025-10-09 07:05:31] drwxrwx--x 2 boinc boinc      4096 Oct  9 05:39 shared
[2025-10-09 07:05:31] -rw-r--r-- 1 boinc boinc         0 Oct  9 05:39 boinc_setup_complete
[2025-10-09 07:05:31] -rw-r--r-- 1 boinc boinc      6443 Oct  9 05:39 init_data.xml
[2025-10-09 07:05:31] -rw-r--r-- 1 boinc boinc         0 Oct  9 05:39 boinc_lockfile
[2025-10-09 07:05:31] -rw-r--r-- 1 boinc boinc      2545 Oct  9 05:39 pandaJob.out
[2025-10-09 07:05:31] -rw------- 1 boinc boinc    979306 Oct  9 05:39 agis_schedconf.cvmfs.json
[2025-10-09 07:05:31] -rw------- 1 boinc boinc   1560401 Oct  9 05:39 agis_ddmendpoints.agis.ALL.json
[2025-10-09 07:05:31] drwx------ 5 boinc boinc      4096 Oct  9 05:39 pilot3
[2025-10-09 07:05:31] -rw------- 1 boinc boinc        95 Oct  9 07:04 pilot_heartbeat.json
[2025-10-09 07:05:31] -rw------- 1 boinc boinc 194508656 Oct  9 07:04 HITS.46676269._004981.pool.root.1
[2025-10-09 07:05:31] -rw-r--r-- 1 boinc boinc       529 Oct  9 07:04 boinc_task_state.xml
[2025-10-09 07:05:31] -rw------- 1 boinc boinc      1015 Oct  9 07:04 memory_monitor_summary.json
[2025-10-09 07:05:31] -rw------- 1 boinc boinc    240323 Oct  9 07:04 log.46676269._004981.job.log.tgz.1
[2025-10-09 07:05:31] -rw------- 1 boinc boinc      7765 Oct  9 07:05 heartbeat.json
[2025-10-09 07:05:31] -rw-r--r-- 1 boinc boinc        27 Oct  9 07:05 wrapper_checkpoint.txt
[2025-10-09 07:05:31] -rw-r--r-- 1 boinc boinc      8192 Oct  9 07:05 boinc_mmap_file
[2025-10-09 07:05:31] -rw------- 1 boinc boinc      4628 Oct  9 07:05 pilotlog.txt
[2025-10-09 07:05:31] -rw------- 1 boinc boinc    754001 Oct  9 07:05 log.46676269._004981.job.log.1
[2025-10-09 07:05:31] -rw------- 1 boinc boinc       357 Oct  9 07:05 output.list
[2025-10-09 07:05:31] -rw-r--r-- 1 boinc boinc       620 Oct  9 07:05 runtime_log
[2025-10-09 07:05:31] -rw------- 1 boinc boinc   1013760 Oct  9 07:05 result.tar.gz
[2025-10-09 07:05:31] -rw-r--r-- 1 boinc boinc      8797 Oct  9 07:05 runtime_log.err
[2025-10-09 07:05:31] -rw------- 1 boinc boinc       662 Oct  9 07:05 a4oLDmzCgQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjTMMDm43YSem.diag
[2025-10-09 07:05:31] -rw-r--r-- 1 boinc boinc     22359 Oct  9 07:05 stderr.txt
[2025-10-09 07:05:31] HITS file was successfully produced:
[2025-10-09 07:05:31] -rw------- 1 boinc boinc 194508656 Oct  9 07:04 shared/HITS.pool.root.1
[2025-10-09 07:05:31]  *** Contents of shared directory: ***
[2025-10-09 07:05:31] total 409816
[2025-10-09 07:05:31] -rw-r--r-- 2 boinc boinc 223524609 Oct  9 05:39 ATLAS.root_0
[2025-10-09 07:05:31] -rw-r--r-- 2 boinc boinc    569671 Oct  9 05:39 input.tar.gz
[2025-10-09 07:05:31] -rw-r--r-- 2 boinc boinc     15120 Oct  9 05:39 start_atlas.sh
[2025-10-09 07:05:31] -rw------- 1 boinc boinc 194508656 Oct  9 07:04 HITS.pool.root.1
[2025-10-09 07:05:31] -rw------- 1 boinc boinc   1013760 Oct  9 07:05 result.tar.gz
07:05:32 (2960169): run_atlas exited; CPU time 14816.252944
07:05:32 (2960169): called boinc_finish(0)

</stderr_txt>
]]>

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