Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:02:56 (7168): wrapper (7.7.26015): starting
22:02:56 (7168): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 22:02:56] Arguments: --nthreads 8
[2025-10-08 22:02:56] Threads: 8
[2025-10-08 22:02:56] Checking for CVMFS
[2025-10-08 22:02:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 22:02:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 22:02:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 22:02:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 22:02:57] 2.11.2.0 5808 100626 99488 151491 1 60 17259152 18432001 108 130560 0 55197086 99.974 3771853 3957 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-08 22:02:57] CVMFS is ok
[2025-10-08 22:02:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 22:02:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 22:02:57] Further information can be found at the LHC@home message board.
[2025-10-08 22:02:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 22:02:57] Checking for apptainer binary...
[2025-10-08 22:02:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 22:02:57] Running /usr/bin/apptainer --version
[2025-10-08 22:02:57] apptainer version 1.3.2-1.el7
[2025-10-08 22:02:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 22:02:57] c-9-34.aglt2.org
[2025-10-08 22:02:57] apptainer works
[2025-10-08 22:02:57] Set ATHENA_PROC_NUMBER=8
[2025-10-08 22:02:57] Set ATHENA_CORE_NUMBER=8
[2025-10-08 22:02:57] Starting ATLAS job with PandaID=6836606511
[2025-10-08 22:02:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 23:41:21]  *** The last 200 lines of the pilot log: ***
[2025-10-08 23:41:21]  is_altstaged=None
[2025-10-08 23:41:21]  is_tar=False
[2025-10-08 23:41:21]  lfn=log.46676269._011306.job.log.tgz.1
[2025-10-08 23:41:21]  mtime=0
[2025-10-08 23:41:21]  protocol_id=None
[2025-10-08 23:41:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-08 23:41:21]  replicas=None
[2025-10-08 23:41:21]  scope=mc23_13p6TeV
[2025-10-08 23:41:21]  status=None
[2025-10-08 23:41:21]  status_code=0
[2025-10-08 23:41:21]  storage_token=
[2025-10-08 23:41:21]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6836606511/log.46676269._011306.job.log.tgz.1
[2025-10-08 23:41:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/80/log.46676269._011306.job.log.tgz.1
[2025-10-08 23:41:21]  workdir=None
[2025-10-08 23:41:21] ]
[2025-10-08 23:41:21] 2025-10-09 03:40:30,041 | INFO     | transferring file log.46676269._011306.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6836606511/log.46676269._011306.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-08 23:41:21] 2025-10-09 03:40:30,041 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6836606511/log.46676269._011306.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._011306.job
[2025-10-08 23:41:21] 2025-10-09 03:40:30,052 | INFO     | adding to output.list: log.46676269._011306.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/80/log.46676269._011306.job.log.tg
[2025-10-08 23:41:21] 2025-10-09 03:40:30,053 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-08 23:41:21] 2025-10-09 03:40:30,053 | INFO     | summary of transferred files:
[2025-10-08 23:41:21] 2025-10-09 03:40:30,053 | INFO     |  -- lfn=log.46676269._011306.job.log.tgz.1, status_code=0, status=transferred
[2025-10-08 23:41:21] 2025-10-09 03:40:30,053 | INFO     | stage-out finished correctly
[2025-10-08 23:41:21] 2025-10-09 03:40:30,115 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-08 23:41:21] 2025-10-09 03:40:30,175 | INFO     | job 6836606511 has state=finished
[2025-10-08 23:41:21] 2025-10-09 03:40:30,176 | INFO     | preparing for final server update for job 6836606511 in state='finished'
[2025-10-08 23:41:21] 2025-10-09 03:40:30,176 | INFO     | this job has now completed (state=finished)
[2025-10-08 23:41:21] 2025-10-09 03:40:30,176 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-08 23:41:21] 2025-10-09 03:40:30,176 | INFO     | log transfer has been attempted: DONE
[2025-10-08 23:41:21] 2025-10-09 03:40:30,176 | INFO     | job 6836606511 has finished - writing final server update
[2025-10-08 23:41:21] 2025-10-09 03:40:30,177 | INFO     | total number of processed events: 400 (read)
[2025-10-08 23:41:21] 2025-10-09 03:40:30,177 | INFO     | executing command: lscpu
[2025-10-08 23:41:21] 2025-10-09 03:40:30,197 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 23:41:21] 2025-10-09 03:40:30,622 | INFO     | time since job start (5843s) is within the limit (172800.0s)
[2025-10-08 23:41:21] 2025-10-09 03:40:32,041 | INFO     | monitor loop #437: job 0:6836606511 is in state 'finished'
[2025-10-08 23:41:21] 2025-10-09 03:40:32,041 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:41:21] 2025-10-09 03:40:32,624 | INFO     | time since job start (5845s) is within the limit (172800.0s)
[2025-10-08 23:41:21] 2025-10-09 03:40:32,948 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-08 23:41:21] 2025-10-09 03:40:32,952 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 3017.293593750001
[2025-10-08 23:41:21] 2025-10-09 03:40:32,955 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6836606511/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 23:41:21] 2025-10-09 03:40:32,956 | INFO     | extracted standard info from prmon json
[2025-10-08 23:41:21] 2025-10-09 03:40:32,956 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 23:41:21] 2025-10-09 03:40:32,956 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 23:41:21] 2025-10-09 03:40:32,956 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 23:41:21] 2025-10-09 03:40:32,956 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 23:41:21] 2025-10-09 03:40:32,958 | INFO     | fitting pss+swap vs Time
[2025-10-08 23:41:21] 2025-10-09 03:40:32,958 | INFO     | sum of square deviations: 218571540.0
[2025-10-08 23:41:21] 2025-10-09 03:40:32,958 | INFO     | sum of deviations: 219281458.00000003
[2025-10-08 23:41:21] 2025-10-09 03:40:32,958 | INFO     | mean x: 1759978398.0
[2025-10-08 23:41:21] 2025-10-09 03:40:32,958 | INFO     | mean y: 2500477.629213483
[2025-10-08 23:41:21] 2025-10-09 03:40:32,959 | INFO     | -- intersect: -1763194311.1888747
[2025-10-08 23:41:21] 2025-10-09 03:40:32,959 | INFO     | intersect: -1763194311.1888747
[2025-10-08 23:41:21] 2025-10-09 03:40:32,959 | INFO     | chi2: 0.0010030774547684963
[2025-10-08 23:41:21] 2025-10-09 03:40:32,959 | INFO     | -- intersect: -1763194311.1888747
[2025-10-08 23:41:21] 2025-10-09 03:40:32,959 | INFO     | current memory leak: 1.00 B/s (using 89 data points, chi2=0.00)
[2025-10-08 23:41:21] 2025-10-09 03:40:32,959 | INFO     | could have reported an average CPU frequency of 2985 MHz (7 samples)
[2025-10-08 23:41:21] 2025-10-09 03:40:32,959 | INFO     | ..............................
[2025-10-08 23:41:21] 2025-10-09 03:40:32,960 | INFO     | . Timing measurements:
[2025-10-08 23:41:21] 2025-10-09 03:40:32,960 | INFO     | . get job = 0 s
[2025-10-08 23:41:21] 2025-10-09 03:40:32,960 | INFO     | . initial setup = 2 s
[2025-10-08 23:41:21] 2025-10-09 03:40:32,960 | INFO     | . payload setup = 4 s
[2025-10-08 23:41:21] 2025-10-09 03:40:32,960 | INFO     | . stage-in = 0 s
[2025-10-08 23:41:21] 2025-10-09 03:40:32,960 | INFO     | . payload execution = 5820 s
[2025-10-08 23:41:21] 2025-10-09 03:40:32,960 | INFO     | . stage-out = 0 s
[2025-10-08 23:41:21] 2025-10-09 03:40:32,960 | INFO     | . log creation = 0 s
[2025-10-08 23:41:21] 2025-10-09 03:40:32,960 | INFO     | ..............................
[2025-10-08 23:41:21] 2025-10-09 03:40:33,021 | INFO     | 
[2025-10-08 23:41:21] 2025-10-09 03:40:33,021 | INFO     | job summary report
[2025-10-08 23:41:21] 2025-10-09 03:40:33,021 | INFO     | --------------------------------------------------
[2025-10-08 23:41:21] 2025-10-09 03:40:33,021 | INFO     | PanDA job id: 6836606511
[2025-10-08 23:41:21] 2025-10-09 03:40:33,021 | INFO     | task id: 46676269
[2025-10-08 23:41:21] 2025-10-09 03:40:33,021 | INFO     | errors: (none)
[2025-10-08 23:41:21] 2025-10-09 03:40:33,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 23:41:21] 2025-10-09 03:40:33,021 | INFO     | pilot state: finished 
[2025-10-08 23:41:21] 2025-10-09 03:40:33,021 | INFO     | transexitcode: 0
[2025-10-08 23:41:21] 2025-10-09 03:40:33,021 | INFO     | exeerrorcode: 0
[2025-10-08 23:41:21] 2025-10-09 03:40:33,022 | INFO     | exeerrordiag: 
[2025-10-08 23:41:21] 2025-10-09 03:40:33,022 | INFO     | exitcode: 0
[2025-10-08 23:41:21] 2025-10-09 03:40:33,022 | INFO     | exitmsg: OK
[2025-10-08 23:41:21] 2025-10-09 03:40:33,022 | INFO     | cpuconsumptiontime: 43185 s
[2025-10-08 23:41:21] 2025-10-09 03:40:33,022 | INFO     | nevents: 400
[2025-10-08 23:41:21] 2025-10-09 03:40:33,022 | INFO     | neventsw: 0
[2025-10-08 23:41:21] 2025-10-09 03:40:33,022 | INFO     | pid: 31045
[2025-10-08 23:41:21] 2025-10-09 03:40:33,022 | INFO     | pgrp: 31045
[2025-10-08 23:41:21] 2025-10-09 03:40:33,022 | INFO     | corecount: 8
[2025-10-08 23:41:21] 2025-10-09 03:40:33,022 | INFO     | event service: False
[2025-10-08 23:41:21] 2025-10-09 03:40:33,022 | INFO     | sizes: {0: 2348628, 1: 2348883, 4: 2349145, 12: 2349173, 5828: 2375980, 5829: 2385162, 5832: 2385300}
[2025-10-08 23:41:21] 2025-10-09 03:40:33,022 | INFO     | --------------------------------------------------
[2025-10-08 23:41:21] 2025-10-09 03:40:33,023 | INFO     | 
[2025-10-08 23:41:21] 2025-10-09 03:40:33,023 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-08 23:41:21] 2025-10-09 03:40:33,035 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,035 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,035 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,035 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,035 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,036 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 23:41:21] 2025-10-09 03:40:33,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,037 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 23:41:21] 2025-10-09 03:40:33,037 | INFO     | job 6836606511 has completed (purged errors)
[2025-10-08 23:41:21] 2025-10-09 03:40:33,037 | INFO     | overall cleanup function is called
[2025-10-08 23:41:21] 2025-10-09 03:40:34,043 | INFO     | --- collectZombieJob: --- 10, [31045]
[2025-10-08 23:41:21] 2025-10-09 03:40:34,043 | INFO     | zombie collector waiting for pid 31045
[2025-10-08 23:41:21] 2025-10-09 03:40:34,043 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 23:41:21] 2025-10-09 03:40:34,043 | INFO     | collected zombie processes
[2025-10-08 23:41:21] 2025-10-09 03:40:34,044 | INFO     | will attempt to kill all subprocesses of pid=31045
[2025-10-08 23:41:21] 2025-10-09 03:40:34,213 | INFO     | process IDs to be killed: [31045] (in reverse order)
[2025-10-08 23:41:21] 2025-10-09 03:40:34,265 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 23:41:21] 2025-10-09 03:40:34,265 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 23:41:21] 2025-10-09 03:40:34,270 | INFO     | did not find any defunct processes belonging to 31045
[2025-10-08 23:41:21] 2025-10-09 03:40:34,274 | INFO     | did not find any defunct processes belonging to 31045
[2025-10-08 23:41:21] 2025-10-09 03:40:34,274 | INFO     | ready for new job
[2025-10-08 23:41:21] 2025-10-09 03:40:34,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 23:41:21] 2025-10-09 03:40:34,276 | INFO     | ***************************************
[2025-10-08 23:41:21] 2025-10-09 03:40:34,276 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 23:41:21] 2025-10-09 03:40:34,276 | INFO     | ***************************************
[2025-10-08 23:41:21] 2025-10-09 03:40:34,276 | INFO     | 
[2025-10-08 23:41:21] 2025-10-09 03:40:34,277 | INFO     | architecture information:
[2025-10-08 23:41:21] 2025-10-09 03:40:34,277 | INFO     | executing command: cat /etc/os-release
[2025-10-08 23:41:21] 2025-10-09 03:40:34,286 | INFO     | cat /etc/os-release:
[2025-10-08 23:41:21] NAME="CentOS Linux"
[2025-10-08 23:41:21] VERSION="7 (Core)"
[2025-10-08 23:41:21] ID="centos"
[2025-10-08 23:41:21] ID_LIKE="rhel fedora"
[2025-10-08 23:41:21] VERSION_ID="7"
[2025-10-08 23:41:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 23:41:21] ANSI_COLOR="0;31"
[2025-10-08 23:41:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 23:41:21] HOME_URL="https://www.centos.org/"
[2025-10-08 23:41:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 23:41:21] 
[2025-10-08 23:41:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 23:41:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 23:41:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 23:41:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 23:41:21] 
[2025-10-08 23:41:21] 2025-10-09 03:40:34,286 | INFO     | ***************************************
[2025-10-08 23:41:21] 2025-10-09 03:40:34,788 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-08 23:41:21] 2025-10-09 03:40:34,798 | INFO     | sufficient remaining disk space (105966993408 B)
[2025-10-08 23:41:21] 2025-10-09 03:40:34,799 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 23:41:21] 2025-10-09 03:40:34,799 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 23:41:21] 2025-10-09 03:40:34,799 | INFO     | update_server=False
[2025-10-08 23:41:21] 2025-10-09 03:40:34,799 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 23:41:21] 2025-10-09 03:40:34,799 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 23:41:21] 2025-10-09 03:40:35,183 | INFO     | all data control threads have been joined
[2025-10-08 23:41:21] 2025-10-09 03:40:35,548 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 23:41:21] 2025-10-09 03:40:35,548 | INFO     | aborting loop
[2025-10-08 23:41:21] 2025-10-09 03:40:35,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 23:41:21] 2025-10-09 03:40:35,778 | INFO     | all job control threads have been joined
[2025-10-08 23:41:21] 2025-10-09 03:40:35,804 | INFO     | [job] queue monitor thread has finished
[2025-10-08 23:41:21] 2025-10-09 03:40:35,805 | INFO     | [job] retrieve thread has finished
[2025-10-08 23:41:21] 2025-10-09 03:40:35,819 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 23:41:21] 2025-10-09 03:40:36,049 | INFO     | all payload control threads have been joined
[2025-10-08 23:41:21] 2025-10-09 03:40:36,181 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 23:41:21] 2025-10-09 03:40:36,188 | INFO     | [data] control thread has finished
[2025-10-08 23:41:21] 2025-10-09 03:40:36,220 | INFO     | [job] validate thread has finished
[2025-10-08 23:41:21] 2025-10-09 03:40:36,276 | INFO     | [payload] validate_post thread has finished
[2025-10-08 23:41:21] 2025-10-09 03:40:36,507 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 23:41:21] 2025-10-09 03:40:36,549 | INFO     | [job] job monitor thread has finished
[2025-10-08 23:41:21] 2025-10-09 03:40:36,625 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 23:41:21] 2025-10-09 03:40:36,684 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 23:41:21] 2025-10-09 03:40:36,723 | INFO     | [data] copytool_in thread has finished
[2025-10-08 23:41:21] 2025-10-09 03:40:36,783 | INFO     | [job] control thread has finished
[2025-10-08 23:41:21] 2025-10-09 03:40:37,055 | INFO     | [payload] control thread has finished
[2025-10-08 23:41:21] 2025-10-09 03:40:37,293 | INFO     | [payload] failed_post thread has finished
[2025-10-08 23:41:21] 2025-10-09 03:40:37,629 | INFO     | [data] copytool_out thread has finished
[2025-10-08 23:41:21] 2025-10-09 03:40:40,186 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 23:41:21] 2025-10-09 03:41:05,901 | INFO     | PID=12397 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-08 23:41:21] 2025-10-09 03:41:05,901 | INFO     | .. there are 2 such processes running
[2025-10-08 23:41:21] 2025-10-09 03:41:05,901 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 23:41:21] 2025-10-09 03:41:05,901 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 23:41:21] 2025-10-09 03:41:05,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 23:41:21] 2025-10-09 03:41:15,032 | INFO     | [monitor] cgroup control has ended
[2025-10-08 23:41:21] 2025-10-09 03:41:16,047 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914096133952)>', '<ExcThread(monitor, started 139913366324992)>']
[2025-10-08 23:41:21] 2025-10-09 03:41:16,947 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 23:41:21] 2025-10-09 03:41:16,947 | INFO     | [monitor] control thread has ended
[2025-10-08 23:41:21] 2025-10-09 03:41:21,068 | INFO     | all workflow threads have been joined
[2025-10-08 23:41:21] 2025-10-09 03:41:21,068 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 23:41:21] 2025-10-09 03:41:21,068 | INFO     | traces error code: 0
[2025-10-08 23:41:21] 2025-10-09 03:41:21,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 23:41:21] 2025-10-09 03:41:21,138 [wrapper] ==== pilot stdout END ====
[2025-10-08 23:41:21] 2025-10-09 03:41:21,140 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 23:41:21] 2025-10-09 03:41:21,142 [wrapper] pilotpid: 12397
[2025-10-08 23:41:21] 2025-10-09 03:41:21,144 [wrapper] Pilot exit status: 0
[2025-10-08 23:41:21] 2025-10-09 03:41:21,150 [wrapper] pandaids: 6836606511
[2025-10-08 23:41:21] 2025-10-09 03:41:21,189 [wrapper] cleanup supervisor_pilot 42877 12398
[2025-10-08 23:41:21] 2025-10-09 03:41:21,191 [wrapper] Test setup, not cleaning
[2025-10-08 23:41:21] 2025-10-09 03:41:21,193 [wrapper] apfmon messages muted
[2025-10-08 23:41:21] 2025-10-09 03:41:21,194 [wrapper] ==== wrapper stdout END ====
[2025-10-08 23:41:21] 2025-10-09 03:41:21,196 [wrapper] ==== wrapper stderr END ====
[2025-10-08 23:41:21]  *** Error codes and diagnostics ***
[2025-10-08 23:41:21]     "exeErrorCode": 0,
[2025-10-08 23:41:21]     "exeErrorDiag": "",
[2025-10-08 23:41:21]     "pilotErrorCode": 0,
[2025-10-08 23:41:21]     "pilotErrorDiag": "",
[2025-10-08 23:41:21]  *** Listing of results directory ***
[2025-10-08 23:41:21] total 416580
[2025-10-08 23:41:21] -rw-r--r-- 1 boincer umatlas    557409 Oct  8 19:22 pilot3.tar.gz
[2025-10-08 23:41:21] -rwx------ 1 boincer umatlas     36292 Oct  8 19:37 runpilot2-wrapper.sh
[2025-10-08 23:41:21] -rw-r--r-- 1 boincer umatlas      5112 Oct  8 19:37 queuedata.json
[2025-10-08 23:41:21] -rw-r--r-- 1 boincer umatlas       100 Oct  8 22:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 23:41:21] -rwxr-xr-x 1 boincer umatlas      7986 Oct  8 22:02 run_atlas
[2025-10-08 23:41:21] -rw-r--r-- 1 boincer umatlas       105 Oct  8 22:02 job.xml
[2025-10-08 23:41:21] -rw-r--r-- 2 boincer umatlas 222461601 Oct  8 22:02 EVNT.46676267._000461.pool.root.1
[2025-10-08 23:41:21] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 22:02 start_atlas.sh
[2025-10-08 23:41:21] drwxrwx--x 2 boincer umatlas      4096 Oct  8 22:02 shared
[2025-10-08 23:41:21] -rw-r--r-- 2 boincer umatlas    569669 Oct  8 22:02 input.tar.gz
[2025-10-08 23:41:21] -rw-r--r-- 1 boincer umatlas         0 Oct  8 22:02 boinc_lockfile
[2025-10-08 23:41:21] -rw-r--r-- 1 boincer umatlas      2549 Oct  8 22:02 pandaJob.out
[2025-10-08 23:41:21] -rw------- 1 boincer umatlas    979290 Oct  8 22:03 agis_schedconf.cvmfs.json
[2025-10-08 23:41:21] -rw------- 1 boincer umatlas   1560401 Oct  8 22:03 agis_ddmendpoints.agis.ALL.json
[2025-10-08 23:41:21] drwx------ 5 boincer umatlas      4096 Oct  8 22:03 pilot3
[2025-10-08 23:41:21] -rw-r--r-- 1 boincer umatlas      6035 Oct  8 23:37 init_data.xml
[2025-10-08 23:41:21] -rw------- 1 boincer umatlas 197818589 Oct  8 23:40 HITS.46676269._011306.pool.root.1
[2025-10-08 23:41:21] -rw------- 1 boincer umatlas      1044 Oct  8 23:40 memory_monitor_summary.json
[2025-10-08 23:41:21] -rw------- 1 boincer umatlas    343823 Oct  8 23:40 log.46676269._011306.job.log.tgz.1
[2025-10-08 23:41:21] -rw------- 1 boincer umatlas      7829 Oct  8 23:40 heartbeat.json
[2025-10-08 23:41:21] -rw------- 1 boincer umatlas        95 Oct  8 23:40 pilot_heartbeat.json
[2025-10-08 23:41:21] -rw-r--r-- 1 boincer umatlas       529 Oct  8 23:40 boinc_task_state.xml
[2025-10-08 23:41:21] -rw-r--r-- 1 boincer umatlas      8192 Oct  8 23:41 boinc_mmap_file
[2025-10-08 23:41:21] -rw-r--r-- 1 boincer umatlas        27 Oct  8 23:41 wrapper_checkpoint.txt
[2025-10-08 23:41:21] -rw------- 1 boincer umatlas      4822 Oct  8 23:41 pilotlog.txt
[2025-10-08 23:41:21] -rw------- 1 boincer umatlas    855891 Oct  8 23:41 log.46676269._011306.job.log.1
[2025-10-08 23:41:21] -rw------- 1 boincer umatlas       357 Oct  8 23:41 output.list
[2025-10-08 23:41:21] -rw-r--r-- 1 boincer umatlas       620 Oct  8 23:41 runtime_log
[2025-10-08 23:41:21] -rw------- 1 boincer umatlas   1218560 Oct  8 23:41 result.tar.gz
[2025-10-08 23:41:21] -rw-r--r-- 1 boincer umatlas      8693 Oct  8 23:41 runtime_log.err
[2025-10-08 23:41:21] -rw------- 1 boincer umatlas       655 Oct  8 23:41 K8cNDmNusQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUtYNDm0Z5vUm.diag
[2025-10-08 23:41:21] -rw-r--r-- 1 boincer umatlas     21423 Oct  8 23:41 stderr.txt
[2025-10-08 23:41:21] HITS file was successfully produced:
[2025-10-08 23:41:21] -rw------- 1 boincer umatlas 197818589 Oct  8 23:40 shared/HITS.pool.root.1
[2025-10-08 23:41:21]  *** Contents of shared directory: ***
[2025-10-08 23:41:21] total 412204
[2025-10-08 23:41:21] -rw-r--r-- 2 boincer umatlas 222461601 Oct  8 22:02 ATLAS.root_0
[2025-10-08 23:41:21] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 22:02 start_atlas.sh
[2025-10-08 23:41:21] -rw-r--r-- 2 boincer umatlas    569669 Oct  8 22:02 input.tar.gz
[2025-10-08 23:41:21] -rw------- 1 boincer umatlas 197818589 Oct  8 23:40 HITS.pool.root.1
[2025-10-08 23:41:21] -rw------- 1 boincer umatlas   1218560 Oct  8 23:41 result.tar.gz
23:41:22 (7168): run_atlas exited; CPU time 43307.917577
23:41:22 (7168): called boinc_finish(0)

</stderr_txt>
]]>

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