Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:59:43 (3057043): wrapper (7.7.26015): starting
21:59:43 (3057043): wrapper: running run_atlas (--nthreads 10)
[2025-10-08 21:59:43] Arguments: --nthreads 10
[2025-10-08 21:59:43] Threads: 10
[2025-10-08 21:59:43] Checking for CVMFS
[2025-10-08 21:59:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 21:59:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 21:59:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 21:59:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 21:59:44] 2.13.2.0 2754702 124296 502288 151491 1 637 23294484 32935937 45249 16776704 0 772319946 99.687 643199662 33712 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-08 21:59:44] CVMFS is ok
[2025-10-08 21:59:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 21:59:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 21:59:44] Further information can be found at the LHC@home message board.
[2025-10-08 21:59:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 21:59:44] Checking for apptainer binary...
[2025-10-08 21:59:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 21:59:44] Running /usr/bin/apptainer --version
[2025-10-08 21:59:44] apptainer version 1.4.3-1.el9
[2025-10-08 21:59:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 21:59:44] c7-9-14.aglt2.org
[2025-10-08 21:59:44] apptainer works
[2025-10-08 21:59:44] Set ATHENA_PROC_NUMBER=10
[2025-10-08 21:59:44] Set ATHENA_CORE_NUMBER=10
[2025-10-08 21:59:44] Starting ATLAS job with PandaID=6836603487
[2025-10-08 21:59:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 23:18:18]  *** The last 200 lines of the pilot log: ***
[2025-10-08 23:18:18] 2025-10-09 03:17:07,957 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:18:18] 2025-10-09 03:17:08,754 | INFO     | time since job start (4627s) is within the limit (172800.0s)
[2025-10-08 23:18:18] 2025-10-09 03:17:10,462 | INFO     | monitor loop #294: job 0:6836603487 is in state 'finished'
[2025-10-08 23:18:18] 2025-10-09 03:17:10,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:18:18] 2025-10-09 03:17:10,761 | INFO     | time since job start (4629s) is within the limit (172800.0s)
[2025-10-08 23:18:18] 2025-10-09 03:17:12,775 | INFO     | time since job start (4631s) is within the limit (172800.0s)
[2025-10-08 23:18:18] 2025-10-09 03:17:12,975 | INFO     | monitor loop #295: job 0:6836603487 is in state 'finished'
[2025-10-08 23:18:18] 2025-10-09 03:17:12,976 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:18:18] 2025-10-09 03:17:14,803 | INFO     | time since job start (4633s) is within the limit (172800.0s)
[2025-10-08 23:18:18] 2025-10-09 03:17:15,484 | INFO     | monitor loop #296: job 0:6836603487 is in state 'finished'
[2025-10-08 23:18:18] 2025-10-09 03:17:15,485 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:18:18] 2025-10-09 03:17:16,811 | INFO     | time since job start (4635s) is within the limit (172800.0s)
[2025-10-08 23:18:18] 2025-10-09 03:17:16,811 | INFO     | 4637s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-08 23:18:18] 2025-10-09 03:17:17,989 | INFO     | monitor loop #297: job 0:6836603487 is in state 'finished'
[2025-10-08 23:18:18] 2025-10-09 03:17:17,990 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:18:18] 2025-10-09 03:17:19,826 | INFO     | PID=3062280 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 23:18:18] 2025-10-09 03:17:19,826 | INFO     | .. there are 61 such processes running
[2025-10-08 23:18:18] 2025-10-09 03:17:20,498 | INFO     | monitor loop #298: job 0:6836603487 is in state 'finished'
[2025-10-08 23:18:18] 2025-10-09 03:17:20,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:18:18] 2025-10-09 03:17:20,827 | INFO     | time since job start (4639s) is within the limit (172800.0s)
[2025-10-08 23:18:18] 2025-10-09 03:17:22,846 | INFO     | time since job start (4641s) is within the limit (172800.0s)
[2025-10-08 23:18:18] 2025-10-09 03:17:23,003 | INFO     | monitor loop #299: job 0:6836603487 is in state 'finished'
[2025-10-08 23:18:18] 2025-10-09 03:17:23,004 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:18:18] 2025-10-09 03:17:24,854 | INFO     | time since job start (4643s) is within the limit (172800.0s)
[2025-10-08 23:18:18] 2025-10-09 03:17:25,510 | INFO     | monitor loop #300: job 0:6836603487 is in state 'finished'
[2025-10-08 23:18:18] 2025-10-09 03:17:25,511 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:18:18] 2025-10-09 03:17:26,861 | INFO     | time since job start (4645s) is within the limit (172800.0s)
[2025-10-08 23:18:18] 2025-10-09 03:17:28,015 | INFO     | monitor loop #301: job 0:6836603487 is in state 'finished'
[2025-10-08 23:18:18] 2025-10-09 03:17:28,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:18:18] 2025-10-09 03:17:28,868 | INFO     | time since job start (4647s) is within the limit (172800.0s)
[2025-10-08 23:18:18] 2025-10-09 03:17:30,520 | INFO     | monitor loop #302: job 0:6836603487 is in state 'finished'
[2025-10-08 23:18:18] 2025-10-09 03:17:30,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:18:18] 2025-10-09 03:17:30,875 | INFO     | time since job start (4649s) is within the limit (172800.0s)
[2025-10-08 23:18:18] 2025-10-09 03:17:32,886 | INFO     | time since job start (4651s) is within the limit (172800.0s)
[2025-10-08 23:18:18] 2025-10-09 03:17:33,025 | INFO     | monitor loop #303: job 0:6836603487 is in state 'finished'
[2025-10-08 23:18:18] 2025-10-09 03:17:33,026 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:18:18] 2025-10-09 03:17:33,484 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-08 23:18:18] 2025-10-09 03:17:33,499 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3775.5727578124993
[2025-10-08 23:18:18] 2025-10-09 03:17:33,563 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6836603487/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 23:18:18] 2025-10-09 03:17:33,564 | INFO     | extracted standard info from prmon json
[2025-10-08 23:18:18] 2025-10-09 03:17:33,564 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 23:18:18] 2025-10-09 03:17:33,564 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 23:18:18] 2025-10-09 03:17:33,580 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 23:18:18] 2025-10-09 03:17:33,580 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 23:18:18] 2025-10-09 03:17:33,581 | INFO     | fitting pss+swap vs Time
[2025-10-08 23:18:18] 2025-10-09 03:17:33,581 | INFO     | sum of square deviations: 97479037.0
[2025-10-08 23:18:18] 2025-10-09 03:17:33,581 | INFO     | sum of deviations: 714801599.0
[2025-10-08 23:18:18] 2025-10-09 03:17:33,581 | INFO     | mean x: 1759977588.5
[2025-10-08 23:18:18] 2025-10-09 03:17:33,581 | INFO     | mean y: 2275504.1764705884
[2025-10-08 23:18:18] 2025-10-09 03:17:33,581 | INFO     | -- intersect: -12903420255.456076
[2025-10-08 23:18:18] 2025-10-09 03:17:33,582 | INFO     | intersect: -12903420255.456076
[2025-10-08 23:18:18] 2025-10-09 03:17:33,582 | INFO     | chi2: 0.01387440361986664
[2025-10-08 23:18:18] 2025-10-09 03:17:33,582 | INFO     | -- intersect: -12903420255.456076
[2025-10-08 23:18:18] 2025-10-09 03:17:33,582 | INFO     | current memory leak: 7.33 B/s (using 68 data points, chi2=0.01)
[2025-10-08 23:18:18] 2025-10-09 03:17:33,582 | INFO     | could have reported an average CPU frequency of 3775 MHz (6 samples)
[2025-10-08 23:18:18] 2025-10-09 03:17:33,582 | INFO     | ..............................
[2025-10-08 23:18:18] 2025-10-09 03:17:33,582 | INFO     | . Timing measurements:
[2025-10-08 23:18:18] 2025-10-09 03:17:33,582 | INFO     | . get job = 0 s
[2025-10-08 23:18:18] 2025-10-09 03:17:33,582 | INFO     | . initial setup = 2 s
[2025-10-08 23:18:18] 2025-10-09 03:17:33,582 | INFO     | . payload setup = 9 s
[2025-10-08 23:18:18] 2025-10-09 03:17:33,582 | INFO     | . stage-in = 0 s
[2025-10-08 23:18:18] 2025-10-09 03:17:33,582 | INFO     | . payload execution = 4574 s
[2025-10-08 23:18:18] 2025-10-09 03:17:33,582 | INFO     | . stage-out = 2 s
[2025-10-08 23:18:18] 2025-10-09 03:17:33,582 | INFO     | . log creation = 0 s
[2025-10-08 23:18:18] 2025-10-09 03:17:33,582 | INFO     | ..............................
[2025-10-08 23:18:18] 2025-10-09 03:17:33,818 | INFO     | 
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | job summary report
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | --------------------------------------------------
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | PanDA job id: 6836603487
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | task id: 46676269
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | errors: (none)
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | pilot state: finished 
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | transexitcode: 0
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | exeerrorcode: 0
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | exeerrordiag: 
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | exitcode: 0
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | exitmsg: OK
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | cpuconsumptiontime: 22851 s
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | nevents: 400
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | neventsw: 0
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | pid: 3081877
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | pgrp: 3081877
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | corecount: 10
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | event service: False
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | sizes: {0: 2348680, 1: 2348879, 8: 2349141, 11: 2349169, 4588: 2375302, 4592: 2384484, 4632: 2384622}
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | --------------------------------------------------
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | 
[2025-10-08 23:18:18] 2025-10-09 03:17:33,819 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-08 23:18:18] 2025-10-09 03:17:33,910 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,910 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,910 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,910 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,910 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,910 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,910 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,911 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,911 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 23:18:18] 2025-10-09 03:17:33,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,911 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 23:18:18] 2025-10-09 03:17:33,911 | INFO     | job 6836603487 has completed (purged errors)
[2025-10-08 23:18:18] 2025-10-09 03:17:33,911 | INFO     | overall cleanup function is called
[2025-10-08 23:18:18] 2025-10-09 03:17:34,918 | INFO     | --- collectZombieJob: --- 10, [3081877]
[2025-10-08 23:18:18] 2025-10-09 03:17:34,919 | INFO     | zombie collector waiting for pid 3081877
[2025-10-08 23:18:18] 2025-10-09 03:17:34,919 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 23:18:18] 2025-10-09 03:17:34,919 | INFO     | collected zombie processes
[2025-10-08 23:18:18] 2025-10-09 03:17:34,919 | INFO     | will attempt to kill all subprocesses of pid=3081877
[2025-10-08 23:18:18] 2025-10-09 03:17:36,721 | INFO     | process IDs to be killed: [3081877] (in reverse order)
[2025-10-08 23:18:18] 2025-10-09 03:17:37,375 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 23:18:18] 2025-10-09 03:17:37,375 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 23:18:18] 2025-10-09 03:17:37,494 | INFO     | did not find any defunct processes belonging to 3081877
[2025-10-08 23:18:18] 2025-10-09 03:17:37,616 | INFO     | did not find any defunct processes belonging to 3081877
[2025-10-08 23:18:18] 2025-10-09 03:17:37,640 | INFO     | ready for new job
[2025-10-08 23:18:18] 2025-10-09 03:17:37,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 23:18:18] 2025-10-09 03:17:37,641 | INFO     | ***************************************
[2025-10-08 23:18:18] 2025-10-09 03:17:37,641 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 23:18:18] 2025-10-09 03:17:37,641 | INFO     | ***************************************
[2025-10-08 23:18:18] 2025-10-09 03:17:37,641 | INFO     | 
[2025-10-08 23:18:18] 2025-10-09 03:17:37,684 | INFO     | architecture information:
[2025-10-08 23:18:18] 2025-10-09 03:17:37,689 | INFO     | executing command: cat /etc/os-release
[2025-10-08 23:18:18] 2025-10-09 03:17:37,793 | INFO     | cat /etc/os-release:
[2025-10-08 23:18:18] NAME="CentOS Linux"
[2025-10-08 23:18:18] VERSION="7 (Core)"
[2025-10-08 23:18:18] ID="centos"
[2025-10-08 23:18:18] ID_LIKE="rhel fedora"
[2025-10-08 23:18:18] VERSION_ID="7"
[2025-10-08 23:18:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 23:18:18] ANSI_COLOR="0;31"
[2025-10-08 23:18:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 23:18:18] HOME_URL="https://www.centos.org/"
[2025-10-08 23:18:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 23:18:18] 
[2025-10-08 23:18:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 23:18:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 23:18:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 23:18:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 23:18:18] 
[2025-10-08 23:18:18] 2025-10-09 03:17:37,793 | INFO     | ***************************************
[2025-10-08 23:18:18] 2025-10-09 03:17:38,297 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-08 23:18:18] 2025-10-09 03:17:38,381 | INFO     | sufficient remaining disk space (73029124096 B)
[2025-10-08 23:18:18] 2025-10-09 03:17:38,381 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 23:18:18] 2025-10-09 03:17:38,381 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 23:18:18] 2025-10-09 03:17:38,381 | INFO     | update_server=False
[2025-10-08 23:18:18] 2025-10-09 03:17:38,381 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 23:18:18] 2025-10-09 03:17:38,521 | INFO     | all data control threads have been joined
[2025-10-08 23:18:18] 2025-10-09 03:17:38,824 | INFO     | all job control threads have been joined
[2025-10-08 23:18:18] 2025-10-09 03:17:38,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 23:18:18] 2025-10-09 03:17:39,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 23:18:18] 2025-10-09 03:17:39,045 | INFO     | aborting loop
[2025-10-08 23:18:18] 2025-10-09 03:17:39,387 | INFO     | [job] retrieve thread has finished
[2025-10-08 23:18:18] 2025-10-09 03:17:39,529 | INFO     | [data] control thread has finished
[2025-10-08 23:18:18] 2025-10-09 03:17:39,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 23:18:18] 2025-10-09 03:17:39,586 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 23:18:18] 2025-10-09 03:17:39,656 | INFO     | all payload control threads have been joined
[2025-10-08 23:18:18] 2025-10-09 03:17:39,808 | INFO     | [payload] failed_post thread has finished
[2025-10-08 23:18:18] 2025-10-09 03:17:39,831 | INFO     | [job] control thread has finished
[2025-10-08 23:18:18] 2025-10-09 03:17:39,838 | INFO     | [job] queue monitor thread has finished
[2025-10-08 23:18:18] 2025-10-09 03:17:40,000 | INFO     | [payload] validate_post thread has finished
[2025-10-08 23:18:18] 2025-10-09 03:17:40,036 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 23:18:18] 2025-10-09 03:17:40,051 | INFO     | [job] job monitor thread has finished
[2025-10-08 23:18:18] 2025-10-09 03:17:40,258 | INFO     | [data] copytool_in thread has finished
[2025-10-08 23:18:18] 2025-10-09 03:17:40,425 | INFO     | [job] validate thread has finished
[2025-10-08 23:18:18] 2025-10-09 03:17:40,662 | INFO     | [payload] control thread has finished
[2025-10-08 23:18:18] 2025-10-09 03:17:40,776 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 23:18:18] 2025-10-09 03:17:40,777 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 23:18:18] 2025-10-09 03:17:40,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 23:18:18] 2025-10-09 03:17:41,545 | INFO     | [data] copytool_out thread has finished
[2025-10-08 23:18:18] 2025-10-09 03:17:44,796 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 23:18:18] 2025-10-09 03:18:07,220 | INFO     | PID=3062280 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 23:18:18] 2025-10-09 03:18:07,220 | INFO     | .. there are 61 such processes running
[2025-10-08 23:18:18] 2025-10-09 03:18:07,221 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 23:18:18] 2025-10-09 03:18:07,221 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 23:18:18] 2025-10-09 03:18:07,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 23:18:18] 2025-10-09 03:18:09,473 | INFO     | [monitor] cgroup control has ended
[2025-10-08 23:18:18] 2025-10-09 03:18:11,451 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140145352951616)>', '<ExcThread(monitor, started 140144631863040)>']
[2025-10-08 23:18:18] 2025-10-09 03:18:12,274 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 23:18:18] 2025-10-09 03:18:12,275 | INFO     | [monitor] control thread has ended
[2025-10-08 23:18:18] 2025-10-09 03:18:16,476 | INFO     | all workflow threads have been joined
[2025-10-08 23:18:18] 2025-10-09 03:18:16,477 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 23:18:18] 2025-10-09 03:18:16,477 | INFO     | traces error code: 0
[2025-10-08 23:18:18] 2025-10-09 03:18:16,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 23:18:18] 2025-10-09 03:18:16,914 [wrapper] ==== pilot stdout END ====
[2025-10-08 23:18:18] 2025-10-09 03:18:16,942 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 23:18:18] 2025-10-09 03:18:16,976 [wrapper] pilotpid: 3062280
[2025-10-08 23:18:18] 2025-10-09 03:18:17,064 [wrapper] Pilot exit status: 0
[2025-10-08 23:18:18] 2025-10-09 03:18:17,122 [wrapper] pandaids: 6836603487
[2025-10-08 23:18:18] 2025-10-09 03:18:17,248 [wrapper] cleanup supervisor_pilot 3608356 3062281
[2025-10-08 23:18:18] 2025-10-09 03:18:17,292 [wrapper] Test setup, not cleaning
[2025-10-08 23:18:18] 2025-10-09 03:18:17,366 [wrapper] apfmon messages muted
[2025-10-08 23:18:18] 2025-10-09 03:18:17,369 [wrapper] ==== wrapper stdout END ====
[2025-10-08 23:18:18] 2025-10-09 03:18:17,371 [wrapper] ==== wrapper stderr END ====
[2025-10-08 23:18:18]  *** Error codes and diagnostics ***
[2025-10-08 23:18:18]     "exeErrorCode": 0,
[2025-10-08 23:18:18]     "exeErrorDiag": "",
[2025-10-08 23:18:18]     "pilotErrorCode": 0,
[2025-10-08 23:18:18]     "pilotErrorDiag": "",
[2025-10-08 23:18:18]  *** Listing of results directory ***
[2025-10-08 23:18:18] total 409120
[2025-10-08 23:18:18] -rw-r--r--. 1 boincer umatlas    557409 Oct  8 18:57 pilot3.tar.gz
[2025-10-08 23:18:18] -rwx------. 1 boincer umatlas     36292 Oct  8 19:05 runpilot2-wrapper.sh
[2025-10-08 23:18:18] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 19:08 queuedata.json
[2025-10-08 23:18:18] -rw-r--r--. 1 boincer umatlas       100 Oct  8 21:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 23:18:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 21:59 run_atlas
[2025-10-08 23:18:18] -rw-r--r--. 1 boincer umatlas       105 Oct  8 21:59 job.xml
[2025-10-08 23:18:18] -rw-r--r--. 2 boincer umatlas 221771523 Oct  8 21:59 EVNT.46676267._000393.pool.root.1
[2025-10-08 23:18:18] -rw-r--r--. 2 boincer umatlas    569681 Oct  8 21:59 input.tar.gz
[2025-10-08 23:18:18] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 21:59 start_atlas.sh
[2025-10-08 23:18:18] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 21:59 shared
[2025-10-08 23:18:18] -rw-r--r--. 1 boincer umatlas         0 Oct  8 21:59 boinc_lockfile
[2025-10-08 23:18:18] -rw-r--r--. 1 boincer umatlas      2547 Oct  8 21:59 pandaJob.out
[2025-10-08 23:18:18] -rw-------. 1 boincer umatlas    979290 Oct  8 21:59 agis_schedconf.cvmfs.json
[2025-10-08 23:18:18] -rw-------. 1 boincer umatlas   1560401 Oct  8 22:00 agis_ddmendpoints.agis.ALL.json
[2025-10-08 23:18:18] drwx------. 5 boincer umatlas      4096 Oct  8 22:00 pilot3
[2025-10-08 23:18:18] -rw-r--r--. 1 boincer umatlas      7160 Oct  8 23:09 init_data.xml
[2025-10-08 23:18:18] -rw-------. 1 boincer umatlas 191310245 Oct  8 23:15 HITS.46676269._009725.pool.root.1
[2025-10-08 23:18:18] -rw-r--r--. 1 boincer umatlas       529 Oct  8 23:16 boinc_task_state.xml
[2025-10-08 23:18:18] -rw-------. 1 boincer umatlas      1032 Oct  8 23:16 memory_monitor_summary.json
[2025-10-08 23:18:18] -rw-------. 1 boincer umatlas    345258 Oct  8 23:16 log.46676269._009725.job.log.tgz.1
[2025-10-08 23:18:18] -rw-------. 1 boincer umatlas      7772 Oct  8 23:17 heartbeat.json
[2025-10-08 23:18:18] -rw-------. 1 boincer umatlas        95 Oct  8 23:18 pilot_heartbeat.json
[2025-10-08 23:18:18] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 23:18 boinc_mmap_file
[2025-10-08 23:18:18] -rw-r--r--. 1 boincer umatlas        27 Oct  8 23:18 wrapper_checkpoint.txt
[2025-10-08 23:18:18] -rw-------. 1 boincer umatlas      4824 Oct  8 23:18 pilotlog.txt
[2025-10-08 23:18:18] -rw-------. 1 boincer umatlas    627922 Oct  8 23:18 log.46676269._009725.job.log.1
[2025-10-08 23:18:18] -rw-------. 1 boincer umatlas       357 Oct  8 23:18 output.list
[2025-10-08 23:18:18] -rw-r--r--. 1 boincer umatlas       620 Oct  8 23:18 runtime_log
[2025-10-08 23:18:18] -rw-------. 1 boincer umatlas    993280 Oct  8 23:18 result.tar.gz
[2025-10-08 23:18:18] -rw-r--r--. 1 boincer umatlas      8700 Oct  8 23:18 runtime_log.err
[2025-10-08 23:18:18] -rw-------. 1 boincer umatlas       656 Oct  8 23:18 9MlLDmVPsQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmodYNDmynOvhn.diag
[2025-10-08 23:18:18] -rw-r--r--. 1 boincer umatlas     22331 Oct  8 23:18 stderr.txt
[2025-10-08 23:18:18] HITS file was successfully produced:
[2025-10-08 23:18:18] -rw-------. 1 boincer umatlas 191310245 Oct  8 23:15 shared/HITS.pool.root.1
[2025-10-08 23:18:18]  *** Contents of shared directory: ***
[2025-10-08 23:18:18] total 404960
[2025-10-08 23:18:18] -rw-r--r--. 2 boincer umatlas 221771523 Oct  8 21:59 ATLAS.root_0
[2025-10-08 23:18:18] -rw-r--r--. 2 boincer umatlas    569681 Oct  8 21:59 input.tar.gz
[2025-10-08 23:18:18] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 21:59 start_atlas.sh
[2025-10-08 23:18:18] -rw-------. 1 boincer umatlas 191310245 Oct  8 23:15 HITS.pool.root.1
[2025-10-08 23:18:18] -rw-------. 1 boincer umatlas    993280 Oct  8 23:18 result.tar.gz
23:18:19 (3057043): run_atlas exited; CPU time 22965.557929
23:18:19 (3057043): called boinc_finish(0)

</stderr_txt>
]]>

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