Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:00:16 (69725): wrapper (7.7.26015): starting
22:00:16 (69725): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 22:00:16] Arguments: --nthreads 8
[2025-10-08 22:00:16] Threads: 8
[2025-10-08 22:00:16] Checking for CVMFS
[2025-10-08 22:00:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 22:00:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 22:00:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 22:00:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 22:00:19] 2.13.2.0 1904412 124312 645676 151491 0 660 24827648 32503808 25716 16776704 0 433818344 99.658 391808538 17943 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-08 22:00:19] CVMFS is ok
[2025-10-08 22:00:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 22:00:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 22:00:19] Further information can be found at the LHC@home message board.
[2025-10-08 22:00:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 22:00:19] Checking for apptainer binary...
[2025-10-08 22:00:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 22:00:19] Running /usr/bin/apptainer --version
[2025-10-08 22:00:19] apptainer version 1.4.3-1.el9
[2025-10-08 22:00:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 22:00:20] c7-7-36.aglt2.org
[2025-10-08 22:00:20] apptainer works
[2025-10-08 22:00:20] Set ATHENA_PROC_NUMBER=8
[2025-10-08 22:00:20] Set ATHENA_CORE_NUMBER=8
[2025-10-08 22:00:20] Starting ATLAS job with PandaID=6836605799
[2025-10-08 22:00:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 23:42:00]  *** The last 200 lines of the pilot log: ***
[2025-10-08 23:42:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/c0/log.46676269._010883.job.log.tgz.1
[2025-10-08 23:42:00]  workdir=None
[2025-10-08 23:42:00] ]
[2025-10-08 23:42:00] 2025-10-09 03:41:17,324 | INFO     | transferring file log.46676269._010883.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6836605799/log.46676269._010883.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-08 23:42:00] 2025-10-09 03:41:17,325 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6836605799/log.46676269._010883.job.log.tgz.1 /tmp/boinchome/slots/4/log.46676269._010883.job
[2025-10-08 23:42:00] 2025-10-09 03:41:17,343 | INFO     | adding to output.list: log.46676269._010883.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/c0/log.46676269._010883.job.log.tg
[2025-10-08 23:42:00] 2025-10-09 03:41:17,344 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-08 23:42:00] 2025-10-09 03:41:17,344 | INFO     | summary of transferred files:
[2025-10-08 23:42:00] 2025-10-09 03:41:17,344 | INFO     |  -- lfn=log.46676269._010883.job.log.tgz.1, status_code=0, status=transferred
[2025-10-08 23:42:00] 2025-10-09 03:41:17,344 | INFO     | stage-out finished correctly
[2025-10-08 23:42:00] 2025-10-09 03:41:17,801 | INFO     | time since job start (5982s) is within the limit (172800.0s)
[2025-10-08 23:42:00] 2025-10-09 03:41:19,210 | INFO     | monitor loop #389: job 0:6836605799 is in state 'finished'
[2025-10-08 23:42:00] 2025-10-09 03:41:19,210 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:42:00] 2025-10-09 03:41:19,808 | INFO     | time since job start (5984s) is within the limit (172800.0s)
[2025-10-08 23:42:00] 2025-10-09 03:41:20,799 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-08 23:42:00] 2025-10-09 03:41:21,712 | INFO     | monitor loop #390: job 0:6836605799 is in state 'finished'
[2025-10-08 23:42:00] 2025-10-09 03:41:21,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:42:00] 2025-10-09 03:41:21,815 | INFO     | time since job start (5986s) is within the limit (172800.0s)
[2025-10-08 23:42:00] 2025-10-09 03:41:22,821 | INFO     | job 6836605799 has state=finished
[2025-10-08 23:42:00] 2025-10-09 03:41:22,821 | INFO     | preparing for final server update for job 6836605799 in state='finished'
[2025-10-08 23:42:00] 2025-10-09 03:41:22,822 | INFO     | this job has now completed (state=finished)
[2025-10-08 23:42:00] 2025-10-09 03:41:22,822 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-08 23:42:00] 2025-10-09 03:41:22,823 | INFO     | log transfer has been attempted: DONE
[2025-10-08 23:42:00] 2025-10-09 03:41:22,823 | INFO     | job 6836605799 has finished - writing final server update
[2025-10-08 23:42:00] 2025-10-09 03:41:22,823 | INFO     | total number of processed events: 400 (read)
[2025-10-08 23:42:00] 2025-10-09 03:41:22,824 | INFO     | executing command: lscpu
[2025-10-08 23:42:00] 2025-10-09 03:41:22,902 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 23:42:00] 2025-10-09 03:41:23,822 | INFO     | time since job start (5988s) is within the limit (172800.0s)
[2025-10-08 23:42:00] 2025-10-09 03:41:24,216 | INFO     | monitor loop #391: job 0:6836605799 is in state 'finished'
[2025-10-08 23:42:00] 2025-10-09 03:41:24,216 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:42:00] 2025-10-09 03:41:25,397 | INFO     | PID=76612 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-08 23:42:00] 2025-10-09 03:41:25,398 | INFO     | .. there are 27 such processes running
[2025-10-08 23:42:00] 2025-10-09 03:41:26,399 | INFO     | time since job start (5991s) is within the limit (172800.0s)
[2025-10-08 23:42:00] 2025-10-09 03:41:26,720 | INFO     | monitor loop #392: job 0:6836605799 is in state 'finished'
[2025-10-08 23:42:00] 2025-10-09 03:41:26,720 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:42:00] 2025-10-09 03:41:28,241 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-08 23:42:00] 2025-10-09 03:41:28,261 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3048.544593750001
[2025-10-08 23:42:00] 2025-10-09 03:41:28,278 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6836605799/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 23:42:00] 2025-10-09 03:41:28,279 | INFO     | extracted standard info from prmon json
[2025-10-08 23:42:00] 2025-10-09 03:41:28,279 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 23:42:00] 2025-10-09 03:41:28,279 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 23:42:00] 2025-10-09 03:41:28,280 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 23:42:00] 2025-10-09 03:41:28,280 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 23:42:00] 2025-10-09 03:41:28,282 | INFO     | fitting pss+swap vs Time
[2025-10-08 23:42:00] 2025-10-09 03:41:28,282 | INFO     | sum of square deviations: 218574468.98876375
[2025-10-08 23:42:00] 2025-10-09 03:41:28,283 | INFO     | sum of deviations: -3849109107.5168543
[2025-10-08 23:42:00] 2025-10-09 03:41:28,283 | INFO     | mean x: 1759978458.011236
[2025-10-08 23:42:00] 2025-10-09 03:41:28,283 | INFO     | mean y: 2337336.5168539328
[2025-10-08 23:42:00] 2025-10-09 03:41:28,283 | INFO     | -- intersect: 30995660312.91977
[2025-10-08 23:42:00] 2025-10-09 03:41:28,283 | INFO     | intersect: 30995660312.91977
[2025-10-08 23:42:00] 2025-10-09 03:41:28,283 | INFO     | chi2: 0.11525865255455019
[2025-10-08 23:42:00] 2025-10-09 03:41:28,283 | INFO     | -- intersect: 30995660312.91977
[2025-10-08 23:42:00] 2025-10-09 03:41:28,284 | INFO     | current memory leak: -17.61 B/s (using 89 data points, chi2=0.12)
[2025-10-08 23:42:00] 2025-10-09 03:41:28,284 | INFO     | could have reported an average CPU frequency of 3022 MHz (7 samples)
[2025-10-08 23:42:00] 2025-10-09 03:41:28,284 | INFO     | ..............................
[2025-10-08 23:42:00] 2025-10-09 03:41:28,284 | INFO     | . Timing measurements:
[2025-10-08 23:42:00] 2025-10-09 03:41:28,284 | INFO     | . get job = 0 s
[2025-10-08 23:42:00] 2025-10-09 03:41:28,284 | INFO     | . initial setup = 7 s
[2025-10-08 23:42:00] 2025-10-09 03:41:28,284 | INFO     | . payload setup = 57 s
[2025-10-08 23:42:00] 2025-10-09 03:41:28,285 | INFO     | . stage-in = 0 s
[2025-10-08 23:42:00] 2025-10-09 03:41:28,285 | INFO     | . payload execution = 5838 s
[2025-10-08 23:42:00] 2025-10-09 03:41:28,285 | INFO     | . stage-out = 0 s
[2025-10-08 23:42:00] 2025-10-09 03:41:28,285 | INFO     | . log creation = 0 s
[2025-10-08 23:42:00] 2025-10-09 03:41:28,285 | INFO     | ..............................
[2025-10-08 23:42:00] 2025-10-09 03:41:28,373 | INFO     | 
[2025-10-08 23:42:00] 2025-10-09 03:41:28,373 | INFO     | job summary report
[2025-10-08 23:42:00] 2025-10-09 03:41:28,373 | INFO     | --------------------------------------------------
[2025-10-08 23:42:00] 2025-10-09 03:41:28,373 | INFO     | PanDA job id: 6836605799
[2025-10-08 23:42:00] 2025-10-09 03:41:28,373 | INFO     | task id: 46676269
[2025-10-08 23:42:00] 2025-10-09 03:41:28,373 | INFO     | errors: (none)
[2025-10-08 23:42:00] 2025-10-09 03:41:28,374 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 23:42:00] 2025-10-09 03:41:28,374 | INFO     | pilot state: finished 
[2025-10-08 23:42:00] 2025-10-09 03:41:28,374 | INFO     | transexitcode: 0
[2025-10-08 23:42:00] 2025-10-09 03:41:28,374 | INFO     | exeerrorcode: 0
[2025-10-08 23:42:00] 2025-10-09 03:41:28,374 | INFO     | exeerrordiag: 
[2025-10-08 23:42:00] 2025-10-09 03:41:28,374 | INFO     | exitcode: 0
[2025-10-08 23:42:00] 2025-10-09 03:41:28,374 | INFO     | exitmsg: OK
[2025-10-08 23:42:00] 2025-10-09 03:41:28,374 | INFO     | cpuconsumptiontime: 35556 s
[2025-10-08 23:42:00] 2025-10-09 03:41:28,374 | INFO     | nevents: 400
[2025-10-08 23:42:00] 2025-10-09 03:41:28,374 | INFO     | neventsw: 0
[2025-10-08 23:42:00] 2025-10-09 03:41:28,374 | INFO     | pid: 86579
[2025-10-08 23:42:00] 2025-10-09 03:41:28,374 | INFO     | pgrp: 86579
[2025-10-08 23:42:00] 2025-10-09 03:41:28,374 | INFO     | corecount: 8
[2025-10-08 23:42:00] 2025-10-09 03:41:28,375 | INFO     | event service: False
[2025-10-08 23:42:00] 2025-10-09 03:41:28,375 | INFO     | sizes: {0: 2348684, 1: 2348883, 2: 2348911, 13: 2348911, 24: 2348967, 35: 2348995, 41: 2349413, 45: 2349441, 5899: 2376006, 5900: 2385059, 5904: 2385059, 5911: 238
[2025-10-08 23:42:00] 2025-10-09 03:41:28,375 | INFO     | --------------------------------------------------
[2025-10-08 23:42:00] 2025-10-09 03:41:28,375 | INFO     | 
[2025-10-08 23:42:00] 2025-10-09 03:41:28,375 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-08 23:42:00] 2025-10-09 03:41:28,399 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,400 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,400 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,400 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,400 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,400 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,401 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,401 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,401 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,401 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,401 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,401 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,401 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,401 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,401 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,401 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 23:42:00] 2025-10-09 03:41:28,401 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,402 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 23:42:00] 2025-10-09 03:41:28,402 | INFO     | job 6836605799 has completed (purged errors)
[2025-10-08 23:42:00] 2025-10-09 03:41:28,402 | INFO     | overall cleanup function is called
[2025-10-08 23:42:00] 2025-10-09 03:41:29,414 | INFO     | --- collectZombieJob: --- 10, [86579]
[2025-10-08 23:42:00] 2025-10-09 03:41:29,415 | INFO     | zombie collector waiting for pid 86579
[2025-10-08 23:42:00] 2025-10-09 03:41:29,415 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 23:42:00] 2025-10-09 03:41:29,415 | INFO     | collected zombie processes
[2025-10-08 23:42:00] 2025-10-09 03:41:29,415 | INFO     | will attempt to kill all subprocesses of pid=86579
[2025-10-08 23:42:00] 2025-10-09 03:41:30,053 | INFO     | process IDs to be killed: [86579] (in reverse order)
[2025-10-08 23:42:00] 2025-10-09 03:41:30,231 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 23:42:00] 2025-10-09 03:41:30,231 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 23:42:00] 2025-10-09 03:41:30,251 | INFO     | did not find any defunct processes belonging to 86579
[2025-10-08 23:42:00] 2025-10-09 03:41:30,271 | INFO     | did not find any defunct processes belonging to 86579
[2025-10-08 23:42:00] 2025-10-09 03:41:30,271 | INFO     | ready for new job
[2025-10-08 23:42:00] 2025-10-09 03:41:30,272 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 23:42:00] 2025-10-09 03:41:30,274 | INFO     | ***************************************
[2025-10-08 23:42:00] 2025-10-09 03:41:30,275 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 23:42:00] 2025-10-09 03:41:30,275 | INFO     | ***************************************
[2025-10-08 23:42:00] 2025-10-09 03:41:30,275 | INFO     | 
[2025-10-08 23:42:00] 2025-10-09 03:41:30,306 | INFO     | architecture information:
[2025-10-08 23:42:00] 2025-10-09 03:41:30,307 | INFO     | executing command: cat /etc/os-release
[2025-10-08 23:42:00] 2025-10-09 03:41:30,328 | INFO     | cat /etc/os-release:
[2025-10-08 23:42:00] NAME="CentOS Linux"
[2025-10-08 23:42:00] VERSION="7 (Core)"
[2025-10-08 23:42:00] ID="centos"
[2025-10-08 23:42:00] ID_LIKE="rhel fedora"
[2025-10-08 23:42:00] VERSION_ID="7"
[2025-10-08 23:42:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 23:42:00] ANSI_COLOR="0;31"
[2025-10-08 23:42:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 23:42:00] HOME_URL="https://www.centos.org/"
[2025-10-08 23:42:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 23:42:00] 
[2025-10-08 23:42:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 23:42:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 23:42:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 23:42:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 23:42:00] 
[2025-10-08 23:42:00] 2025-10-09 03:41:30,329 | INFO     | ***************************************
[2025-10-08 23:42:00] 2025-10-09 03:41:30,832 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-08 23:42:00] 2025-10-09 03:41:30,855 | INFO     | sufficient remaining disk space (95168757760 B)
[2025-10-08 23:42:00] 2025-10-09 03:41:30,855 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 23:42:00] 2025-10-09 03:41:30,856 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 23:42:00] 2025-10-09 03:41:30,856 | INFO     | update_server=False
[2025-10-08 23:42:00] 2025-10-09 03:41:30,856 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 23:42:00] 2025-10-09 03:41:30,856 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 23:42:00] 2025-10-09 03:41:30,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 23:42:00] 2025-10-09 03:41:30,857 | INFO     | aborting loop
[2025-10-08 23:42:00] 2025-10-09 03:41:31,426 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 23:42:00] 2025-10-09 03:41:31,484 | INFO     | all job control threads have been joined
[2025-10-08 23:42:00] 2025-10-09 03:41:31,861 | INFO     | [job] retrieve thread has finished
[2025-10-08 23:42:00] 2025-10-09 03:41:31,862 | INFO     | [job] job monitor thread has finished
[2025-10-08 23:42:00] 2025-10-09 03:41:31,874 | INFO     | all data control threads have been joined
[2025-10-08 23:42:00] 2025-10-09 03:41:31,979 | INFO     | all payload control threads have been joined
[2025-10-08 23:42:00] 2025-10-09 03:41:32,052 | INFO     | [payload] validate_post thread has finished
[2025-10-08 23:42:00] 2025-10-09 03:41:32,225 | INFO     | [payload] failed_post thread has finished
[2025-10-08 23:42:00] 2025-10-09 03:41:32,470 | INFO     | [data] copytool_in thread has finished
[2025-10-08 23:42:00] 2025-10-09 03:41:32,489 | INFO     | [job] control thread has finished
[2025-10-08 23:42:00] 2025-10-09 03:41:32,537 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 23:42:00] 2025-10-09 03:41:32,560 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 23:42:00] 2025-10-09 03:41:32,627 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 23:42:00] 2025-10-09 03:41:32,864 | INFO     | [data] copytool_out thread has finished
[2025-10-08 23:42:00] 2025-10-09 03:41:32,880 | INFO     | [data] control thread has finished
[2025-10-08 23:42:00] 2025-10-09 03:41:32,984 | INFO     | [payload] control thread has finished
[2025-10-08 23:42:00] 2025-10-09 03:41:33,144 | INFO     | [job] validate thread has finished
[2025-10-08 23:42:00] 2025-10-09 03:41:33,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 23:42:00] 2025-10-09 03:41:34,390 | INFO     | [job] queue monitor thread has finished
[2025-10-08 23:42:00] 2025-10-09 03:41:35,437 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 23:42:00] 2025-10-09 03:41:41,653 | INFO     | job.realtimelogging is not enabled
[2025-10-08 23:42:00] 2025-10-09 03:41:42,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 23:42:00] 2025-10-09 03:41:45,382 | INFO     | [monitor] cgroup control has ended
[2025-10-08 23:42:00] 2025-10-09 03:41:47,487 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140086703093568)>', '<ExcThread(monitor, started 140085987108608)>']
[2025-10-08 23:42:00] 2025-10-09 03:41:52,513 | INFO     | all workflow threads have been joined
[2025-10-08 23:42:00] 2025-10-09 03:41:52,514 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 23:42:00] 2025-10-09 03:41:52,514 | INFO     | traces error code: 0
[2025-10-08 23:42:00] 2025-10-09 03:41:52,514 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 23:42:00] 2025-10-09 03:42:00,110 | INFO     | PID=76612 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-08 23:42:00] 2025-10-09 03:42:00,114 | INFO     | .. there are 27 such processes running
[2025-10-08 23:42:00] 2025-10-09 03:42:00,114 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 23:42:00] 2025-10-09 03:42:00,115 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 23:42:00] 2025-10-09 03:42:00,115 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 23:42:00] 2025-10-09 03:42:00,115 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 23:42:00] 2025-10-09 03:42:00,115 | INFO     | [monitor] control thread has ended
[2025-10-08 23:42:00] 2025-10-09 03:42:00,306 [wrapper] ==== pilot stdout END ====
[2025-10-08 23:42:00] 2025-10-09 03:42:00,309 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 23:42:00] 2025-10-09 03:42:00,314 [wrapper] pilotpid: 76612
[2025-10-08 23:42:00] 2025-10-09 03:42:00,318 [wrapper] Pilot exit status: 0
[2025-10-08 23:42:00] 2025-10-09 03:42:00,336 [wrapper] pandaids: 6836605799
[2025-10-08 23:42:00] 2025-10-09 03:42:00,451 [wrapper] cleanup supervisor_pilot  330316 76613
[2025-10-08 23:42:00] 2025-10-09 03:42:00,454 [wrapper] Test setup, not cleaning
[2025-10-08 23:42:00] 2025-10-09 03:42:00,458 [wrapper] apfmon messages muted
[2025-10-08 23:42:00] 2025-10-09 03:42:00,461 [wrapper] ==== wrapper stdout END ====
[2025-10-08 23:42:00] 2025-10-09 03:42:00,467 [wrapper] ==== wrapper stderr END ====
[2025-10-08 23:42:00]  *** Error codes and diagnostics ***
[2025-10-08 23:42:00]     "exeErrorCode": 0,
[2025-10-08 23:42:00]     "exeErrorDiag": "",
[2025-10-08 23:42:00]     "pilotErrorCode": 0,
[2025-10-08 23:42:00]     "pilotErrorDiag": "",
[2025-10-08 23:42:00]  *** Listing of results directory ***
[2025-10-08 23:42:00] total 417544
[2025-10-08 23:42:00] -rw-r--r--. 1 boincer umatlas    557409 Oct  8 18:57 pilot3.tar.gz
[2025-10-08 23:42:00] -rwx------. 1 boincer umatlas     36292 Oct  8 19:21 runpilot2-wrapper.sh
[2025-10-08 23:42:00] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 19:21 queuedata.json
[2025-10-08 23:42:00] -rw-r--r--. 1 boincer umatlas       100 Oct  8 22:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 23:42:00] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 22:00 run_atlas
[2025-10-08 23:42:00] -rw-r--r--. 1 boincer umatlas       105 Oct  8 22:00 job.xml
[2025-10-08 23:42:00] -rw-r--r--. 2 boincer umatlas 218914202 Oct  8 22:00 EVNT.46676267._000442.pool.root.1
[2025-10-08 23:42:00] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 22:00 start_atlas.sh
[2025-10-08 23:42:00] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 22:00 shared
[2025-10-08 23:42:00] -rw-r--r--. 2 boincer umatlas    569677 Oct  8 22:00 input.tar.gz
[2025-10-08 23:42:00] -rw-r--r--. 1 boincer umatlas         0 Oct  8 22:00 boinc_lockfile
[2025-10-08 23:42:00] -rw-r--r--. 1 boincer umatlas      2549 Oct  8 22:00 pandaJob.out
[2025-10-08 23:42:00] -rw-------. 1 boincer umatlas    979290 Oct  8 22:01 agis_schedconf.cvmfs.json
[2025-10-08 23:42:00] -rw-------. 1 boincer umatlas   1560401 Oct  8 22:01 agis_ddmendpoints.agis.ALL.json
[2025-10-08 23:42:00] drwx------. 5 boincer umatlas      4096 Oct  8 22:01 pilot3
[2025-10-08 23:42:00] -rw-r--r--. 1 boincer umatlas      6936 Oct  8 23:36 init_data.xml
[2025-10-08 23:42:00] -rw-------. 1 boincer umatlas 202499949 Oct  8 23:40 HITS.46676269._010883.pool.root.1
[2025-10-08 23:42:00] -rw-r--r--. 1 boincer umatlas       529 Oct  8 23:40 boinc_task_state.xml
[2025-10-08 23:42:00] -rw-------. 1 boincer umatlas      1033 Oct  8 23:41 memory_monitor_summary.json
[2025-10-08 23:42:00] -rw-------. 1 boincer umatlas    342614 Oct  8 23:41 log.46676269._010883.job.log.tgz.1
[2025-10-08 23:42:00] -rw-------. 1 boincer umatlas        95 Oct  8 23:41 pilot_heartbeat.json
[2025-10-08 23:42:00] -rw-------. 1 boincer umatlas      7774 Oct  8 23:41 heartbeat.json
[2025-10-08 23:42:00] -rw-r--r--. 1 boincer umatlas        27 Oct  8 23:41 wrapper_checkpoint.txt
[2025-10-08 23:42:00] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 23:41 boinc_mmap_file
[2025-10-08 23:42:00] -rw-------. 1 boincer umatlas       821 Oct  8 23:42 pilotlog.txt
[2025-10-08 23:42:00] -rw-------. 1 boincer umatlas    780221 Oct  8 23:42 log.46676269._010883.job.log.1
[2025-10-08 23:42:00] -rw-------. 1 boincer umatlas       357 Oct  8 23:42 output.list
[2025-10-08 23:42:00] -rw-r--r--. 1 boincer umatlas       620 Oct  8 23:42 runtime_log
[2025-10-08 23:42:00] -rw-------. 1 boincer umatlas   1146880 Oct  8 23:42 result.tar.gz
[2025-10-08 23:42:00] -rw-------. 1 boincer umatlas       651 Oct  8 23:42 tMHKDmTesQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUpYNDmhI6SKn.diag
[2025-10-08 23:42:00] -rw-r--r--. 1 boincer umatlas      8698 Oct  8 23:42 runtime_log.err
[2025-10-08 23:42:00] -rw-r--r--. 1 boincer umatlas     22400 Oct  8 23:42 stderr.txt
[2025-10-08 23:42:00] HITS file was successfully produced:
[2025-10-08 23:42:00] -rw-------. 1 boincer umatlas 202499949 Oct  8 23:40 shared/HITS.pool.root.1
[2025-10-08 23:42:00]  *** Contents of shared directory: ***
[2025-10-08 23:42:00] total 413244
[2025-10-08 23:42:00] -rw-r--r--. 2 boincer umatlas 218914202 Oct  8 22:00 ATLAS.root_0
[2025-10-08 23:42:00] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 22:00 start_atlas.sh
[2025-10-08 23:42:00] -rw-r--r--. 2 boincer umatlas    569677 Oct  8 22:00 input.tar.gz
[2025-10-08 23:42:00] -rw-------. 1 boincer umatlas 202499949 Oct  8 23:40 HITS.pool.root.1
[2025-10-08 23:42:00] -rw-------. 1 boincer umatlas   1146880 Oct  8 23:42 result.tar.gz
23:42:02 (69725): run_atlas exited; CPU time 35720.940089
23:42:02 (69725): called boinc_finish(0)

</stderr_txt>
]]>

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