Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:47:05 (5776): wrapper (7.7.26015): starting
21:47:05 (5776): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 21:47:05] Arguments: --nthreads 8
[2025-10-08 21:47:05] Threads: 8
[2025-10-08 21:47:05] Checking for CVMFS
[2025-10-08 21:47:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 21:47:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 21:47:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 21:47:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 21:47:06] 2.11.2.0 3213 622857 247440 151491 0 57 15979958 20275201 1 130560 1 346823432 99.992 25893580 20094 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 21:47:06] CVMFS is ok
[2025-10-08 21:47:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 21:47:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 21:47:06] Further information can be found at the LHC@home message board.
[2025-10-08 21:47:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 21:47:06] Checking for apptainer binary...
[2025-10-08 21:47:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 21:47:06] Running /usr/bin/apptainer --version
[2025-10-08 21:47:06] apptainer version 1.3.2-1.el7
[2025-10-08 21:47:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 21:47:06] c-205-38.aglt2.org
[2025-10-08 21:47:06] apptainer works
[2025-10-08 21:47:06] Set ATHENA_PROC_NUMBER=8
[2025-10-08 21:47:06] Set ATHENA_CORE_NUMBER=8
[2025-10-08 21:47:06] Starting ATLAS job with PandaID=6836604919
[2025-10-08 21:47:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 22:41:31]  *** The last 200 lines of the pilot log: ***
[2025-10-08 22:41:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6836604919/log.46676269._010507.job.log.tgz.1
[2025-10-08 22:41:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/28/log.46676269._010507.job.log.tgz.1
[2025-10-08 22:41:31]  workdir=None
[2025-10-08 22:41:31] ]
[2025-10-08 22:41:31] 2025-10-09 02:40:48,735 | INFO     | transferring file log.46676269._010507.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6836604919/log.46676269._010507.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-08 22:41:31] 2025-10-09 02:40:48,735 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6836604919/log.46676269._010507.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._010507.job
[2025-10-08 22:41:31] 2025-10-09 02:40:48,754 | INFO     | adding to output.list: log.46676269._010507.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/28/log.46676269._010507.job.log.tg
[2025-10-08 22:41:31] 2025-10-09 02:40:48,755 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-08 22:41:31] 2025-10-09 02:40:48,755 | INFO     | summary of transferred files:
[2025-10-08 22:41:31] 2025-10-09 02:40:48,755 | INFO     |  -- lfn=log.46676269._010507.job.log.tgz.1, status_code=0, status=transferred
[2025-10-08 22:41:31] 2025-10-09 02:40:48,755 | INFO     | stage-out finished correctly
[2025-10-08 22:41:31] 2025-10-09 02:40:48,886 | INFO     | monitor loop #248: job 0:6836604919 is in state 'finished'
[2025-10-08 22:41:31] 2025-10-09 02:40:48,886 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 22:41:31] 2025-10-09 02:40:50,207 | INFO     | time since job start (3212s) is within the limit (172800.0s)
[2025-10-08 22:41:31] 2025-10-09 02:40:51,311 | INFO     | PID=9447 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-08 22:41:31] 2025-10-09 02:40:51,366 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-08 22:41:31] 2025-10-09 02:40:51,395 | INFO     | monitor loop #249: job 0:6836604919 is in state 'finished'
[2025-10-08 22:41:31] 2025-10-09 02:40:51,400 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 22:41:31] 2025-10-09 02:40:52,312 | INFO     | time since job start (3214s) is within the limit (172800.0s)
[2025-10-08 22:41:31] 2025-10-09 02:40:53,228 | INFO     | job 6836604919 has state=finished
[2025-10-08 22:41:31] 2025-10-09 02:40:53,228 | INFO     | preparing for final server update for job 6836604919 in state='finished'
[2025-10-08 22:41:31] 2025-10-09 02:40:53,229 | INFO     | this job has now completed (state=finished)
[2025-10-08 22:41:31] 2025-10-09 02:40:53,229 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-08 22:41:31] 2025-10-09 02:40:53,229 | INFO     | log transfer has been attempted: DONE
[2025-10-08 22:41:31] 2025-10-09 02:40:53,229 | INFO     | job 6836604919 has finished - writing final server update
[2025-10-08 22:41:31] 2025-10-09 02:40:53,230 | INFO     | total number of processed events: 400 (read)
[2025-10-08 22:41:31] 2025-10-09 02:40:53,231 | INFO     | executing command: lscpu
[2025-10-08 22:41:31] 2025-10-09 02:40:53,262 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 22:41:31] 2025-10-09 02:40:53,914 | INFO     | monitor loop #250: job 0:6836604919 is in state 'finished'
[2025-10-08 22:41:31] 2025-10-09 02:40:53,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 22:41:31] 2025-10-09 02:40:54,318 | INFO     | time since job start (3216s) is within the limit (172800.0s)
[2025-10-08 22:41:31] 2025-10-09 02:40:56,322 | INFO     | time since job start (3218s) is within the limit (172800.0s)
[2025-10-08 22:41:31] 2025-10-09 02:40:56,417 | INFO     | monitor loop #251: job 0:6836604919 is in state 'finished'
[2025-10-08 22:41:31] 2025-10-09 02:40:56,417 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 22:41:31] 2025-10-09 02:40:58,328 | INFO     | time since job start (3220s) is within the limit (172800.0s)
[2025-10-08 22:41:31] 2025-10-09 02:40:58,920 | INFO     | monitor loop #252: job 0:6836604919 is in state 'finished'
[2025-10-08 22:41:31] 2025-10-09 02:40:58,921 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 22:41:31] 2025-10-09 02:40:58,976 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-08 22:41:31] 2025-10-09 02:40:58,979 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 1509.2280624999996
[2025-10-08 22:41:31] 2025-10-09 02:40:58,982 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6836604919/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 22:41:31] 2025-10-09 02:40:58,982 | INFO     | extracted standard info from prmon json
[2025-10-08 22:41:31] 2025-10-09 02:40:58,983 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 22:41:31] 2025-10-09 02:40:58,983 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 22:41:31] 2025-10-09 02:40:58,983 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 22:41:31] 2025-10-09 02:40:58,983 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 22:41:31] 2025-10-09 02:40:58,985 | INFO     | fitting pss+swap vs Time
[2025-10-08 22:41:31] 2025-10-09 02:40:58,985 | INFO     | sum of square deviations: 30168007.5
[2025-10-08 22:41:31] 2025-10-09 02:40:58,985 | INFO     | sum of deviations: -3869937234.0
[2025-10-08 22:41:31] 2025-10-09 02:40:58,985 | INFO     | mean x: 1759976140.5
[2025-10-08 22:41:31] 2025-10-09 02:40:58,985 | INFO     | mean y: 2619364.5217391304
[2025-10-08 22:41:31] 2025-10-09 02:40:58,985 | INFO     | -- intersect: 225771497109.35007
[2025-10-08 22:41:31] 2025-10-09 02:40:58,985 | INFO     | intersect: 225771497109.35007
[2025-10-08 22:41:31] 2025-10-09 02:40:58,986 | INFO     | chi2: 0.044278892670865655
[2025-10-08 22:41:31] 2025-10-09 02:40:58,986 | INFO     | -- intersect: 225771497109.35007
[2025-10-08 22:41:31] 2025-10-09 02:40:58,986 | INFO     | current memory leak: -128.28 B/s (using 46 data points, chi2=0.04)
[2025-10-08 22:41:31] 2025-10-09 02:40:58,986 | INFO     | could have reported an average CPU frequency of 1860 MHz (5 samples)
[2025-10-08 22:41:31] 2025-10-09 02:40:58,986 | INFO     | ..............................
[2025-10-08 22:41:31] 2025-10-09 02:40:58,986 | INFO     | . Timing measurements:
[2025-10-08 22:41:31] 2025-10-09 02:40:58,986 | INFO     | . get job = 0 s
[2025-10-08 22:41:31] 2025-10-09 02:40:58,987 | INFO     | . initial setup = 2 s
[2025-10-08 22:41:31] 2025-10-09 02:40:58,987 | INFO     | . payload setup = 6 s
[2025-10-08 22:41:31] 2025-10-09 02:40:58,987 | INFO     | . stage-in = 0 s
[2025-10-08 22:41:31] 2025-10-09 02:40:58,987 | INFO     | . payload execution = 3183 s
[2025-10-08 22:41:31] 2025-10-09 02:40:58,987 | INFO     | . stage-out = 0 s
[2025-10-08 22:41:31] 2025-10-09 02:40:58,987 | INFO     | . log creation = 0 s
[2025-10-08 22:41:31] 2025-10-09 02:40:58,987 | INFO     | ..............................
[2025-10-08 22:41:31] 2025-10-09 02:40:59,051 | INFO     | 
[2025-10-08 22:41:31] 2025-10-09 02:40:59,051 | INFO     | job summary report
[2025-10-08 22:41:31] 2025-10-09 02:40:59,051 | INFO     | --------------------------------------------------
[2025-10-08 22:41:31] 2025-10-09 02:40:59,051 | INFO     | PanDA job id: 6836604919
[2025-10-08 22:41:31] 2025-10-09 02:40:59,052 | INFO     | task id: 46676269
[2025-10-08 22:41:31] 2025-10-09 02:40:59,052 | INFO     | errors: (none)
[2025-10-08 22:41:31] 2025-10-09 02:40:59,052 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 22:41:31] 2025-10-09 02:40:59,052 | INFO     | pilot state: finished 
[2025-10-08 22:41:31] 2025-10-09 02:40:59,052 | INFO     | transexitcode: 0
[2025-10-08 22:41:31] 2025-10-09 02:40:59,052 | INFO     | exeerrorcode: 0
[2025-10-08 22:41:31] 2025-10-09 02:40:59,052 | INFO     | exeerrordiag: 
[2025-10-08 22:41:31] 2025-10-09 02:40:59,052 | INFO     | exitcode: 0
[2025-10-08 22:41:31] 2025-10-09 02:40:59,053 | INFO     | exitmsg: OK
[2025-10-08 22:41:31] 2025-10-09 02:40:59,053 | INFO     | cpuconsumptiontime: 23704 s
[2025-10-08 22:41:31] 2025-10-09 02:40:59,053 | INFO     | nevents: 400
[2025-10-08 22:41:31] 2025-10-09 02:40:59,053 | INFO     | neventsw: 0
[2025-10-08 22:41:31] 2025-10-09 02:40:59,053 | INFO     | pid: 15797
[2025-10-08 22:41:31] 2025-10-09 02:40:59,053 | INFO     | pgrp: 15797
[2025-10-08 22:41:31] 2025-10-09 02:40:59,053 | INFO     | corecount: 8
[2025-10-08 22:41:31] 2025-10-09 02:40:59,053 | INFO     | event service: False
[2025-10-08 22:41:31] 2025-10-09 02:40:59,053 | INFO     | sizes: {0: 2348028, 1: 2348884, 5: 2349146, 12: 2349202, 3192: 2374739, 3194: 2383737, 3197: 2383921, 3205: 2384147}
[2025-10-08 22:41:31] 2025-10-09 02:40:59,054 | INFO     | --------------------------------------------------
[2025-10-08 22:41:31] 2025-10-09 02:40:59,054 | INFO     | 
[2025-10-08 22:41:31] 2025-10-09 02:40:59,054 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-08 22:41:31] 2025-10-09 02:40:59,076 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,077 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,077 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,077 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,078 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,078 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,078 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,078 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,078 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,078 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,078 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,078 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,079 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,079 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,079 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 22:41:31] 2025-10-09 02:40:59,079 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,079 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 22:41:31] 2025-10-09 02:40:59,079 | INFO     | job 6836604919 has completed (purged errors)
[2025-10-08 22:41:31] 2025-10-09 02:40:59,080 | INFO     | overall cleanup function is called
[2025-10-08 22:41:31] 2025-10-09 02:41:00,088 | INFO     | --- collectZombieJob: --- 10, [15797]
[2025-10-08 22:41:31] 2025-10-09 02:41:00,088 | INFO     | zombie collector waiting for pid 15797
[2025-10-08 22:41:31] 2025-10-09 02:41:00,088 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 22:41:31] 2025-10-09 02:41:00,088 | INFO     | collected zombie processes
[2025-10-08 22:41:31] 2025-10-09 02:41:00,088 | INFO     | will attempt to kill all subprocesses of pid=15797
[2025-10-08 22:41:31] 2025-10-09 02:41:00,186 | INFO     | process IDs to be killed: [15797] (in reverse order)
[2025-10-08 22:41:31] 2025-10-09 02:41:00,235 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 22:41:31] 2025-10-09 02:41:00,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 22:41:31] 2025-10-09 02:41:00,238 | INFO     | did not find any defunct processes belonging to 15797
[2025-10-08 22:41:31] 2025-10-09 02:41:00,241 | INFO     | did not find any defunct processes belonging to 15797
[2025-10-08 22:41:31] 2025-10-09 02:41:00,241 | INFO     | ready for new job
[2025-10-08 22:41:31] 2025-10-09 02:41:00,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 22:41:31] 2025-10-09 02:41:00,244 | INFO     | ***************************************
[2025-10-08 22:41:31] 2025-10-09 02:41:00,244 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 22:41:31] 2025-10-09 02:41:00,244 | INFO     | ***************************************
[2025-10-08 22:41:31] 2025-10-09 02:41:00,244 | INFO     | 
[2025-10-08 22:41:31] 2025-10-09 02:41:00,245 | INFO     | architecture information:
[2025-10-08 22:41:31] 2025-10-09 02:41:00,246 | INFO     | executing command: cat /etc/os-release
[2025-10-08 22:41:31] 2025-10-09 02:41:00,261 | INFO     | cat /etc/os-release:
[2025-10-08 22:41:31] NAME="CentOS Linux"
[2025-10-08 22:41:31] VERSION="7 (Core)"
[2025-10-08 22:41:31] ID="centos"
[2025-10-08 22:41:31] ID_LIKE="rhel fedora"
[2025-10-08 22:41:31] VERSION_ID="7"
[2025-10-08 22:41:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 22:41:31] ANSI_COLOR="0;31"
[2025-10-08 22:41:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 22:41:31] HOME_URL="https://www.centos.org/"
[2025-10-08 22:41:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 22:41:31] 
[2025-10-08 22:41:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 22:41:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 22:41:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 22:41:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 22:41:31] 
[2025-10-08 22:41:31] 2025-10-09 02:41:00,261 | INFO     | ***************************************
[2025-10-08 22:41:31] 2025-10-09 02:41:00,764 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-08 22:41:31] 2025-10-09 02:41:00,781 | INFO     | sufficient remaining disk space (33281802240 B)
[2025-10-08 22:41:31] 2025-10-09 02:41:00,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 22:41:31] 2025-10-09 02:41:00,781 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 22:41:31] 2025-10-09 02:41:00,781 | INFO     | update_server=False
[2025-10-08 22:41:31] 2025-10-09 02:41:00,782 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 22:41:31] 2025-10-09 02:41:00,782 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 22:41:31] 2025-10-09 02:41:00,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 22:41:31] 2025-10-09 02:41:00,782 | INFO     | aborting loop
[2025-10-08 22:41:31] 2025-10-09 02:41:00,944 | INFO     | all data control threads have been joined
[2025-10-08 22:41:31] 2025-10-09 02:41:01,115 | INFO     | all job control threads have been joined
[2025-10-08 22:41:31] 2025-10-09 02:41:01,787 | INFO     | [job] retrieve thread has finished
[2025-10-08 22:41:31] 2025-10-09 02:41:01,788 | INFO     | [job] queue monitor thread has finished
[2025-10-08 22:41:31] 2025-10-09 02:41:01,788 | INFO     | [job] job monitor thread has finished
[2025-10-08 22:41:31] 2025-10-09 02:41:01,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 22:41:31] 2025-10-09 02:41:01,950 | INFO     | [data] control thread has finished
[2025-10-08 22:41:31] 2025-10-09 02:41:01,959 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 22:41:31] 2025-10-09 02:41:02,120 | INFO     | [job] control thread has finished
[2025-10-08 22:41:31] 2025-10-09 02:41:02,285 | INFO     | all payload control threads have been joined
[2025-10-08 22:41:31] 2025-10-09 02:41:02,286 | INFO     | [payload] validate_post thread has finished
[2025-10-08 22:41:31] 2025-10-09 02:41:02,794 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 22:41:31] 2025-10-09 02:41:02,820 | INFO     | [job] validate thread has finished
[2025-10-08 22:41:31] 2025-10-09 02:41:02,947 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 22:41:31] 2025-10-09 02:41:02,988 | INFO     | [payload] failed_post thread has finished
[2025-10-08 22:41:31] 2025-10-09 02:41:03,046 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 22:41:31] 2025-10-09 02:41:03,176 | INFO     | [data] copytool_in thread has finished
[2025-10-08 22:41:31] 2025-10-09 02:41:03,255 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 22:41:31] 2025-10-09 02:41:03,290 | INFO     | [payload] control thread has finished
[2025-10-08 22:41:31] 2025-10-09 02:41:03,825 | INFO     | [data] copytool_out thread has finished
[2025-10-08 22:41:31] 2025-10-09 02:41:05,964 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 22:41:31] 2025-10-09 02:41:22,574 | INFO     | [monitor] cgroup control has ended
[2025-10-08 22:41:31] 2025-10-09 02:41:24,312 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140474344146752)>', '<ExcThread(monitor, started 140474052491008)>']
[2025-10-08 22:41:31] 2025-10-09 02:41:29,338 | INFO     | all workflow threads have been joined
[2025-10-08 22:41:31] 2025-10-09 02:41:29,338 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 22:41:31] 2025-10-09 02:41:29,338 | INFO     | traces error code: 0
[2025-10-08 22:41:31] 2025-10-09 02:41:29,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 22:41:31] 2025-10-09 02:41:31,515 | INFO     | PID=9447 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-08 22:41:31] 2025-10-09 02:41:31,515 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 22:41:31] 2025-10-09 02:41:31,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 22:41:31] 2025-10-09 02:41:31,516 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 22:41:31] 2025-10-09 02:41:31,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 22:41:31] 2025-10-09 02:41:31,516 | INFO     | [monitor] control thread has ended
[2025-10-08 22:41:31] 2025-10-09 02:41:31,614 [wrapper] ==== pilot stdout END ====
[2025-10-08 22:41:31] 2025-10-09 02:41:31,618 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 22:41:31] 2025-10-09 02:41:31,621 [wrapper] pilotpid: 9447
[2025-10-08 22:41:31] 2025-10-09 02:41:31,625 [wrapper] Pilot exit status: 0
[2025-10-08 22:41:31] 2025-10-09 02:41:31,638 [wrapper] pandaids: 6836604919
[2025-10-08 22:41:31] 2025-10-09 02:41:31,672 [wrapper] cleanup supervisor_pilot  1908 9448
[2025-10-08 22:41:31] 2025-10-09 02:41:31,676 [wrapper] Test setup, not cleaning
[2025-10-08 22:41:31] 2025-10-09 02:41:31,679 [wrapper] apfmon messages muted
[2025-10-08 22:41:31] 2025-10-09 02:41:31,682 [wrapper] ==== wrapper stdout END ====
[2025-10-08 22:41:31] 2025-10-09 02:41:31,685 [wrapper] ==== wrapper stderr END ====
[2025-10-08 22:41:31]  *** Error codes and diagnostics ***
[2025-10-08 22:41:31]     "exeErrorCode": 0,
[2025-10-08 22:41:31]     "exeErrorDiag": "",
[2025-10-08 22:41:31]     "pilotErrorCode": 0,
[2025-10-08 22:41:31]     "pilotErrorDiag": "",
[2025-10-08 22:41:31]  *** Listing of results directory ***
[2025-10-08 22:41:31] total 405528
[2025-10-08 22:41:31] -rw-r--r-- 1 boincer umatlas    557409 Oct  8 18:57 pilot3.tar.gz
[2025-10-08 22:41:31] -rw-r--r-- 1 boincer umatlas      5112 Oct  8 19:12 queuedata.json
[2025-10-08 22:41:31] -rwx------ 1 boincer umatlas     36292 Oct  8 19:12 runpilot2-wrapper.sh
[2025-10-08 22:41:31] -rw-r--r-- 1 boincer umatlas       100 Oct  8 21:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 22:41:31] -rwxr-xr-x 1 boincer umatlas      7986 Oct  8 21:47 run_atlas
[2025-10-08 22:41:31] -rw-r--r-- 1 boincer umatlas       105 Oct  8 21:47 job.xml
[2025-10-08 22:41:31] -rw-r--r-- 2 boincer umatlas 220355961 Oct  8 21:47 EVNT.46676267._000426.pool.root.1
[2025-10-08 22:41:31] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 21:47 start_atlas.sh
[2025-10-08 22:41:31] drwxrwx--x 2 boincer umatlas      4096 Oct  8 21:47 shared
[2025-10-08 22:41:31] -rw-r--r-- 2 boincer umatlas    569672 Oct  8 21:47 input.tar.gz
[2025-10-08 22:41:31] -rw-r--r-- 1 boincer umatlas         0 Oct  8 21:47 boinc_lockfile
[2025-10-08 22:41:31] -rw-r--r-- 1 boincer umatlas      2550 Oct  8 21:47 pandaJob.out
[2025-10-08 22:41:31] -rw------- 1 boincer umatlas    979290 Oct  8 21:47 agis_schedconf.cvmfs.json
[2025-10-08 22:41:31] -rw------- 1 boincer umatlas   1560401 Oct  8 21:47 agis_ddmendpoints.agis.ALL.json
[2025-10-08 22:41:31] drwx------ 5 boincer umatlas      4096 Oct  8 21:47 pilot3
[2025-10-08 22:41:31] -rw-r--r-- 1 boincer umatlas      6134 Oct  8 22:37 init_data.xml
[2025-10-08 22:41:31] -rw------- 1 boincer umatlas 189414924 Oct  8 22:40 HITS.46676269._010507.pool.root.1
[2025-10-08 22:41:31] -rw------- 1 boincer umatlas        95 Oct  8 22:40 pilot_heartbeat.json
[2025-10-08 22:41:31] -rw------- 1 boincer umatlas      1044 Oct  8 22:40 memory_monitor_summary.json
[2025-10-08 22:41:31] -rw-r--r-- 1 boincer umatlas       529 Oct  8 22:40 boinc_task_state.xml
[2025-10-08 22:41:31] -rw------- 1 boincer umatlas    308425 Oct  8 22:40 log.46676269._010507.job.log.tgz.1
[2025-10-08 22:41:31] -rw------- 1 boincer umatlas      7844 Oct  8 22:40 heartbeat.json
[2025-10-08 22:41:31] -rw-r--r-- 1 boincer umatlas      8192 Oct  8 22:41 boinc_mmap_file
[2025-10-08 22:41:31] -rw-r--r-- 1 boincer umatlas        27 Oct  8 22:41 wrapper_checkpoint.txt
[2025-10-08 22:41:31] -rw------- 1 boincer umatlas       744 Oct  8 22:41 pilotlog.txt
[2025-10-08 22:41:31] -rw------- 1 boincer umatlas    486816 Oct  8 22:41 log.46676269._010507.job.log.1
[2025-10-08 22:41:31] -rw------- 1 boincer umatlas       357 Oct  8 22:41 output.list
[2025-10-08 22:41:31] -rw-r--r-- 1 boincer umatlas       620 Oct  8 22:41 runtime_log
[2025-10-08 22:41:31] -rw------- 1 boincer umatlas    819200 Oct  8 22:41 result.tar.gz
[2025-10-08 22:41:31] -rw-r--r-- 1 boincer umatlas      8703 Oct  8 22:41 runtime_log.err
[2025-10-08 22:41:31] -rw------- 1 boincer umatlas       657 Oct  8 22:41 HFjMDmWVsQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDm96MMDmsNMEYo.diag
[2025-10-08 22:41:31] -rw-r--r-- 1 boincer umatlas     22396 Oct  8 22:41 stderr.txt
[2025-10-08 22:41:31] HITS file was successfully produced:
[2025-10-08 22:41:31] -rw------- 1 boincer umatlas 189414924 Oct  8 22:40 shared/HITS.pool.root.1
[2025-10-08 22:41:31]  *** Contents of shared directory: ***
[2025-10-08 22:41:31] total 401548
[2025-10-08 22:41:31] -rw-r--r-- 2 boincer umatlas 220355961 Oct  8 21:47 ATLAS.root_0
[2025-10-08 22:41:31] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 21:47 start_atlas.sh
[2025-10-08 22:41:31] -rw-r--r-- 2 boincer umatlas    569672 Oct  8 21:47 input.tar.gz
[2025-10-08 22:41:31] -rw------- 1 boincer umatlas 189414924 Oct  8 22:40 HITS.pool.root.1
[2025-10-08 22:41:31] -rw------- 1 boincer umatlas    819200 Oct  8 22:41 result.tar.gz
22:41:33 (5776): run_atlas exited; CPU time 23593.759888
22:41:33 (5776): called boinc_finish(0)

</stderr_txt>
]]>

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