Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:52:45 (3992290): wrapper (7.7.26015): starting
21:52:45 (3992290): wrapper: running run_atlas (--nthreads 9)
[2025-10-08 21:52:45] Arguments: --nthreads 9
[2025-10-08 21:52:45] Threads: 9
[2025-10-08 21:52:45] Checking for CVMFS
[2025-10-08 21:52:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 21:52:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 21:52:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 21:52:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 21:52:46] 2.13.2.0 4520 32355 263404 151491 0 272 20609814 39288833 7884 16776704 0 37717116 99.596 40620878 38732 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 21:52:46] CVMFS is ok
[2025-10-08 21:52:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 21:52:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 21:52:46] Further information can be found at the LHC@home message board.
[2025-10-08 21:52:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 21:52:46] Checking for apptainer binary...
[2025-10-08 21:52:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 21:52:46] Running /usr/bin/apptainer --version
[2025-10-08 21:52:46] apptainer version 1.4.3-1.el9
[2025-10-08 21:52:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 21:52:46] c-210-5.aglt2.org
[2025-10-08 21:52:46] apptainer works
[2025-10-08 21:52:46] Set ATHENA_PROC_NUMBER=9
[2025-10-08 21:52:46] Set ATHENA_CORE_NUMBER=9
[2025-10-08 21:52:46] Starting ATLAS job with PandaID=6836605318
[2025-10-08 21:52:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 23:30:33]  *** The last 200 lines of the pilot log: ***
[2025-10-08 23:30:33]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6836605318/log.46676269._010801.job.log.tgz.1
[2025-10-08 23:30:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/42/log.46676269._010801.job.log.tgz.1
[2025-10-08 23:30:33]  workdir=None
[2025-10-08 23:30:33] ]
[2025-10-08 23:30:33] 2025-10-09 03:29:51,094 | INFO     | transferring file log.46676269._010801.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6836605318/log.46676269._010801.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-08 23:30:33] 2025-10-09 03:29:51,094 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6836605318/log.46676269._010801.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._010801.job
[2025-10-08 23:30:33] 2025-10-09 03:29:51,115 | INFO     | adding to output.list: log.46676269._010801.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/42/log.46676269._010801.job.log.tg
[2025-10-08 23:30:33] 2025-10-09 03:29:51,116 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-08 23:30:33] 2025-10-09 03:29:51,116 | INFO     | summary of transferred files:
[2025-10-08 23:30:33] 2025-10-09 03:29:51,116 | INFO     |  -- lfn=log.46676269._010801.job.log.tgz.1, status_code=0, status=transferred
[2025-10-08 23:30:33] 2025-10-09 03:29:51,116 | INFO     | stage-out finished correctly
[2025-10-08 23:30:33] 2025-10-09 03:29:51,348 | INFO     | time since job start (5813s) is within the limit (172800.0s)
[2025-10-08 23:30:33] 2025-10-09 03:29:52,053 | INFO     | monitor loop #428: job 0:6836605318 is in state 'finished'
[2025-10-08 23:30:33] 2025-10-09 03:29:52,053 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:30:33] 2025-10-09 03:29:53,353 | INFO     | time since job start (5815s) is within the limit (172800.0s)
[2025-10-08 23:30:33] 2025-10-09 03:29:54,556 | INFO     | monitor loop #429: job 0:6836605318 is in state 'finished'
[2025-10-08 23:30:33] 2025-10-09 03:29:54,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:30:33] 2025-10-09 03:29:54,567 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-08 23:30:33] 2025-10-09 03:29:55,358 | INFO     | time since job start (5817s) is within the limit (172800.0s)
[2025-10-08 23:30:33] 2025-10-09 03:29:57,060 | INFO     | monitor loop #430: job 0:6836605318 is in state 'finished'
[2025-10-08 23:30:33] 2025-10-09 03:29:57,060 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:30:33] 2025-10-09 03:29:57,218 | INFO     | job 6836605318 has state=finished
[2025-10-08 23:30:33] 2025-10-09 03:29:57,218 | INFO     | preparing for final server update for job 6836605318 in state='finished'
[2025-10-08 23:30:33] 2025-10-09 03:29:57,219 | INFO     | this job has now completed (state=finished)
[2025-10-08 23:30:33] 2025-10-09 03:29:57,219 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-08 23:30:33] 2025-10-09 03:29:57,219 | INFO     | log transfer has been attempted: DONE
[2025-10-08 23:30:33] 2025-10-09 03:29:57,219 | INFO     | job 6836605318 has finished - writing final server update
[2025-10-08 23:30:33] 2025-10-09 03:29:57,219 | INFO     | total number of processed events: 400 (read)
[2025-10-08 23:30:33] 2025-10-09 03:29:57,220 | INFO     | executing command: lscpu
[2025-10-08 23:30:33] 2025-10-09 03:29:57,266 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 23:30:33] 2025-10-09 03:29:57,364 | INFO     | time since job start (5819s) is within the limit (172800.0s)
[2025-10-08 23:30:33] 2025-10-09 03:29:59,370 | INFO     | time since job start (5821s) is within the limit (172800.0s)
[2025-10-08 23:30:33] 2025-10-09 03:29:59,563 | INFO     | monitor loop #431: job 0:6836605318 is in state 'finished'
[2025-10-08 23:30:33] 2025-10-09 03:29:59,563 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 23:30:33] 2025-10-09 03:30:00,668 | INFO     | PID=3996311 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 23:30:33] 2025-10-09 03:30:00,668 | INFO     | .. there are 6 such processes running
[2025-10-08 23:30:33] 2025-10-09 03:30:01,227 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-08 23:30:33] 2025-10-09 03:30:01,233 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2620.1879999999996
[2025-10-08 23:30:33] 2025-10-09 03:30:01,240 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6836605318/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 23:30:33] 2025-10-09 03:30:01,241 | INFO     | extracted standard info from prmon json
[2025-10-08 23:30:33] 2025-10-09 03:30:01,241 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 23:30:33] 2025-10-09 03:30:01,241 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 23:30:33] 2025-10-09 03:30:01,242 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 23:30:33] 2025-10-09 03:30:01,242 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 23:30:33] 2025-10-09 03:30:01,245 | INFO     | fitting pss+swap vs Time
[2025-10-08 23:30:33] 2025-10-09 03:30:01,245 | INFO     | sum of square deviations: 211285822.0
[2025-10-08 23:30:33] 2025-10-09 03:30:01,246 | INFO     | sum of deviations: 21472823.50000012
[2025-10-08 23:30:33] 2025-10-09 03:30:01,246 | INFO     | mean x: 1759977763.5
[2025-10-08 23:30:33] 2025-10-09 03:30:01,246 | INFO     | mean y: 2585381.7386363638
[2025-10-08 23:30:33] 2025-10-09 03:30:01,246 | INFO     | -- intersect: -176279870.65657854
[2025-10-08 23:30:33] 2025-10-09 03:30:01,246 | INFO     | intersect: -176279870.65657854
[2025-10-08 23:30:33] 2025-10-09 03:30:01,246 | INFO     | chi2: 0.029320459890792946
[2025-10-08 23:30:33] 2025-10-09 03:30:01,246 | INFO     | -- intersect: -176279870.65657854
[2025-10-08 23:30:33] 2025-10-09 03:30:01,247 | INFO     | current memory leak: 0.10 B/s (using 88 data points, chi2=0.03)
[2025-10-08 23:30:33] 2025-10-09 03:30:01,247 | INFO     | could have reported an average CPU frequency of 2608 MHz (7 samples)
[2025-10-08 23:30:33] 2025-10-09 03:30:01,247 | INFO     | ..............................
[2025-10-08 23:30:33] 2025-10-09 03:30:01,247 | INFO     | . Timing measurements:
[2025-10-08 23:30:33] 2025-10-09 03:30:01,247 | INFO     | . get job = 0 s
[2025-10-08 23:30:33] 2025-10-09 03:30:01,248 | INFO     | . initial setup = 2 s
[2025-10-08 23:30:33] 2025-10-09 03:30:01,248 | INFO     | . payload setup = 6 s
[2025-10-08 23:30:33] 2025-10-09 03:30:01,248 | INFO     | . stage-in = 0 s
[2025-10-08 23:30:33] 2025-10-09 03:30:01,248 | INFO     | . payload execution = 5784 s
[2025-10-08 23:30:33] 2025-10-09 03:30:01,248 | INFO     | . stage-out = 0 s
[2025-10-08 23:30:33] 2025-10-09 03:30:01,248 | INFO     | . log creation = 0 s
[2025-10-08 23:30:33] 2025-10-09 03:30:01,248 | INFO     | ..............................
[2025-10-08 23:30:33] 2025-10-09 03:30:01,449 | INFO     | 
[2025-10-08 23:30:33] 2025-10-09 03:30:01,450 | INFO     | job summary report
[2025-10-08 23:30:33] 2025-10-09 03:30:01,450 | INFO     | --------------------------------------------------
[2025-10-08 23:30:33] 2025-10-09 03:30:01,450 | INFO     | PanDA job id: 6836605318
[2025-10-08 23:30:33] 2025-10-09 03:30:01,450 | INFO     | task id: 46676269
[2025-10-08 23:30:33] 2025-10-09 03:30:01,450 | INFO     | errors: (none)
[2025-10-08 23:30:33] 2025-10-09 03:30:01,451 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 23:30:33] 2025-10-09 03:30:01,451 | INFO     | pilot state: finished 
[2025-10-08 23:30:33] 2025-10-09 03:30:01,451 | INFO     | transexitcode: 0
[2025-10-08 23:30:33] 2025-10-09 03:30:01,451 | INFO     | exeerrorcode: 0
[2025-10-08 23:30:33] 2025-10-09 03:30:01,451 | INFO     | exeerrordiag: 
[2025-10-08 23:30:33] 2025-10-09 03:30:01,451 | INFO     | exitcode: 0
[2025-10-08 23:30:33] 2025-10-09 03:30:01,451 | INFO     | exitmsg: OK
[2025-10-08 23:30:33] 2025-10-09 03:30:01,451 | INFO     | cpuconsumptiontime: 45232 s
[2025-10-08 23:30:33] 2025-10-09 03:30:01,452 | INFO     | nevents: 400
[2025-10-08 23:30:33] 2025-10-09 03:30:01,452 | INFO     | neventsw: 0
[2025-10-08 23:30:33] 2025-10-09 03:30:01,452 | INFO     | pid: 4003298
[2025-10-08 23:30:33] 2025-10-09 03:30:01,452 | INFO     | pgrp: 4003298
[2025-10-08 23:30:33] 2025-10-09 03:30:01,452 | INFO     | corecount: 9
[2025-10-08 23:30:33] 2025-10-09 03:30:01,452 | INFO     | event service: False
[2025-10-08 23:30:33] 2025-10-09 03:30:01,452 | INFO     | sizes: {0: 2348628, 1: 2348883, 5: 2349145, 12: 2349201, 5794: 2376015, 5797: 2385013, 5800: 2385197, 5807: 2385391}
[2025-10-08 23:30:33] 2025-10-09 03:30:01,452 | INFO     | --------------------------------------------------
[2025-10-08 23:30:33] 2025-10-09 03:30:01,452 | INFO     | 
[2025-10-08 23:30:33] 2025-10-09 03:30:01,453 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-08 23:30:33] 2025-10-09 03:30:01,472 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,472 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,473 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,473 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,474 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 23:30:33] 2025-10-09 03:30:01,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,475 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 23:30:33] 2025-10-09 03:30:01,475 | INFO     | job 6836605318 has completed (purged errors)
[2025-10-08 23:30:33] 2025-10-09 03:30:01,475 | INFO     | overall cleanup function is called
[2025-10-08 23:30:33] 2025-10-09 03:30:02,483 | INFO     | --- collectZombieJob: --- 10, [4003298]
[2025-10-08 23:30:33] 2025-10-09 03:30:02,483 | INFO     | zombie collector waiting for pid 4003298
[2025-10-08 23:30:33] 2025-10-09 03:30:02,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 23:30:33] 2025-10-09 03:30:02,483 | INFO     | collected zombie processes
[2025-10-08 23:30:33] 2025-10-09 03:30:02,483 | INFO     | will attempt to kill all subprocesses of pid=4003298
[2025-10-08 23:30:33] 2025-10-09 03:30:02,733 | INFO     | process IDs to be killed: [4003298] (in reverse order)
[2025-10-08 23:30:33] 2025-10-09 03:30:02,804 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 23:30:33] 2025-10-09 03:30:02,805 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 23:30:33] 2025-10-09 03:30:02,814 | INFO     | did not find any defunct processes belonging to 4003298
[2025-10-08 23:30:33] 2025-10-09 03:30:02,823 | INFO     | did not find any defunct processes belonging to 4003298
[2025-10-08 23:30:33] 2025-10-09 03:30:02,824 | INFO     | ready for new job
[2025-10-08 23:30:33] 2025-10-09 03:30:02,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 23:30:33] 2025-10-09 03:30:02,826 | INFO     | ***************************************
[2025-10-08 23:30:33] 2025-10-09 03:30:02,826 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 23:30:33] 2025-10-09 03:30:02,826 | INFO     | ***************************************
[2025-10-08 23:30:33] 2025-10-09 03:30:02,826 | INFO     | 
[2025-10-08 23:30:33] 2025-10-09 03:30:02,828 | INFO     | architecture information:
[2025-10-08 23:30:33] 2025-10-09 03:30:02,828 | INFO     | executing command: cat /etc/os-release
[2025-10-08 23:30:33] 2025-10-09 03:30:02,844 | INFO     | cat /etc/os-release:
[2025-10-08 23:30:33] NAME="CentOS Linux"
[2025-10-08 23:30:33] VERSION="7 (Core)"
[2025-10-08 23:30:33] ID="centos"
[2025-10-08 23:30:33] ID_LIKE="rhel fedora"
[2025-10-08 23:30:33] VERSION_ID="7"
[2025-10-08 23:30:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 23:30:33] ANSI_COLOR="0;31"
[2025-10-08 23:30:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 23:30:33] HOME_URL="https://www.centos.org/"
[2025-10-08 23:30:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 23:30:33] 
[2025-10-08 23:30:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 23:30:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 23:30:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 23:30:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 23:30:33] 
[2025-10-08 23:30:33] 2025-10-09 03:30:02,844 | INFO     | ***************************************
[2025-10-08 23:30:33] 2025-10-09 03:30:03,347 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-08 23:30:33] 2025-10-09 03:30:03,365 | INFO     | sufficient remaining disk space (53301215232 B)
[2025-10-08 23:30:33] 2025-10-09 03:30:03,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 23:30:33] 2025-10-09 03:30:03,365 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 23:30:33] 2025-10-09 03:30:03,366 | INFO     | update_server=False
[2025-10-08 23:30:33] 2025-10-09 03:30:03,366 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 23:30:33] 2025-10-09 03:30:03,366 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 23:30:33] 2025-10-09 03:30:03,366 | INFO     | aborting loop
[2025-10-08 23:30:33] 2025-10-09 03:30:03,376 | INFO     | all data control threads have been joined
[2025-10-08 23:30:33] 2025-10-09 03:30:03,919 | INFO     | all payload control threads have been joined
[2025-10-08 23:30:33] 2025-10-09 03:30:04,242 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 23:30:33] 2025-10-09 03:30:04,371 | INFO     | [job] retrieve thread has finished
[2025-10-08 23:30:33] 2025-10-09 03:30:04,371 | INFO     | [job] job monitor thread has finished
[2025-10-08 23:30:33] 2025-10-09 03:30:04,381 | INFO     | [data] control thread has finished
[2025-10-08 23:30:33] 2025-10-09 03:30:04,417 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 23:30:33] 2025-10-09 03:30:04,429 | INFO     | all job control threads have been joined
[2025-10-08 23:30:33] 2025-10-09 03:30:04,458 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 23:30:33] 2025-10-09 03:30:04,680 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 23:30:33] 2025-10-09 03:30:04,924 | INFO     | [payload] control thread has finished
[2025-10-08 23:30:33] 2025-10-09 03:30:05,177 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 23:30:33] 2025-10-09 03:30:05,246 | INFO     | [payload] failed_post thread has finished
[2025-10-08 23:30:33] 2025-10-09 03:30:05,429 | INFO     | [job] control thread has finished
[2025-10-08 23:30:33] 2025-10-09 03:30:05,458 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 23:30:33] 2025-10-09 03:30:05,599 | INFO     | [data] copytool_in thread has finished
[2025-10-08 23:30:33] 2025-10-09 03:30:05,610 | INFO     | [job] validate thread has finished
[2025-10-08 23:30:33] 2025-10-09 03:30:05,866 | INFO     | [payload] validate_post thread has finished
[2025-10-08 23:30:33] 2025-10-09 03:30:06,247 | INFO     | [data] copytool_out thread has finished
[2025-10-08 23:30:33] 2025-10-09 03:30:06,367 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 23:30:33] 2025-10-09 03:30:07,372 | INFO     | [job] queue monitor thread has finished
[2025-10-08 23:30:33] 2025-10-09 03:30:07,574 | INFO     | [monitor] cgroup control has ended
[2025-10-08 23:30:33] 2025-10-09 03:30:09,182 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 23:30:33] 2025-10-09 03:30:09,958 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139915668764480)>', '<ExcThread(monitor, started 139915169871616)>']
[2025-10-08 23:30:33] 2025-10-09 03:30:14,960 | INFO     | all workflow threads have been joined
[2025-10-08 23:30:33] 2025-10-09 03:30:14,960 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 23:30:33] 2025-10-09 03:30:14,960 | INFO     | traces error code: 0
[2025-10-08 23:30:33] 2025-10-09 03:30:14,961 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 23:30:33] 2025-10-09 03:30:33,020 | INFO     | PID=3996311 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 23:30:33] 2025-10-09 03:30:33,020 | INFO     | .. there are 6 such processes running
[2025-10-08 23:30:33] 2025-10-09 03:30:33,020 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 23:30:33] 2025-10-09 03:30:33,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 23:30:33] 2025-10-09 03:30:33,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 23:30:33] 2025-10-09 03:30:33,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 23:30:33] 2025-10-09 03:30:33,021 | INFO     | [monitor] control thread has ended
[2025-10-08 23:30:33] 2025-10-09 03:30:33,159 [wrapper] ==== pilot stdout END ====
[2025-10-08 23:30:33] 2025-10-09 03:30:33,162 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 23:30:33] 2025-10-09 03:30:33,165 [wrapper] pilotpid: 3996311
[2025-10-08 23:30:33] 2025-10-09 03:30:33,168 [wrapper] Pilot exit status: 0
[2025-10-08 23:30:33] 2025-10-09 03:30:33,177 [wrapper] pandaids: 6836605318
[2025-10-08 23:30:33] 2025-10-09 03:30:33,205 [wrapper] cleanup supervisor_pilot 4137382 3996312
[2025-10-08 23:30:33] 2025-10-09 03:30:33,207 [wrapper] Test setup, not cleaning
[2025-10-08 23:30:33] 2025-10-09 03:30:33,209 [wrapper] apfmon messages muted
[2025-10-08 23:30:33] 2025-10-09 03:30:33,211 [wrapper] ==== wrapper stdout END ====
[2025-10-08 23:30:33] 2025-10-09 03:30:33,213 [wrapper] ==== wrapper stderr END ====
[2025-10-08 23:30:33]  *** Error codes and diagnostics ***
[2025-10-08 23:30:33]     "exeErrorCode": 0,
[2025-10-08 23:30:33]     "exeErrorDiag": "",
[2025-10-08 23:30:33]     "pilotErrorCode": 0,
[2025-10-08 23:30:33]     "pilotErrorDiag": "",
[2025-10-08 23:30:33]  *** Listing of results directory ***
[2025-10-08 23:30:33] total 405816
[2025-10-08 23:30:33] -rw-r--r--. 1 boincer umatlas    557409 Oct  8 18:57 pilot3.tar.gz
[2025-10-08 23:30:33] -rwx------. 1 boincer umatlas     36292 Oct  8 19:21 runpilot2-wrapper.sh
[2025-10-08 23:30:33] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 19:21 queuedata.json
[2025-10-08 23:30:33] -rw-r--r--. 1 boincer umatlas       100 Oct  8 21:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 23:30:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 21:52 run_atlas
[2025-10-08 23:30:33] -rw-r--r--. 1 boincer umatlas       105 Oct  8 21:52 job.xml
[2025-10-08 23:30:33] -rw-r--r--. 2 boincer umatlas 217912915 Oct  8 21:52 EVNT.46676267._000439.pool.root.1
[2025-10-08 23:30:33] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 21:52 start_atlas.sh
[2025-10-08 23:30:33] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 21:52 shared
[2025-10-08 23:30:33] -rw-r--r--. 2 boincer umatlas    569676 Oct  8 21:52 input.tar.gz
[2025-10-08 23:30:33] -rw-r--r--. 1 boincer umatlas         0 Oct  8 21:52 boinc_lockfile
[2025-10-08 23:30:33] -rw-r--r--. 1 boincer umatlas      2549 Oct  8 21:52 pandaJob.out
[2025-10-08 23:30:33] -rw-------. 1 boincer umatlas    979290 Oct  8 21:52 agis_schedconf.cvmfs.json
[2025-10-08 23:30:33] -rw-------. 1 boincer umatlas   1560401 Oct  8 21:52 agis_ddmendpoints.agis.ALL.json
[2025-10-08 23:30:33] drwx------. 5 boincer umatlas      4096 Oct  8 21:52 pilot3
[2025-10-08 23:30:33] -rw-r--r--. 1 boincer umatlas      6658 Oct  8 23:27 init_data.xml
[2025-10-08 23:30:33] -rw-------. 1 boincer umatlas 191344045 Oct  8 23:29 HITS.46676269._010801.pool.root.1
[2025-10-08 23:30:33] -rw-r--r--. 1 boincer umatlas       529 Oct  8 23:29 boinc_task_state.xml
[2025-10-08 23:30:33] -rw-------. 1 boincer umatlas        95 Oct  8 23:29 pilot_heartbeat.json
[2025-10-08 23:30:33] -rw-------. 1 boincer umatlas      1034 Oct  8 23:29 memory_monitor_summary.json
[2025-10-08 23:30:33] -rw-------. 1 boincer umatlas    353159 Oct  8 23:29 log.46676269._010801.job.log.tgz.1
[2025-10-08 23:30:33] -rw-------. 1 boincer umatlas      7807 Oct  8 23:30 heartbeat.json
[2025-10-08 23:30:33] -rw-r--r--. 1 boincer umatlas        27 Oct  8 23:30 wrapper_checkpoint.txt
[2025-10-08 23:30:33] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 23:30 boinc_mmap_file
[2025-10-08 23:30:33] -rw-------. 1 boincer umatlas       822 Oct  8 23:30 pilotlog.txt
[2025-10-08 23:30:33] -rw-------. 1 boincer umatlas    847017 Oct  8 23:30 log.46676269._010801.job.log.1
[2025-10-08 23:30:33] -rw-------. 1 boincer umatlas       357 Oct  8 23:30 output.list
[2025-10-08 23:30:33] -rw-r--r--. 1 boincer umatlas       620 Oct  8 23:30 runtime_log
[2025-10-08 23:30:33] -rw-------. 1 boincer umatlas   1218560 Oct  8 23:30 result.tar.gz
[2025-10-08 23:30:33] -rw-------. 1 boincer umatlas       651 Oct  8 23:30 vzENDmSesQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmToYNDmCu4rLo.diag
[2025-10-08 23:30:33] -rw-r--r--. 1 boincer umatlas      8698 Oct  8 23:30 runtime_log.err
[2025-10-08 23:30:33] -rw-r--r--. 1 boincer umatlas     22374 Oct  8 23:30 stderr.txt
[2025-10-08 23:30:33] HITS file was successfully produced:
[2025-10-08 23:30:33] -rw-------. 1 boincer umatlas 191344045 Oct  8 23:29 shared/HITS.pool.root.1
[2025-10-08 23:30:33]  *** Contents of shared directory: ***
[2025-10-08 23:30:33] total 401440
[2025-10-08 23:30:33] -rw-r--r--. 2 boincer umatlas 217912915 Oct  8 21:52 ATLAS.root_0
[2025-10-08 23:30:33] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 21:52 start_atlas.sh
[2025-10-08 23:30:33] -rw-r--r--. 2 boincer umatlas    569676 Oct  8 21:52 input.tar.gz
[2025-10-08 23:30:33] -rw-------. 1 boincer umatlas 191344045 Oct  8 23:29 HITS.pool.root.1
[2025-10-08 23:30:33] -rw-------. 1 boincer umatlas   1218560 Oct  8 23:30 result.tar.gz
23:30:35 (3992290): run_atlas exited; CPU time 45331.473364
23:30:35 (3992290): called boinc_finish(0)

</stderr_txt>
]]>

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