Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:18:28 (2747093): wrapper (7.7.26015): starting
00:18:28 (2747093): wrapper: running run_atlas (--nthreads 9)
[2025-10-09 00:18:28] Arguments: --nthreads 9
[2025-10-09 00:18:28] Threads: 9
[2025-10-09 00:18:28] Checking for CVMFS
[2025-10-09 00:18:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 00:18:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 00:18:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 00:18:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 00:18:30] 2.13.2.0 633399 124433 463552 151496 3 57 23700751 32935936 17271 16776704 0 146440562 99.549 176965845 29416 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 00:18:30] CVMFS is ok
[2025-10-09 00:18:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 00:18:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 00:18:30] Further information can be found at the LHC@home message board.
[2025-10-09 00:18:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 00:18:30] Checking for apptainer binary...
[2025-10-09 00:18:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 00:18:30] Running /usr/bin/apptainer --version
[2025-10-09 00:18:30] apptainer version 1.4.3-1.el9
[2025-10-09 00:18:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 00:18:31] c6-6-39-1.aglt2.org
[2025-10-09 00:18:31] apptainer works
[2025-10-09 00:18:31] Set ATHENA_PROC_NUMBER=9
[2025-10-09 00:18:31] Set ATHENA_CORE_NUMBER=9
[2025-10-09 00:18:31] Starting ATLAS job with PandaID=6836603174
[2025-10-09 00:18:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 05:39:22]  *** The last 200 lines of the pilot log: ***
[2025-10-09 05:39:22] 2025-10-09 09:15:04,868 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 05:39:22] 2025-10-09 09:15:04,903 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 05:39:22] 2025-10-09 09:15:04,904 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 05:39:22] 2025-10-09 09:15:04,943 | INFO     | fitting pss+swap vs Time
[2025-10-09 05:39:22] 2025-10-09 09:15:04,944 | INFO     | sum of square deviations: 7407586590.71875
[2025-10-09 05:39:22] 2025-10-09 09:15:04,945 | INFO     | sum of deviations: -114960456513.84381
[2025-10-09 05:39:22] 2025-10-09 09:15:04,946 | INFO     | mean x: 1759992439.96875
[2025-10-09 05:39:22] 2025-10-09 09:15:04,946 | INFO     | mean y: 2340037.017361111
[2025-10-09 05:39:22] 2025-10-09 09:15:04,946 | INFO     | -- intersect: 27316166461.02809
[2025-10-09 05:39:22] 2025-10-09 09:15:04,946 | INFO     | intersect: 27316166461.02809
[2025-10-09 05:39:22] 2025-10-09 09:15:04,981 | INFO     | chi2: 3.9153486758046423
[2025-10-09 05:39:22] 2025-10-09 09:15:04,982 | INFO     | sum of square deviations: 7028530814.678439
[2025-10-09 05:39:22] 2025-10-09 09:15:04,984 | INFO     | sum of deviations: -75939433759.22258
[2025-10-09 05:39:22] 2025-10-09 09:15:04,984 | INFO     | mean x: 1759992287.484099
[2025-10-09 05:39:22] 2025-10-09 09:15:04,984 | INFO     | mean y: 2355596.9505300354
[2025-10-09 05:39:22] 2025-10-09 09:15:04,984 | INFO     | -- intersect: 19018110276.86454
[2025-10-09 05:39:22] 2025-10-09 09:15:04,984 | INFO     | intersect: 19018110276.86454
[2025-10-09 05:39:22] 2025-10-09 09:15:04,984 | INFO     | chi2: 2.4059319144675926
[2025-10-09 05:39:22] 2025-10-09 09:15:04,985 | INFO     | current chi2=2.4059319144675926 (change=38.55127311303507 %)
[2025-10-09 05:39:22] 2025-10-09 09:15:04,985 | INFO     | sum of square deviations: 6662586160.967599
[2025-10-09 05:39:22] 2025-10-09 09:15:05,023 | INFO     | sum of deviations: -72303179374.40297
[2025-10-09 05:39:22] 2025-10-09 09:15:05,023 | INFO     | mean x: 1759992134.9892087
[2025-10-09 05:39:22] 2025-10-09 09:15:05,023 | INFO     | mean y: 2357109.5323741008
[2025-10-09 05:39:22] 2025-10-09 09:15:05,023 | INFO     | -- intersect: 19102001595.808315
[2025-10-09 05:39:22] 2025-10-09 09:15:05,023 | INFO     | intersect: 19102001595.808315
[2025-10-09 05:39:22] 2025-10-09 09:15:05,024 | INFO     | chi2: 2.4048590507880894
[2025-10-09 05:39:22] 2025-10-09 09:15:05,024 | INFO     | current chi2=2.4048590507880894 (change=0.04459243726107787 %)
[2025-10-09 05:39:22] 2025-10-09 09:15:05,024 | INFO     | right removable region: 277
[2025-10-09 05:39:22] 2025-10-09 09:15:05,024 | INFO     | sum of square deviations: 7028324874.742016
[2025-10-09 05:39:22] 2025-10-09 09:15:05,061 | INFO     | sum of deviations: -162427914148.89752
[2025-10-09 05:39:22] 2025-10-09 09:15:05,061 | INFO     | mean x: 1759992592.4946997
[2025-10-09 05:39:22] 2025-10-09 09:15:05,061 | INFO     | mean y: 2358997.734982332
[2025-10-09 05:39:22] 2025-10-09 09:15:05,061 | INFO     | -- intersect: 40676620761.55506
[2025-10-09 05:39:22] 2025-10-09 09:15:05,061 | INFO     | intersect: 40676620761.55506
[2025-10-09 05:39:22] 2025-10-09 09:15:05,062 | INFO     | chi2: 2.1807023276753226
[2025-10-09 05:39:22] 2025-10-09 09:15:05,062 | INFO     | current chi2=2.1807023276753226 (change=44.303751511296326 %)
[2025-10-09 05:39:22] 2025-10-09 09:15:05,062 | INFO     | sum of square deviations: 6662243460.910042
[2025-10-09 05:39:22] 2025-10-09 09:15:05,063 | INFO     | sum of deviations: -154033756756.31662
[2025-10-09 05:39:22] 2025-10-09 09:15:05,064 | INFO     | mean x: 1759992745.0179856
[2025-10-09 05:39:22] 2025-10-09 09:15:05,064 | INFO     | mean y: 2355479.8633093527
[2025-10-09 05:39:22] 2025-10-09 09:15:05,064 | INFO     | -- intersect: 40694097829.06158
[2025-10-09 05:39:22] 2025-10-09 09:15:05,064 | INFO     | intersect: 40694097829.06158
[2025-10-09 05:39:22] 2025-10-09 09:15:05,099 | INFO     | chi2: 2.163968856762775
[2025-10-09 05:39:22] 2025-10-09 09:15:05,100 | INFO     | current chi2=2.163968856762775 (change=0.767343194904816 %)
[2025-10-09 05:39:22] 2025-10-09 09:15:05,100 | INFO     | left removable region: 20
[2025-10-09 05:39:22] 2025-10-09 09:15:05,100 | INFO     | sum of square deviations: 5263607394.101194
[2025-10-09 05:39:22] 2025-10-09 09:15:05,102 | INFO     | sum of deviations: -86601663698.62253
[2025-10-09 05:39:22] 2025-10-09 09:15:05,102 | INFO     | mean x: 1759992714.5914397
[2025-10-09 05:39:22] 2025-10-09 09:15:05,102 | INFO     | mean y: 2362551.898832685
[2025-10-09 05:39:22] 2025-10-09 09:15:05,102 | INFO     | -- intersect: 28959365946.92509
[2025-10-09 05:39:22] 2025-10-09 09:15:05,102 | INFO     | intersect: 28959365946.92509
[2025-10-09 05:39:22] 2025-10-09 09:15:05,102 | INFO     | chi2: 0.5665706968393793
[2025-10-09 05:39:22] 2025-10-09 09:15:05,102 | INFO     | -- intersect: 28959365946.92509
[2025-10-09 05:39:22] 2025-10-09 09:15:05,102 | INFO     | current memory leak: -16.45 B/s (using 257 data points, chi2=0.57)
[2025-10-09 05:39:22] 2025-10-09 09:15:05,137 | INFO     | could have reported an average CPU frequency of 2707 MHz (13 samples)
[2025-10-09 05:39:22] 2025-10-09 09:15:05,137 | INFO     | ..............................
[2025-10-09 05:39:22] 2025-10-09 09:15:05,138 | INFO     | . Timing measurements:
[2025-10-09 05:39:22] 2025-10-09 09:15:05,138 | INFO     | . get job = 0 s
[2025-10-09 05:39:22] 2025-10-09 09:15:05,138 | INFO     | . initial setup = 4 s
[2025-10-09 05:39:22] 2025-10-09 09:15:05,138 | INFO     | . payload setup = 36 s
[2025-10-09 05:39:22] 2025-10-09 09:15:05,138 | INFO     | . stage-in = 0 s
[2025-10-09 05:39:22] 2025-10-09 09:15:05,138 | INFO     | . payload execution = 17575 s
[2025-10-09 05:39:22] 2025-10-09 09:15:05,138 | INFO     | . stage-out = 9 s
[2025-10-09 05:39:22] 2025-10-09 09:15:05,138 | INFO     | . log creation = 2 s
[2025-10-09 05:39:22] 2025-10-09 09:15:05,138 | INFO     | ..............................
[2025-10-09 05:39:22] 2025-10-09 09:15:05,924 | INFO     | 
[2025-10-09 05:39:22] 2025-10-09 09:15:05,924 | INFO     | job summary report
[2025-10-09 05:39:22] 2025-10-09 09:15:05,924 | INFO     | --------------------------------------------------
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | PanDA job id: 6836603174
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | task id: 46676269
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | errors: (none)
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | pilot state: finished 
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | transexitcode: 0
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | exeerrorcode: 0
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | exeerrordiag: 
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | exitcode: 0
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | exitmsg: OK
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | cpuconsumptiontime: 45397 s
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | nevents: 400
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | neventsw: 0
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | pid: 2764780
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | pgrp: 2764780
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | corecount: 9
[2025-10-09 05:39:22] 2025-10-09 09:15:05,925 | INFO     | event service: False
[2025-10-09 05:39:22] 2025-10-09 09:15:05,926 | INFO     | sizes: {0: 2348681, 1: 2348880, 12: 2348880, 23: 2348908, 26: 2349198, 34: 2349226, 17618: 2381370, 17628: 2390368, 17629: 2390424, 17683: 2390618}
[2025-10-09 05:39:22] 2025-10-09 09:15:05,926 | INFO     | --------------------------------------------------
[2025-10-09 05:39:22] 2025-10-09 09:15:05,926 | INFO     | 
[2025-10-09 05:39:22] 2025-10-09 09:15:05,926 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-09 05:39:22] 2025-10-09 09:15:06,354 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,355 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,355 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,355 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,355 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,357 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 05:39:22] 2025-10-09 09:15:06,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,357 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 05:39:22] 2025-10-09 09:15:06,357 | INFO     | job 6836603174 has completed (purged errors)
[2025-10-09 05:39:22] 2025-10-09 09:15:06,357 | INFO     | overall cleanup function is called
[2025-10-09 05:39:22] 2025-10-09 09:15:07,415 | INFO     | --- collectZombieJob: --- 10, [2764780]
[2025-10-09 05:39:22] 2025-10-09 09:15:07,415 | INFO     | zombie collector waiting for pid 2764780
[2025-10-09 05:39:22] 2025-10-09 09:15:07,415 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 05:39:22] 2025-10-09 09:15:07,416 | INFO     | collected zombie processes
[2025-10-09 05:39:22] 2025-10-09 09:15:07,416 | INFO     | will attempt to kill all subprocesses of pid=2764780
[2025-10-09 05:39:22] 2025-10-09 09:15:10,317 | INFO     | process IDs to be killed: [2764780] (in reverse order)
[2025-10-09 05:39:22] 2025-10-09 09:15:11,328 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 05:39:22] 2025-10-09 09:15:11,328 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 05:39:22] 2025-10-09 09:15:11,424 | INFO     | did not find any defunct processes belonging to 2764780
[2025-10-09 05:39:22] 2025-10-09 09:15:11,522 | INFO     | did not find any defunct processes belonging to 2764780
[2025-10-09 05:39:22] 2025-10-09 09:15:11,522 | INFO     | ready for new job
[2025-10-09 05:39:22] 2025-10-09 09:15:11,522 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 05:39:22] 2025-10-09 09:15:11,524 | INFO     | ***************************************
[2025-10-09 05:39:22] 2025-10-09 09:15:11,525 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 05:39:22] 2025-10-09 09:15:11,525 | INFO     | ***************************************
[2025-10-09 05:39:22] 2025-10-09 09:15:11,525 | INFO     | 
[2025-10-09 05:39:22] 2025-10-09 09:15:11,563 | INFO     | architecture information:
[2025-10-09 05:39:22] 2025-10-09 09:15:11,599 | INFO     | executing command: cat /etc/os-release
[2025-10-09 05:39:22] 2025-10-09 09:15:11,736 | INFO     | cat /etc/os-release:
[2025-10-09 05:39:22] NAME="CentOS Linux"
[2025-10-09 05:39:22] VERSION="7 (Core)"
[2025-10-09 05:39:22] ID="centos"
[2025-10-09 05:39:22] ID_LIKE="rhel fedora"
[2025-10-09 05:39:22] VERSION_ID="7"
[2025-10-09 05:39:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 05:39:22] ANSI_COLOR="0;31"
[2025-10-09 05:39:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 05:39:22] HOME_URL="https://www.centos.org/"
[2025-10-09 05:39:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 05:39:22] 
[2025-10-09 05:39:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 05:39:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 05:39:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 05:39:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 05:39:22] 
[2025-10-09 05:39:22] 2025-10-09 09:15:11,736 | INFO     | ***************************************
[2025-10-09 05:39:22] 2025-10-09 09:15:12,241 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-09 05:39:22] 2025-10-09 09:15:12,301 | INFO     | sufficient remaining disk space (74778148864 B)
[2025-10-09 05:39:22] 2025-10-09 09:15:12,301 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 05:39:22] 2025-10-09 09:15:12,301 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 05:39:22] 2025-10-09 09:15:12,301 | INFO     | update_server=False
[2025-10-09 05:39:22] 2025-10-09 09:15:12,301 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 05:39:22] 2025-10-09 09:15:12,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 05:39:22] 2025-10-09 09:15:12,680 | INFO     | all data control threads have been joined
[2025-10-09 05:39:22] 2025-10-09 09:15:12,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 05:39:22] 2025-10-09 09:15:12,825 | INFO     | aborting loop
[2025-10-09 05:39:22] 2025-10-09 09:15:13,307 | INFO     | [job] retrieve thread has finished
[2025-10-09 05:39:22] 2025-10-09 09:15:13,342 | INFO     | all payload control threads have been joined
[2025-10-09 05:39:22] 2025-10-09 09:15:13,502 | INFO     | all job control threads have been joined
[2025-10-09 05:39:22] 2025-10-09 09:15:13,686 | INFO     | [data] control thread has finished
[2025-10-09 05:39:22] 2025-10-09 09:15:13,789 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 05:39:22] 2025-10-09 09:15:13,796 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 05:39:22] 2025-10-09 09:15:13,826 | INFO     | [job] validate thread has finished
[2025-10-09 05:39:22] 2025-10-09 09:15:13,832 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 05:39:22] 2025-10-09 09:15:13,833 | INFO     | [job] job monitor thread has finished
[2025-10-09 05:39:22] 2025-10-09 09:15:14,028 | INFO     | [payload] validate_post thread has finished
[2025-10-09 05:39:22] 2025-10-09 09:15:14,315 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 05:39:22] 2025-10-09 09:15:14,348 | INFO     | [payload] control thread has finished
[2025-10-09 05:39:22] 2025-10-09 09:15:14,406 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 05:39:22] 2025-10-09 09:15:14,440 | INFO     | [data] copytool_in thread has finished
[2025-10-09 05:39:22] 2025-10-09 09:15:14,508 | INFO     | [job] control thread has finished
[2025-10-09 05:39:22] 2025-10-09 09:15:14,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 05:39:22] 2025-10-09 09:15:14,704 | INFO     | [payload] failed_post thread has finished
[2025-10-09 05:39:22] 2025-10-09 09:15:15,555 | INFO     | [job] queue monitor thread has finished
[2025-10-09 05:39:22] 2025-10-09 09:15:15,796 | INFO     | [data] copytool_out thread has finished
[2025-10-09 05:39:22] 2025-10-09 09:15:16,311 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 05:39:22] 2025-10-09 09:15:41,886 | INFO     | PID=2751743 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 05:39:22] 2025-10-09 09:15:41,887 | INFO     | .. there are 18 such processes running
[2025-10-09 05:39:22] 2025-10-09 09:15:41,911 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 05:39:22] 2025-10-09 09:15:41,911 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 05:39:22] 2025-10-09 09:15:41,911 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 05:39:22] 2025-10-09 09:15:55,818 | INFO     | [monitor] cgroup control has ended
[2025-10-09 05:39:22] 2025-10-09 09:15:56,896 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139950230665024)>', '<ExcThread(monitor, started 139949722543872)>']
[2025-10-09 05:39:22] 2025-10-09 09:15:57,001 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 05:39:22] 2025-10-09 09:15:57,001 | INFO     | [monitor] control thread has ended
[2025-10-09 05:39:22] 2025-10-09 09:16:01,922 | INFO     | all workflow threads have been joined
[2025-10-09 05:39:22] 2025-10-09 09:16:01,922 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 05:39:22] 2025-10-09 09:16:01,923 | INFO     | traces error code: 0
[2025-10-09 05:39:22] 2025-10-09 09:16:01,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 05:39:22] 2025-10-09 09:16:03,875 [wrapper] ==== pilot stdout END ====
[2025-10-09 05:39:22] 2025-10-09 09:16:03,909 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 05:39:22] 2025-10-09 09:16:03,940 [wrapper] pilotpid: 2751743
[2025-10-09 05:39:22] 2025-10-09 09:16:04,004 [wrapper] Pilot exit status: 0
[2025-10-09 05:39:22] 2025-10-09 09:16:04,218 [wrapper] pandaids: 6836603174
[2025-10-09 05:39:22] 2025-10-09 09:16:05,064 [wrapper] cleanup supervisor_pilot 3360830 2751744
[2025-10-09 05:39:22] 2025-10-09 09:16:05,119 [wrapper] Test setup, not cleaning
[2025-10-09 05:39:22] 2025-10-09 09:16:05,177 [wrapper] apfmon messages muted
[2025-10-09 05:39:22] 2025-10-09 09:16:05,247 [wrapper] ==== wrapper stdout END ====
[2025-10-09 05:39:22] 2025-10-09 09:16:05,285 [wrapper] ==== wrapper stderr END ====
[2025-10-09 05:39:22]  *** Error codes and diagnostics ***
[2025-10-09 05:39:22]     "exeErrorCode": 0,
[2025-10-09 05:39:22]     "exeErrorDiag": "",
[2025-10-09 05:39:22]     "pilotErrorCode": 0,
[2025-10-09 05:39:22]     "pilotErrorDiag": "",
[2025-10-09 05:39:22]  *** Listing of results directory ***
[2025-10-09 05:39:22] total 416224
[2025-10-09 05:39:22] -rw-r--r--. 1 boincer umatlas    557409 Oct  8 18:57 pilot3.tar.gz
[2025-10-09 05:39:22] -rwx------. 1 boincer umatlas     36292 Oct  8 19:03 runpilot2-wrapper.sh
[2025-10-09 05:39:22] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 19:05 queuedata.json
[2025-10-09 05:39:22] -rw-r--r--. 1 boincer umatlas       100 Oct  9 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 05:39:22] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 00:18 run_atlas
[2025-10-09 05:39:22] -rw-r--r--. 1 boincer umatlas       105 Oct  9 00:18 job.xml
[2025-10-09 05:39:22] -rw-r--r--. 2 boincer umatlas 222371135 Oct  9 00:18 EVNT.46676267._000381.pool.root.1
[2025-10-09 05:39:22] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 00:18 start_atlas.sh
[2025-10-09 05:39:22] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 00:18 shared
[2025-10-09 05:39:22] -rw-r--r--. 2 boincer umatlas    569681 Oct  9 00:18 input.tar.gz
[2025-10-09 05:39:22] -rw-r--r--. 1 boincer umatlas         0 Oct  9 00:18 boinc_lockfile
[2025-10-09 05:39:22] -rw-r--r--. 1 boincer umatlas      2548 Oct  9 00:18 pandaJob.out
[2025-10-09 05:39:22] -rw-------. 1 boincer umatlas    979306 Oct  9 00:19 agis_schedconf.cvmfs.json
[2025-10-09 05:39:22] drwx------. 5 boincer umatlas      4096 Oct  9 00:19 pilot3
[2025-10-09 05:39:22] -rw-------. 1 boincer umatlas 194590490 Oct  9 05:11 HITS.46676269._009444.pool.root.1
[2025-10-09 05:39:22] -rw-r--r--. 1 boincer umatlas       528 Oct  9 05:12 boinc_task_state.xml
[2025-10-09 05:39:22] -rw-------. 1 boincer umatlas      1041 Oct  9 05:13 memory_monitor_summary.json
[2025-10-09 05:39:22] -rw-------. 1 boincer umatlas   1560401 Oct  9 05:14 agis_ddmendpoints.agis.ALL.json
[2025-10-09 05:39:22] -rw-------. 1 boincer umatlas    523715 Oct  9 05:14 log.46676269._009444.job.log.tgz.1
[2025-10-09 05:39:22] -rw-------. 1 boincer umatlas      7826 Oct  9 05:15 heartbeat.json
[2025-10-09 05:39:22] -rw-------. 1 boincer umatlas        95 Oct  9 05:15 pilot_heartbeat.json
[2025-10-09 05:39:22] -rw-------. 1 boincer umatlas      4824 Oct  9 05:16 pilotlog.txt
[2025-10-09 05:39:22] -rw-------. 1 boincer umatlas   2153907 Oct  9 05:16 log.46676269._009444.job.log.1
[2025-10-09 05:39:22] -rw-------. 1 boincer umatlas       357 Oct  9 05:16 output.list
[2025-10-09 05:39:22] -rw-r--r--. 1 boincer umatlas       620 Oct  9 05:16 runtime_log
[2025-10-09 05:39:22] -rw-------. 1 boincer umatlas   2693120 Oct  9 05:16 result.tar.gz
[2025-10-09 05:39:22] -rw-------. 1 boincer umatlas       657 Oct  9 05:16 wOlKDmmMsQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDme3MMDmhx268m.diag
[2025-10-09 05:39:22] -rw-r--r--. 1 boincer umatlas      8709 Oct  9 05:16 runtime_log.err
[2025-10-09 05:39:22] -rw-r--r--. 1 boincer umatlas      6840 Oct  9 05:39 init_data.xml
[2025-10-09 05:39:22] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 05:39 boinc_mmap_file
[2025-10-09 05:39:22] -rw-r--r--. 1 boincer umatlas        26 Oct  9 05:39 wrapper_checkpoint.txt
[2025-10-09 05:39:22] -rw-r--r--. 1 boincer umatlas     21006 Oct  9 05:39 stderr.txt
[2025-10-09 05:39:22] HITS file was successfully produced:
[2025-10-09 05:39:22] -rw-------. 1 boincer umatlas 194590490 Oct  9 05:11 shared/HITS.pool.root.1
[2025-10-09 05:39:22]  *** Contents of shared directory: ***
[2025-10-09 05:39:22] total 410404
[2025-10-09 05:39:22] -rw-r--r--. 2 boincer umatlas 222371135 Oct  9 00:18 ATLAS.root_0
[2025-10-09 05:39:22] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 00:18 start_atlas.sh
[2025-10-09 05:39:22] -rw-r--r--. 2 boincer umatlas    569681 Oct  9 00:18 input.tar.gz
[2025-10-09 05:39:22] -rw-------. 1 boincer umatlas 194590490 Oct  9 05:11 HITS.pool.root.1
[2025-10-09 05:39:22] -rw-------. 1 boincer umatlas   2693120 Oct  9 05:16 result.tar.gz
05:39:24 (2747093): run_atlas exited; CPU time 45894.477700
05:39:24 (2747093): called boinc_finish(0)

</stderr_txt>
]]>

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