Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-10 10:09:42 (5364): vboxwrapper version 26210
2025-10-10 10:09:42 (5364): BOINC client version: 8.0.2
2025-10-10 10:09:43 (5364): Detected: VirtualBox VboxManage Interface (Version: 6.1.18)
2025-10-10 10:09:44 (5364): Successfully copied 'init_data.xml' to the shared directory.
2025-10-10 10:09:44 (5364): Create VM. (boinc_f7dfb3ece65b287e, slot#0)
2025-10-10 10:09:45 (5364): Setting Memory Size for VM. (5900MB)
2025-10-10 10:09:45 (5364): Setting CPU Count for VM. (2)
2025-10-10 10:09:45 (5364): Setting Chipset Options for VM.
2025-10-10 10:09:45 (5364): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-10 10:09:46 (5364): Setting Boot Options for VM.
2025-10-10 10:09:46 (5364): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-10 10:09:47 (5364): Enabling VM Network Access.
2025-10-10 10:09:47 (5364): Disabling USB Support for VM.
2025-10-10 10:09:47 (5364): Disabling COM Port Support for VM.
2025-10-10 10:09:47 (5364): Disabling LPT Port Support for VM.
2025-10-10 10:09:48 (5364): Disabling Audio Support for VM.
2025-10-10 10:09:48 (5364): Disabling Clipboard Support for VM.
2025-10-10 10:09:48 (5364): Disabling Drag and Drop Support for VM.
2025-10-10 10:09:49 (5364): Adding storage controller(s) to VM.
2025-10-10 10:09:49 (5364): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-10 10:09:50 (5364): Adding VirtualBox Guest Additions to VM.
2025-10-10 10:09:50 (5364): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-10 10:09:51 (5364): forwarding host port 61404 to guest port 80
2025-10-10 10:09:51 (5364): Enabling remote desktop for VM.
2025-10-10 10:09:51 (5364): Enabling shared directory for VM.
2025-10-10 10:09:52 (5364): Starting VM using VBoxManage interface. (boinc_f7dfb3ece65b287e, slot#0)
2025-10-10 10:10:00 (5364): Successfully started VM. (PID = '10992')
2025-10-10 10:10:00 (5364): Reporting VM Process ID to BOINC.
2025-10-10 10:10:00 (5364): Guest Log: BIOS: VirtualBox 6.1.18
2025-10-10 10:10:00 (5364): Guest Log: CPUID EDX: 0x178bfbff
2025-10-10 10:10:00 (5364): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-10 10:10:00 (5364): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-10 10:10:00 (5364): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-10 10:10:00 (5364): Detected: Web Application Enabled (http://localhost:61404)
2025-10-10 10:10:00 (5364): Detected: Remote Desktop Enabled (localhost:61405)
2025-10-10 10:10:00 (5364): Preference change detected
2025-10-10 10:10:00 (5364): Setting CPU throttle for VM. (100%)
2025-10-10 10:10:00 (5364): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-10 10:10:02 (5364): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-10 10:10:02 (5364): Guest Log: BIOS: Booting from Hard Disk...
2025-10-10 10:10:05 (5364): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-10 10:10:05 (5364): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-10 10:10:05 (5364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-10 10:10:11 (5364): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-10 10:10:11 (5364): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-10 10:10:25 (5364): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-10 10:10:25 (5364): Guest Log: 00:00:00.000234 main     Log opened 2025-10-10T10:10:23.759165000Z
2025-10-10 10:10:25 (5364): Guest Log: 00:00:00.000451 main     OS Product: Linux
2025-10-10 10:10:25 (5364): Guest Log: 00:00:00.000509 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-10 10:10:25 (5364): Guest Log: 00:00:00.000625 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-10 10:10:25 (5364): Guest Log: 00:00:00.000675 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-10 10:10:25 (5364): Guest Log: 00:00:00.000677 main     Process ID: 1327
2025-10-10 10:10:25 (5364): Guest Log: 00:00:00.000678 main     Package type: LINUX_64BITS_GENERIC
2025-10-10 10:10:25 (5364): Guest Log: 00:00:00.004255 main     5.2.32 r132073 started. Verbose level = 0
2025-10-10 10:10:25 (5364): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-10 10:10:25 (5364): Guest Log: [INFO] Mounting shared directory
2025-10-10 10:10:25 (5364): Guest Log: [INFO] Checking for init_data.xml
2025-10-10 10:10:30 (5364): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-10 10:10:30 (5364): Guest Log: [INFO] Detected branch: prod
2025-10-10 10:10:31 (5364): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-10 10:10:31 (5364): Guest Log: Copying input files
2025-10-10 10:10:33 (5364): Guest Log: Copied input files into RunAtlas.
2025-10-10 10:10:33 (5364): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-10-10 10:10:35 (5364): Guest Log: 00:00:10.015498 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 076 874 000ns (GuestNow=1 760 083 834 693 177 000 ns GuestLast=1 760 091 023 770 051 000 ns fSetTimeLastLoop=true )
2025-10-10 10:10:44 (5364): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-10 10:10:44 (5364): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-10 10:10:44 (5364): Guest Log: 2.6.3.0 1601 0 29568 151538 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-10-10 10:10:45 (5364): Guest Log: copied the webapp to /var/www
2025-10-10 10:10:45 (5364): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-10 10:10:45 (5364): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-10 10:10:46 (5364): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-10 10:10:46 (5364): Guest Log:  *** Starting ATLAS job. (PandaID=6836606982 taskID=46676269) ***
2025-10-10 11:50:09 (5364): Status Report: Elapsed Time: '6000.000000'
2025-10-10 11:50:09 (5364): Status Report: CPU Time: '11124.265625'
2025-10-10 11:52:00 (5364): VM state change detected. (old = 'running', new = 'paused')
2025-10-10 11:52:20 (5364): VM state change detected. (old = 'paused', new = 'running')
2025-10-10 13:30:50 (5364): Status Report: Elapsed Time: '12000.000000'
2025-10-10 13:30:50 (5364): Status Report: CPU Time: '23084.843750'
2025-10-10 13:39:18 (5364): VM state change detected. (old = 'running', new = 'paused')
2025-10-10 13:39:36 (5364): VM state change detected. (old = 'paused', new = 'running')
2025-10-10 13:40:27 (5364): VM state change detected. (old = 'running', new = 'paused')
2025-10-10 13:40:47 (5364): VM state change detected. (old = 'paused', new = 'running')
2025-10-10 15:11:52 (5364): Status Report: Elapsed Time: '18000.000000'
2025-10-10 15:11:52 (5364): Status Report: CPU Time: '35042.156250'
2025-10-10 16:52:05 (5364): Status Report: Elapsed Time: '24000.000000'
2025-10-10 16:52:05 (5364): Status Report: CPU Time: '46988.734375'
2025-10-10 17:41:11 (5364): VM state change detected. (old = 'running', new = 'paused')
2025-10-10 17:41:31 (5364): VM state change detected. (old = 'paused', new = 'running')
2025-10-10 18:32:47 (5364): Status Report: Elapsed Time: '30000.000000'
2025-10-10 18:32:47 (5364): Status Report: CPU Time: '58946.656250'
2025-10-10 20:12:40 (5364): VM state change detected. (old = 'running', new = 'paused')
2025-10-10 20:13:00 (5364): VM state change detected. (old = 'paused', new = 'running')
2025-10-10 20:13:23 (5364): Status Report: Elapsed Time: '36000.000000'
2025-10-10 20:13:23 (5364): Status Report: CPU Time: '70897.906250'
2025-10-10 20:27:46 (5364): Guest Log:  *** Job finished ***
2025-10-10 20:27:46 (5364): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:25:46,130 | INFO     | job.realtimelogging is not enabled
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:25:47,132 | INFO     | [payload] run_realtimelog thread has finished
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:18,208 | INFO     | [monitor] cgroup control has ended
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:18,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140436166248256)>', '<ExcThread(monitor, started 140435859154688)>']
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:19,600 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:19,601 | INFO     | [monitor] control thread has ended
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:23,714 | INFO     | all workflow threads have been joined
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:23,714 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:23,715 | INFO     | traces error code: 0
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:23,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:23,826 [wrapper] ==== pilot stdout END ====
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:23,831 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:23,836 [wrapper] pilotpid: 5976
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:23,841 [wrapper] Pilot exit status: 0
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:23,870 [wrapper] pandaids: 6836606982
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:23,923 [wrapper] cleanup supervisor_pilot 17791 5977
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:23,933 [wrapper] Test setup, not cleaning
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:23,941 [wrapper] apfmon messages muted
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:23,948 [wrapper] ==== wrapper stdout END ====
2025-10-10 20:27:46 (5364): Guest Log: 2025-10-10 18:26:23,954 [wrapper] ==== wrapper stderr END ====
2025-10-10 20:27:46 (5364): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 20:27:46 (5364): Guest Log:     "exeErrorCode": 0,
2025-10-10 20:27:46 (5364): Guest Log:     "exeErrorDiag": "",
2025-10-10 20:27:46 (5364): Guest Log:     "pilotErrorCode": 0,
2025-10-10 20:27:46 (5364): Guest Log:     "pilotErrorDiag": "",
2025-10-10 20:27:46 (5364): Guest Log:  *** Listing of results directory ***
2025-10-10 20:27:46 (5364): Guest Log: total 203204
2025-10-10 20:27:46 (5364): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  8 23:22 pilot3.tar.gz
2025-10-10 20:27:46 (5364): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  8 23:48 queuedata.json
2025-10-10 20:27:46 (5364): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  8 23:48 runpilot2-wrapper.sh
2025-10-10 20:27:46 (5364): Guest Log: -rwxr-xr-x. 1 atlas atlas      9106 Oct 10 08:10 init_data.xml
2025-10-10 20:27:46 (5364): Guest Log: -rwxr-xr-x. 1 atlas atlas    569678 Oct 10 08:10 input.tar.gz
2025-10-10 20:27:46 (5364): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 10 08:10 start_atlas.sh
2025-10-10 20:27:46 (5364): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 10 08:10 EVNT.46676267._000474.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 20:27:46 (5364): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct 10 08:10 pandaJob.out
2025-10-10 20:27:46 (5364): Guest Log: -rw-------. 1 atlas atlas    975454 Oct 10 08:11 agis_schedconf.cvmfs.json
2025-10-10 20:27:46 (5364): Guest Log: drwx------. 5 atlas atlas      4096 Oct 10 08:11 pilot3
2025-10-10 20:27:46 (5364): Guest Log: -rw-------. 1 atlas atlas 192838112 Oct 10 18:24 HITS.46676269._011599.pool.root.1
2025-10-10 20:27:46 (5364): Guest Log: -rw-------. 1 atlas atlas      1028 Oct 10 18:25 memory_monitor_summary.json
2025-10-10 20:27:46 (5364): Guest Log: -rw-------. 1 atlas atlas        95 Oct 10 18:25 pilot_heartbeat.json
2025-10-10 20:27:46 (5364): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 10 18:25 agis_ddmendpoints.agis.ALL.json
2025-10-10 20:27:46 (5364): Guest Log: -rw-------. 1 atlas atlas    668653 Oct 10 18:25 log.46676269._011599.job.log.tgz.1
2025-10-10 20:27:46 (5364): Guest Log: -rw-------. 1 atlas atlas      7819 Oct 10 18:25 heartbeat.json
2025-10-10 20:27:46 (5364): Guest Log: -rw-------. 1 atlas atlas      4684 Oct 10 18:26 pilotlog.txt
2025-10-10 20:27:46 (5364): Guest Log: -rw-------. 1 atlas atlas   5033908 Oct 10 18:26 log.46676269._011599.job.log.1
2025-10-10 20:27:46 (5364): Guest Log: -rw-------. 1 atlas atlas       357 Oct 10 18:26 output.list
2025-10-10 20:27:46 (5364): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 10 18:26 runtime_log
2025-10-10 20:27:46 (5364): Guest Log: -rw-------. 1 atlas atlas   5724160 Oct 10 18:26 result.tar.gz
2025-10-10 20:27:46 (5364): Guest Log: -rw-r--r--. 1 atlas atlas      8646 Oct 10 18:26 runtime_log.err
2025-10-10 20:27:46 (5364): Guest Log: -rw-------. 1 atlas atlas       661 Oct 10 18:26 0zfKDmW4sQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDm2FNMDm9axCGm.diag
2025-10-10 20:27:46 (5364): Guest Log: Looking for outputfile HITS.46676269._011599.pool.root.1
2025-10-10 20:27:46 (5364): Guest Log: HITS file was successfully produced
2025-10-10 20:27:46 (5364): Guest Log: -rw-------. 1 atlas atlas 192838112 Oct 10 18:24 /home/atlas/RunAtlas/HITS.46676269._011599.pool.root.1
2025-10-10 20:27:49 (5364): Guest Log: Successfully finished the ATLAS job!
2025-10-10 20:27:49 (5364): Guest Log: Copying the results back to the shared directory!
2025-10-10 20:27:49 (5364): Guest Log:  *** Contents of shared directory: ***
2025-10-10 20:27:49 (5364): Guest Log: total 409220
2025-10-10 20:27:49 (5364): Guest Log: -rwxrwxrwx. 1 root root 219870005 Oct 10 08:09 ATLAS.root_0
2025-10-10 20:27:49 (5364): Guest Log: -rwxrwxrwx. 1 root root 192838112 Oct 10  2025 HITS.pool.root.1
2025-10-10 20:27:49 (5364): Guest Log: -rwxrwxrwx. 1 root root      9106 Oct 10 08:09 init_data.xml
2025-10-10 20:27:49 (5364): Guest Log: -rwxrwxrwx. 1 root root    569678 Oct  9 01:18 input.tar.gz
2025-10-10 20:27:49 (5364): Guest Log: -rwxrwxrwx. 1 root root   5724160 Oct 10  2025 result.tar.gz
2025-10-10 20:27:49 (5364): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  9 01:18 start_atlas.sh
2025-10-10 20:27:49 (5364): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 20:27:49 (5364): VM Completion File Detected.
2025-10-10 20:27:49 (5364): Powering off VM.
2025-10-10 20:27:50 (5364): Successfully stopped VM.
2025-10-10 20:27:50 (5364): Deregistering VM. (boinc_f7dfb3ece65b287e, slot#0)
2025-10-10 20:27:50 (5364): Removing network bandwidth throttle group from VM.
2025-10-10 20:27:51 (5364): Removing VM from VirtualBox.
2025-10-10 20:27:56 (5364): called boinc_finish(0)

</stderr_txt>
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