Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:07:16 (665242): wrapper (7.7.26015): starting
21:07:16 (665242): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 21:07:16] Arguments: --nthreads 8
[2025-10-08 21:07:16] Threads: 8
[2025-10-08 21:07:16] Checking for CVMFS
[2025-10-08 21:07:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 21:07:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 21:07:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 21:07:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 21:07:17] 2.13.2.0 1483043 124259 496960 151490 3 713 37508418 40960000 21453 16776704 0 423837442 99.753 279154860 16789 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-08 21:07:17] CVMFS is ok
[2025-10-08 21:07:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 21:07:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 21:07:17] Further information can be found at the LHC@home message board.
[2025-10-08 21:07:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 21:07:17] Checking for apptainer binary...
[2025-10-08 21:07:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 21:07:17] Running /usr/bin/apptainer --version
[2025-10-08 21:07:17] apptainer version 1.4.3-1.el9
[2025-10-08 21:07:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 21:07:18] c7-4-30.aglt2.org
[2025-10-08 21:07:18] apptainer works
[2025-10-08 21:07:18] Set ATHENA_PROC_NUMBER=8
[2025-10-08 21:07:18] Set ATHENA_CORE_NUMBER=8
[2025-10-08 21:07:18] Starting ATLAS job with PandaID=6826164019
[2025-10-08 21:07:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 01:26:18]  *** The last 200 lines of the pilot log: ***
[2025-10-09 01:26:18] 2025-10-09 05:25:18,681 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 01:26:18] 2025-10-09 05:25:18,689 | INFO     | fitting pss+swap vs Time
[2025-10-09 01:26:18] 2025-10-09 05:25:18,689 | INFO     | sum of square deviations: 4962266384.222204
[2025-10-09 01:26:18] 2025-10-09 05:25:18,691 | INFO     | sum of deviations: 37534980528.55554
[2025-10-09 01:26:18] 2025-10-09 05:25:18,691 | INFO     | mean x: 1759979776.5555556
[2025-10-09 01:26:18] 2025-10-09 05:25:18,691 | INFO     | mean y: 2240755.746031746
[2025-10-09 01:26:18] 2025-10-09 05:25:18,691 | INFO     | -- intersect: -13310387291.331055
[2025-10-09 01:26:18] 2025-10-09 05:25:18,691 | INFO     | intersect: -13310387291.331055
[2025-10-09 01:26:18] 2025-10-09 05:25:18,692 | INFO     | chi2: 3.092659651357782
[2025-10-09 01:26:18] 2025-10-09 05:25:18,692 | INFO     | sum of square deviations: 4672721039.2064495
[2025-10-09 01:26:18] 2025-10-09 05:25:18,698 | INFO     | sum of deviations: 66185934544.10119
[2025-10-09 01:26:18] 2025-10-09 05:25:18,698 | INFO     | mean x: 1759979624.0566802
[2025-10-09 01:26:18] 2025-10-09 05:25:18,698 | INFO     | mean y: 2255662.6356275305
[2025-10-09 01:26:18] 2025-10-09 05:25:18,698 | INFO     | -- intersect: -24926665884.230267
[2025-10-09 01:26:18] 2025-10-09 05:25:18,698 | INFO     | intersect: -24926665884.230267
[2025-10-09 01:26:18] 2025-10-09 05:25:18,698 | INFO     | chi2: 1.6859429288642922
[2025-10-09 01:26:18] 2025-10-09 05:25:18,698 | INFO     | current chi2=1.6859429288642922 (change=45.485662215559145 %)
[2025-10-09 01:26:18] 2025-10-09 05:25:18,699 | INFO     | sum of square deviations: 4394649335.80167
[2025-10-09 01:26:18] 2025-10-09 05:25:18,700 | INFO     | sum of deviations: 63876403215.5785
[2025-10-09 01:26:18] 2025-10-09 05:25:18,700 | INFO     | mean x: 1759979471.553719
[2025-10-09 01:26:18] 2025-10-09 05:25:18,700 | INFO     | mean y: 2254396.3016528925
[2025-10-09 01:26:18] 2025-10-09 05:25:18,700 | INFO     | -- intersect: -25579117355.08026
[2025-10-09 01:26:18] 2025-10-09 05:25:18,700 | INFO     | intersect: -25579117355.08026
[2025-10-09 01:26:18] 2025-10-09 05:25:18,701 | INFO     | chi2: 1.6860346687003238
[2025-10-09 01:26:18] 2025-10-09 05:25:18,701 | INFO     | current chi2=1.6860346687003238 (change=-0.00544145560688768 %)
[2025-10-09 01:26:18] 2025-10-09 05:25:18,701 | INFO     | right removable region: 241
[2025-10-09 01:26:18] 2025-10-09 05:25:18,705 | INFO     | sum of square deviations: 4672712499.2064495
[2025-10-09 01:26:18] 2025-10-09 05:25:18,707 | INFO     | sum of deviations: -3622916963.550602
[2025-10-09 01:26:18] 2025-10-09 05:25:18,707 | INFO     | mean x: 1759979929.0566802
[2025-10-09 01:26:18] 2025-10-09 05:25:18,707 | INFO     | mean y: 2262293.1821862347
[2025-10-09 01:26:18] 2025-10-09 05:25:18,707 | INFO     | -- intersect: 1366836112.2585557
[2025-10-09 01:26:18] 2025-10-09 05:25:18,707 | INFO     | intersect: 1366836112.2585557
[2025-10-09 01:26:18] 2025-10-09 05:25:18,707 | INFO     | chi2: 1.5128914843717474
[2025-10-09 01:26:18] 2025-10-09 05:25:18,707 | INFO     | current chi2=1.5128914843717474 (change=51.08121633405289 %)
[2025-10-09 01:26:18] 2025-10-09 05:25:18,707 | INFO     | sum of square deviations: 4394647201.6901
[2025-10-09 01:26:18] 2025-10-09 05:25:18,713 | INFO     | sum of deviations: -10949030858.479359
[2025-10-09 01:26:18] 2025-10-09 05:25:18,713 | INFO     | mean x: 1759980081.5578513
[2025-10-09 01:26:18] 2025-10-09 05:25:18,713 | INFO     | mean y: 2266296.4628099175
[2025-10-09 01:26:18] 2025-10-09 05:25:18,713 | INFO     | -- intersect: 4387163499.559117
[2025-10-09 01:26:18] 2025-10-09 05:25:18,713 | INFO     | intersect: 4387163499.559117
[2025-10-09 01:26:18] 2025-10-09 05:25:18,714 | INFO     | chi2: 1.469982744591164
[2025-10-09 01:26:18] 2025-10-09 05:25:18,714 | INFO     | current chi2=1.469982744591164 (change=2.8362073700482195 %)
[2025-10-09 01:26:18] 2025-10-09 05:25:18,714 | INFO     | left removable region: 20
[2025-10-09 01:26:18] 2025-10-09 05:25:18,714 | INFO     | sum of square deviations: 3346984858.235294
[2025-10-09 01:26:18] 2025-10-09 05:25:18,715 | INFO     | sum of deviations: 10646138276.470583
[2025-10-09 01:26:18] 2025-10-09 05:25:18,715 | INFO     | mean x: 1759980051.0588236
[2025-10-09 01:26:18] 2025-10-09 05:25:18,715 | INFO     | mean y: 2285143.040723982
[2025-10-09 01:26:18] 2025-10-09 05:25:18,716 | INFO     | -- intersect: -5595885085.097422
[2025-10-09 01:26:18] 2025-10-09 05:25:18,716 | INFO     | intersect: -5595885085.097422
[2025-10-09 01:26:18] 2025-10-09 05:25:18,716 | INFO     | chi2: 0.033002031525134895
[2025-10-09 01:26:18] 2025-10-09 05:25:18,716 | INFO     | -- intersect: -5595885085.097422
[2025-10-09 01:26:18] 2025-10-09 05:25:18,716 | INFO     | current memory leak: 3.18 B/s (using 221 data points, chi2=0.03)
[2025-10-09 01:26:18] 2025-10-09 05:25:18,717 | INFO     | could have reported an average CPU frequency of 3008 MHz (12 samples)
[2025-10-09 01:26:18] 2025-10-09 05:25:18,717 | INFO     | ..............................
[2025-10-09 01:26:18] 2025-10-09 05:25:18,717 | INFO     | . Timing measurements:
[2025-10-09 01:26:18] 2025-10-09 05:25:18,720 | INFO     | . get job = 0 s
[2025-10-09 01:26:18] 2025-10-09 05:25:18,720 | INFO     | . initial setup = 3 s
[2025-10-09 01:26:18] 2025-10-09 05:25:18,720 | INFO     | . payload setup = 13 s
[2025-10-09 01:26:18] 2025-10-09 05:25:18,720 | INFO     | . stage-in = 0 s
[2025-10-09 01:26:18] 2025-10-09 05:25:18,720 | INFO     | . payload execution = 15381 s
[2025-10-09 01:26:18] 2025-10-09 05:25:18,720 | INFO     | . stage-out = 3 s
[2025-10-09 01:26:18] 2025-10-09 05:25:18,720 | INFO     | . log creation = 0 s
[2025-10-09 01:26:18] 2025-10-09 05:25:18,720 | INFO     | ..............................
[2025-10-09 01:26:18] 2025-10-09 05:25:18,951 | INFO     | 
[2025-10-09 01:26:18] 2025-10-09 05:25:18,951 | INFO     | job summary report
[2025-10-09 01:26:18] 2025-10-09 05:25:18,951 | INFO     | --------------------------------------------------
[2025-10-09 01:26:18] 2025-10-09 05:25:18,951 | INFO     | PanDA job id: 6826164019
[2025-10-09 01:26:18] 2025-10-09 05:25:18,952 | INFO     | task id: 46373048
[2025-10-09 01:26:18] 2025-10-09 05:25:18,952 | INFO     | errors: (none)
[2025-10-09 01:26:18] 2025-10-09 05:25:18,952 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 01:26:18] 2025-10-09 05:25:18,952 | INFO     | pilot state: finished 
[2025-10-09 01:26:18] 2025-10-09 05:25:18,952 | INFO     | transexitcode: 0
[2025-10-09 01:26:18] 2025-10-09 05:25:18,952 | INFO     | exeerrorcode: 0
[2025-10-09 01:26:18] 2025-10-09 05:25:18,952 | INFO     | exeerrordiag: 
[2025-10-09 01:26:18] 2025-10-09 05:25:18,952 | INFO     | exitcode: 0
[2025-10-09 01:26:18] 2025-10-09 05:25:18,952 | INFO     | exitmsg: OK
[2025-10-09 01:26:18] 2025-10-09 05:25:18,952 | INFO     | cpuconsumptiontime: 43901 s
[2025-10-09 01:26:18] 2025-10-09 05:25:18,952 | INFO     | nevents: 400
[2025-10-09 01:26:18] 2025-10-09 05:25:18,952 | INFO     | neventsw: 0
[2025-10-09 01:26:18] 2025-10-09 05:25:18,952 | INFO     | pid: 712917
[2025-10-09 01:26:18] 2025-10-09 05:25:18,953 | INFO     | pgrp: 712917
[2025-10-09 01:26:18] 2025-10-09 05:25:18,953 | INFO     | corecount: 8
[2025-10-09 01:26:18] 2025-10-09 05:25:18,953 | INFO     | event service: False
[2025-10-09 01:26:18] 2025-10-09 05:25:18,953 | INFO     | sizes: {0: 2348839, 1: 2348839, 11: 2348867, 12: 2349157, 22: 2349185, 15399: 2380345, 15400: 2380472, 15404: 2389526, 15406: 2389582, 15423: 2389776}
[2025-10-09 01:26:18] 2025-10-09 05:25:18,953 | INFO     | --------------------------------------------------
[2025-10-09 01:26:18] 2025-10-09 05:25:18,953 | INFO     | 
[2025-10-09 01:26:18] 2025-10-09 05:25:18,953 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-09 01:26:18] 2025-10-09 05:25:19,092 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,092 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,093 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,093 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,093 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,093 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,093 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,093 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,093 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,093 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,093 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,093 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,093 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,093 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,093 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,093 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,094 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 01:26:18] 2025-10-09 05:25:19,094 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,094 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 01:26:18] 2025-10-09 05:25:19,094 | INFO     | job 6826164019 has completed (purged errors)
[2025-10-09 01:26:18] 2025-10-09 05:25:19,094 | INFO     | overall cleanup function is called
[2025-10-09 01:26:18] 2025-10-09 05:25:20,127 | INFO     | --- collectZombieJob: --- 10, [712917]
[2025-10-09 01:26:18] 2025-10-09 05:25:20,127 | INFO     | zombie collector waiting for pid 712917
[2025-10-09 01:26:18] 2025-10-09 05:25:20,127 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 01:26:18] 2025-10-09 05:25:20,127 | INFO     | collected zombie processes
[2025-10-09 01:26:18] 2025-10-09 05:25:20,127 | INFO     | will attempt to kill all subprocesses of pid=712917
[2025-10-09 01:26:18] 2025-10-09 05:25:21,387 | INFO     | process IDs to be killed: [712917] (in reverse order)
[2025-10-09 01:26:18] 2025-10-09 05:25:21,545 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 01:26:18] 2025-10-09 05:25:21,546 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 01:26:18] 2025-10-09 05:25:21,568 | INFO     | did not find any defunct processes belonging to 712917
[2025-10-09 01:26:18] 2025-10-09 05:25:21,590 | INFO     | did not find any defunct processes belonging to 712917
[2025-10-09 01:26:18] 2025-10-09 05:25:21,590 | INFO     | ready for new job
[2025-10-09 01:26:18] 2025-10-09 05:25:21,590 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 01:26:18] 2025-10-09 05:25:21,593 | INFO     | ***************************************
[2025-10-09 01:26:18] 2025-10-09 05:25:21,593 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 01:26:18] 2025-10-09 05:25:21,594 | INFO     | ***************************************
[2025-10-09 01:26:18] 2025-10-09 05:25:21,594 | INFO     | 
[2025-10-09 01:26:18] 2025-10-09 05:25:21,647 | INFO     | architecture information:
[2025-10-09 01:26:18] 2025-10-09 05:25:21,670 | INFO     | executing command: cat /etc/os-release
[2025-10-09 01:26:18] 2025-10-09 05:25:21,707 | INFO     | cat /etc/os-release:
[2025-10-09 01:26:18] NAME="CentOS Linux"
[2025-10-09 01:26:18] VERSION="7 (Core)"
[2025-10-09 01:26:18] ID="centos"
[2025-10-09 01:26:18] ID_LIKE="rhel fedora"
[2025-10-09 01:26:18] VERSION_ID="7"
[2025-10-09 01:26:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 01:26:18] ANSI_COLOR="0;31"
[2025-10-09 01:26:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 01:26:18] HOME_URL="https://www.centos.org/"
[2025-10-09 01:26:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 01:26:18] 
[2025-10-09 01:26:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 01:26:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 01:26:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 01:26:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 01:26:18] 
[2025-10-09 01:26:18] 2025-10-09 05:25:21,707 | INFO     | ***************************************
[2025-10-09 01:26:18] 2025-10-09 05:25:22,212 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-09 01:26:18] 2025-10-09 05:25:22,276 | INFO     | sufficient remaining disk space (128147521536 B)
[2025-10-09 01:26:18] 2025-10-09 05:25:22,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 01:26:18] 2025-10-09 05:25:22,280 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 01:26:18] 2025-10-09 05:25:22,280 | INFO     | update_server=False
[2025-10-09 01:26:18] 2025-10-09 05:25:22,280 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 01:26:18] 2025-10-09 05:25:22,280 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 01:26:18] 2025-10-09 05:25:22,311 | INFO     | all data control threads have been joined
[2025-10-09 01:26:18] 2025-10-09 05:25:22,342 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 01:26:18] 2025-10-09 05:25:22,342 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 01:26:18] 2025-10-09 05:25:22,342 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 01:26:18] 2025-10-09 05:25:22,342 | INFO     | will abort loop
[2025-10-09 01:26:18] 2025-10-09 05:25:23,002 | INFO     | all payload control threads have been joined
[2025-10-09 01:26:18] 2025-10-09 05:25:23,285 | INFO     | [job] retrieve thread has finished
[2025-10-09 01:26:18] 2025-10-09 05:25:23,333 | INFO     | [data] control thread has finished
[2025-10-09 01:26:18] 2025-10-09 05:25:23,344 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 01:26:18] 2025-10-09 05:25:23,348 | INFO     | [job] job monitor thread has finished
[2025-10-09 01:26:18] 2025-10-09 05:25:23,402 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 01:26:18] 2025-10-09 05:25:23,537 | INFO     | all job control threads have been joined
[2025-10-09 01:26:18] 2025-10-09 05:25:23,636 | INFO     | [payload] failed_post thread has finished
[2025-10-09 01:26:18] 2025-10-09 05:25:23,837 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 01:26:18] 2025-10-09 05:25:23,838 | INFO     | [job] validate thread has finished
[2025-10-09 01:26:18] 2025-10-09 05:25:23,979 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 01:26:18] 2025-10-09 05:25:24,010 | INFO     | [payload] control thread has finished
[2025-10-09 01:26:18] 2025-10-09 05:25:24,334 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 01:26:18] 2025-10-09 05:25:24,357 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 01:26:18] 2025-10-09 05:25:24,358 | INFO     | [data] copytool_in thread has finished
[2025-10-09 01:26:18] 2025-10-09 05:25:24,432 | INFO     | [payload] validate_post thread has finished
[2025-10-09 01:26:18] 2025-10-09 05:25:24,544 | INFO     | [job] control thread has finished
[2025-10-09 01:26:18] 2025-10-09 05:25:24,985 | INFO     | [job] queue monitor thread has finished
[2025-10-09 01:26:18] 2025-10-09 05:25:25,419 | INFO     | [data] copytool_out thread has finished
[2025-10-09 01:26:18] 2025-10-09 05:25:26,291 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 01:26:18] 2025-10-09 05:25:52,669 | INFO     | PID=684397 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 01:26:18] 2025-10-09 05:25:52,669 | INFO     | .. there are 27 such processes running
[2025-10-09 01:26:18] 2025-10-09 05:25:52,670 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 01:26:18] 2025-10-09 05:25:52,670 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 01:26:18] 2025-10-09 05:25:52,670 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 01:26:18] 2025-10-09 05:26:10,421 | INFO     | [monitor] cgroup control has ended
[2025-10-09 01:26:18] 2025-10-09 05:26:11,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350845486912)>', '<ExcThread(monitor, started 140350119204608)>']
[2025-10-09 01:26:18] 2025-10-09 05:26:12,828 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 01:26:18] 2025-10-09 05:26:12,828 | INFO     | [monitor] control thread has ended
[2025-10-09 01:26:18] 2025-10-09 05:26:16,862 | INFO     | all workflow threads have been joined
[2025-10-09 01:26:18] 2025-10-09 05:26:16,864 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 01:26:18] 2025-10-09 05:26:16,865 | INFO     | traces error code: 0
[2025-10-09 01:26:18] 2025-10-09 05:26:16,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 01:26:18] 2025-10-09 05:26:17,896 [wrapper] ==== pilot stdout END ====
[2025-10-09 01:26:18] 2025-10-09 05:26:17,899 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 01:26:18] 2025-10-09 05:26:17,902 [wrapper] pilotpid: 684397
[2025-10-09 01:26:18] 2025-10-09 05:26:17,913 [wrapper] Pilot exit status: 0
[2025-10-09 01:26:18] 2025-10-09 05:26:18,097 [wrapper] pandaids: 6826164019
[2025-10-09 01:26:18] 2025-10-09 05:26:18,255 [wrapper] cleanup supervisor_pilot 1711023 684398
[2025-10-09 01:26:18] 2025-10-09 05:26:18,278 [wrapper] Test setup, not cleaning
[2025-10-09 01:26:18] 2025-10-09 05:26:18,286 [wrapper] apfmon messages muted
[2025-10-09 01:26:18] 2025-10-09 05:26:18,290 [wrapper] ==== wrapper stdout END ====
[2025-10-09 01:26:18] 2025-10-09 05:26:18,297 [wrapper] ==== wrapper stderr END ====
[2025-10-09 01:26:18]  *** Error codes and diagnostics ***
[2025-10-09 01:26:18]     "exeErrorCode": 0,
[2025-10-09 01:26:18]     "exeErrorDiag": "",
[2025-10-09 01:26:18]     "pilotErrorCode": 0,
[2025-10-09 01:26:18]     "pilotErrorDiag": "",
[2025-10-09 01:26:18]  *** Listing of results directory ***
[2025-10-09 01:26:18] total 409660
[2025-10-09 01:26:18] -rw-r--r--. 1 boincer umatlas    552446 Sep 30 15:42 pilot3.tar.gz
[2025-10-09 01:26:18] -rwx------. 1 boincer umatlas     36292 Sep 30 15:54 runpilot2-wrapper.sh
[2025-10-09 01:26:18] -rw-r--r--. 1 boincer umatlas      5112 Sep 30 15:54 queuedata.json
[2025-10-09 01:26:18] -rw-r--r--. 1 boincer umatlas       100 Oct  8 21:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 01:26:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 21:07 run_atlas
[2025-10-09 01:26:18] -rw-r--r--. 1 boincer umatlas       105 Oct  8 21:07 job.xml
[2025-10-09 01:26:18] -rw-r--r--. 2 boincer umatlas 219132028 Oct  8 21:07 EVNT.46373045._002290.pool.root.1
[2025-10-09 01:26:18] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 21:07 start_atlas.sh
[2025-10-09 01:26:18] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 21:07 shared
[2025-10-09 01:26:18] -rw-r--r--. 2 boincer umatlas    565603 Oct  8 21:07 input.tar.gz
[2025-10-09 01:26:18] -rw-r--r--. 1 boincer umatlas         0 Oct  8 21:07 boinc_lockfile
[2025-10-09 01:26:18] -rw-r--r--. 1 boincer umatlas      2537 Oct  8 21:07 pandaJob.out
[2025-10-09 01:26:18] -rw-------. 1 boincer umatlas    979298 Oct  8 21:07 agis_schedconf.cvmfs.json
[2025-10-09 01:26:18] drwx------. 4 boincer umatlas      4096 Oct  8 21:07 pilot3
[2025-10-09 01:26:18] -rw-r--r--. 1 boincer umatlas      6938 Oct  9 01:19 init_data.xml
[2025-10-09 01:26:18] -rw-------. 1 boincer umatlas 191632304 Oct  9 01:22 HITS.46373048._069972.pool.root.1
[2025-10-09 01:26:18] -rw-r--r--. 1 boincer umatlas       530 Oct  9 01:22 boinc_task_state.xml
[2025-10-09 01:26:18] -rw-------. 1 boincer umatlas      1058 Oct  9 01:24 memory_monitor_summary.json
[2025-10-09 01:26:18] -rw-------. 1 boincer umatlas   1560401 Oct  9 01:24 agis_ddmendpoints.agis.ALL.json
[2025-10-09 01:26:18] -rw-------. 1 boincer umatlas    456437 Oct  9 01:24 log.46373048._069972.job.log.tgz.1
[2025-10-09 01:26:18] -rw-------. 1 boincer umatlas      7789 Oct  9 01:25 heartbeat.json
[2025-10-09 01:26:18] -rw-------. 1 boincer umatlas        95 Oct  9 01:25 pilot_heartbeat.json
[2025-10-09 01:26:18] -rw-r--r--. 1 boincer umatlas        28 Oct  9 01:26 wrapper_checkpoint.txt
[2025-10-09 01:26:18] -rw-------. 1 boincer umatlas      5010 Oct  9 01:26 pilotlog.txt
[2025-10-09 01:26:18] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 01:26 boinc_mmap_file
[2025-10-09 01:26:18] -rw-------. 1 boincer umatlas   1958569 Oct  9 01:26 log.46373048._069972.job.log.1
[2025-10-09 01:26:18] -rw-------. 1 boincer umatlas       357 Oct  9 01:26 output.list
[2025-10-09 01:26:18] -rw-r--r--. 1 boincer umatlas       620 Oct  9 01:26 runtime_log
[2025-10-09 01:26:18] -rw-------. 1 boincer umatlas   2437120 Oct  9 01:26 result.tar.gz
[2025-10-09 01:26:18] -rw-r--r--. 1 boincer umatlas      8699 Oct  9 01:26 runtime_log.err
[2025-10-09 01:26:18] -rw-------. 1 boincer umatlas       657 Oct  9 01:26 2UWNDmnbvN8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvm9MDmhgu0Ym.diag
[2025-10-09 01:26:18] -rw-r--r--. 1 boincer umatlas     21039 Oct  9 01:26 stderr.txt
[2025-10-09 01:26:18] HITS file was successfully produced:
[2025-10-09 01:26:18] -rw-------. 1 boincer umatlas 191632304 Oct  9 01:22 shared/HITS.pool.root.1
[2025-10-09 01:26:18]  *** Contents of shared directory: ***
[2025-10-09 01:26:18] total 404100
[2025-10-09 01:26:18] -rw-r--r--. 2 boincer umatlas 219132028 Oct  8 21:07 ATLAS.root_0
[2025-10-09 01:26:18] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 21:07 start_atlas.sh
[2025-10-09 01:26:18] -rw-r--r--. 2 boincer umatlas    565603 Oct  8 21:07 input.tar.gz
[2025-10-09 01:26:18] -rw-------. 1 boincer umatlas 191632304 Oct  9 01:22 HITS.pool.root.1
[2025-10-09 01:26:18] -rw-------. 1 boincer umatlas   2437120 Oct  9 01:26 result.tar.gz
01:26:20 (665242): run_atlas exited; CPU time 44448.795762
01:26:20 (665242): called boinc_finish(0)

</stderr_txt>
]]>

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