Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:28:41 (3298758): wrapper (7.7.26015): starting
18:28:41 (3298758): wrapper: running run_atlas (--nthreads 12)
[2025-10-08 18:28:41] Arguments: --nthreads 12
[2025-10-08 18:28:41] Threads: 12
[2025-10-08 18:28:41] Checking for CVMFS
[2025-10-08 18:28:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 18:28:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 18:28:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 18:28:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 18:28:42] 2.11.5.0 3543 26475 193560 151491 2 204 23087508 45568000 19182 130560 0 252651246 99.854 117089099 23506 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-08 18:28:42] CVMFS is ok
[2025-10-08 18:28:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 18:28:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 18:28:42] Further information can be found at the LHC@home message board.
[2025-10-08 18:28:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 18:28:42] Checking for apptainer binary...
[2025-10-08 18:28:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 18:28:42] Running /usr/bin/apptainer --version
[2025-10-08 18:28:42] apptainer version 1.4.1-1.el9
[2025-10-08 18:28:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 18:28:43] wns0094.triumf.lcg
[2025-10-08 18:28:43] apptainer works
[2025-10-08 18:28:43] Set ATHENA_PROC_NUMBER=12
[2025-10-08 18:28:43] Set ATHENA_CORE_NUMBER=12
[2025-10-08 18:28:43] Starting ATLAS job with PandaID=6836602352
[2025-10-08 18:28:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 18:34:18]  *** The last 200 lines of the pilot log: ***
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | WARNING  | wrong length of table data, x=[1759973433.0], y=[1364.0] (must be same and length>=4)
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | could have reported an average CPU frequency of 2576 MHz (4 samples)
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | ..............................
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . Timing measurements:
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . get job = 0 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . initial setup = 3 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . payload setup = 19 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . stage-in = 0 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . payload execution = 45 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . stage-out = 1 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . log creation = 0 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | ..............................
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-08 18:34:19] 2025-10-09 01:33:20,491 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6836602352/pilotlog.txt
[2025-10-08 18:34:19] 2025-10-09 01:33:20,608 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-08 18:34:19] - Log from pilotlog.txt -
[2025-10-08 18:34:19] 2025-10-09 01:33:20,456 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6836602352/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 18:34:19] 2025-10-09 01:33:20,488 | INFO     | extracted standard info from prmon json
[2025-10-08 18:34:19] 2025-10-09 01:33:20,488 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 18:34:19] 2025-10-09 01:33:20,488 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 18:34:19] 2025-10-09 01:33:20,489 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 18:34:19] 2025-10-09 01:33:20,489 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | WARNING  | wrong length of table data, x=[1759973433.0], y=[1364.0] (must be same and length>=4)
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | could have reported an average CPU frequency of 2576 MHz (4 samples)
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | ..............................
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . Timing measurements:
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . get job = 0 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . initial setup = 3 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . payload setup = 19 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . stage-in = 0 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . payload execution = 45 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . stage-out = 1 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . log creation = 0 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | ..............................
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-08 18:34:19] 2025-10-09 01:33:20,491 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6836602352/pilotlog.txt
[2025-10-08 18:34:19] 2025-10-09 01:33:20,609 | WARNING  | 
[2025-10-08 18:34:19] [begin log extracts]
[2025-10-08 18:34:19] - Log from pilotlog.txt -
[2025-10-08 18:34:19] 2025-10-09 01:33:20,456 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6836602352/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 18:34:19] 2025-10-09 01:33:20,488 | INFO     | extracted standard info from prmon json
[2025-10-08 18:34:19] 2025-10-09 01:33:20,488 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 18:34:19] 2025-10-09 01:33:20,488 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 18:34:19] 2025-10-09 01:33:20,489 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 18:34:19] 2025-10-09 01:33:20,489 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | WARNING  | wrong length of table data, x=[1759973433.0], y=[1364.0] (must be same and length>=4)
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | could have reported an average CPU frequency of 2576 MHz (4 samples)
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | ..............................
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . Timing measurements:
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . get job = 0 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . initial setup = 3 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . payload setup = 19 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . stage-in = 0 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . payload execution = 45 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . stage-out = 1 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | . log creation = 0 s
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | ..............................
[2025-10-08 18:34:19] 2025-10-09 01:33:20,490 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-08 18:34:19] 2025-10-09 01:33:20,491 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6836602352/pilotlog.txt
[2025-10-08 18:34:19] [end log extracts]
[2025-10-08 18:34:19] 2025-10-09 01:33:20,609 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-08 18:34:19] 2025-10-09 01:33:20,610 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-08 18:34:19] 2025-10-09 01:33:21,155 | INFO     | 
[2025-10-08 18:34:19] 2025-10-09 01:33:21,155 | INFO     | job summary report
[2025-10-08 18:34:19] 2025-10-09 01:33:21,155 | INFO     | --------------------------------------------------
[2025-10-08 18:34:19] 2025-10-09 01:33:21,155 | INFO     | PanDA job id: 6836602352
[2025-10-08 18:34:19] 2025-10-09 01:33:21,155 | INFO     | task id: 46676269
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-08 18:30:56,011 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | pilot state: failed 
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | transexitcode: 65
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | exeerrorcode: 65
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | exitcode: 65
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | cpuconsumptiontime: 18 s
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | nevents: 0
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | neventsw: 0
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | pid: 3313808
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | pgrp: 3313808
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | corecount: 12
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | event service: False
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | sizes: {0: 2348024, 1: 2348877, 12: 2348877, 16: 2349167, 23: 2349195, 69: 2372666, 70: 2372770, 71: 2377118, 205: 2377256}
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | --------------------------------------------------
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | 
[2025-10-08 18:34:19] 2025-10-09 01:33:21,156 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-08 18:34:19] 2025-10-09 01:33:21,198 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,199 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,199 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,199 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,199 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,199 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,199 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,199 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,199 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,199 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,199 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,199 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,199 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,199 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,199 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,200 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,200 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,200 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 18:34:19] 2025-10-09 01:33:21,200 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,200 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 18:34:19] 2025-10-09 01:33:21,200 | INFO     | job 6836602352 has completed (purged errors)
[2025-10-08 18:34:19] 2025-10-09 01:33:21,200 | INFO     | overall cleanup function is called
[2025-10-08 18:34:19] 2025-10-09 01:33:22,216 | INFO     | --- collectZombieJob: --- 10, [3313808]
[2025-10-08 18:34:19] 2025-10-09 01:33:22,216 | INFO     | zombie collector waiting for pid 3313808
[2025-10-08 18:34:19] 2025-10-09 01:33:22,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 18:34:19] 2025-10-09 01:33:22,216 | INFO     | collected zombie processes
[2025-10-08 18:34:19] 2025-10-09 01:33:22,217 | INFO     | will attempt to kill all subprocesses of pid=3313808
[2025-10-08 18:34:19] 2025-10-09 01:33:22,672 | INFO     | process IDs to be killed: [3313808] (in reverse order)
[2025-10-08 18:34:19] 2025-10-09 01:33:22,854 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 18:34:19] 2025-10-09 01:33:22,854 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 18:34:19] 2025-10-09 01:33:22,863 | INFO     | did not find any defunct processes belonging to 3313808
[2025-10-08 18:34:19] 2025-10-09 01:33:22,871 | INFO     | did not find any defunct processes belonging to 3313808
[2025-10-08 18:34:19] 2025-10-09 01:33:22,871 | INFO     | ready for new job
[2025-10-08 18:34:19] 2025-10-09 01:33:22,871 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 18:34:19] 2025-10-09 01:33:22,873 | INFO     | ***************************************
[2025-10-08 18:34:19] 2025-10-09 01:33:22,873 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 18:34:19] 2025-10-09 01:33:22,873 | INFO     | ***************************************
[2025-10-08 18:34:19] 2025-10-09 01:33:22,873 | INFO     | 
[2025-10-08 18:34:19] 2025-10-09 01:33:22,875 | INFO     | architecture information:
[2025-10-08 18:34:19] 2025-10-09 01:33:22,875 | INFO     | executing command: cat /etc/os-release
[2025-10-08 18:34:19] 2025-10-09 01:33:22,890 | INFO     | cat /etc/os-release:
[2025-10-08 18:34:19] NAME="CentOS Linux"
[2025-10-08 18:34:19] VERSION="7 (Core)"
[2025-10-08 18:34:19] ID="centos"
[2025-10-08 18:34:19] ID_LIKE="rhel fedora"
[2025-10-08 18:34:19] VERSION_ID="7"
[2025-10-08 18:34:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 18:34:19] ANSI_COLOR="0;31"
[2025-10-08 18:34:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 18:34:19] HOME_URL="https://www.centos.org/"
[2025-10-08 18:34:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 18:34:19] 
[2025-10-08 18:34:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 18:34:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 18:34:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 18:34:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 18:34:19] 
[2025-10-08 18:34:19] 2025-10-09 01:33:22,891 | INFO     | ***************************************
[2025-10-08 18:34:19] 2025-10-09 01:33:23,394 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-08 18:34:19] 2025-10-09 01:33:23,505 | INFO     | sufficient remaining disk space (1907370229760 B)
[2025-10-08 18:34:19] 2025-10-09 01:33:23,506 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 18:34:19] 2025-10-09 01:33:23,506 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 18:34:19] 2025-10-09 01:33:23,506 | INFO     | update_server=False
[2025-10-08 18:34:19] 2025-10-09 01:33:23,506 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 18:34:19] 2025-10-09 01:33:23,507 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 18:34:19] 2025-10-09 01:33:23,921 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-08 18:34:19] 2025-10-09 01:33:23,921 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-08 18:34:19] 2025-10-09 01:33:23,921 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 18:34:19] 2025-10-09 01:33:23,921 | INFO     | will abort loop
[2025-10-08 18:34:19] 2025-10-09 01:33:24,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 18:34:19] 2025-10-09 01:33:24,123 | INFO     | all job control threads have been joined
[2025-10-08 18:34:19] 2025-10-09 01:33:24,429 | INFO     | all data control threads have been joined
[2025-10-08 18:34:19] 2025-10-09 01:33:24,512 | INFO     | [job] retrieve thread has finished
[2025-10-08 18:34:19] 2025-10-09 01:33:24,575 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 18:34:19] 2025-10-09 01:33:24,582 | INFO     | [data] copytool_in thread has finished
[2025-10-08 18:34:19] 2025-10-09 01:33:24,734 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 18:34:19] 2025-10-09 01:33:24,898 | INFO     | all payload control threads have been joined
[2025-10-08 18:34:19] 2025-10-09 01:33:24,910 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 18:34:19] 2025-10-09 01:33:24,926 | INFO     | [job] job monitor thread has finished
[2025-10-08 18:34:19] 2025-10-09 01:33:25,129 | INFO     | [job] control thread has finished
[2025-10-08 18:34:19] 2025-10-09 01:33:25,134 | INFO     | [payload] failed_post thread has finished
[2025-10-08 18:34:19] 2025-10-09 01:33:25,159 | INFO     | [payload] validate_post thread has finished
[2025-10-08 18:34:19] 2025-10-09 01:33:25,435 | INFO     | [data] control thread has finished
[2025-10-08 18:34:19] 2025-10-09 01:33:25,514 | INFO     | [data] copytool_out thread has finished
[2025-10-08 18:34:19] 2025-10-09 01:33:25,613 | INFO     | [job] validate thread has finished
[2025-10-08 18:34:19] 2025-10-09 01:33:25,904 | INFO     | [payload] control thread has finished
[2025-10-08 18:34:19] 2025-10-09 01:33:25,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 18:34:19] 2025-10-09 01:33:25,951 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 18:34:19] 2025-10-09 01:33:26,938 | INFO     | [job] queue monitor thread has finished
[2025-10-08 18:34:19] 2025-10-09 01:33:28,070 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 18:34:19] 2025-10-09 01:33:52,105 | INFO     | 253s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-08 18:34:19] 2025-10-09 01:33:54,221 | INFO     | PID=3305054 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 18:34:19] 2025-10-09 01:33:54,221 | INFO     | .. there are 28 such processes running
[2025-10-08 18:34:19] 2025-10-09 01:33:54,221 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 18:34:19] 2025-10-09 01:33:54,221 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 18:34:19] 2025-10-09 01:33:54,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 18:34:19] 2025-10-09 01:34:11,635 | INFO     | [monitor] cgroup control has ended
[2025-10-08 18:34:19] 2025-10-09 01:34:12,403 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140551872522048)>', '<ExcThread(monitor, started 140551552734976)>']
[2025-10-08 18:34:19] 2025-10-09 01:34:13,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 18:34:19] 2025-10-09 01:34:13,338 | INFO     | [monitor] control thread has ended
[2025-10-08 18:34:19] 2025-10-09 01:34:17,429 | INFO     | all workflow threads have been joined
[2025-10-08 18:34:19] 2025-10-09 01:34:17,429 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 18:34:19] 2025-10-09 01:34:17,430 | INFO     | traces error code: 0
[2025-10-08 18:34:19] 2025-10-09 01:34:17,430 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 18:34:19] 2025-10-09 01:34:17,818 [wrapper] ==== pilot stdout END ====
[2025-10-08 18:34:19] 2025-10-09 01:34:17,820 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 18:34:19] 2025-10-09 01:34:17,822 [wrapper] pilotpid: 3305054
[2025-10-08 18:34:19] 2025-10-09 01:34:17,824 [wrapper] Pilot exit status: 0
[2025-10-08 18:34:19] 2025-10-09 01:34:17,921 [wrapper] pandaids: 6836602352
[2025-10-08 18:34:19] 2025-10-09 01:34:18,166 [wrapper] cleanup supervisor_pilot 3305060 3305055
[2025-10-08 18:34:19] 2025-10-09 01:34:18,202 [wrapper] Test setup, not cleaning
[2025-10-08 18:34:19] 2025-10-09 01:34:18,237 [wrapper] apfmon messages muted
[2025-10-08 18:34:19] 2025-10-09 01:34:18,257 [wrapper] ==== wrapper stdout END ====
[2025-10-08 18:34:19] 2025-10-09 01:34:18,270 [wrapper] ==== wrapper stderr END ====
[2025-10-08 18:34:19]  *** Error codes and diagnostics ***
[2025-10-08 18:34:19]     "exeErrorCode": 65,
[2025-10-08 18:34:19]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-08 18:34:19]     "pilotErrorCode": 1305,
[2025-10-08 18:34:19]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-08 18:34:19]  *** Listing of results directory ***
[2025-10-08 18:34:19] total 218320
[2025-10-08 18:34:19] -rw-r--r--. 1 boinc boinc    557409 Oct  8 15:57 pilot3.tar.gz
[2025-10-08 18:34:19] -rw-r--r--. 1 boinc boinc      5112 Oct  8 16:01 queuedata.json
[2025-10-08 18:34:19] -rwx------. 1 boinc boinc     36292 Oct  8 16:01 runpilot2-wrapper.sh
[2025-10-08 18:34:19] -rw-r--r--. 1 boinc boinc       100 Oct  8 18:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 18:34:19] -rwxr-xr-x. 1 boinc boinc      7986 Oct  8 18:28 run_atlas
[2025-10-08 18:34:19] -rw-r--r--. 1 boinc boinc       105 Oct  8 18:28 job.xml
[2025-10-08 18:34:19] -rw-r--r--. 1 boinc boinc      6594 Oct  8 18:28 init_data.xml
[2025-10-08 18:34:19] -rw-r--r--. 2 boinc boinc 219426589 Oct  8 18:28 EVNT.46676267._000360.pool.root.1
[2025-10-08 18:34:19] -rw-r--r--. 2 boinc boinc     15120 Oct  8 18:28 start_atlas.sh
[2025-10-08 18:34:19] drwxrwx--x. 2 boinc boinc      4096 Oct  8 18:28 shared
[2025-10-08 18:34:19] -rw-r--r--. 2 boinc boinc    569679 Oct  8 18:28 input.tar.gz
[2025-10-08 18:34:19] -rw-r--r--. 1 boinc boinc         0 Oct  8 18:28 boinc_lockfile
[2025-10-08 18:34:19] -rw-r--r--. 1 boinc boinc      2548 Oct  8 18:28 pandaJob.out
[2025-10-08 18:34:19] -rw-------. 1 boinc boinc    979290 Oct  8 18:29 agis_schedconf.cvmfs.json
[2025-10-08 18:34:19] -rw-------. 1 boinc boinc   1560401 Oct  8 18:29 agis_ddmendpoints.agis.ALL.json
[2025-10-08 18:34:19] drwx------. 5 boinc boinc      4096 Oct  8 18:29 pilot3
[2025-10-08 18:34:19] -rw-r--r--. 1 boinc boinc       525 Oct  8 18:30 boinc_task_state.xml
[2025-10-08 18:34:19] -rw-------. 1 boinc boinc       965 Oct  8 18:31 memory_monitor_summary.json
[2025-10-08 18:34:19] -rw-------. 1 boinc boinc     21888 Oct  8 18:31 log.46676269._008987.job.log.tgz.1
[2025-10-08 18:34:19] -rw-------. 1 boinc boinc        95 Oct  8 18:33 pilot_heartbeat.json
[2025-10-08 18:34:19] -rw-------. 1 boinc boinc      8390 Oct  8 18:33 heartbeat.json
[2025-10-08 18:34:19] -rw-r--r--. 1 boinc boinc      8192 Oct  8 18:34 boinc_mmap_file
[2025-10-08 18:34:19] -rw-r--r--. 1 boinc boinc        23 Oct  8 18:34 wrapper_checkpoint.txt
[2025-10-08 18:34:19] -rw-------. 1 boinc boinc      5123 Oct  8 18:34 pilotlog.txt
[2025-10-08 18:34:19] -rw-------. 1 boinc boinc     93071 Oct  8 18:34 log.46676269._008987.job.log.1
[2025-10-08 18:34:19] -rw-------. 1 boinc boinc       188 Oct  8 18:34 output.list
[2025-10-08 18:34:19] -rw-r--r--. 1 boinc boinc       620 Oct  8 18:34 runtime_log
[2025-10-08 18:34:19] -rw-------. 1 boinc boinc    133120 Oct  8 18:34 result.tar.gz
[2025-10-08 18:34:19] -rw-r--r--. 1 boinc boinc      8528 Oct  8 18:34 runtime_log.err
[2025-10-08 18:34:19] -rw-------. 1 boinc boinc       644 Oct  8 18:34 bXTKDmaLsQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmrzMMDm1dyBAo.diag
[2025-10-08 18:34:19] -rw-r--r--. 1 boinc boinc     21868 Oct  8 18:34 stderr.txt
[2025-10-08 18:34:19] No HITS result produced
[2025-10-08 18:34:19]  *** Contents of shared directory: ***
[2025-10-08 18:34:19] total 214996
[2025-10-08 18:34:19] -rw-r--r--. 2 boinc boinc 219426589 Oct  8 18:28 ATLAS.root_0
[2025-10-08 18:34:19] -rw-r--r--. 2 boinc boinc     15120 Oct  8 18:28 start_atlas.sh
[2025-10-08 18:34:19] -rw-r--r--. 2 boinc boinc    569679 Oct  8 18:28 input.tar.gz
[2025-10-08 18:34:19] -rw-------. 1 boinc boinc    133120 Oct  8 18:34 result.tar.gz
18:34:20 (3298758): run_atlas exited; CPU time 28.415167
18:34:20 (3298758): called boinc_finish(0)

</stderr_txt>
]]>

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