Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:44:35 (1341896): wrapper (7.7.26015): starting
20:44:35 (1341896): wrapper: running run_atlas (--nthreads 11)
[2025-10-08 20:44:35] Arguments: --nthreads 11
[2025-10-08 20:44:35] Threads: 11
[2025-10-08 20:44:35] Checking for CVMFS
[2025-10-08 20:44:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 20:44:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 20:44:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 20:44:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 20:44:36] 2.13.2.0 317867 132974 581392 151490 3 367 37046335 40960000 15634 16776704 0 377956383 99.813 170850538 30698 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-08 20:44:36] CVMFS is ok
[2025-10-08 20:44:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 20:44:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 20:44:36] Further information can be found at the LHC@home message board.
[2025-10-08 20:44:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 20:44:36] Checking for apptainer binary...
[2025-10-08 20:44:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 20:44:36] Running /usr/bin/apptainer --version
[2025-10-08 20:44:36] apptainer version 1.4.3-1.el9
[2025-10-08 20:44:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 20:44:36] c8-6-11.aglt2.org
[2025-10-08 20:44:36] apptainer works
[2025-10-08 20:44:36] Set ATHENA_PROC_NUMBER=11
[2025-10-08 20:44:36] Set ATHENA_CORE_NUMBER=11
[2025-10-08 20:44:36] Starting ATLAS job with PandaID=6836603595
[2025-10-08 20:44:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 21:29:02]  *** The last 200 lines of the pilot log: ***
[2025-10-08 21:29:02] 2025-10-09 01:28:00,257 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 21:29:02] 2025-10-09 01:28:00,580 | INFO     | time since job start (2595s) is within the limit (172800.0s)
[2025-10-08 21:29:02] 2025-10-09 01:28:02,588 | INFO     | time since job start (2597s) is within the limit (172800.0s)
[2025-10-08 21:29:02] 2025-10-09 01:28:02,786 | INFO     | monitor loop #187: job 0:6836603595 is in state 'finished'
[2025-10-08 21:29:02] 2025-10-09 01:28:02,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 21:29:02] 2025-10-09 01:28:04,623 | INFO     | time since job start (2599s) is within the limit (172800.0s)
[2025-10-08 21:29:02] 2025-10-09 01:28:05,291 | INFO     | monitor loop #188: job 0:6836603595 is in state 'finished'
[2025-10-08 21:29:02] 2025-10-09 01:28:05,291 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 21:29:02] 2025-10-09 01:28:06,630 | INFO     | time since job start (2601s) is within the limit (172800.0s)
[2025-10-08 21:29:02] 2025-10-09 01:28:07,797 | INFO     | monitor loop #189: job 0:6836603595 is in state 'finished'
[2025-10-08 21:29:02] 2025-10-09 01:28:07,797 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 21:29:02] 2025-10-09 01:28:08,637 | INFO     | time since job start (2603s) is within the limit (172800.0s)
[2025-10-08 21:29:02] 2025-10-09 01:28:10,305 | INFO     | monitor loop #190: job 0:6836603595 is in state 'finished'
[2025-10-08 21:29:02] 2025-10-09 01:28:10,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 21:29:02] 2025-10-09 01:28:10,655 | INFO     | time since job start (2605s) is within the limit (172800.0s)
[2025-10-08 21:29:02] 2025-10-09 01:28:12,662 | INFO     | time since job start (2607s) is within the limit (172800.0s)
[2025-10-08 21:29:02] 2025-10-09 01:28:12,824 | INFO     | monitor loop #191: job 0:6836603595 is in state 'finished'
[2025-10-08 21:29:02] 2025-10-09 01:28:12,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 21:29:02] 2025-10-09 01:28:15,349 | INFO     | monitor loop #192: job 0:6836603595 is in state 'finished'
[2025-10-08 21:29:02] 2025-10-09 01:28:15,349 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 21:29:02] 2025-10-09 01:28:15,364 | INFO     | PID=1349746 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 21:29:02] 2025-10-09 01:28:15,364 | INFO     | .. there are 38 such processes running
[2025-10-08 21:29:02] 2025-10-09 01:28:16,371 | INFO     | time since job start (2611s) is within the limit (172800.0s)
[2025-10-08 21:29:02] 2025-10-09 01:28:17,875 | INFO     | monitor loop #193: job 0:6836603595 is in state 'finished'
[2025-10-08 21:29:02] 2025-10-09 01:28:17,875 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 21:29:02] 2025-10-09 01:28:18,380 | INFO     | time since job start (2613s) is within the limit (172800.0s)
[2025-10-08 21:29:02] 2025-10-09 01:28:20,380 | INFO     | monitor loop #194: job 0:6836603595 is in state 'finished'
[2025-10-08 21:29:02] 2025-10-09 01:28:20,380 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 21:29:02] 2025-10-09 01:28:20,386 | INFO     | time since job start (2615s) is within the limit (172800.0s)
[2025-10-08 21:29:02] 2025-10-09 01:28:22,397 | INFO     | time since job start (2617s) is within the limit (172800.0s)
[2025-10-08 21:29:02] 2025-10-09 01:28:22,885 | INFO     | monitor loop #195: job 0:6836603595 is in state 'finished'
[2025-10-08 21:29:02] 2025-10-09 01:28:22,885 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 21:29:02] 2025-10-09 01:28:24,404 | INFO     | time since job start (2619s) is within the limit (172800.0s)
[2025-10-08 21:29:02] 2025-10-09 01:28:25,390 | INFO     | monitor loop #196: job 0:6836603595 is in state 'finished'
[2025-10-08 21:29:02] 2025-10-09 01:28:25,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 21:29:02] 2025-10-09 01:28:26,418 | INFO     | time since job start (2621s) is within the limit (172800.0s)
[2025-10-08 21:29:02] 2025-10-09 01:28:26,948 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-08 21:29:02] 2025-10-09 01:28:26,961 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3785.425148437499
[2025-10-08 21:29:02] 2025-10-09 01:28:27,004 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6836603595/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 21:29:02] 2025-10-09 01:28:27,005 | INFO     | extracted standard info from prmon json
[2025-10-08 21:29:02] 2025-10-09 01:28:27,005 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 21:29:02] 2025-10-09 01:28:27,005 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 21:29:02] 2025-10-09 01:28:27,005 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 21:29:02] 2025-10-09 01:28:27,005 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 21:29:02] 2025-10-09 01:28:27,006 | INFO     | fitting pss+swap vs Time
[2025-10-08 21:29:02] 2025-10-09 01:28:27,006 | INFO     | sum of square deviations: 13283970.0
[2025-10-08 21:29:02] 2025-10-09 01:28:27,006 | INFO     | sum of deviations: -119485275.00000003
[2025-10-08 21:29:02] 2025-10-09 01:28:27,006 | INFO     | mean x: 1759972051.0
[2025-10-08 21:29:02] 2025-10-09 01:28:27,006 | INFO     | mean y: 2330708.6
[2025-10-08 21:29:02] 2025-10-09 01:28:27,006 | INFO     | -- intersect: 15832744696.741278
[2025-10-08 21:29:02] 2025-10-09 01:28:27,006 | INFO     | intersect: 15832744696.741278
[2025-10-08 21:29:02] 2025-10-09 01:28:27,006 | INFO     | chi2: 0.004005239611401092
[2025-10-08 21:29:02] 2025-10-09 01:28:27,006 | INFO     | -- intersect: 15832744696.741278
[2025-10-08 21:29:02] 2025-10-09 01:28:27,017 | INFO     | current memory leak: -8.99 B/s (using 35 data points, chi2=0.00)
[2025-10-08 21:29:02] 2025-10-09 01:28:27,017 | INFO     | could have reported an average CPU frequency of 3687 MHz (5 samples)
[2025-10-08 21:29:02] 2025-10-09 01:28:27,017 | INFO     | ..............................
[2025-10-08 21:29:02] 2025-10-09 01:28:27,017 | INFO     | . Timing measurements:
[2025-10-08 21:29:02] 2025-10-09 01:28:27,017 | INFO     | . get job = 0 s
[2025-10-08 21:29:02] 2025-10-09 01:28:27,017 | INFO     | . initial setup = 2 s
[2025-10-08 21:29:02] 2025-10-09 01:28:27,017 | INFO     | . payload setup = 4 s
[2025-10-08 21:29:02] 2025-10-09 01:28:27,017 | INFO     | . stage-in = 0 s
[2025-10-08 21:29:02] 2025-10-09 01:28:27,018 | INFO     | . payload execution = 2550 s
[2025-10-08 21:29:02] 2025-10-09 01:28:27,018 | INFO     | . stage-out = 2 s
[2025-10-08 21:29:02] 2025-10-09 01:28:27,018 | INFO     | . log creation = 0 s
[2025-10-08 21:29:02] 2025-10-09 01:28:27,018 | INFO     | ..............................
[2025-10-08 21:29:02] 2025-10-09 01:28:27,195 | INFO     | 
[2025-10-08 21:29:02] 2025-10-09 01:28:27,195 | INFO     | job summary report
[2025-10-08 21:29:02] 2025-10-09 01:28:27,195 | INFO     | --------------------------------------------------
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | PanDA job id: 6836603595
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | task id: 46676269
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | errors: (none)
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | pilot state: finished 
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | transexitcode: 0
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | exeerrorcode: 0
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | exeerrordiag: 
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | exitcode: 0
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | exitmsg: OK
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | cpuconsumptiontime: 23142 s
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | nevents: 400
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | neventsw: 0
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | pid: 1380127
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | pgrp: 1380127
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | corecount: 11
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | event service: False
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | sizes: {0: 2348851, 3: 2349113, 11: 2349141, 2559: 2374522, 2562: 2383520, 2564: 2383576, 2607: 2383930}
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | --------------------------------------------------
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | 
[2025-10-08 21:29:02] 2025-10-09 01:28:27,196 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-10-08 21:29:02] 2025-10-09 01:28:27,327 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,327 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,327 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,327 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,327 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | job 6836603595 has completed (purged errors)
[2025-10-08 21:29:02] 2025-10-09 01:28:27,328 | INFO     | overall cleanup function is called
[2025-10-08 21:29:02] 2025-10-09 01:28:28,337 | INFO     | --- collectZombieJob: --- 10, [1380127]
[2025-10-08 21:29:02] 2025-10-09 01:28:28,337 | INFO     | zombie collector waiting for pid 1380127
[2025-10-08 21:29:02] 2025-10-09 01:28:28,337 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 21:29:02] 2025-10-09 01:28:28,337 | INFO     | collected zombie processes
[2025-10-08 21:29:02] 2025-10-09 01:28:28,337 | INFO     | will attempt to kill all subprocesses of pid=1380127
[2025-10-08 21:29:02] 2025-10-09 01:28:29,412 | INFO     | process IDs to be killed: [1380127] (in reverse order)
[2025-10-08 21:29:02] 2025-10-09 01:28:29,719 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 21:29:02] 2025-10-09 01:28:29,719 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 21:29:02] 2025-10-09 01:28:29,757 | INFO     | did not find any defunct processes belonging to 1380127
[2025-10-08 21:29:02] 2025-10-09 01:28:29,867 | INFO     | did not find any defunct processes belonging to 1380127
[2025-10-08 21:29:02] 2025-10-09 01:28:29,867 | INFO     | ready for new job
[2025-10-08 21:29:02] 2025-10-09 01:28:29,868 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 21:29:02] 2025-10-09 01:28:29,869 | INFO     | ***************************************
[2025-10-08 21:29:02] 2025-10-09 01:28:29,869 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 21:29:02] 2025-10-09 01:28:29,869 | INFO     | ***************************************
[2025-10-08 21:29:02] 2025-10-09 01:28:29,869 | INFO     | 
[2025-10-08 21:29:02] 2025-10-09 01:28:29,895 | INFO     | architecture information:
[2025-10-08 21:29:02] 2025-10-09 01:28:29,898 | INFO     | executing command: cat /etc/os-release
[2025-10-08 21:29:02] 2025-10-09 01:28:29,941 | INFO     | cat /etc/os-release:
[2025-10-08 21:29:02] NAME="CentOS Linux"
[2025-10-08 21:29:02] VERSION="7 (Core)"
[2025-10-08 21:29:02] ID="centos"
[2025-10-08 21:29:02] ID_LIKE="rhel fedora"
[2025-10-08 21:29:02] VERSION_ID="7"
[2025-10-08 21:29:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 21:29:02] ANSI_COLOR="0;31"
[2025-10-08 21:29:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 21:29:02] HOME_URL="https://www.centos.org/"
[2025-10-08 21:29:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 21:29:02] 
[2025-10-08 21:29:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 21:29:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 21:29:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 21:29:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 21:29:02] 
[2025-10-08 21:29:02] 2025-10-09 01:28:29,942 | INFO     | ***************************************
[2025-10-08 21:29:02] 2025-10-09 01:28:30,445 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-10-08 21:29:02] 2025-10-09 01:28:30,535 | INFO     | sufficient remaining disk space (165557567488 B)
[2025-10-08 21:29:02] 2025-10-09 01:28:30,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 21:29:02] 2025-10-09 01:28:30,536 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 21:29:02] 2025-10-09 01:28:30,536 | INFO     | update_server=False
[2025-10-08 21:29:02] 2025-10-09 01:28:30,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 21:29:02] 2025-10-09 01:28:30,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 21:29:02] 2025-10-09 01:28:30,541 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 21:29:02] 2025-10-09 01:28:30,688 | INFO     | all job control threads have been joined
[2025-10-08 21:29:02] 2025-10-09 01:28:31,268 | INFO     | all payload control threads have been joined
[2025-10-08 21:29:02] 2025-10-09 01:28:31,419 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 21:29:02] 2025-10-09 01:28:31,419 | INFO     | aborting loop
[2025-10-08 21:29:02] 2025-10-09 01:28:31,471 | INFO     | all data control threads have been joined
[2025-10-08 21:29:02] 2025-10-09 01:28:31,542 | INFO     | [job] retrieve thread has finished
[2025-10-08 21:29:02] 2025-10-09 01:28:31,547 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 21:29:02] 2025-10-09 01:28:31,693 | INFO     | [job] control thread has finished
[2025-10-08 21:29:02] 2025-10-09 01:28:31,750 | INFO     | [payload] validate_post thread has finished
[2025-10-08 21:29:02] 2025-10-09 01:28:32,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 21:29:02] 2025-10-09 01:28:32,279 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 21:29:02] 2025-10-09 01:28:32,283 | INFO     | [payload] control thread has finished
[2025-10-08 21:29:02] 2025-10-09 01:28:32,425 | INFO     | [job] job monitor thread has finished
[2025-10-08 21:29:02] 2025-10-09 01:28:32,477 | INFO     | [data] control thread has finished
[2025-10-08 21:29:02] 2025-10-09 01:28:32,544 | INFO     | [data] copytool_out thread has finished
[2025-10-08 21:29:02] 2025-10-09 01:28:32,658 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 21:29:02] 2025-10-09 01:28:32,658 | INFO     | [job] validate thread has finished
[2025-10-08 21:29:02] 2025-10-09 01:28:32,796 | INFO     | [payload] failed_post thread has finished
[2025-10-08 21:29:02] 2025-10-09 01:28:32,887 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 21:29:02] 2025-10-09 01:28:32,911 | INFO     | [data] copytool_in thread has finished
[2025-10-08 21:29:02] 2025-10-09 01:28:33,214 | INFO     | [job] queue monitor thread has finished
[2025-10-08 21:29:02] 2025-10-09 01:28:34,550 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 21:29:02] 2025-10-09 01:28:49,419 | INFO     | [monitor] cgroup control has ended
[2025-10-08 21:29:02] 2025-10-09 01:28:50,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140398565967680)>', '<ExcThread(monitor, started 140398202689280)>']
[2025-10-08 21:29:02] 2025-10-09 01:28:56,007 | INFO     | all workflow threads have been joined
[2025-10-08 21:29:02] 2025-10-09 01:28:56,007 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 21:29:02] 2025-10-09 01:28:56,007 | INFO     | traces error code: 0
[2025-10-08 21:29:02] 2025-10-09 01:28:56,007 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 21:29:02] 2025-10-09 01:29:01,072 | INFO     | PID=1349746 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 21:29:02] 2025-10-09 01:29:01,072 | INFO     | .. there are 38 such processes running
[2025-10-08 21:29:02] 2025-10-09 01:29:01,078 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 21:29:02] 2025-10-09 01:29:01,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 21:29:02] 2025-10-09 01:29:01,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 21:29:02] 2025-10-09 01:29:01,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 21:29:02] 2025-10-09 01:29:01,078 | INFO     | [monitor] control thread has ended
[2025-10-08 21:29:02] 2025-10-09 01:29:01,387 [wrapper] ==== pilot stdout END ====
[2025-10-08 21:29:02] 2025-10-09 01:29:01,423 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 21:29:02] 2025-10-09 01:29:01,438 [wrapper] pilotpid: 1349746
[2025-10-08 21:29:02] 2025-10-09 01:29:01,453 [wrapper] Pilot exit status: 0
[2025-10-08 21:29:02] 2025-10-09 01:29:01,551 [wrapper] pandaids: 6836603595
[2025-10-08 21:29:02] 2025-10-09 01:29:01,907 [wrapper] cleanup supervisor_pilot 1642287 1349747
[2025-10-08 21:29:02] 2025-10-09 01:29:01,920 [wrapper] Test setup, not cleaning
[2025-10-08 21:29:02] 2025-10-09 01:29:01,946 [wrapper] apfmon messages muted
[2025-10-08 21:29:02] 2025-10-09 01:29:01,968 [wrapper] ==== wrapper stdout END ====
[2025-10-08 21:29:02] 2025-10-09 01:29:01,987 [wrapper] ==== wrapper stderr END ====
[2025-10-08 21:29:02]  *** Error codes and diagnostics ***
[2025-10-08 21:29:02]     "exeErrorCode": 0,
[2025-10-08 21:29:02]     "exeErrorDiag": "",
[2025-10-08 21:29:02]     "pilotErrorCode": 0,
[2025-10-08 21:29:02]     "pilotErrorDiag": "",
[2025-10-08 21:29:02]  *** Listing of results directory ***
[2025-10-08 21:29:02] total 411436
[2025-10-08 21:29:02] -rw-r--r--. 1 boincer umatlas    557409 Oct  8 18:57 pilot3.tar.gz
[2025-10-08 21:29:02] -rwx------. 1 boincer umatlas     36292 Oct  8 19:07 runpilot2-wrapper.sh
[2025-10-08 21:29:02] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 19:08 queuedata.json
[2025-10-08 21:29:02] -rw-r--r--. 1 boincer umatlas       100 Oct  8 20:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 21:29:02] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 20:44 run_atlas
[2025-10-08 21:29:02] -rw-r--r--. 1 boincer umatlas       105 Oct  8 20:44 job.xml
[2025-10-08 21:29:02] -rw-r--r--. 2 boincer umatlas 220947199 Oct  8 20:44 EVNT.46676267._000397.pool.root.1
[2025-10-08 21:29:02] -rw-r--r--. 2 boincer umatlas    569678 Oct  8 20:44 input.tar.gz
[2025-10-08 21:29:02] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 20:44 start_atlas.sh
[2025-10-08 21:29:02] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 20:44 shared
[2025-10-08 21:29:02] -rw-r--r--. 1 boincer umatlas         0 Oct  8 20:44 boinc_lockfile
[2025-10-08 21:29:02] -rw-r--r--. 1 boincer umatlas      2547 Oct  8 20:44 pandaJob.out
[2025-10-08 21:29:02] -rw-------. 1 boincer umatlas    979298 Oct  8 20:44 agis_schedconf.cvmfs.json
[2025-10-08 21:29:02] -rw-------. 1 boincer umatlas   1560401 Oct  8 20:44 agis_ddmendpoints.agis.ALL.json
[2025-10-08 21:29:02] drwx------. 5 boincer umatlas      4096 Oct  8 20:44 pilot3
[2025-10-08 21:29:02] -rw-------. 1 boincer umatlas 194965166 Oct  8 21:26 HITS.46676269._009833.pool.root.1
[2025-10-08 21:29:02] -rw-r--r--. 1 boincer umatlas       530 Oct  8 21:26 boinc_task_state.xml
[2025-10-08 21:29:02] -rw-------. 1 boincer umatlas      1034 Oct  8 21:27 memory_monitor_summary.json
[2025-10-08 21:29:02] -rw-------. 1 boincer umatlas    343549 Oct  8 21:27 log.46676269._009833.job.log.tgz.1
[2025-10-08 21:29:02] -rw-------. 1 boincer umatlas      7773 Oct  8 21:28 heartbeat.json
[2025-10-08 21:29:02] -rw-r--r--. 1 boincer umatlas      7165 Oct  8 21:28 init_data.xml
[2025-10-08 21:29:02] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 21:29 boinc_mmap_file
[2025-10-08 21:29:02] -rw-------. 1 boincer umatlas        95 Oct  8 21:29 pilot_heartbeat.json
[2025-10-08 21:29:02] -rw-------. 1 boincer umatlas       823 Oct  8 21:29 pilotlog.txt
[2025-10-08 21:29:02] -rw-------. 1 boincer umatlas    403287 Oct  8 21:29 log.46676269._009833.job.log.1
[2025-10-08 21:29:02] -rw-r--r--. 1 boincer umatlas        27 Oct  8 21:29 wrapper_checkpoint.txt
[2025-10-08 21:29:02] -rw-------. 1 boincer umatlas       357 Oct  8 21:29 output.list
[2025-10-08 21:29:02] -rw-r--r--. 1 boincer umatlas       620 Oct  8 21:29 runtime_log
[2025-10-08 21:29:02] -rw-------. 1 boincer umatlas    768000 Oct  8 21:29 result.tar.gz
[2025-10-08 21:29:02] -rw-------. 1 boincer umatlas       651 Oct  8 21:29 uBwKDmTRsQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDml5MMDm6IEWym.diag
[2025-10-08 21:29:02] -rw-r--r--. 1 boincer umatlas      8700 Oct  8 21:29 runtime_log.err
[2025-10-08 21:29:02] -rw-r--r--. 1 boincer umatlas     22314 Oct  8 21:29 stderr.txt
[2025-10-08 21:29:02] HITS file was successfully produced:
[2025-10-08 21:29:02] -rw-------. 1 boincer umatlas 194965166 Oct  8 21:26 shared/HITS.pool.root.1
[2025-10-08 21:29:02]  *** Contents of shared directory: ***
[2025-10-08 21:29:02] total 407504
[2025-10-08 21:29:02] -rw-r--r--. 2 boincer umatlas 220947199 Oct  8 20:44 ATLAS.root_0
[2025-10-08 21:29:02] -rw-r--r--. 2 boincer umatlas    569678 Oct  8 20:44 input.tar.gz
[2025-10-08 21:29:02] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 20:44 start_atlas.sh
[2025-10-08 21:29:02] -rw-------. 1 boincer umatlas 194965166 Oct  8 21:26 HITS.pool.root.1
[2025-10-08 21:29:02] -rw-------. 1 boincer umatlas    768000 Oct  8 21:29 result.tar.gz
21:29:04 (1341896): run_atlas exited; CPU time 23204.086081
21:29:04 (1341896): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN