Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:15:04 (2565276): wrapper (7.7.26015): starting
18:15:04 (2565276): wrapper: running run_atlas (--nthreads 12)
[2025-10-08 18:15:05] Arguments: --nthreads 12
[2025-10-08 18:15:05] Threads: 12
[2025-10-08 18:15:05] Checking for CVMFS
[2025-10-08 18:15:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 18:15:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 18:15:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 18:15:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 18:15:05] 2.11.5.0 2539 26502 239204 151490 0 232 32239873 45568001 16814 130560 0 244210683 99.862 116327885 31342 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-08 18:15:05] CVMFS is ok
[2025-10-08 18:15:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 18:15:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 18:15:05] Further information can be found at the LHC@home message board.
[2025-10-08 18:15:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 18:15:05] Checking for apptainer binary...
[2025-10-08 18:15:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 18:15:05] Running /usr/bin/apptainer --version
[2025-10-08 18:15:05] apptainer version 1.4.1-1.el9
[2025-10-08 18:15:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 18:15:06] wns0077.triumf.lcg
[2025-10-08 18:15:06] apptainer works
[2025-10-08 18:15:06] Set ATHENA_PROC_NUMBER=12
[2025-10-08 18:15:06] Set ATHENA_CORE_NUMBER=12
[2025-10-08 18:15:06] Starting ATLAS job with PandaID=6836603174
[2025-10-08 18:15:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 18:19:43]  *** The last 200 lines of the pilot log: ***
[2025-10-08 18:19:43] 2025-10-09 01:19:08,854 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 18:19:43] 2025-10-09 01:19:08,854 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | WARNING  | wrong length of table data, x=[1759972575.0], y=[28347.0] (must be same and length>=4)
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | could have reported an average CPU frequency of 2526 MHz (4 samples)
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | ..............................
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . Timing measurements:
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . get job = 0 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . initial setup = 6 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . payload setup = 13 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . stage-in = 0 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . payload execution = 38 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . stage-out = 0 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . log creation = 0 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | ..............................
[2025-10-08 18:19:43] 2025-10-09 01:19:08,856 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-08 18:19:43] 2025-10-09 01:19:08,856 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6836603174/pilotlog.txt
[2025-10-08 18:19:43] 2025-10-09 01:19:08,871 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-08 18:19:43] - Log from pilotlog.txt -
[2025-10-08 18:19:43] 2025-10-09 01:19:08,853 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6836603174/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 18:19:43] 2025-10-09 01:19:08,854 | INFO     | extracted standard info from prmon json
[2025-10-08 18:19:43] 2025-10-09 01:19:08,854 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 18:19:43] 2025-10-09 01:19:08,854 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 18:19:43] 2025-10-09 01:19:08,854 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 18:19:43] 2025-10-09 01:19:08,854 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | WARNING  | wrong length of table data, x=[1759972575.0], y=[28347.0] (must be same and length>=4)
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | could have reported an average CPU frequency of 2526 MHz (4 samples)
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | ..............................
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . Timing measurements:
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . get job = 0 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . initial setup = 6 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . payload setup = 13 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . stage-in = 0 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . payload execution = 38 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . stage-out = 0 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . log creation = 0 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | ..............................
[2025-10-08 18:19:43] 2025-10-09 01:19:08,856 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-08 18:19:43] 2025-10-09 01:19:08,856 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6836603174/pilotlog.txt
[2025-10-08 18:19:43] 2025-10-09 01:19:08,871 | WARNING  | 
[2025-10-08 18:19:43] [begin log extracts]
[2025-10-08 18:19:43] - Log from pilotlog.txt -
[2025-10-08 18:19:43] 2025-10-09 01:19:08,853 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6836603174/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 18:19:43] 2025-10-09 01:19:08,854 | INFO     | extracted standard info from prmon json
[2025-10-08 18:19:43] 2025-10-09 01:19:08,854 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 18:19:43] 2025-10-09 01:19:08,854 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 18:19:43] 2025-10-09 01:19:08,854 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 18:19:43] 2025-10-09 01:19:08,854 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | WARNING  | wrong length of table data, x=[1759972575.0], y=[28347.0] (must be same and length>=4)
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | could have reported an average CPU frequency of 2526 MHz (4 samples)
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | ..............................
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . Timing measurements:
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . get job = 0 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . initial setup = 6 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . payload setup = 13 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . stage-in = 0 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . payload execution = 38 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . stage-out = 0 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | . log creation = 0 s
[2025-10-08 18:19:43] 2025-10-09 01:19:08,855 | INFO     | ..............................
[2025-10-08 18:19:43] 2025-10-09 01:19:08,856 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-08 18:19:43] 2025-10-09 01:19:08,856 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6836603174/pilotlog.txt
[2025-10-08 18:19:43] [end log extracts]
[2025-10-08 18:19:43] 2025-10-09 01:19:08,871 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-08 18:19:43] 2025-10-09 01:19:08,872 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-08 18:19:43] 2025-10-09 01:19:09,134 | INFO     | 
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | job summary report
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | --------------------------------------------------
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | PanDA job id: 6836603174
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | task id: 46676269
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-08 18:16:39,051 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | pilot state: failed 
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | transexitcode: 65
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | exeerrorcode: 65
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | exitcode: 65
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | cpuconsumptiontime: 17 s
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | nevents: 0
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | neventsw: 0
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | pid: 2575534
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | pgrp: 2575534
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | corecount: 12
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | event service: False
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | sizes: {0: 2348678, 1: 2348877, 11: 2349167, 56: 2372486, 58: 2376778, 60: 2376806, 198: 2377100}
[2025-10-08 18:19:43] 2025-10-09 01:19:09,135 | INFO     | --------------------------------------------------
[2025-10-08 18:19:43] 2025-10-09 01:19:09,136 | INFO     | 
[2025-10-08 18:19:43] 2025-10-09 01:19:09,136 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-08 18:19:43] 2025-10-09 01:19:09,251 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,251 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,251 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,251 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,251 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | job 6836603174 has completed (purged errors)
[2025-10-08 18:19:43] 2025-10-09 01:19:09,252 | INFO     | overall cleanup function is called
[2025-10-08 18:19:43] 2025-10-09 01:19:10,261 | INFO     | --- collectZombieJob: --- 10, [2575534]
[2025-10-08 18:19:43] 2025-10-09 01:19:10,262 | INFO     | zombie collector waiting for pid 2575534
[2025-10-08 18:19:43] 2025-10-09 01:19:10,262 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 18:19:43] 2025-10-09 01:19:10,262 | INFO     | collected zombie processes
[2025-10-08 18:19:43] 2025-10-09 01:19:10,262 | INFO     | will attempt to kill all subprocesses of pid=2575534
[2025-10-08 18:19:43] 2025-10-09 01:19:10,555 | INFO     | process IDs to be killed: [2575534] (in reverse order)
[2025-10-08 18:19:43] 2025-10-09 01:19:10,657 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 18:19:43] 2025-10-09 01:19:10,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 18:19:43] 2025-10-09 01:19:10,696 | INFO     | did not find any defunct processes belonging to 2575534
[2025-10-08 18:19:43] 2025-10-09 01:19:10,716 | INFO     | did not find any defunct processes belonging to 2575534
[2025-10-08 18:19:43] 2025-10-09 01:19:10,716 | INFO     | ready for new job
[2025-10-08 18:19:43] 2025-10-09 01:19:10,716 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 18:19:43] 2025-10-09 01:19:10,739 | INFO     | ***************************************
[2025-10-08 18:19:43] 2025-10-09 01:19:10,739 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 18:19:43] 2025-10-09 01:19:10,739 | INFO     | ***************************************
[2025-10-08 18:19:43] 2025-10-09 01:19:10,739 | INFO     | 
[2025-10-08 18:19:43] 2025-10-09 01:19:10,741 | INFO     | architecture information:
[2025-10-08 18:19:43] 2025-10-09 01:19:10,759 | INFO     | executing command: cat /etc/os-release
[2025-10-08 18:19:43] 2025-10-09 01:19:10,865 | INFO     | cat /etc/os-release:
[2025-10-08 18:19:43] NAME="CentOS Linux"
[2025-10-08 18:19:43] VERSION="7 (Core)"
[2025-10-08 18:19:43] ID="centos"
[2025-10-08 18:19:43] ID_LIKE="rhel fedora"
[2025-10-08 18:19:43] VERSION_ID="7"
[2025-10-08 18:19:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 18:19:43] ANSI_COLOR="0;31"
[2025-10-08 18:19:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 18:19:43] HOME_URL="https://www.centos.org/"
[2025-10-08 18:19:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 18:19:43] 
[2025-10-08 18:19:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 18:19:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 18:19:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 18:19:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 18:19:43] 
[2025-10-08 18:19:43] 2025-10-09 01:19:10,866 | INFO     | ***************************************
[2025-10-08 18:19:43] 2025-10-09 01:19:11,369 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-08 18:19:43] 2025-10-09 01:19:11,473 | INFO     | sufficient remaining disk space (1843757318144 B)
[2025-10-08 18:19:43] 2025-10-09 01:19:11,473 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 18:19:43] 2025-10-09 01:19:11,473 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 18:19:43] 2025-10-09 01:19:11,473 | INFO     | update_server=False
[2025-10-08 18:19:43] 2025-10-09 01:19:11,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 18:19:43] 2025-10-09 01:19:11,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 18:19:43] 2025-10-09 01:19:11,480 | INFO     | aborting loop
[2025-10-08 18:19:43] 2025-10-09 01:19:11,654 | INFO     | all payload control threads have been joined
[2025-10-08 18:19:43] 2025-10-09 01:19:11,775 | INFO     | all data control threads have been joined
[2025-10-08 18:19:43] 2025-10-09 01:19:12,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 18:19:43] 2025-10-09 01:19:12,480 | INFO     | [job] retrieve thread has finished
[2025-10-08 18:19:43] 2025-10-09 01:19:12,486 | INFO     | [job] job monitor thread has finished
[2025-10-08 18:19:43] 2025-10-09 01:19:12,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 18:19:43] 2025-10-09 01:19:12,659 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 18:19:43] 2025-10-09 01:19:12,660 | INFO     | [payload] control thread has finished
[2025-10-08 18:19:43] 2025-10-09 01:19:12,773 | INFO     | [payload] failed_post thread has finished
[2025-10-08 18:19:43] 2025-10-09 01:19:12,783 | INFO     | [data] control thread has finished
[2025-10-08 18:19:43] 2025-10-09 01:19:12,968 | INFO     | [payload] validate_post thread has finished
[2025-10-08 18:19:43] 2025-10-09 01:19:13,023 | INFO     | [data] copytool_in thread has finished
[2025-10-08 18:19:43] 2025-10-09 01:19:13,089 | INFO     | all job control threads have been joined
[2025-10-08 18:19:43] 2025-10-09 01:19:13,140 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 18:19:43] 2025-10-09 01:19:13,257 | INFO     | [job] validate thread has finished
[2025-10-08 18:19:43] 2025-10-09 01:19:13,351 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 18:19:43] 2025-10-09 01:19:13,418 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 18:19:43] 2025-10-09 01:19:14,095 | INFO     | [job] control thread has finished
[2025-10-08 18:19:43] 2025-10-09 01:19:14,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 18:19:43] 2025-10-09 01:19:14,452 | INFO     | [data] copytool_out thread has finished
[2025-10-08 18:19:43] 2025-10-09 01:19:15,165 | INFO     | [job] queue monitor thread has finished
[2025-10-08 18:19:43] 2025-10-09 01:19:16,583 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 18:19:43] 2025-10-09 01:19:31,921 | INFO     | [monitor] cgroup control has ended
[2025-10-08 18:19:43] 2025-10-09 01:19:32,931 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140156072765248)>', '<ExcThread(monitor, started 140155671254784)>']
[2025-10-08 18:19:43] 2025-10-09 01:19:37,956 | INFO     | all workflow threads have been joined
[2025-10-08 18:19:43] 2025-10-09 01:19:37,957 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 18:19:43] 2025-10-09 01:19:37,957 | INFO     | traces error code: 0
[2025-10-08 18:19:43] 2025-10-09 01:19:37,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 18:19:43] 2025-10-09 01:19:41,956 | INFO     | PID=2568946 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 18:19:43] 2025-10-09 01:19:41,956 | INFO     | .. there are 21 such processes running
[2025-10-08 18:19:43] 2025-10-09 01:19:41,957 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 18:19:43] 2025-10-09 01:19:41,957 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 18:19:43] 2025-10-09 01:19:41,957 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 18:19:43] 2025-10-09 01:19:41,957 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 18:19:43] 2025-10-09 01:19:41,957 | CRITICAL | thread 'MainThread' is not alive
[2025-10-08 18:19:43] 2025-10-09 01:19:41,957 | INFO     | [monitor] control thread has ended
[2025-10-08 18:19:43] 2025-10-09 01:19:42,168 [wrapper] ==== pilot stdout END ====
[2025-10-08 18:19:43] 2025-10-09 01:19:42,189 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 18:19:43] 2025-10-09 01:19:42,249 [wrapper] pilotpid: 2568946
[2025-10-08 18:19:43] 2025-10-09 01:19:42,326 [wrapper] Pilot exit status: 0
[2025-10-08 18:19:43] 2025-10-09 01:19:42,456 [wrapper] pandaids: 6836603174
[2025-10-08 18:19:43] 2025-10-09 01:19:42,835 [wrapper] cleanup supervisor_pilot 2568952 2568947
[2025-10-08 18:19:43] 2025-10-09 01:19:42,897 [wrapper] Test setup, not cleaning
[2025-10-08 18:19:43] 2025-10-09 01:19:42,914 [wrapper] apfmon messages muted
[2025-10-08 18:19:43] 2025-10-09 01:19:42,952 [wrapper] ==== wrapper stdout END ====
[2025-10-08 18:19:43] 2025-10-09 01:19:42,976 [wrapper] ==== wrapper stderr END ====
[2025-10-08 18:19:43]  *** Error codes and diagnostics ***
[2025-10-08 18:19:43]     "exeErrorCode": 65,
[2025-10-08 18:19:43]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-08 18:19:43]     "pilotErrorCode": 1305,
[2025-10-08 18:19:43]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-08 18:19:43]  *** Listing of results directory ***
[2025-10-08 18:19:43] total 221188
[2025-10-08 18:19:43] -rw-r--r--. 1 boinc boinc    557409 Oct  8 15:57 pilot3.tar.gz
[2025-10-08 18:19:43] -rwx------. 1 boinc boinc     36292 Oct  8 16:03 runpilot2-wrapper.sh
[2025-10-08 18:19:43] -rw-r--r--. 1 boinc boinc      5112 Oct  8 16:05 queuedata.json
[2025-10-08 18:19:43] -rw-r--r--. 1 boinc boinc       100 Oct  8 18:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 18:19:43] -rwxr-xr-x. 1 boinc boinc      7986 Oct  8 18:15 run_atlas
[2025-10-08 18:19:43] -rw-r--r--. 1 boinc boinc       105 Oct  8 18:15 job.xml
[2025-10-08 18:19:43] -rw-r--r--. 1 boinc boinc      6593 Oct  8 18:15 init_data.xml
[2025-10-08 18:19:43] -rw-r--r--. 2 boinc boinc 222371135 Oct  8 18:15 EVNT.46676267._000381.pool.root.1
[2025-10-08 18:19:43] -rw-r--r--. 2 boinc boinc     15120 Oct  8 18:15 start_atlas.sh
[2025-10-08 18:19:43] drwxrwx--x. 2 boinc boinc      4096 Oct  8 18:15 shared
[2025-10-08 18:19:43] -rw-r--r--. 2 boinc boinc    569681 Oct  8 18:15 input.tar.gz
[2025-10-08 18:19:43] -rw-r--r--. 1 boinc boinc         0 Oct  8 18:15 boinc_lockfile
[2025-10-08 18:19:43] -rw-r--r--. 1 boinc boinc      2548 Oct  8 18:15 pandaJob.out
[2025-10-08 18:19:43] -rw-------. 1 boinc boinc    979290 Oct  8 18:15 agis_schedconf.cvmfs.json
[2025-10-08 18:19:43] -rw-------. 1 boinc boinc   1560401 Oct  8 18:15 agis_ddmendpoints.agis.ALL.json
[2025-10-08 18:19:43] drwx------. 5 boinc boinc      4096 Oct  8 18:15 pilot3
[2025-10-08 18:19:43] -rw-r--r--. 1 boinc boinc       522 Oct  8 18:16 boinc_task_state.xml
[2025-10-08 18:19:43] -rw-------. 1 boinc boinc       965 Oct  8 18:16 memory_monitor_summary.json
[2025-10-08 18:19:43] -rw-------. 1 boinc boinc     21770 Oct  8 18:16 log.46676269._009444.job.log.tgz.1
[2025-10-08 18:19:43] -rw-------. 1 boinc boinc      8404 Oct  8 18:19 heartbeat.json
[2025-10-08 18:19:43] -rw-------. 1 boinc boinc       893 Oct  8 18:19 pilotlog.txt
[2025-10-08 18:19:43] -rw-------. 1 boinc boinc        95 Oct  8 18:19 pilot_heartbeat.json
[2025-10-08 18:19:43] -rw-r--r--. 1 boinc boinc      8192 Oct  8 18:19 boinc_mmap_file
[2025-10-08 18:19:43] -rw-------. 1 boinc boinc     90448 Oct  8 18:19 log.46676269._009444.job.log.1
[2025-10-08 18:19:43] -rw-r--r--. 1 boinc boinc        22 Oct  8 18:19 wrapper_checkpoint.txt
[2025-10-08 18:19:43] -rw-------. 1 boinc boinc       188 Oct  8 18:19 output.list
[2025-10-08 18:19:43] -rw-r--r--. 1 boinc boinc       620 Oct  8 18:19 runtime_log
[2025-10-08 18:19:43] -rw-------. 1 boinc boinc    133120 Oct  8 18:19 result.tar.gz
[2025-10-08 18:19:43] -rw-------. 1 boinc boinc       647 Oct  8 18:19 wOlKDmmMsQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDme3MMDmhx268m.diag
[2025-10-08 18:19:43] -rw-r--r--. 1 boinc boinc      8528 Oct  8 18:19 runtime_log.err
[2025-10-08 18:19:43] -rw-r--r--. 1 boinc boinc     21258 Oct  8 18:19 stderr.txt
[2025-10-08 18:19:43] No HITS result produced
[2025-10-08 18:19:43]  *** Contents of shared directory: ***
[2025-10-08 18:19:43] total 217868
[2025-10-08 18:19:43] -rw-r--r--. 2 boinc boinc 222371135 Oct  8 18:15 ATLAS.root_0
[2025-10-08 18:19:43] -rw-r--r--. 2 boinc boinc     15120 Oct  8 18:15 start_atlas.sh
[2025-10-08 18:19:43] -rw-r--r--. 2 boinc boinc    569681 Oct  8 18:15 input.tar.gz
[2025-10-08 18:19:43] -rw-------. 1 boinc boinc    133120 Oct  8 18:19 result.tar.gz
18:19:45 (2565276): run_atlas exited; CPU time 25.029714
18:19:45 (2565276): called boinc_finish(0)

</stderr_txt>
]]>

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