Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:47:35 (3132430): wrapper (7.7.26015): starting
20:47:35 (3132430): wrapper: running run_atlas (--nthreads 12)
[2025-10-08 20:47:35] Arguments: --nthreads 12
[2025-10-08 20:47:35] Threads: 12
[2025-10-08 20:47:35] Checking for CVMFS
[2025-10-08 20:47:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 20:47:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 20:47:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 20:47:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 20:47:35] 2.13.2.0 1923533 125524 466800 151490 1 283 28536236 32935936 18473 16776704 0 410726070 99.648 371862398 17339 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-08 20:47:35] CVMFS is ok
[2025-10-08 20:47:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 20:47:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 20:47:36] Further information can be found at the LHC@home message board.
[2025-10-08 20:47:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 20:47:36] Checking for apptainer binary...
[2025-10-08 20:47:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 20:47:36] Running /usr/bin/apptainer --version
[2025-10-08 20:47:36] apptainer version 1.4.3-1.el9
[2025-10-08 20:47:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 20:47:36] c7-3-17.aglt2.org
[2025-10-08 20:47:36] apptainer works
[2025-10-08 20:47:36] Set ATHENA_PROC_NUMBER=12
[2025-10-08 20:47:36] Set ATHENA_CORE_NUMBER=12
[2025-10-08 20:47:36] Starting ATLAS job with PandaID=6831974758
[2025-10-08 20:47:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 23:01:19]  *** The last 200 lines of the pilot log: ***
[2025-10-08 23:01:19] 2025-10-09 03:00:23,598 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 23:01:19] 2025-10-09 03:00:23,599 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 23:01:19] 2025-10-09 03:00:23,599 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 23:01:19] 2025-10-09 03:00:23,601 | INFO     | fitting pss+swap vs Time
[2025-10-08 23:01:19] 2025-10-09 03:00:23,623 | INFO     | sum of square deviations: 681238274.3769239
[2025-10-08 23:01:19] 2025-10-09 03:00:23,623 | INFO     | sum of deviations: 11775332223.584618
[2025-10-08 23:01:19] 2025-10-09 03:00:23,624 | INFO     | mean x: 1759974847.5307693
[2025-10-08 23:01:19] 2025-10-09 03:00:23,624 | INFO     | mean y: 2283779.3538461537
[2025-10-08 23:01:19] 2025-10-09 03:00:23,624 | INFO     | -- intersect: -30419213829.221363
[2025-10-08 23:01:19] 2025-10-09 03:00:23,624 | INFO     | intersect: -30419213829.221363
[2025-10-08 23:01:19] 2025-10-09 03:00:23,624 | INFO     | chi2: 2.114314328573932
[2025-10-08 23:01:19] 2025-10-09 03:00:23,624 | INFO     | sum of square deviations: 605611662.9280019
[2025-10-08 23:01:19] 2025-10-09 03:00:23,625 | INFO     | sum of deviations: 18297056135.200012
[2025-10-08 23:01:19] 2025-10-09 03:00:23,625 | INFO     | mean x: 1759974695.024
[2025-10-08 23:01:19] 2025-10-09 03:00:23,625 | INFO     | mean y: 2296435.6
[2025-10-08 23:01:19] 2025-10-09 03:00:23,625 | INFO     | -- intersect: -53170979052.01891
[2025-10-08 23:01:19] 2025-10-09 03:00:23,625 | INFO     | intersect: -53170979052.01891
[2025-10-08 23:01:19] 2025-10-09 03:00:23,625 | INFO     | chi2: 1.402979664598521
[2025-10-08 23:01:19] 2025-10-09 03:00:23,626 | INFO     | current chi2=1.402979664598521 (change=33.643751752616346 %)
[2025-10-08 23:01:19] 2025-10-09 03:00:23,626 | INFO     | sum of square deviations: 535798747.96666616
[2025-10-08 23:01:19] 2025-10-09 03:00:23,638 | INFO     | sum of deviations: 17462421783.950005
[2025-10-08 23:01:19] 2025-10-09 03:00:23,639 | INFO     | mean x: 1759974542.5166667
[2025-10-08 23:01:19] 2025-10-09 03:00:23,639 | INFO     | mean y: 2294642.775
[2025-10-08 23:01:19] 2025-10-09 03:00:23,639 | INFO     | -- intersect: -57357708356.6208
[2025-10-08 23:01:19] 2025-10-09 03:00:23,639 | INFO     | intersect: -57357708356.6208
[2025-10-08 23:01:19] 2025-10-09 03:00:23,639 | INFO     | chi2: 1.403251715272041
[2025-10-08 23:01:19] 2025-10-09 03:00:23,639 | INFO     | current chi2=1.403251715272041 (change=-0.019390920651563767 %)
[2025-10-08 23:01:19] 2025-10-09 03:00:23,639 | INFO     | right removable region: 119
[2025-10-08 23:01:19] 2025-10-09 03:00:23,640 | INFO     | sum of square deviations: 605617031.8720003
[2025-10-08 23:01:19] 2025-10-09 03:00:23,642 | INFO     | sum of deviations: -5929989283.551999
[2025-10-08 23:01:19] 2025-10-09 03:00:23,642 | INFO     | mean x: 1759975000.032
[2025-10-08 23:01:19] 2025-10-09 03:00:23,642 | INFO     | mean y: 2318903.888
[2025-10-08 23:01:19] 2025-10-09 03:00:23,642 | INFO     | -- intersect: 17235376001.454926
[2025-10-08 23:01:19] 2025-10-09 03:00:23,642 | INFO     | intersect: 17235376001.454926
[2025-10-08 23:01:19] 2025-10-09 03:00:23,642 | INFO     | chi2: 0.7820454011397749
[2025-10-08 23:01:19] 2025-10-09 03:00:23,642 | INFO     | current chi2=0.7820454011397749 (change=63.01186675174969 %)
[2025-10-08 23:01:19] 2025-10-09 03:00:23,643 | INFO     | sum of square deviations: 535809851.86666626
[2025-10-08 23:01:19] 2025-10-09 03:00:23,643 | INFO     | sum of deviations: -5930627776.133332
[2025-10-08 23:01:19] 2025-10-09 03:00:23,643 | INFO     | mean x: 1759975152.5333333
[2025-10-08 23:01:19] 2025-10-09 03:00:23,643 | INFO     | mean y: 2318867.158333333
[2025-10-08 23:01:19] 2025-10-09 03:00:23,643 | INFO     | -- intersect: 19482657813.06497
[2025-10-08 23:01:19] 2025-10-09 03:00:23,643 | INFO     | intersect: 19482657813.06497
[2025-10-08 23:01:19] 2025-10-09 03:00:23,644 | INFO     | chi2: 0.7804373399329683
[2025-10-08 23:01:19] 2025-10-09 03:00:23,644 | INFO     | current chi2=0.7804373399329683 (change=0.20562248744932754 %)
[2025-10-08 23:01:19] 2025-10-09 03:00:23,644 | INFO     | left removable region: 20
[2025-10-08 23:01:19] 2025-10-09 03:00:23,644 | INFO     | sum of square deviations: 300852489.95959556
[2025-10-08 23:01:19] 2025-10-09 03:00:23,644 | INFO     | sum of deviations: 2149259902.6868677
[2025-10-08 23:01:19] 2025-10-09 03:00:23,644 | INFO     | mean x: 1759975122.020202
[2025-10-08 23:01:19] 2025-10-09 03:00:23,644 | INFO     | mean y: 2328655.6565656564
[2025-10-08 23:01:19] 2025-10-09 03:00:23,644 | INFO     | -- intersect: -12570756446.588911
[2025-10-08 23:01:19] 2025-10-09 03:00:23,645 | INFO     | intersect: -12570756446.588911
[2025-10-08 23:01:19] 2025-10-09 03:00:23,645 | INFO     | chi2: 0.03016705734989985
[2025-10-08 23:01:19] 2025-10-09 03:00:23,645 | INFO     | -- intersect: -12570756446.588911
[2025-10-08 23:01:19] 2025-10-09 03:00:23,645 | INFO     | current memory leak: 7.14 B/s (using 99 data points, chi2=0.03)
[2025-10-08 23:01:19] 2025-10-09 03:00:23,649 | INFO     | could have reported an average CPU frequency of 3037 MHz (8 samples)
[2025-10-08 23:01:19] 2025-10-09 03:00:23,650 | INFO     | ..............................
[2025-10-08 23:01:19] 2025-10-09 03:00:23,650 | INFO     | . Timing measurements:
[2025-10-08 23:01:19] 2025-10-09 03:00:23,650 | INFO     | . get job = 0 s
[2025-10-08 23:01:19] 2025-10-09 03:00:23,650 | INFO     | . initial setup = 3 s
[2025-10-08 23:01:19] 2025-10-09 03:00:23,650 | INFO     | . payload setup = 9 s
[2025-10-08 23:01:19] 2025-10-09 03:00:23,650 | INFO     | . stage-in = 0 s
[2025-10-08 23:01:19] 2025-10-09 03:00:23,650 | INFO     | . payload execution = 7897 s
[2025-10-08 23:01:19] 2025-10-09 03:00:23,650 | INFO     | . stage-out = 0 s
[2025-10-08 23:01:19] 2025-10-09 03:00:23,650 | INFO     | . log creation = 0 s
[2025-10-08 23:01:19] 2025-10-09 03:00:23,650 | INFO     | ..............................
[2025-10-08 23:01:19] 2025-10-09 03:00:23,969 | INFO     | 
[2025-10-08 23:01:19] 2025-10-09 03:00:23,970 | INFO     | job summary report
[2025-10-08 23:01:19] 2025-10-09 03:00:23,970 | INFO     | --------------------------------------------------
[2025-10-08 23:01:19] 2025-10-09 03:00:23,970 | INFO     | PanDA job id: 6831974758
[2025-10-08 23:01:19] 2025-10-09 03:00:23,970 | INFO     | task id: 46376905
[2025-10-08 23:01:19] 2025-10-09 03:00:23,970 | INFO     | errors: (none)
[2025-10-08 23:01:19] 2025-10-09 03:00:23,970 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 23:01:19] 2025-10-09 03:00:23,970 | INFO     | pilot state: finished 
[2025-10-08 23:01:19] 2025-10-09 03:00:23,970 | INFO     | transexitcode: 0
[2025-10-08 23:01:19] 2025-10-09 03:00:23,970 | INFO     | exeerrorcode: 0
[2025-10-08 23:01:19] 2025-10-09 03:00:23,970 | INFO     | exeerrordiag: 
[2025-10-08 23:01:19] 2025-10-09 03:00:23,970 | INFO     | exitcode: 0
[2025-10-08 23:01:19] 2025-10-09 03:00:23,970 | INFO     | exitmsg: OK
[2025-10-08 23:01:19] 2025-10-09 03:00:23,970 | INFO     | cpuconsumptiontime: 30184 s
[2025-10-08 23:01:19] 2025-10-09 03:00:23,971 | INFO     | nevents: 400
[2025-10-08 23:01:19] 2025-10-09 03:00:23,971 | INFO     | neventsw: 0
[2025-10-08 23:01:19] 2025-10-09 03:00:23,971 | INFO     | pid: 3146536
[2025-10-08 23:01:19] 2025-10-09 03:00:23,971 | INFO     | pgrp: 3146536
[2025-10-08 23:01:19] 2025-10-09 03:00:23,971 | INFO     | corecount: 12
[2025-10-08 23:01:19] 2025-10-09 03:00:23,971 | INFO     | event service: False
[2025-10-08 23:01:19] 2025-10-09 03:00:23,971 | INFO     | sizes: {0: 2348536, 1: 2348791, 8: 2349053, 12: 2349081, 7909: 2376681, 7910: 2376680, 7911: 2385862, 7913: 2385918, 7929: 2386112}
[2025-10-08 23:01:19] 2025-10-09 03:00:23,971 | INFO     | --------------------------------------------------
[2025-10-08 23:01:19] 2025-10-09 03:00:23,971 | INFO     | 
[2025-10-08 23:01:19] 2025-10-09 03:00:23,971 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-08 23:01:19] 2025-10-09 03:00:24,067 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,068 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,068 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,068 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,092 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,092 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,093 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,093 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,093 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,093 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,093 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,093 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 23:01:19] 2025-10-09 03:00:24,093 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,093 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 23:01:19] 2025-10-09 03:00:24,093 | INFO     | job 6831974758 has completed (purged errors)
[2025-10-08 23:01:19] 2025-10-09 03:00:24,093 | INFO     | overall cleanup function is called
[2025-10-08 23:01:19] 2025-10-09 03:00:25,124 | INFO     | --- collectZombieJob: --- 10, [3146536]
[2025-10-08 23:01:19] 2025-10-09 03:00:25,125 | INFO     | zombie collector waiting for pid 3146536
[2025-10-08 23:01:19] 2025-10-09 03:00:25,125 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 23:01:19] 2025-10-09 03:00:25,125 | INFO     | collected zombie processes
[2025-10-08 23:01:19] 2025-10-09 03:00:25,125 | INFO     | will attempt to kill all subprocesses of pid=3146536
[2025-10-08 23:01:19] 2025-10-09 03:00:26,881 | INFO     | process IDs to be killed: [3146536] (in reverse order)
[2025-10-08 23:01:19] 2025-10-09 03:00:27,158 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 23:01:19] 2025-10-09 03:00:27,159 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 23:01:19] 2025-10-09 03:00:27,184 | INFO     | did not find any defunct processes belonging to 3146536
[2025-10-08 23:01:19] 2025-10-09 03:00:27,307 | INFO     | did not find any defunct processes belonging to 3146536
[2025-10-08 23:01:19] 2025-10-09 03:00:27,307 | INFO     | ready for new job
[2025-10-08 23:01:19] 2025-10-09 03:00:27,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 23:01:19] 2025-10-09 03:00:27,313 | INFO     | ***************************************
[2025-10-08 23:01:19] 2025-10-09 03:00:27,313 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 23:01:19] 2025-10-09 03:00:27,313 | INFO     | ***************************************
[2025-10-08 23:01:19] 2025-10-09 03:00:27,313 | INFO     | 
[2025-10-08 23:01:19] 2025-10-09 03:00:27,323 | INFO     | architecture information:
[2025-10-08 23:01:19] 2025-10-09 03:00:27,335 | INFO     | executing command: cat /etc/os-release
[2025-10-08 23:01:19] 2025-10-09 03:00:27,354 | INFO     | cat /etc/os-release:
[2025-10-08 23:01:19] NAME="CentOS Linux"
[2025-10-08 23:01:19] VERSION="7 (Core)"
[2025-10-08 23:01:19] ID="centos"
[2025-10-08 23:01:19] ID_LIKE="rhel fedora"
[2025-10-08 23:01:19] VERSION_ID="7"
[2025-10-08 23:01:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 23:01:19] ANSI_COLOR="0;31"
[2025-10-08 23:01:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 23:01:19] HOME_URL="https://www.centos.org/"
[2025-10-08 23:01:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 23:01:19] 
[2025-10-08 23:01:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 23:01:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 23:01:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 23:01:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 23:01:19] 
[2025-10-08 23:01:19] 2025-10-09 03:00:27,355 | INFO     | ***************************************
[2025-10-08 23:01:19] 2025-10-09 03:00:27,859 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-08 23:01:19] 2025-10-09 03:00:27,931 | INFO     | sufficient remaining disk space (74059874304 B)
[2025-10-08 23:01:19] 2025-10-09 03:00:27,931 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 23:01:19] 2025-10-09 03:00:27,931 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 23:01:19] 2025-10-09 03:00:27,936 | INFO     | update_server=False
[2025-10-08 23:01:19] 2025-10-09 03:00:27,936 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 23:01:19] 2025-10-09 03:00:27,936 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 23:01:19] 2025-10-09 03:00:27,936 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 23:01:19] 2025-10-09 03:00:27,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 23:01:19] 2025-10-09 03:00:27,957 | INFO     | aborting loop
[2025-10-08 23:01:19] 2025-10-09 03:00:28,253 | INFO     | all data control threads have been joined
[2025-10-08 23:01:19] 2025-10-09 03:00:28,717 | INFO     | all payload control threads have been joined
[2025-10-08 23:01:19] 2025-10-09 03:00:28,907 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 23:01:19] 2025-10-09 03:00:28,923 | INFO     | all job control threads have been joined
[2025-10-08 23:01:19] 2025-10-09 03:00:28,943 | INFO     | [job] retrieve thread has finished
[2025-10-08 23:01:19] 2025-10-09 03:00:28,962 | INFO     | [job] job monitor thread has finished
[2025-10-08 23:01:19] 2025-10-09 03:00:29,064 | INFO     | [job] validate thread has finished
[2025-10-08 23:01:19] 2025-10-09 03:00:29,065 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 23:01:19] 2025-10-09 03:00:29,264 | INFO     | [data] control thread has finished
[2025-10-08 23:01:19] 2025-10-09 03:00:29,476 | INFO     | [payload] failed_post thread has finished
[2025-10-08 23:01:19] 2025-10-09 03:00:29,699 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 23:01:19] 2025-10-09 03:00:29,738 | INFO     | [payload] control thread has finished
[2025-10-08 23:01:19] 2025-10-09 03:00:29,913 | INFO     | [job] queue monitor thread has finished
[2025-10-08 23:01:19] 2025-10-09 03:00:29,929 | INFO     | [job] control thread has finished
[2025-10-08 23:01:19] 2025-10-09 03:00:29,935 | INFO     | [payload] validate_post thread has finished
[2025-10-08 23:01:19] 2025-10-09 03:00:29,945 | INFO     | [data] copytool_out thread has finished
[2025-10-08 23:01:19] 2025-10-09 03:00:29,972 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 23:01:19] 2025-10-09 03:00:30,219 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 23:01:19] 2025-10-09 03:00:30,220 | INFO     | [data] copytool_in thread has finished
[2025-10-08 23:01:19] 2025-10-09 03:00:31,947 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 23:01:19] 2025-10-09 03:00:58,957 | INFO     | PID=3140011 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 23:01:19] 2025-10-09 03:00:58,957 | INFO     | .. there are 30 such processes running
[2025-10-08 23:01:19] 2025-10-09 03:00:58,963 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 23:01:19] 2025-10-09 03:00:58,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 23:01:19] 2025-10-09 03:00:58,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 23:01:19] 2025-10-09 03:01:11,236 | INFO     | [monitor] cgroup control has ended
[2025-10-08 23:01:19] 2025-10-09 03:01:13,261 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140125420832576)>', '<ExcThread(monitor, started 140124708923136)>']
[2025-10-08 23:01:19] 2025-10-09 03:01:14,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 23:01:19] 2025-10-09 03:01:14,112 | INFO     | [monitor] control thread has ended
[2025-10-08 23:01:19] 2025-10-09 03:01:18,287 | INFO     | all workflow threads have been joined
[2025-10-08 23:01:19] 2025-10-09 03:01:18,287 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 23:01:19] 2025-10-09 03:01:18,288 | INFO     | traces error code: 0
[2025-10-08 23:01:19] 2025-10-09 03:01:18,288 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 23:01:19] 2025-10-09 03:01:18,616 [wrapper] ==== pilot stdout END ====
[2025-10-08 23:01:19] 2025-10-09 03:01:18,651 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 23:01:19] 2025-10-09 03:01:18,657 [wrapper] pilotpid: 3140011
[2025-10-08 23:01:19] 2025-10-09 03:01:18,659 [wrapper] Pilot exit status: 0
[2025-10-08 23:01:19] 2025-10-09 03:01:18,729 [wrapper] pandaids: 6831974758
[2025-10-08 23:01:19] 2025-10-09 03:01:19,174 [wrapper] cleanup supervisor_pilot 3929360 3140012
[2025-10-08 23:01:19] 2025-10-09 03:01:19,206 [wrapper] Test setup, not cleaning
[2025-10-08 23:01:19] 2025-10-09 03:01:19,232 [wrapper] apfmon messages muted
[2025-10-08 23:01:19] 2025-10-09 03:01:19,260 [wrapper] ==== wrapper stdout END ====
[2025-10-08 23:01:19] 2025-10-09 03:01:19,288 [wrapper] ==== wrapper stderr END ====
[2025-10-08 23:01:19]  *** Error codes and diagnostics ***
[2025-10-08 23:01:19]     "exeErrorCode": 0,
[2025-10-08 23:01:19]     "exeErrorDiag": "",
[2025-10-08 23:01:19]     "pilotErrorCode": 0,
[2025-10-08 23:01:19]     "pilotErrorDiag": "",
[2025-10-08 23:01:19]  *** Listing of results directory ***
[2025-10-08 23:01:19] total 389480
[2025-10-08 23:01:19] -rw-r--r--. 1 boincer umatlas    552446 Oct  5 16:26 pilot3.tar.gz
[2025-10-08 23:01:19] -rwx------. 1 boincer umatlas     36292 Oct  5 16:38 runpilot2-wrapper.sh
[2025-10-08 23:01:19] -rw-r--r--. 1 boincer umatlas      5112 Oct  5 16:38 queuedata.json
[2025-10-08 23:01:19] -rw-r--r--. 1 boincer umatlas       100 Oct  8 20:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 23:01:19] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 20:47 run_atlas
[2025-10-08 23:01:19] -rw-r--r--. 1 boincer umatlas       105 Oct  8 20:47 job.xml
[2025-10-08 23:01:19] -rw-r--r--. 2 boincer umatlas 215404289 Oct  8 20:47 EVNT.46376901._003520.pool.root.1
[2025-10-08 23:01:19] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 20:47 start_atlas.sh
[2025-10-08 23:01:19] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 20:47 shared
[2025-10-08 23:01:19] -rw-r--r--. 2 boincer umatlas    565599 Oct  8 20:47 input.tar.gz
[2025-10-08 23:01:19] -rw-r--r--. 1 boincer umatlas         0 Oct  8 20:47 boinc_lockfile
[2025-10-08 23:01:19] -rw-r--r--. 1 boincer umatlas      2517 Oct  8 20:47 pandaJob.out
[2025-10-08 23:01:19] -rw-------. 1 boincer umatlas    979298 Oct  8 20:47 agis_schedconf.cvmfs.json
[2025-10-08 23:01:19] -rw-------. 1 boincer umatlas   1560401 Oct  8 20:47 agis_ddmendpoints.agis.ALL.json
[2025-10-08 23:01:19] drwx------. 4 boincer umatlas      4096 Oct  8 20:47 pilot3
[2025-10-08 23:01:19] -rw-r--r--. 1 boincer umatlas      6935 Oct  8 22:57 init_data.xml
[2025-10-08 23:01:19] -rw-r--r--. 1 boincer umatlas       529 Oct  8 22:59 boinc_task_state.xml
[2025-10-08 23:01:19] -rw-------. 1 boincer umatlas 176760106 Oct  8 22:59 HITS.46376905._095474.pool.root.1
[2025-10-08 23:01:19] -rw-------. 1 boincer umatlas      1042 Oct  8 23:00 memory_monitor_summary.json
[2025-10-08 23:01:19] -rw-------. 1 boincer umatlas    411858 Oct  8 23:00 log.46376905._095474.job.log.tgz.1
[2025-10-08 23:01:19] -rw-------. 1 boincer umatlas      7793 Oct  8 23:00 heartbeat.json
[2025-10-08 23:01:19] -rw-------. 1 boincer umatlas        95 Oct  8 23:00 pilot_heartbeat.json
[2025-10-08 23:01:19] -rw-------. 1 boincer umatlas      4824 Oct  8 23:01 pilotlog.txt
[2025-10-08 23:01:19] -rw-------. 1 boincer umatlas    973929 Oct  8 23:01 log.46376905._095474.job.log.1
[2025-10-08 23:01:19] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 23:01 boinc_mmap_file
[2025-10-08 23:01:19] -rw-------. 1 boincer umatlas       357 Oct  8 23:01 output.list
[2025-10-08 23:01:19] -rw-r--r--. 1 boincer umatlas       620 Oct  8 23:01 runtime_log
[2025-10-08 23:01:19] -rw-------. 1 boincer umatlas   1402880 Oct  8 23:01 result.tar.gz
[2025-10-08 23:01:19] -rw-------. 1 boincer umatlas       655 Oct  8 23:01 xfdKDmxfkP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmy3QNDmAenXOo.diag
[2025-10-08 23:01:19] -rw-r--r--. 1 boincer umatlas      8700 Oct  8 23:01 runtime_log.err
[2025-10-08 23:01:19] -rw-r--r--. 1 boincer umatlas        27 Oct  8 23:01 wrapper_checkpoint.txt
[2025-10-08 23:01:19] -rw-r--r--. 1 boincer umatlas     20978 Oct  8 23:01 stderr.txt
[2025-10-08 23:01:19] HITS file was successfully produced:
[2025-10-08 23:01:19] -rw-------. 1 boincer umatlas 176760106 Oct  8 22:59 shared/HITS.pool.root.1
[2025-10-08 23:01:19]  *** Contents of shared directory: ***
[2025-10-08 23:01:19] total 384928
[2025-10-08 23:01:19] -rw-r--r--. 2 boincer umatlas 215404289 Oct  8 20:47 ATLAS.root_0
[2025-10-08 23:01:19] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 20:47 start_atlas.sh
[2025-10-08 23:01:19] -rw-r--r--. 2 boincer umatlas    565599 Oct  8 20:47 input.tar.gz
[2025-10-08 23:01:19] -rw-------. 1 boincer umatlas 176760106 Oct  8 22:59 HITS.pool.root.1
[2025-10-08 23:01:19] -rw-------. 1 boincer umatlas   1402880 Oct  8 23:01 result.tar.gz
23:01:21 (3132430): run_atlas exited; CPU time 30483.946807
23:01:21 (3132430): called boinc_finish(0)

</stderr_txt>
]]>

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