Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:27 (962959): wrapper (7.7.26015): starting
00:03:27 (962959): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 00:03:27] Arguments: --nthreads 12
[2025-10-09 00:03:27] Threads: 12
[2025-10-09 00:03:27] Checking for CVMFS
[2025-10-09 00:03:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 00:03:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 00:03:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 00:03:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 00:03:30] 2.13.2.0 239285 124437 262496 151495 1 291 26777057 32935937 19798 16776704 0 77159366 99.648 75090897 30669 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 00:03:30] CVMFS is ok
[2025-10-09 00:03:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 00:03:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 00:03:30] Further information can be found at the LHC@home message board.
[2025-10-09 00:03:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 00:03:30] Checking for apptainer binary...
[2025-10-09 00:03:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 00:03:30] Running /usr/bin/apptainer --version
[2025-10-09 00:03:30] apptainer version 1.4.3-1.el9
[2025-10-09 00:03:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 00:03:31] c-6-6.aglt2.org
[2025-10-09 00:03:31] apptainer works
[2025-10-09 00:03:31] Set ATHENA_PROC_NUMBER=12
[2025-10-09 00:03:31] Set ATHENA_CORE_NUMBER=12
[2025-10-09 00:03:31] Starting ATLAS job with PandaID=6836605998
[2025-10-09 00:03:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 07:58:58]  *** The last 200 lines of the pilot log: ***
[2025-10-09 07:58:58] 2025-10-09 11:58:09,516 | INFO     | time since job start (28390s) is within the limit (172800.0s)
[2025-10-09 07:58:58] 2025-10-09 11:58:09,560 | INFO     | monitor loop #1682: job 0:6836605998 is in state 'finished'
[2025-10-09 07:58:58] 2025-10-09 11:58:09,561 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 07:58:58] 2025-10-09 11:58:11,198 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-09 07:58:58] 2025-10-09 11:58:11,257 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1480000000006
[2025-10-09 07:58:58] 2025-10-09 11:58:11,293 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6836605998/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 07:58:58] 2025-10-09 11:58:11,294 | INFO     | extracted standard info from prmon json
[2025-10-09 07:58:58] 2025-10-09 11:58:11,294 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 07:58:58] 2025-10-09 11:58:11,294 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 07:58:58] 2025-10-09 11:58:11,294 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 07:58:58] 2025-10-09 11:58:11,294 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 07:58:58] 2025-10-09 11:58:11,303 | INFO     | fitting pss+swap vs Time
[2025-10-09 07:58:58] 2025-10-09 11:58:11,304 | INFO     | sum of square deviations: 30773169529.18352
[2025-10-09 07:58:58] 2025-10-09 11:58:11,310 | INFO     | sum of deviations: 480396376348.9053
[2025-10-09 07:58:58] 2025-10-09 11:58:11,310 | INFO     | mean x: 1759996958.062635
[2025-10-09 07:58:58] 2025-10-09 11:58:11,310 | INFO     | mean y: 2246766.5205183583
[2025-10-09 07:58:58] 2025-10-09 11:58:11,310 | INFO     | -- intersect: -27472861386.917027
[2025-10-09 07:58:58] 2025-10-09 11:58:11,310 | INFO     | intersect: -27472861386.917027
[2025-10-09 07:58:58] 2025-10-09 11:58:11,311 | INFO     | chi2: 6.7047520039445585
[2025-10-09 07:58:58] 2025-10-09 11:58:11,312 | INFO     | sum of square deviations: 29786937842.12237
[2025-10-09 07:58:58] 2025-10-09 11:58:11,317 | INFO     | sum of deviations: 509380489951.8643
[2025-10-09 07:58:58] 2025-10-09 11:58:11,318 | INFO     | mean x: 1759996805.5720525
[2025-10-09 07:58:58] 2025-10-09 11:58:11,318 | INFO     | mean y: 2251215.4737991267
[2025-10-09 07:58:58] 2025-10-09 11:58:11,318 | INFO     | -- intersect: -30095103534.03779
[2025-10-09 07:58:58] 2025-10-09 11:58:11,318 | INFO     | intersect: -30095103534.03779
[2025-10-09 07:58:58] 2025-10-09 11:58:11,319 | INFO     | chi2: 5.968081556795471
[2025-10-09 07:58:58] 2025-10-09 11:58:11,319 | INFO     | current chi2=5.968081556795471 (change=10.98728851888463 %)
[2025-10-09 07:58:58] 2025-10-09 11:58:11,319 | INFO     | right removable region: 457
[2025-10-09 07:58:58] 2025-10-09 11:58:11,319 | INFO     | sum of square deviations: 29786694086.12235
[2025-10-09 07:58:58] 2025-10-09 11:58:11,324 | INFO     | sum of deviations: 365193379271.86035
[2025-10-09 07:58:58] 2025-10-09 11:58:11,325 | INFO     | mean x: 1759997110.5720525
[2025-10-09 07:58:58] 2025-10-09 11:58:11,325 | INFO     | mean y: 2264554.4890829693
[2025-10-09 07:58:58] 2025-10-09 11:58:11,325 | INFO     | -- intersect: -21575802835.60678
[2025-10-09 07:58:58] 2025-10-09 11:58:11,325 | INFO     | intersect: -21575802835.60678
[2025-10-09 07:58:58] 2025-10-09 11:58:11,326 | INFO     | chi2: 3.936372181653994
[2025-10-09 07:58:58] 2025-10-09 11:58:11,326 | INFO     | current chi2=3.936372181653994 (change=41.289816844260066 %)
[2025-10-09 07:58:58] 2025-10-09 11:58:11,326 | INFO     | sum of square deviations: 28821577368.2957
[2025-10-09 07:58:58] 2025-10-09 11:58:11,331 | INFO     | sum of deviations: 300645366637.99567
[2025-10-09 07:58:58] 2025-10-09 11:58:11,331 | INFO     | mean x: 1759997263.0772626
[2025-10-09 07:58:58] 2025-10-09 11:58:11,332 | INFO     | mean y: 2274741.0286975717
[2025-10-09 07:58:58] 2025-10-09 11:58:11,332 | INFO     | -- intersect: -18356714278.83638
[2025-10-09 07:58:58] 2025-10-09 11:58:11,332 | INFO     | intersect: -18356714278.83638
[2025-10-09 07:58:58] 2025-10-09 11:58:11,332 | INFO     | chi2: 3.176096509179782
[2025-10-09 07:58:58] 2025-10-09 11:58:11,332 | INFO     | current chi2=3.176096509179782 (change=19.31412065194398 %)
[2025-10-09 07:58:58] 2025-10-09 11:58:11,332 | INFO     | left removable region: 20
[2025-10-09 07:58:58] 2025-10-09 11:58:11,333 | INFO     | sum of square deviations: 25873986962.33871
[2025-10-09 07:58:58] 2025-10-09 11:58:11,337 | INFO     | sum of deviations: 208256987661.904
[2025-10-09 07:58:58] 2025-10-09 11:58:11,338 | INFO     | mean x: 1759997385.0915332
[2025-10-09 07:58:58] 2025-10-09 11:58:11,338 | INFO     | mean y: 2300057.352402746
[2025-10-09 07:58:58] 2025-10-09 11:58:11,338 | INFO     | -- intersect: -14163732964.365578
[2025-10-09 07:58:58] 2025-10-09 11:58:11,338 | INFO     | intersect: -14163732964.365578
[2025-10-09 07:58:58] 2025-10-09 11:58:11,339 | INFO     | chi2: 1.0152137923570677
[2025-10-09 07:58:58] 2025-10-09 11:58:11,339 | INFO     | -- intersect: -14163732964.365578
[2025-10-09 07:58:58] 2025-10-09 11:58:11,339 | INFO     | current memory leak: 8.05 B/s (using 437 data points, chi2=1.02)
[2025-10-09 07:58:58] 2025-10-09 11:58:11,340 | INFO     | could have reported an average CPU frequency of 2601 MHz (19 samples)
[2025-10-09 07:58:58] 2025-10-09 11:58:11,340 | INFO     | ..............................
[2025-10-09 07:58:58] 2025-10-09 11:58:11,340 | INFO     | . Timing measurements:
[2025-10-09 07:58:58] 2025-10-09 11:58:11,340 | INFO     | . get job = 1 s
[2025-10-09 07:58:58] 2025-10-09 11:58:11,340 | INFO     | . initial setup = 9 s
[2025-10-09 07:58:58] 2025-10-09 11:58:11,340 | INFO     | . payload setup = 47 s
[2025-10-09 07:58:58] 2025-10-09 11:58:11,340 | INFO     | . stage-in = 1 s
[2025-10-09 07:58:58] 2025-10-09 11:58:11,340 | INFO     | . payload execution = 28214 s
[2025-10-09 07:58:58] 2025-10-09 11:58:11,340 | INFO     | . stage-out = 5 s
[2025-10-09 07:58:58] 2025-10-09 11:58:11,340 | INFO     | . log creation = 0 s
[2025-10-09 07:58:58] 2025-10-09 11:58:11,341 | INFO     | ..............................
[2025-10-09 07:58:58] 2025-10-09 11:58:11,437 | INFO     | 
[2025-10-09 07:58:58] 2025-10-09 11:58:11,438 | INFO     | job summary report
[2025-10-09 07:58:58] 2025-10-09 11:58:11,438 | INFO     | --------------------------------------------------
[2025-10-09 07:58:58] 2025-10-09 11:58:11,438 | INFO     | PanDA job id: 6836605998
[2025-10-09 07:58:58] 2025-10-09 11:58:11,438 | INFO     | task id: 46676269
[2025-10-09 07:58:58] 2025-10-09 11:58:11,438 | INFO     | errors: (none)
[2025-10-09 07:58:58] 2025-10-09 11:58:11,438 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 07:58:58] 2025-10-09 11:58:11,438 | INFO     | pilot state: finished 
[2025-10-09 07:58:58] 2025-10-09 11:58:11,438 | INFO     | transexitcode: 0
[2025-10-09 07:58:58] 2025-10-09 11:58:11,438 | INFO     | exeerrorcode: 0
[2025-10-09 07:58:58] 2025-10-09 11:58:11,439 | INFO     | exeerrordiag: 
[2025-10-09 07:58:58] 2025-10-09 11:58:11,439 | INFO     | exitcode: 0
[2025-10-09 07:58:58] 2025-10-09 11:58:11,439 | INFO     | exitmsg: OK
[2025-10-09 07:58:58] 2025-10-09 11:58:11,439 | INFO     | cpuconsumptiontime: 51124 s
[2025-10-09 07:58:58] 2025-10-09 11:58:11,439 | INFO     | nevents: 400
[2025-10-09 07:58:58] 2025-10-09 11:58:11,439 | INFO     | neventsw: 0
[2025-10-09 07:58:58] 2025-10-09 11:58:11,439 | INFO     | pid: 984307
[2025-10-09 07:58:58] 2025-10-09 11:58:11,439 | INFO     | pgrp: 984307
[2025-10-09 07:58:58] 2025-10-09 11:58:11,439 | INFO     | corecount: 12
[2025-10-09 07:58:58] 2025-10-09 11:58:11,439 | INFO     | event service: False
[2025-10-09 07:58:58] 2025-10-09 11:58:11,439 | INFO     | sizes: {0: 2348027, 1: 2348712, 2: 2348740, 3: 2348939, 15: 2348939, 27: 2348967, 38: 2349123, 45: 2349413, 50: 2349441, 28268: 2381225, 28275: 2390223, 28279: 239
[2025-10-09 07:58:58] 2025-10-09 11:58:11,440 | INFO     | --------------------------------------------------
[2025-10-09 07:58:58] 2025-10-09 11:58:11,440 | INFO     | 
[2025-10-09 07:58:58] 2025-10-09 11:58:11,440 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-09 07:58:58] 2025-10-09 11:58:11,469 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,470 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,470 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,470 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,470 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,470 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,470 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,471 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,471 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,471 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,471 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,471 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,471 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,472 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,472 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,472 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,472 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 07:58:58] 2025-10-09 11:58:11,472 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,472 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 07:58:58] 2025-10-09 11:58:11,473 | INFO     | job 6836605998 has completed (purged errors)
[2025-10-09 07:58:58] 2025-10-09 11:58:11,473 | INFO     | overall cleanup function is called
[2025-10-09 07:58:58] 2025-10-09 11:58:12,482 | INFO     | --- collectZombieJob: --- 10, [984307]
[2025-10-09 07:58:58] 2025-10-09 11:58:12,483 | INFO     | zombie collector waiting for pid 984307
[2025-10-09 07:58:58] 2025-10-09 11:58:12,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 07:58:58] 2025-10-09 11:58:12,483 | INFO     | collected zombie processes
[2025-10-09 07:58:58] 2025-10-09 11:58:12,483 | INFO     | will attempt to kill all subprocesses of pid=984307
[2025-10-09 07:58:58] 2025-10-09 11:58:13,839 | INFO     | process IDs to be killed: [984307] (in reverse order)
[2025-10-09 07:58:58] 2025-10-09 11:58:14,532 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 07:58:58] 2025-10-09 11:58:14,533 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 07:58:58] 2025-10-09 11:58:14,641 | INFO     | did not find any defunct processes belonging to 984307
[2025-10-09 07:58:58] 2025-10-09 11:58:14,814 | INFO     | did not find any defunct processes belonging to 984307
[2025-10-09 07:58:58] 2025-10-09 11:58:14,814 | INFO     | ready for new job
[2025-10-09 07:58:58] 2025-10-09 11:58:14,815 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 07:58:58] 2025-10-09 11:58:14,869 | INFO     | ***************************************
[2025-10-09 07:58:58] 2025-10-09 11:58:14,869 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 07:58:58] 2025-10-09 11:58:14,869 | INFO     | ***************************************
[2025-10-09 07:58:58] 2025-10-09 11:58:14,869 | INFO     | 
[2025-10-09 07:58:58] 2025-10-09 11:58:14,891 | INFO     | architecture information:
[2025-10-09 07:58:58] 2025-10-09 11:58:14,918 | INFO     | executing command: cat /etc/os-release
[2025-10-09 07:58:58] 2025-10-09 11:58:15,089 | INFO     | cat /etc/os-release:
[2025-10-09 07:58:58] NAME="CentOS Linux"
[2025-10-09 07:58:58] VERSION="7 (Core)"
[2025-10-09 07:58:58] ID="centos"
[2025-10-09 07:58:58] ID_LIKE="rhel fedora"
[2025-10-09 07:58:58] VERSION_ID="7"
[2025-10-09 07:58:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 07:58:58] ANSI_COLOR="0;31"
[2025-10-09 07:58:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 07:58:58] HOME_URL="https://www.centos.org/"
[2025-10-09 07:58:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 07:58:58] 
[2025-10-09 07:58:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 07:58:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 07:58:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 07:58:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 07:58:58] 
[2025-10-09 07:58:58] 2025-10-09 11:58:15,089 | INFO     | ***************************************
[2025-10-09 07:58:58] 2025-10-09 11:58:15,598 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-09 07:58:58] 2025-10-09 11:58:15,725 | INFO     | sufficient remaining disk space (76075237376 B)
[2025-10-09 07:58:58] 2025-10-09 11:58:15,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 07:58:58] 2025-10-09 11:58:15,726 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 07:58:58] 2025-10-09 11:58:15,726 | INFO     | update_server=False
[2025-10-09 07:58:58] 2025-10-09 11:58:15,726 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 07:58:58] 2025-10-09 11:58:15,726 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 07:58:58] 2025-10-09 11:58:15,727 | INFO     | aborting loop
[2025-10-09 07:58:58] 2025-10-09 11:58:15,954 | INFO     | all data control threads have been joined
[2025-10-09 07:58:58] 2025-10-09 11:58:15,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 07:58:58] 2025-10-09 11:58:16,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 07:58:58] 2025-10-09 11:58:16,488 | INFO     | all payload control threads have been joined
[2025-10-09 07:58:58] 2025-10-09 11:58:16,588 | INFO     | all job control threads have been joined
[2025-10-09 07:58:58] 2025-10-09 11:58:16,733 | INFO     | [job] job monitor thread has finished
[2025-10-09 07:58:58] 2025-10-09 11:58:16,734 | INFO     | [job] retrieve thread has finished
[2025-10-09 07:58:58] 2025-10-09 11:58:16,960 | INFO     | [data] control thread has finished
[2025-10-09 07:58:58] 2025-10-09 11:58:17,031 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 07:58:58] 2025-10-09 11:58:17,218 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 07:58:58] 2025-10-09 11:58:17,476 | INFO     | [job] queue monitor thread has finished
[2025-10-09 07:58:58] 2025-10-09 11:58:17,495 | INFO     | [payload] control thread has finished
[2025-10-09 07:58:58] 2025-10-09 11:58:17,595 | INFO     | [job] control thread has finished
[2025-10-09 07:58:58] 2025-10-09 11:58:17,870 | INFO     | [job] validate thread has finished
[2025-10-09 07:58:58] 2025-10-09 11:58:17,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 07:58:58] 2025-10-09 11:58:17,988 | INFO     | [data] copytool_out thread has finished
[2025-10-09 07:58:58] 2025-10-09 11:58:18,035 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 07:58:58] 2025-10-09 11:58:18,051 | INFO     | [payload] validate_post thread has finished
[2025-10-09 07:58:58] 2025-10-09 11:58:18,119 | INFO     | [payload] failed_post thread has finished
[2025-10-09 07:58:58] 2025-10-09 11:58:18,231 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 07:58:58] 2025-10-09 11:58:18,237 | INFO     | [data] copytool_in thread has finished
[2025-10-09 07:58:58] 2025-10-09 11:58:21,933 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 07:58:58] 2025-10-09 11:58:44,877 | INFO     | PID=975479 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 07:58:58] 2025-10-09 11:58:44,878 | INFO     | .. there are 34 such processes running
[2025-10-09 07:58:58] 2025-10-09 11:58:44,879 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 07:58:58] 2025-10-09 11:58:44,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 07:58:58] 2025-10-09 11:58:44,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 07:58:58] 2025-10-09 11:58:48,893 | INFO     | [monitor] cgroup control has ended
[2025-10-09 07:58:58] 2025-10-09 11:58:50,503 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350136895296)>', '<ExcThread(monitor, started 140349615871744)>']
[2025-10-09 07:58:58] 2025-10-09 11:58:50,934 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 07:58:58] 2025-10-09 11:58:50,935 | INFO     | [monitor] control thread has ended
[2025-10-09 07:58:58] 2025-10-09 11:58:55,528 | INFO     | all workflow threads have been joined
[2025-10-09 07:58:58] 2025-10-09 11:58:55,529 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 07:58:58] 2025-10-09 11:58:55,529 | INFO     | traces error code: 0
[2025-10-09 07:58:58] 2025-10-09 11:58:55,529 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 07:58:58] 2025-10-09 11:58:57,121 [wrapper] ==== pilot stdout END ====
[2025-10-09 07:58:58] 2025-10-09 11:58:57,171 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 07:58:58] 2025-10-09 11:58:57,217 [wrapper] pilotpid: 975479
[2025-10-09 07:58:58] 2025-10-09 11:58:57,267 [wrapper] Pilot exit status: 0
[2025-10-09 07:58:58] 2025-10-09 11:58:57,378 [wrapper] pandaids: 6836605998
[2025-10-09 07:58:58] 2025-10-09 11:58:57,670 [wrapper] cleanup supervisor_pilot 2430893 975480
[2025-10-09 07:58:58] 2025-10-09 11:58:57,673 [wrapper] Test setup, not cleaning
[2025-10-09 07:58:58] 2025-10-09 11:58:57,690 [wrapper] apfmon messages muted
[2025-10-09 07:58:58] 2025-10-09 11:58:57,706 [wrapper] ==== wrapper stdout END ====
[2025-10-09 07:58:58] 2025-10-09 11:58:57,738 [wrapper] ==== wrapper stderr END ====
[2025-10-09 07:58:58]  *** Error codes and diagnostics ***
[2025-10-09 07:58:58]     "exeErrorCode": 0,
[2025-10-09 07:58:58]     "exeErrorDiag": "",
[2025-10-09 07:58:58]     "pilotErrorCode": 0,
[2025-10-09 07:58:58]     "pilotErrorDiag": "",
[2025-10-09 07:58:58]  *** Listing of results directory ***
[2025-10-09 07:58:58] total 417092
[2025-10-09 07:58:58] -rw-r--r--. 1 boincer umatlas    557409 Oct  8 19:22 pilot3.tar.gz
[2025-10-09 07:58:58] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 19:29 queuedata.json
[2025-10-09 07:58:58] -rwx------. 1 boincer umatlas     36292 Oct  8 19:31 runpilot2-wrapper.sh
[2025-10-09 07:58:58] -rw-r--r--. 1 boincer umatlas       100 Oct  9 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 07:58:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 00:03 run_atlas
[2025-10-09 07:58:58] -rw-r--r--. 1 boincer umatlas       105 Oct  9 00:03 job.xml
[2025-10-09 07:58:58] -rw-r--r--. 2 boincer umatlas 218032756 Oct  9 00:03 EVNT.46676267._000452.pool.root.1
[2025-10-09 07:58:58] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 00:03 start_atlas.sh
[2025-10-09 07:58:58] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 00:03 shared
[2025-10-09 07:58:58] -rw-r--r--. 2 boincer umatlas    569676 Oct  9 00:03 input.tar.gz
[2025-10-09 07:58:58] -rw-r--r--. 1 boincer umatlas         0 Oct  9 00:03 boinc_lockfile
[2025-10-09 07:58:58] -rw-r--r--. 1 boincer umatlas      2549 Oct  9 00:03 pandaJob.out
[2025-10-09 07:58:58] -rw-------. 1 boincer umatlas    979306 Oct  9 00:04 agis_schedconf.cvmfs.json
[2025-10-09 07:58:58] drwx------. 5 boincer umatlas      4096 Oct  9 00:05 pilot3
[2025-10-09 07:58:58] -rw-r--r--. 1 boincer umatlas      6659 Oct  9 07:55 init_data.xml
[2025-10-09 07:58:58] -rw-------. 1 boincer umatlas 196822653 Oct  9 07:56 HITS.46676269._011082.pool.root.1
[2025-10-09 07:58:58] -rw-r--r--. 1 boincer umatlas       531 Oct  9 07:56 boinc_task_state.xml
[2025-10-09 07:58:58] -rw-------. 1 boincer umatlas      1042 Oct  9 07:57 memory_monitor_summary.json
[2025-10-09 07:58:58] -rw-------. 1 boincer umatlas   1560401 Oct  9 07:57 agis_ddmendpoints.agis.ALL.json
[2025-10-09 07:58:58] -rw-------. 1 boincer umatlas    696564 Oct  9 07:57 log.46676269._011082.job.log.tgz.1
[2025-10-09 07:58:58] -rw-------. 1 boincer umatlas      6207 Oct  9 07:58 heartbeat.json
[2025-10-09 07:58:58] -rw-------. 1 boincer umatlas        95 Oct  9 07:58 pilot_heartbeat.json
[2025-10-09 07:58:58] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 07:58 boinc_mmap_file
[2025-10-09 07:58:58] -rw-------. 1 boincer umatlas      4823 Oct  9 07:58 pilotlog.txt
[2025-10-09 07:58:58] -rw-r--r--. 1 boincer umatlas        28 Oct  9 07:58 wrapper_checkpoint.txt
[2025-10-09 07:58:58] -rw-------. 1 boincer umatlas   3475637 Oct  9 07:58 log.46676269._011082.job.log.1
[2025-10-09 07:58:58] -rw-------. 1 boincer umatlas       357 Oct  9 07:58 output.list
[2025-10-09 07:58:58] -rw-r--r--. 1 boincer umatlas       620 Oct  9 07:58 runtime_log
[2025-10-09 07:58:58] -rw-------. 1 boincer umatlas   4188160 Oct  9 07:58 result.tar.gz
[2025-10-09 07:58:58] -rw-------. 1 boincer umatlas       655 Oct  9 07:58 YloKDmNosQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlrYNDmSa9UMm.diag
[2025-10-09 07:58:58] -rw-r--r--. 1 boincer umatlas      8691 Oct  9 07:58 runtime_log.err
[2025-10-09 07:58:58] -rw-r--r--. 1 boincer umatlas     21241 Oct  9 07:58 stderr.txt
[2025-10-09 07:58:58] HITS file was successfully produced:
[2025-10-09 07:58:58] -rw-------. 1 boincer umatlas 196822653 Oct  9 07:56 shared/HITS.pool.root.1
[2025-10-09 07:58:58]  *** Contents of shared directory: ***
[2025-10-09 07:58:58] total 409808
[2025-10-09 07:58:58] -rw-r--r--. 2 boincer umatlas 218032756 Oct  9 00:03 ATLAS.root_0
[2025-10-09 07:58:58] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 00:03 start_atlas.sh
[2025-10-09 07:58:58] -rw-r--r--. 2 boincer umatlas    569676 Oct  9 00:03 input.tar.gz
[2025-10-09 07:58:58] -rw-------. 1 boincer umatlas 196822653 Oct  9 07:56 HITS.pool.root.1
[2025-10-09 07:58:58] -rw-------. 1 boincer umatlas   4188160 Oct  9 07:58 result.tar.gz
07:58:59 (962959): run_atlas exited; CPU time 52032.570706
07:58:59 (962959): called boinc_finish(0)

</stderr_txt>
]]>

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