Stderr output

<core_client_version>7.16.19</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-09 02:31:25 (94391): vboxwrapper version 26210
2025-10-09 02:31:25 (94391): BOINC client version: 7.16.19
2025-10-09 02:31:25 (94391): Detected: VirtualBox VboxManage Interface (Version: 5.0.26)
2025-10-09 02:31:25 (94391): Detected: Sandbox Configuration Enabled
2025-10-09 02:31:25 (94391): Successfully copied 'init_data.xml' to the shared directory.
2025-10-09 02:31:25 (94391): Create VM. (boinc_64cefa61bb089ff1, slot#0)
2025-10-09 02:31:25 (94391): Setting Memory Size for VM. (4200MB)
2025-10-09 02:31:25 (94391): Setting CPU Count for VM. (2)
2025-10-09 02:31:25 (94391): Setting Chipset Options for VM.
2025-10-09 02:31:25 (94391): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-09 02:31:25 (94391): Setting Boot Options for VM.
2025-10-09 02:31:25 (94391): Setting Network Configuration for NAT. (Driver: 82540EM)
2025-10-09 02:31:25 (94391): Enabling VM Network Access.
2025-10-09 02:31:25 (94391): Disabling USB Support for VM.
2025-10-09 02:31:25 (94391): Disabling COM Port Support for VM.
2025-10-09 02:31:25 (94391): Disabling Audio Support for VM.
2025-10-09 02:31:25 (94391): Disabling Clipboard Support for VM.
2025-10-09 02:31:25 (94391): Disabling Drag and Drop Support for VM.
2025-10-09 02:31:26 (94391): Adding storage controller(s) to VM.
2025-10-09 02:31:26 (94391): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-09 02:31:26 (94391): Adding VirtualBox Guest Additions to VM.
2025-10-09 02:31:26 (94391): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-09 02:31:26 (94391): forwarding host port 58728 to guest port 80
2025-10-09 02:31:26 (94391): Enabling remote desktop for VM.
2025-10-09 02:31:26 (94391): Required extension pack not installed, remote desktop not enabled.
2025-10-09 02:31:26 (94391): Enabling shared directory for VM.
2025-10-09 02:31:26 (94391): Starting VM using VBoxManage interface. (boinc_64cefa61bb089ff1, slot#0)
2025-10-09 02:31:27 (94391): Successfully started VM. (PID = '94451')
2025-10-09 02:31:27 (94391): Reporting VM Process ID to BOINC.
2025-10-09 02:31:27 (94391): Guest Log: BIOS: VirtualBox 5.0.26
2025-10-09 02:31:27 (94391): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-09 02:31:27 (94391): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-09 02:31:27 (94391): Detected: Web Application Enabled (http://localhost:58728)
2025-10-09 02:31:27 (94391): Preference change detected
2025-10-09 02:31:27 (94391): Setting CPU throttle for VM. (90%)
2025-10-09 02:31:27 (94391): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 02:31:29 (94391): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-09 02:31:29 (94391): Guest Log: BIOS: Booting from Hard Disk...
2025-10-09 02:31:32 (94391): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-09 02:31:32 (94391): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-09 02:31:32 (94391): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-09 02:31:38 (94391): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-09 02:31:38 (94391): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-09 02:31:49 (94391): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-09 02:31:49 (94391): Guest Log: 00:00:00.000244 main     Log opened 2025-10-09T00:31:48.348398000Z
2025-10-09 02:31:49 (94391): Guest Log: 00:00:00.000382 main     OS Product: Linux
2025-10-09 02:31:49 (94391): Guest Log: 00:00:00.000438 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-09 02:31:49 (94391): Guest Log: 00:00:00.000489 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-09 02:31:49 (94391): Guest Log: 00:00:00.000540 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-09 02:31:49 (94391): Guest Log: 00:00:00.000541 main     Process ID: 1262
2025-10-09 02:31:49 (94391): Guest Log: 00:00:00.000542 main     Package type: LINUX_64BITS_GENERIC
2025-10-09 02:31:49 (94391): Guest Log: 00:00:00.002659 main     5.2.32 r132073 started. Verbose level = 0
2025-10-09 02:31:49 (94391): Guest Log: 00:00:00.004794 main     Error: Service 'control' failed to initialize: VERR_INVALID_PARAMETER
2025-10-09 02:31:49 (94391): Guest Log: 00:00:00.005008 main     Session 0 is about to close ...
2025-10-09 02:31:49 (94391): Guest Log: 00:00:00.005060 main     Stopping all guest processes ...
2025-10-09 02:31:49 (94391): Guest Log: 00:00:00.005112 main     Closing all guest files ...
2025-10-09 02:31:49 (94391): Guest Log: 00:00:00.006415 main     Ended.
2025-10-09 02:31:50 (94391): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-09 02:31:50 (94391): Guest Log: [INFO] Mounting shared directory
2025-10-09 02:31:50 (94391): Guest Log: [INFO] Checking for init_data.xml
2025-10-09 02:31:55 (94391): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-09 02:31:55 (94391): Guest Log: [INFO] Detected branch: prod
2025-10-09 02:31:55 (94391): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-09 02:31:55 (94391): Guest Log: Copying input files
2025-10-09 02:31:57 (94391): Guest Log: Copied input files into RunAtlas.
2025-10-09 02:31:57 (94391): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-09 02:31:57 (94391): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-09 02:31:57 (94391): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-09 02:31:57 (94391): Guest Log: Further information can be found at the LHC@home message board.
2025-10-09 02:32:06 (94391): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-09 02:32:06 (94391): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-09 02:32:06 (94391): Guest Log: 2.6.3.0 1530 0 32080 151490 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-09 02:32:07 (94391): Guest Log: copied the webapp to /var/www
2025-10-09 02:32:07 (94391): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-09 02:32:07 (94391): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-09 02:32:08 (94391): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-09 02:32:08 (94391): Guest Log:  *** Starting ATLAS job. (PandaID=6836605327 taskID=46676269) ***
2025-10-09 04:11:02 (94391): Status Report: Elapsed Time: '6000.000000'
2025-10-09 04:11:02 (94391): Status Report: CPU Time: '9935.810000'
2025-10-09 05:50:37 (94391): Status Report: Elapsed Time: '12000.000000'
2025-10-09 05:50:37 (94391): Status Report: CPU Time: '20569.510000'
2025-10-09 07:30:12 (94391): Status Report: Elapsed Time: '18000.000000'
2025-10-09 07:30:12 (94391): Status Report: CPU Time: '31204.560000'
2025-10-09 09:09:46 (94391): Status Report: Elapsed Time: '24000.000000'
2025-10-09 09:09:46 (94391): Status Report: CPU Time: '41836.450000'
2025-10-09 10:49:20 (94391): Status Report: Elapsed Time: '30000.000000'
2025-10-09 10:49:20 (94391): Status Report: CPU Time: '52468.940000'
2025-10-09 11:35:04 (94391): Guest Log:  *** Job finished ***
2025-10-09 11:35:04 (94391): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:34:55,604 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:34:55,604 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:34:56,101 | INFO     | [monitor] cgroup control has ended
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:34:57,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140346341762880)>', '<ExcThread(monitor, started 140345757128448)>']
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:34:58,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:34:58,611 | INFO     | [monitor] control thread has ended
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:35:02,726 | INFO     | all workflow threads have been joined
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:35:02,727 | INFO     | end of generic workflow (traces error code: 0)
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:35:02,728 | INFO     | traces error code: 0
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:35:02,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:35:02,860 [wrapper] ==== pilot stdout END ====
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:35:02,869 [wrapper] ==== wrapper stdout RESUME ====
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:35:02,876 [wrapper] pilotpid: 5899
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:35:02,882 [wrapper] Pilot exit status: 0
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:35:02,998 [wrapper] pandaids: 6836605327
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:35:03,054 [wrapper] cleanup supervisor_pilot 10896 5900
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:35:03,060 [wrapper] Test setup, not cleaning
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:35:03,067 [wrapper] apfmon messages muted
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:35:03,076 [wrapper] ==== wrapper stdout END ====
2025-10-09 11:35:04 (94391): Guest Log: 2025-10-09 09:35:03,084 [wrapper] ==== wrapper stderr END ====
2025-10-09 11:35:04 (94391): Guest Log:  *** Error codes and diagnostics ***
2025-10-09 11:35:04 (94391): Guest Log:     "exeErrorCode": 0,
2025-10-09 11:35:04 (94391): Guest Log:     "exeErrorDiag": "",
2025-10-09 11:35:04 (94391): Guest Log:     "pilotErrorCode": 0,
2025-10-09 11:35:04 (94391): Guest Log:     "pilotErrorDiag": "",
2025-10-09 11:35:04 (94391): Guest Log:  *** Listing of results directory ***
2025-10-09 11:35:04 (94391): Guest Log: total 200688
2025-10-09 11:35:04 (94391): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  8 22:57 pilot3.tar.gz
2025-10-09 11:35:04 (94391): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  8 23:21 runpilot2-wrapper.sh
2025-10-09 11:35:04 (94391): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  8 23:21 queuedata.json
2025-10-09 11:35:04 (94391): Guest Log: -rw-r--r--. 1 atlas atlas      8378 Oct  9 00:31 init_data.xml
2025-10-09 11:35:04 (94391): Guest Log: -rw-r-----. 1 atlas atlas    569678 Oct  9 00:31 input.tar.gz
2025-10-09 11:35:04 (94391): Guest Log: -rw-r-----. 1 atlas atlas     15120 Oct  9 00:31 start_atlas.sh
2025-10-09 11:35:04 (94391): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  9 00:31 EVNT.46676267._000439.pool.root.1 -> /data/./ATLAS.root_0
2025-10-09 11:35:04 (94391): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct  9 00:32 pandaJob.out
2025-10-09 11:35:04 (94391): Guest Log: -rw-------. 1 atlas atlas    979298 Oct  9 00:33 agis_schedconf.cvmfs.json
2025-10-09 11:35:04 (94391): Guest Log: drwx------. 5 atlas atlas      4096 Oct  9 00:33 pilot3
2025-10-09 11:35:04 (94391): Guest Log: -rw-------. 1 atlas atlas 191797054 Oct  9 09:33 HITS.46676269._010810.pool.root.1
2025-10-09 11:35:04 (94391): Guest Log: -rw-------. 1 atlas atlas      1030 Oct  9 09:33 memory_monitor_summary.json
2025-10-09 11:35:04 (94391): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  9 09:34 agis_ddmendpoints.agis.ALL.json
2025-10-09 11:35:04 (94391): Guest Log: -rw-------. 1 atlas atlas    607786 Oct  9 09:34 log.46676269._010810.job.log.tgz.1
2025-10-09 11:35:04 (94391): Guest Log: -rw-------. 1 atlas atlas        95 Oct  9 09:34 pilot_heartbeat.json
2025-10-09 11:35:04 (94391): Guest Log: -rw-------. 1 atlas atlas      7816 Oct  9 09:34 heartbeat.json
2025-10-09 11:35:04 (94391): Guest Log: -rw-------. 1 atlas atlas      4877 Oct  9 09:35 pilotlog.txt
2025-10-09 11:35:04 (94391): Guest Log: -rw-------. 1 atlas atlas   4326633 Oct  9 09:35 log.46676269._010810.job.log.1
2025-10-09 11:35:04 (94391): Guest Log: -rw-------. 1 atlas atlas       357 Oct  9 09:35 output.list
2025-10-09 11:35:04 (94391): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  9 09:35 runtime_log
2025-10-09 11:35:04 (94391): Guest Log: -rw-------. 1 atlas atlas   4956160 Oct  9 09:35 result.tar.gz
2025-10-09 11:35:04 (94391): Guest Log: -rw-r--r--. 1 atlas atlas      8661 Oct  9 09:35 runtime_log.err
2025-10-09 11:35:04 (94391): Guest Log: -rw-------. 1 atlas atlas       667 Oct  9 09:35 4cQNDmSesQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcoYNDmegbS3m.diag
2025-10-09 11:35:04 (94391): Guest Log: Looking for outputfile HITS.46676269._010810.pool.root.1
2025-10-09 11:35:04 (94391): Guest Log: HITS file was successfully produced
2025-10-09 11:35:04 (94391): Guest Log: -rw-------. 1 atlas atlas 191797054 Oct  9 09:33 /home/atlas/RunAtlas/HITS.46676269._010810.pool.root.1
2025-10-09 11:35:05 (94391): Guest Log: Successfully finished the ATLAS job!
2025-10-09 11:35:05 (94391): Guest Log: Copying the results back to the shared directory!
2025-10-09 11:35:05 (94391): Guest Log:  *** Contents of shared directory: ***
2025-10-09 11:35:05 (94391): Guest Log: total 218236
2025-10-09 11:35:05 (94391): Guest Log: -rw-rw----. 1 root root 217912915 Oct  9 00:31 ATLAS.root_0
2025-10-09 11:35:05 (94391): Guest Log: -rw-rw-r--. 1 root root      8378 Oct  9 00:31 init_data.xml
2025-10-09 11:35:05 (94391): Guest Log: -rw-rw----. 1 root root    569678 Oct  9 00:31 input.tar.gz
2025-10-09 11:35:05 (94391): Guest Log: -rw-r--r--. 1 root root   4956160 Oct  9  2025 result.tar.gz
2025-10-09 11:35:05 (94391): Guest Log: -rw-rw----. 1 root root     15120 Oct  9 00:31 start_atlas.sh
2025-10-09 11:35:05 (94391): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-09 11:35:05 (94391): VM Completion File Detected.
2025-10-09 11:35:05 (94391): Powering off VM.
2025-10-09 11:35:05 (94391): Successfully stopped VM.
2025-10-09 11:35:05 (94391): Deregistering VM. (boinc_64cefa61bb089ff1, slot#0)
2025-10-09 11:35:05 (94391): Removing network bandwidth throttle group from VM.
2025-10-09 11:35:05 (94391): Removing VM from VirtualBox.
2025-10-09 11:35:10 (94391): called boinc_finish(0)

</stderr_txt>
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