Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
06:33:11 (205030): wrapper (7.7.26015): starting
06:33:11 (205030): wrapper: running run_atlas (--nthreads 6)
[2025-10-09 06:33:11] Arguments: --nthreads 6
[2025-10-09 06:33:11] Threads: 6
[2025-10-09 06:33:11] Checking for CVMFS
[2025-10-09 06:33:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 06:33:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 06:33:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 06:33:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 06:33:12] 2.11.5.0 165367 256 47760 151496 3 57 3095906 4096000 0 130560 0 102642 99.971 10701 1360 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-09 06:33:12] CVMFS is ok
[2025-10-09 06:33:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 06:33:12] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-09 06:33:12] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-09 06:33:12] Further information can be found at the LHC@home message board.
[2025-10-09 06:33:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 06:33:12] Checking for apptainer binary...
[2025-10-09 06:33:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 06:33:12] Running /usr/bin/apptainer --version
[2025-10-09 06:33:12] apptainer version 1.4.2-1.fc42
[2025-10-09 06:33:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 06:33:12] S15L
[2025-10-09 06:33:12] apptainer works
[2025-10-09 06:33:12] Set ATHENA_PROC_NUMBER=6
[2025-10-09 06:33:12] Set ATHENA_CORE_NUMBER=6
[2025-10-09 06:33:12] Starting ATLAS job with PandaID=6836604620
[2025-10-09 06:33:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 10:44:47]  *** The last 200 lines of the pilot log: ***
[2025-10-09 10:44:47] 2025-10-09 08:43:56,452 | INFO     | time since job start (15037s) is within the limit (172800.0s)
[2025-10-09 10:44:47] 2025-10-09 08:43:57,403 | INFO     | monitor loop #1112: job 0:6836604620 is in state 'finished'
[2025-10-09 10:44:47] 2025-10-09 08:43:57,403 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 10:44:47] 2025-10-09 08:43:58,458 | INFO     | time since job start (15039s) is within the limit (172800.0s)
[2025-10-09 10:44:47] 2025-10-09 08:43:59,188 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-09 10:44:47] 2025-10-09 08:43:59,190 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 2955.32625
[2025-10-09 10:44:47] 2025-10-09 08:43:59,191 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6836604620/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 10:44:47] 2025-10-09 08:43:59,191 | INFO     | extracted standard info from prmon json
[2025-10-09 10:44:47] 2025-10-09 08:43:59,191 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 10:44:47] 2025-10-09 08:43:59,191 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 10:44:47] 2025-10-09 08:43:59,192 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 10:44:47] 2025-10-09 08:43:59,192 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 10:44:47] 2025-10-09 08:43:59,195 | INFO     | fitting pss+swap vs Time
[2025-10-09 10:44:47] 2025-10-09 08:43:59,195 | INFO     | sum of square deviations: 4616114457.5
[2025-10-09 10:44:47] 2025-10-09 08:43:59,196 | INFO     | sum of deviations: -70269518336.99998
[2025-10-09 10:44:47] 2025-10-09 08:43:59,196 | INFO     | mean x: 1759991891.5
[2025-10-09 10:44:47] 2025-10-09 08:43:59,197 | INFO     | mean y: 2496695.138211382
[2025-10-09 10:44:47] 2025-10-09 08:43:59,197 | INFO     | -- intersect: 26794246256.675278
[2025-10-09 10:44:47] 2025-10-09 08:43:59,197 | INFO     | intersect: 26794246256.675278
[2025-10-09 10:44:47] 2025-10-09 08:43:59,197 | INFO     | chi2: 1.5720128289163617
[2025-10-09 10:44:47] 2025-10-09 08:43:59,197 | INFO     | sum of square deviations: 4340323240.0
[2025-10-09 10:44:47] 2025-10-09 08:43:59,198 | INFO     | sum of deviations: -68319400125.99999
[2025-10-09 10:44:47] 2025-10-09 08:43:59,198 | INFO     | mean x: 1759991739.0
[2025-10-09 10:44:47] 2025-10-09 08:43:59,199 | INFO     | mean y: 2497773.622406639
[2025-10-09 10:44:47] 2025-10-09 08:43:59,199 | INFO     | -- intersect: 27705867588.815144
[2025-10-09 10:44:47] 2025-10-09 08:43:59,199 | INFO     | intersect: 27705867588.815144
[2025-10-09 10:44:47] 2025-10-09 08:43:59,199 | INFO     | chi2: 1.566350049663381
[2025-10-09 10:44:47] 2025-10-09 08:43:59,199 | INFO     | current chi2=1.566350049663381 (change=0.3602247480947198 %)
[2025-10-09 10:44:47] 2025-10-09 08:43:59,199 | INFO     | right removable region: 240
[2025-10-09 10:44:47] 2025-10-09 08:43:59,199 | INFO     | sum of square deviations: 4340323240.0
[2025-10-09 10:44:47] 2025-10-09 08:43:59,201 | INFO     | sum of deviations: -92050974631.00002
[2025-10-09 10:44:47] 2025-10-09 08:43:59,201 | INFO     | mean x: 1759992044.0
[2025-10-09 10:44:47] 2025-10-09 08:43:59,201 | INFO     | mean y: 2508531.6182572613
[2025-10-09 10:44:47] 2025-10-09 08:43:59,201 | INFO     | -- intersect: 37328987237.154915
[2025-10-09 10:44:47] 2025-10-09 08:43:59,201 | INFO     | intersect: 37328987237.154915
[2025-10-09 10:44:47] 2025-10-09 08:43:59,201 | INFO     | chi2: 0.45212258483206674
[2025-10-09 10:44:47] 2025-10-09 08:43:59,201 | INFO     | current chi2=0.45212258483206674 (change=71.23925603433344 %)
[2025-10-09 10:44:47] 2025-10-09 08:43:59,202 | INFO     | sum of square deviations: 4075741535.0
[2025-10-09 10:44:47] 2025-10-09 08:43:59,203 | INFO     | sum of deviations: -81278166194.0
[2025-10-09 10:44:47] 2025-10-09 08:43:59,203 | INFO     | mean x: 1759992196.5
[2025-10-09 10:44:47] 2025-10-09 08:43:59,203 | INFO     | mean y: 2502319.9576271186
[2025-10-09 10:44:47] 2025-10-09 08:43:59,203 | INFO     | -- intersect: 35100149464.37354
[2025-10-09 10:44:47] 2025-10-09 08:43:59,203 | INFO     | intersect: 35100149464.37354
[2025-10-09 10:44:47] 2025-10-09 08:43:59,203 | INFO     | chi2: 0.4378050163794197
[2025-10-09 10:44:47] 2025-10-09 08:43:59,203 | INFO     | current chi2=0.4378050163794197 (change=3.166744801736691 %)
[2025-10-09 10:44:47] 2025-10-09 08:43:59,203 | INFO     | left removable region: 20
[2025-10-09 10:44:47] 2025-10-09 08:43:59,204 | INFO     | sum of square deviations: 3301699115.0
[2025-10-09 10:44:47] 2025-10-09 08:43:59,205 | INFO     | sum of deviations: -55510412817.49999
[2025-10-09 10:44:47] 2025-10-09 08:43:59,205 | INFO     | mean x: 1759992318.5
[2025-10-09 10:44:47] 2025-10-09 08:43:59,205 | INFO     | mean y: 2488729.7227272727
[2025-10-09 10:44:47] 2025-10-09 08:43:59,205 | INFO     | -- intersect: 29592677524.247066
[2025-10-09 10:44:47] 2025-10-09 08:43:59,205 | INFO     | intersect: 29592677524.247066
[2025-10-09 10:44:47] 2025-10-09 08:43:59,205 | INFO     | chi2: 0.37051627375371127
[2025-10-09 10:44:47] 2025-10-09 08:43:59,205 | INFO     | -- intersect: 29592677524.247066
[2025-10-09 10:44:47] 2025-10-09 08:43:59,205 | INFO     | current memory leak: -16.81 B/s (using 220 data points, chi2=0.37)
[2025-10-09 10:44:47] 2025-10-09 08:43:59,206 | INFO     | could have reported an average CPU frequency of 2138 MHz (12 samples)
[2025-10-09 10:44:47] 2025-10-09 08:43:59,206 | INFO     | ..............................
[2025-10-09 10:44:47] 2025-10-09 08:43:59,206 | INFO     | . Timing measurements:
[2025-10-09 10:44:47] 2025-10-09 08:43:59,206 | INFO     | . get job = 0 s
[2025-10-09 10:44:47] 2025-10-09 08:43:59,206 | INFO     | . initial setup = 1 s
[2025-10-09 10:44:47] 2025-10-09 08:43:59,206 | INFO     | . payload setup = 3 s
[2025-10-09 10:44:47] 2025-10-09 08:43:59,206 | INFO     | . stage-in = 0 s
[2025-10-09 10:44:47] 2025-10-09 08:43:59,206 | INFO     | . payload execution = 15007 s
[2025-10-09 10:44:47] 2025-10-09 08:43:59,206 | INFO     | . stage-out = 1 s
[2025-10-09 10:44:47] 2025-10-09 08:43:59,206 | INFO     | . log creation = 0 s
[2025-10-09 10:44:47] 2025-10-09 08:43:59,207 | INFO     | ..............................
[2025-10-09 10:44:47] 2025-10-09 08:43:59,266 | INFO     | 
[2025-10-09 10:44:47] 2025-10-09 08:43:59,267 | INFO     | job summary report
[2025-10-09 10:44:47] 2025-10-09 08:43:59,267 | INFO     | --------------------------------------------------
[2025-10-09 10:44:47] 2025-10-09 08:43:59,267 | INFO     | PanDA job id: 6836604620
[2025-10-09 10:44:47] 2025-10-09 08:43:59,267 | INFO     | task id: 46676269
[2025-10-09 10:44:47] 2025-10-09 08:43:59,267 | INFO     | errors: (none)
[2025-10-09 10:44:47] 2025-10-09 08:43:59,267 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 10:44:47] 2025-10-09 08:43:59,267 | INFO     | pilot state: finished 
[2025-10-09 10:44:47] 2025-10-09 08:43:59,267 | INFO     | transexitcode: 0
[2025-10-09 10:44:47] 2025-10-09 08:43:59,267 | INFO     | exeerrorcode: 0
[2025-10-09 10:44:47] 2025-10-09 08:43:59,267 | INFO     | exeerrordiag: 
[2025-10-09 10:44:47] 2025-10-09 08:43:59,267 | INFO     | exitcode: 0
[2025-10-09 10:44:47] 2025-10-09 08:43:59,267 | INFO     | exitmsg: OK
[2025-10-09 10:44:47] 2025-10-09 08:43:59,268 | INFO     | cpuconsumptiontime: 87792 s
[2025-10-09 10:44:47] 2025-10-09 08:43:59,268 | INFO     | nevents: 400
[2025-10-09 10:44:47] 2025-10-09 08:43:59,268 | INFO     | neventsw: 0
[2025-10-09 10:44:47] 2025-10-09 08:43:59,268 | INFO     | pid: 215301
[2025-10-09 10:44:47] 2025-10-09 08:43:59,268 | INFO     | pgrp: 215301
[2025-10-09 10:44:47] 2025-10-09 08:43:59,268 | INFO     | corecount: 6
[2025-10-09 10:44:47] 2025-10-09 08:43:59,268 | INFO     | event service: False
[2025-10-09 10:44:47] 2025-10-09 08:43:59,268 | INFO     | sizes: {0: 2348856, 1: 2348856, 3: 2349146, 11: 2349174, 15015: 2380273, 15017: 2389271, 15021: 2389455, 15027: 2389649}
[2025-10-09 10:44:47] 2025-10-09 08:43:59,268 | INFO     | --------------------------------------------------
[2025-10-09 10:44:47] 2025-10-09 08:43:59,268 | INFO     | 
[2025-10-09 10:44:47] 2025-10-09 08:43:59,268 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-09 10:44:47] 2025-10-09 08:43:59,281 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,281 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,281 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,282 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,282 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,282 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,282 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,282 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,282 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,282 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,282 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,283 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,283 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,283 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,283 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 10:44:47] 2025-10-09 08:43:59,283 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,283 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 10:44:47] 2025-10-09 08:43:59,283 | INFO     | job 6836604620 has completed (purged errors)
[2025-10-09 10:44:47] 2025-10-09 08:43:59,283 | INFO     | overall cleanup function is called
[2025-10-09 10:44:47] 2025-10-09 08:44:00,290 | INFO     | --- collectZombieJob: --- 10, [215301]
[2025-10-09 10:44:47] 2025-10-09 08:44:00,291 | INFO     | zombie collector waiting for pid 215301
[2025-10-09 10:44:47] 2025-10-09 08:44:00,291 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 10:44:47] 2025-10-09 08:44:00,291 | INFO     | collected zombie processes
[2025-10-09 10:44:47] 2025-10-09 08:44:00,291 | INFO     | will attempt to kill all subprocesses of pid=215301
[2025-10-09 10:44:47] 2025-10-09 08:44:00,375 | INFO     | process IDs to be killed: [215301] (in reverse order)
[2025-10-09 10:44:47] 2025-10-09 08:44:00,407 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 10:44:47] 2025-10-09 08:44:00,408 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 10:44:47] 2025-10-09 08:44:00,411 | INFO     | did not find any defunct processes belonging to 215301
[2025-10-09 10:44:47] 2025-10-09 08:44:00,413 | INFO     | did not find any defunct processes belonging to 215301
[2025-10-09 10:44:47] 2025-10-09 08:44:00,413 | INFO     | ready for new job
[2025-10-09 10:44:47] 2025-10-09 08:44:00,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 10:44:47] 2025-10-09 08:44:00,416 | INFO     | ***************************************
[2025-10-09 10:44:47] 2025-10-09 08:44:00,416 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 10:44:47] 2025-10-09 08:44:00,416 | INFO     | ***************************************
[2025-10-09 10:44:47] 2025-10-09 08:44:00,416 | INFO     | 
[2025-10-09 10:44:47] 2025-10-09 08:44:00,417 | INFO     | architecture information:
[2025-10-09 10:44:47] 2025-10-09 08:44:00,417 | INFO     | executing command: cat /etc/os-release
[2025-10-09 10:44:47] 2025-10-09 08:44:00,426 | INFO     | cat /etc/os-release:
[2025-10-09 10:44:47] NAME="CentOS Linux"
[2025-10-09 10:44:47] VERSION="7 (Core)"
[2025-10-09 10:44:47] ID="centos"
[2025-10-09 10:44:47] ID_LIKE="rhel fedora"
[2025-10-09 10:44:47] VERSION_ID="7"
[2025-10-09 10:44:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 10:44:47] ANSI_COLOR="0;31"
[2025-10-09 10:44:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 10:44:47] HOME_URL="https://www.centos.org/"
[2025-10-09 10:44:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 10:44:47] 
[2025-10-09 10:44:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 10:44:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 10:44:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 10:44:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 10:44:47] 
[2025-10-09 10:44:47] 2025-10-09 08:44:00,426 | INFO     | ***************************************
[2025-10-09 10:44:47] 2025-10-09 08:44:00,929 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-09 10:44:47] 2025-10-09 08:44:00,942 | INFO     | sufficient remaining disk space (979350061056 B)
[2025-10-09 10:44:47] 2025-10-09 08:44:00,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 10:44:47] 2025-10-09 08:44:00,942 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 10:44:47] 2025-10-09 08:44:00,943 | INFO     | update_server=False
[2025-10-09 10:44:47] 2025-10-09 08:44:00,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 10:44:47] 2025-10-09 08:44:00,943 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 10:44:47] 2025-10-09 08:44:00,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 10:44:47] 2025-10-09 08:44:00,943 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 10:44:47] 2025-10-09 08:44:00,943 | INFO     | aborting loop
[2025-10-09 10:44:47] 2025-10-09 08:44:01,152 | INFO     | all job control threads have been joined
[2025-10-09 10:44:47] 2025-10-09 08:44:01,258 | INFO     | all data control threads have been joined
[2025-10-09 10:44:47] 2025-10-09 08:44:01,948 | INFO     | [job] retrieve thread has finished
[2025-10-09 10:44:47] 2025-10-09 08:44:01,949 | INFO     | [job] queue monitor thread has finished
[2025-10-09 10:44:47] 2025-10-09 08:44:01,949 | INFO     | [job] job monitor thread has finished
[2025-10-09 10:44:47] 2025-10-09 08:44:02,156 | INFO     | [job] control thread has finished
[2025-10-09 10:44:47] 2025-10-09 08:44:02,253 | INFO     | all payload control threads have been joined
[2025-10-09 10:44:47] 2025-10-09 08:44:02,260 | INFO     | [data] control thread has finished
[2025-10-09 10:44:47] 2025-10-09 08:44:02,325 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 10:44:47] 2025-10-09 08:44:02,670 | INFO     | [payload] validate_post thread has finished
[2025-10-09 10:44:47] 2025-10-09 08:44:02,949 | INFO     | [data] copytool_out thread has finished
[2025-10-09 10:44:47] 2025-10-09 08:44:02,991 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 10:44:47] 2025-10-09 08:44:03,012 | INFO     | [job] validate thread has finished
[2025-10-09 10:44:47] 2025-10-09 08:44:03,037 | INFO     | [data] copytool_in thread has finished
[2025-10-09 10:44:47] 2025-10-09 08:44:03,224 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 10:44:47] 2025-10-09 08:44:03,232 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 10:44:47] 2025-10-09 08:44:03,259 | INFO     | [payload] control thread has finished
[2025-10-09 10:44:47] 2025-10-09 08:44:03,329 | INFO     | [payload] failed_post thread has finished
[2025-10-09 10:44:47] 2025-10-09 08:44:03,376 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 10:44:47] 2025-10-09 08:44:07,382 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 10:44:47] 2025-10-09 08:44:31,673 | INFO     | PID=208820 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 10:44:47] 2025-10-09 08:44:31,673 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 10:44:47] 2025-10-09 08:44:31,674 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 10:44:47] 2025-10-09 08:44:31,674 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 10:44:47] 2025-10-09 08:44:42,213 | INFO     | [monitor] cgroup control has ended
[2025-10-09 10:44:47] 2025-10-09 08:44:42,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140508870195008)>', '<ExcThread(monitor, started 140508210902784)>']
[2025-10-09 10:44:47] 2025-10-09 08:44:42,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 10:44:47] 2025-10-09 08:44:42,726 | INFO     | [monitor] control thread has ended
[2025-10-09 10:44:47] 2025-10-09 08:44:47,659 | INFO     | all workflow threads have been joined
[2025-10-09 10:44:47] 2025-10-09 08:44:47,659 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 10:44:47] 2025-10-09 08:44:47,660 | INFO     | traces error code: 0
[2025-10-09 10:44:47] 2025-10-09 08:44:47,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 10:44:47] 2025-10-09 08:44:47,735 [wrapper] ==== pilot stdout END ====
[2025-10-09 10:44:47] 2025-10-09 08:44:47,737 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 10:44:47] 2025-10-09 08:44:47,739 [wrapper] pilotpid: 208820
[2025-10-09 10:44:47] 2025-10-09 08:44:47,741 [wrapper] Pilot exit status: 0
[2025-10-09 10:44:47] 2025-10-09 08:44:47,747 [wrapper] pandaids: 6836604620
[2025-10-09 10:44:47] 2025-10-09 08:44:47,768 [wrapper] cleanup supervisor_pilot  239354 208821
[2025-10-09 10:44:47] 2025-10-09 08:44:47,770 [wrapper] Test setup, not cleaning
[2025-10-09 10:44:47] 2025-10-09 08:44:47,772 [wrapper] apfmon messages muted
[2025-10-09 10:44:47] 2025-10-09 08:44:47,774 [wrapper] ==== wrapper stdout END ====
[2025-10-09 10:44:47] 2025-10-09 08:44:47,776 [wrapper] ==== wrapper stderr END ====
[2025-10-09 10:44:47]  *** Error codes and diagnostics ***
[2025-10-09 10:44:47]     "exeErrorCode": 0,
[2025-10-09 10:44:47]     "exeErrorDiag": "",
[2025-10-09 10:44:47]     "pilotErrorCode": 0,
[2025-10-09 10:44:47]     "pilotErrorDiag": "",
[2025-10-09 10:44:47]  *** Listing of results directory ***
[2025-10-09 10:44:47] total 413804
[2025-10-09 10:44:47] -rw-r--r--. 1 boinc boinc    557409  9 oct.  00:57 pilot3.tar.gz
[2025-10-09 10:44:47] -rwx------. 1 boinc boinc     36292  9 oct.  01:15 runpilot2-wrapper.sh
[2025-10-09 10:44:47] -rw-r--r--. 1 boinc boinc      5112  9 oct.  01:15 queuedata.json
[2025-10-09 10:44:47] -rw-r--r--. 1 boinc boinc       100  9 oct.  06:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 10:44:47] -rwxr-xr-x. 1 boinc boinc      7986  9 oct.  06:33 run_atlas
[2025-10-09 10:44:47] -rw-r--r--. 1 boinc boinc       105  9 oct.  06:33 job.xml
[2025-10-09 10:44:47] -rw-r--r--. 2 boinc boinc 221698523  9 oct.  06:33 EVNT.46676267._000420.pool.root.1
[2025-10-09 10:44:47] drwxrwx--x. 1 boinc boinc        76  9 oct.  06:33 shared
[2025-10-09 10:44:47] -rw-r--r--. 2 boinc boinc    569680  9 oct.  06:33 input.tar.gz
[2025-10-09 10:44:47] -rw-r--r--. 2 boinc boinc     15120  9 oct.  06:33 start_atlas.sh
[2025-10-09 10:44:47] -rw-r--r--. 1 boinc boinc         0  9 oct.  06:33 boinc_setup_complete
[2025-10-09 10:44:47] -rw-r--r--. 1 boinc boinc      5927  9 oct.  06:33 init_data.xml
[2025-10-09 10:44:47] -rw-r--r--. 1 boinc boinc         0  9 oct.  06:33 boinc_lockfile
[2025-10-09 10:44:47] -rw-r--r--. 1 boinc boinc      2550  9 oct.  06:33 pandaJob.out
[2025-10-09 10:44:47] -rw-------. 1 boinc boinc    979306  9 oct.  06:33 agis_schedconf.cvmfs.json
[2025-10-09 10:44:47] drwx------. 1 boinc boinc       414  9 oct.  06:33 pilot3
[2025-10-09 10:44:47] -rw-------. 1 boinc boinc 193124972  9 oct.  10:43 HITS.46676269._010357.pool.root.1
[2025-10-09 10:44:47] -rw-r--r--. 1 boinc boinc       530  9 oct.  10:43 boinc_task_state.xml
[2025-10-09 10:44:47] -rw-------. 1 boinc boinc      1019  9 oct.  10:43 memory_monitor_summary.json
[2025-10-09 10:44:47] -rw-------. 1 boinc boinc   1560401  9 oct.  10:43 agis_ddmendpoints.agis.ALL.json
[2025-10-09 10:44:47] -rw-------. 1 boinc boinc    443111  9 oct.  10:43 log.46676269._010357.job.log.tgz.1
[2025-10-09 10:44:47] -rw-------. 1 boinc boinc      7761  9 oct.  10:43 heartbeat.json
[2025-10-09 10:44:47] -rw-r--r--. 1 boinc boinc      8192  9 oct.  10:44 boinc_mmap_file
[2025-10-09 10:44:47] -rw-r--r--. 1 boinc boinc        28  9 oct.  10:44 wrapper_checkpoint.txt
[2025-10-09 10:44:47] -rw-------. 1 boinc boinc        95  9 oct.  10:44 pilot_heartbeat.json
[2025-10-09 10:44:47] -rw-------. 1 boinc boinc      4748  9 oct.  10:44 pilotlog.txt
[2025-10-09 10:44:47] -rw-------. 1 boinc boinc   2068767  9 oct.  10:44 log.46676269._010357.job.log.1
[2025-10-09 10:44:47] -rw-------. 1 boinc boinc       357  9 oct.  10:44 output.list
[2025-10-09 10:44:47] -rw-r--r--. 1 boinc boinc       620  9 oct.  10:44 runtime_log
[2025-10-09 10:44:47] -rw-------. 1 boinc boinc   2529280  9 oct.  10:44 result.tar.gz
[2025-10-09 10:44:47] -rw-r--r--. 1 boinc boinc      8634  9 oct.  10:44 runtime_log.err
[2025-10-09 10:44:47] -rw-------. 1 boinc boinc       640  9 oct.  10:44 AKvNDmRYsQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0kYNDmLWhrYn.diag
[2025-10-09 10:44:47] -rw-r--r--. 1 boinc boinc     21192  9 oct.  10:44 stderr.txt
[2025-10-09 10:44:47] HITS file was successfully produced:
[2025-10-09 10:44:47] -rw-------. 1 boinc boinc 193124972  9 oct.  10:43 shared/HITS.pool.root.1
[2025-10-09 10:44:47]  *** Contents of shared directory: ***
[2025-10-09 10:44:47] total 408152
[2025-10-09 10:44:47] -rw-r--r--. 2 boinc boinc 221698523  9 oct.  06:33 ATLAS.root_0
[2025-10-09 10:44:47] -rw-r--r--. 2 boinc boinc    569680  9 oct.  06:33 input.tar.gz
[2025-10-09 10:44:47] -rw-r--r--. 2 boinc boinc     15120  9 oct.  06:33 start_atlas.sh
[2025-10-09 10:44:47] -rw-------. 1 boinc boinc 193124972  9 oct.  10:43 HITS.pool.root.1
[2025-10-09 10:44:47] -rw-------. 1 boinc boinc   2529280  9 oct.  10:44 result.tar.gz
10:44:49 (205030): run_atlas exited; CPU time 88226.576131
10:44:49 (205030): called boinc_finish(0)

</stderr_txt>
]]>

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