Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:18:08 (2099900): wrapper (7.7.26015): starting
17:18:08 (2099900): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 17:18:08] Arguments: --nthreads 8
[2025-10-08 17:18:08] Threads: 8
[2025-10-08 17:18:08] Checking for CVMFS
[2025-10-08 17:18:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 17:18:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 17:18:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 17:18:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 17:18:08] 2.11.3.0 1994 26440 204420 151489 0 630 31705497 45568000 13676 130560 0 183513509 99.855 79671645 19465 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-08 17:18:08] CVMFS is ok
[2025-10-08 17:18:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 17:18:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 17:18:08] Further information can be found at the LHC@home message board.
[2025-10-08 17:18:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 17:18:08] Checking for apptainer binary...
[2025-10-08 17:18:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 17:18:08] Running /usr/bin/apptainer --version
[2025-10-08 17:18:09] apptainer version 1.4.1-1.el9
[2025-10-08 17:18:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 17:18:09] wns0019.triumf.lcg
[2025-10-08 17:18:09] apptainer works
[2025-10-08 17:18:09] Set ATHENA_PROC_NUMBER=8
[2025-10-08 17:18:09] Set ATHENA_CORE_NUMBER=8
[2025-10-08 17:18:09] Starting ATLAS job with PandaID=6836604447
[2025-10-08 17:18:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 17:22:33]  *** The last 200 lines of the pilot log: ***
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | ..............................
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | . Timing measurements:
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | . get job = 0 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | . initial setup = 3 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | . payload setup = 10 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | . stage-in = 0 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | . payload execution = 40 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | . stage-out = 0 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | . log creation = 0 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | ..............................
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6836604447/pilotlog.txt
[2025-10-08 17:22:34] 2025-10-09 00:21:49,263 | INFO     | monitor loop #60: job 0:6836604447 is in state 'failed'
[2025-10-08 17:22:34] 2025-10-09 00:21:49,263 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-08 17:22:34] 2025-10-09 00:21:49,301 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-08 17:22:34] - Log from pilotlog.txt -
[2025-10-08 17:22:34] 2025-10-09 00:21:49,144 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 17:22:34] 2025-10-09 00:21:49,144 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 17:22:34] 2025-10-09 00:21:49,152 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 17:22:34] 2025-10-09 00:21:49,152 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | WARNING  | wrong length of table data, x=[1759969145.0], y=[1584.0] (must be same and length>=4)
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | ..............................
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | . Timing measurements:
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | . get job = 0 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | . initial setup = 3 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | . payload setup = 10 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | . stage-in = 0 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | . payload execution = 40 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | . stage-out = 0 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | . log creation = 0 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | ..............................
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6836604447/pilotlog.txt
[2025-10-08 17:22:34] 2025-10-09 00:21:49,263 | INFO     | monitor loop #60: job 0:6836604447 is in state 'failed'
[2025-10-08 17:22:34] 2025-10-09 00:21:49,263 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-08 17:22:34] 2025-10-09 00:21:49,305 | WARNING  | 
[2025-10-08 17:22:34] [begin log extracts]
[2025-10-08 17:22:34] - Log from pilotlog.txt -
[2025-10-08 17:22:34] 2025-10-09 00:21:49,144 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 17:22:34] 2025-10-09 00:21:49,144 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 17:22:34] 2025-10-09 00:21:49,152 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 17:22:34] 2025-10-09 00:21:49,152 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | WARNING  | wrong length of table data, x=[1759969145.0], y=[1584.0] (must be same and length>=4)
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | ..............................
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | . Timing measurements:
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | . get job = 0 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | . initial setup = 3 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,153 | INFO     | . payload setup = 10 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | . stage-in = 0 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | . payload execution = 40 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | . stage-out = 0 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | . log creation = 0 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | ..............................
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-08 17:22:34] 2025-10-09 00:21:49,154 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6836604447/pilotlog.txt
[2025-10-08 17:22:34] 2025-10-09 00:21:49,263 | INFO     | monitor loop #60: job 0:6836604447 is in state 'failed'
[2025-10-08 17:22:34] 2025-10-09 00:21:49,263 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-08 17:22:34] [end log extracts]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,305 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-08 17:22:34] 2025-10-09 00:21:49,334 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-08 17:22:34] 2025-10-09 00:21:49,622 | INFO     | 
[2025-10-08 17:22:34] 2025-10-09 00:21:49,623 | INFO     | job summary report
[2025-10-08 17:22:34] 2025-10-09 00:21:49,623 | INFO     | --------------------------------------------------
[2025-10-08 17:22:34] 2025-10-09 00:21:49,623 | INFO     | PanDA job id: 6836604447
[2025-10-08 17:22:34] 2025-10-09 00:21:49,623 | INFO     | task id: 46676269
[2025-10-08 17:22:34] 2025-10-09 00:21:49,623 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-08 17:19:26,267 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-08 17:22:34] 2025-10-09 00:21:49,623 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 17:22:34] 2025-10-09 00:21:49,623 | INFO     | pilot state: failed 
[2025-10-08 17:22:34] 2025-10-09 00:21:49,623 | INFO     | transexitcode: 65
[2025-10-08 17:22:34] 2025-10-09 00:21:49,623 | INFO     | exeerrorcode: 65
[2025-10-08 17:22:34] 2025-10-09 00:21:49,624 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-08 17:22:34] 2025-10-09 00:21:49,624 | INFO     | exitcode: 65
[2025-10-08 17:22:34] 2025-10-09 00:21:49,624 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-08 17:22:34] 2025-10-09 00:21:49,624 | INFO     | cpuconsumptiontime: 18 s
[2025-10-08 17:22:34] 2025-10-09 00:21:49,624 | INFO     | nevents: 0
[2025-10-08 17:22:34] 2025-10-09 00:21:49,624 | INFO     | neventsw: 0
[2025-10-08 17:22:34] 2025-10-09 00:21:49,624 | INFO     | pid: 2110173
[2025-10-08 17:22:34] 2025-10-09 00:21:49,624 | INFO     | pgrp: 2110173
[2025-10-08 17:22:34] 2025-10-09 00:21:49,624 | INFO     | corecount: 8
[2025-10-08 17:22:34] 2025-10-09 00:21:49,624 | INFO     | event service: False
[2025-10-08 17:22:34] 2025-10-09 00:21:49,624 | INFO     | sizes: {0: 2348853, 8: 2349115, 11: 2349143, 54: 2372280, 55: 2376572, 57: 2376600, 184: 2376954}
[2025-10-08 17:22:34] 2025-10-09 00:21:49,624 | INFO     | --------------------------------------------------
[2025-10-08 17:22:34] 2025-10-09 00:21:49,624 | INFO     | 
[2025-10-08 17:22:34] 2025-10-09 00:21:49,625 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-08 17:22:34] 2025-10-09 00:21:49,694 | INFO     | PID=2103575 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 17:22:34] 2025-10-09 00:21:49,697 | INFO     | .. there are 19 such processes running
[2025-10-08 17:22:34] 2025-10-09 00:21:49,710 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,710 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,710 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,710 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,711 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,711 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,711 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,711 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,711 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,711 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 17:22:34] 2025-10-09 00:21:49,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,711 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 17:22:34] 2025-10-09 00:21:49,712 | INFO     | job 6836604447 has completed (purged errors)
[2025-10-08 17:22:34] 2025-10-09 00:21:49,712 | INFO     | overall cleanup function is called
[2025-10-08 17:22:34] 2025-10-09 00:21:50,718 | INFO     | --- collectZombieJob: --- 10, [2110173]
[2025-10-08 17:22:34] 2025-10-09 00:21:50,718 | INFO     | zombie collector waiting for pid 2110173
[2025-10-08 17:22:34] 2025-10-09 00:21:50,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 17:22:34] 2025-10-09 00:21:50,718 | INFO     | collected zombie processes
[2025-10-08 17:22:34] 2025-10-09 00:21:50,718 | INFO     | will attempt to kill all subprocesses of pid=2110173
[2025-10-08 17:22:34] 2025-10-09 00:21:50,952 | INFO     | process IDs to be killed: [2110173] (in reverse order)
[2025-10-08 17:22:34] 2025-10-09 00:21:51,209 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 17:22:34] 2025-10-09 00:21:51,209 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 17:22:34] 2025-10-09 00:21:51,215 | INFO     | did not find any defunct processes belonging to 2110173
[2025-10-08 17:22:34] 2025-10-09 00:21:51,222 | INFO     | did not find any defunct processes belonging to 2110173
[2025-10-08 17:22:34] 2025-10-09 00:21:51,222 | INFO     | ready for new job
[2025-10-08 17:22:34] 2025-10-09 00:21:51,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 17:22:34] 2025-10-09 00:21:51,224 | INFO     | ***************************************
[2025-10-08 17:22:34] 2025-10-09 00:21:51,225 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 17:22:34] 2025-10-09 00:21:51,225 | INFO     | ***************************************
[2025-10-08 17:22:34] 2025-10-09 00:21:51,225 | INFO     | 
[2025-10-08 17:22:34] 2025-10-09 00:21:51,226 | INFO     | architecture information:
[2025-10-08 17:22:34] 2025-10-09 00:21:51,227 | INFO     | executing command: cat /etc/os-release
[2025-10-08 17:22:34] 2025-10-09 00:21:51,247 | INFO     | cat /etc/os-release:
[2025-10-08 17:22:34] NAME="CentOS Linux"
[2025-10-08 17:22:34] VERSION="7 (Core)"
[2025-10-08 17:22:34] ID="centos"
[2025-10-08 17:22:34] ID_LIKE="rhel fedora"
[2025-10-08 17:22:34] VERSION_ID="7"
[2025-10-08 17:22:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 17:22:34] ANSI_COLOR="0;31"
[2025-10-08 17:22:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 17:22:34] HOME_URL="https://www.centos.org/"
[2025-10-08 17:22:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 17:22:34] 
[2025-10-08 17:22:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 17:22:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 17:22:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 17:22:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 17:22:34] 
[2025-10-08 17:22:34] 2025-10-09 00:21:51,247 | INFO     | ***************************************
[2025-10-08 17:22:34] 2025-10-09 00:21:51,752 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-08 17:22:34] 2025-10-09 00:21:51,878 | INFO     | sufficient remaining disk space (1096219099136 B)
[2025-10-08 17:22:34] 2025-10-09 00:21:51,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 17:22:34] 2025-10-09 00:21:51,879 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 17:22:34] 2025-10-09 00:21:51,879 | INFO     | update_server=False
[2025-10-08 17:22:34] 2025-10-09 00:21:51,879 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 17:22:34] 2025-10-09 00:21:52,179 | INFO     | all data control threads have been joined
[2025-10-08 17:22:34] 2025-10-09 00:21:52,510 | INFO     | all payload control threads have been joined
[2025-10-08 17:22:34] 2025-10-09 00:21:52,604 | INFO     | all job control threads have been joined
[2025-10-08 17:22:34] 2025-10-09 00:21:52,784 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 17:22:34] 2025-10-09 00:21:52,784 | INFO     | aborting loop
[2025-10-08 17:22:34] 2025-10-09 00:21:52,885 | INFO     | [job] retrieve thread has finished
[2025-10-08 17:22:34] 2025-10-09 00:21:52,917 | INFO     | [data] copytool_in thread has finished
[2025-10-08 17:22:34] 2025-10-09 00:21:53,185 | INFO     | [data] control thread has finished
[2025-10-08 17:22:34] 2025-10-09 00:21:53,243 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 17:22:34] 2025-10-09 00:21:53,252 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 17:22:34] 2025-10-09 00:21:53,517 | INFO     | [payload] control thread has finished
[2025-10-08 17:22:34] 2025-10-09 00:21:53,610 | INFO     | [job] control thread has finished
[2025-10-08 17:22:34] 2025-10-09 00:21:53,657 | INFO     | [job] validate thread has finished
[2025-10-08 17:22:34] 2025-10-09 00:21:53,723 | INFO     | [payload] failed_post thread has finished
[2025-10-08 17:22:34] 2025-10-09 00:21:53,790 | INFO     | [job] job monitor thread has finished
[2025-10-08 17:22:34] 2025-10-09 00:21:53,951 | INFO     | [payload] validate_post thread has finished
[2025-10-08 17:22:34] 2025-10-09 00:21:53,982 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 17:22:34] 2025-10-09 00:21:54,198 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 17:22:34] 2025-10-09 00:21:54,280 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 17:22:34] 2025-10-09 00:21:54,286 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 17:22:34] 2025-10-09 00:21:54,489 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 17:22:34] 2025-10-09 00:21:55,259 | INFO     | [data] copytool_out thread has finished
[2025-10-08 17:22:34] 2025-10-09 00:21:55,495 | INFO     | [job] queue monitor thread has finished
[2025-10-08 17:22:34] 2025-10-09 00:21:58,291 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 17:22:34] 2025-10-09 00:22:21,952 | INFO     | PID=2103575 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 17:22:34] 2025-10-09 00:22:21,952 | INFO     | .. there are 19 such processes running
[2025-10-08 17:22:34] 2025-10-09 00:22:21,952 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 17:22:34] 2025-10-09 00:22:21,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 17:22:34] 2025-10-09 00:22:21,952 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 17:22:34] 2025-10-09 00:22:27,671 | INFO     | [monitor] cgroup control has ended
[2025-10-08 17:22:34] 2025-10-09 00:22:28,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140431617107776)>', '<ExcThread(monitor, started 140430825989888)>']
[2025-10-08 17:22:34] 2025-10-09 00:22:29,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 17:22:34] 2025-10-09 00:22:29,007 | INFO     | [monitor] control thread has ended
[2025-10-08 17:22:34] 2025-10-09 00:22:33,356 | INFO     | all workflow threads have been joined
[2025-10-08 17:22:34] 2025-10-09 00:22:33,356 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 17:22:34] 2025-10-09 00:22:33,356 | INFO     | traces error code: 0
[2025-10-08 17:22:34] 2025-10-09 00:22:33,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 17:22:34] 2025-10-09 00:22:33,654 [wrapper] ==== pilot stdout END ====
[2025-10-08 17:22:34] 2025-10-09 00:22:33,689 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 17:22:34] 2025-10-09 00:22:33,724 [wrapper] pilotpid: 2103575
[2025-10-08 17:22:34] 2025-10-09 00:22:33,743 [wrapper] Pilot exit status: 0
[2025-10-08 17:22:34] 2025-10-09 00:22:33,811 [wrapper] pandaids: 6836604447
[2025-10-08 17:22:34] 2025-10-09 00:22:33,894 [wrapper] cleanup supervisor_pilot 2103581 2103576
[2025-10-08 17:22:34] 2025-10-09 00:22:33,934 [wrapper] Test setup, not cleaning
[2025-10-08 17:22:34] 2025-10-09 00:22:33,938 [wrapper] apfmon messages muted
[2025-10-08 17:22:34] 2025-10-09 00:22:33,940 [wrapper] ==== wrapper stdout END ====
[2025-10-08 17:22:34] 2025-10-09 00:22:33,942 [wrapper] ==== wrapper stderr END ====
[2025-10-08 17:22:34]  *** Error codes and diagnostics ***
[2025-10-08 17:22:34]     "exeErrorCode": 65,
[2025-10-08 17:22:34]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-08 17:22:34]     "pilotErrorCode": 1305,
[2025-10-08 17:22:34]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-08 17:22:34]  *** Listing of results directory ***
[2025-10-08 17:22:34] total 220860
[2025-10-08 17:22:34] -rw-r--r--. 1 boinc boinc    557409 Oct  8 15:57 pilot3.tar.gz
[2025-10-08 17:22:34] -rwx------. 1 boinc boinc     36292 Oct  8 16:14 runpilot2-wrapper.sh
[2025-10-08 17:22:34] -rw-r--r--. 1 boinc boinc      5112 Oct  8 16:14 queuedata.json
[2025-10-08 17:22:34] -rw-r--r--. 1 boinc boinc       100 Oct  8 17:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 17:22:34] -rwxr-xr-x. 1 boinc boinc      7986 Oct  8 17:18 run_atlas
[2025-10-08 17:22:34] -rw-r--r--. 1 boinc boinc       105 Oct  8 17:18 job.xml
[2025-10-08 17:22:34] -rw-r--r--. 1 boinc boinc      6444 Oct  8 17:18 init_data.xml
[2025-10-08 17:22:34] -rw-r--r--. 2 boinc boinc 222031110 Oct  8 17:18 EVNT.46676267._000413.pool.root.1
[2025-10-08 17:22:34] -rw-r--r--. 2 boinc boinc     15120 Oct  8 17:18 start_atlas.sh
[2025-10-08 17:22:34] drwxrwx--x. 2 boinc boinc      4096 Oct  8 17:18 shared
[2025-10-08 17:22:34] -rw-r--r--. 2 boinc boinc    569680 Oct  8 17:18 input.tar.gz
[2025-10-08 17:22:34] -rw-r--r--. 1 boinc boinc         0 Oct  8 17:18 boinc_lockfile
[2025-10-08 17:22:34] -rw-r--r--. 1 boinc boinc      2550 Oct  8 17:18 pandaJob.out
[2025-10-08 17:22:34] -rw-------. 1 boinc boinc    979298 Oct  8 17:18 agis_schedconf.cvmfs.json
[2025-10-08 17:22:34] -rw-------. 1 boinc boinc   1560401 Oct  8 17:18 agis_ddmendpoints.agis.ALL.json
[2025-10-08 17:22:34] drwx------. 5 boinc boinc      4096 Oct  8 17:18 pilot3
[2025-10-08 17:22:34] -rw-r--r--. 1 boinc boinc       522 Oct  8 17:19 boinc_task_state.xml
[2025-10-08 17:22:34] -rw-------. 1 boinc boinc       950 Oct  8 17:19 memory_monitor_summary.json
[2025-10-08 17:22:34] -rw-------. 1 boinc boinc     21292 Oct  8 17:19 log.46676269._010184.job.log.tgz.1
[2025-10-08 17:22:34] -rw-------. 1 boinc boinc        95 Oct  8 17:21 pilot_heartbeat.json
[2025-10-08 17:22:34] -rw-------. 1 boinc boinc      8389 Oct  8 17:21 heartbeat.json
[2025-10-08 17:22:34] -rw-r--r--. 1 boinc boinc        22 Oct  8 17:22 wrapper_checkpoint.txt
[2025-10-08 17:22:34] -rw-r--r--. 1 boinc boinc      8192 Oct  8 17:22 boinc_mmap_file
[2025-10-08 17:22:34] -rw-------. 1 boinc boinc      4823 Oct  8 17:22 pilotlog.txt
[2025-10-08 17:22:34] -rw-------. 1 boinc boinc     87708 Oct  8 17:22 log.46676269._010184.job.log.1
[2025-10-08 17:22:34] -rw-------. 1 boinc boinc       188 Oct  8 17:22 output.list
[2025-10-08 17:22:34] -rw-r--r--. 1 boinc boinc       620 Oct  8 17:22 runtime_log
[2025-10-08 17:22:34] -rw-------. 1 boinc boinc    133120 Oct  8 17:22 result.tar.gz
[2025-10-08 17:22:34] -rw-r--r--. 1 boinc boinc      8526 Oct  8 17:22 runtime_log.err
[2025-10-08 17:22:34] -rw-------. 1 boinc boinc       647 Oct  8 17:22 GYTNDmSXsQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmW7MMDm5SEQFn.diag
[2025-10-08 17:22:34] -rw-r--r--. 1 boinc boinc     21885 Oct  8 17:22 stderr.txt
[2025-10-08 17:22:34] No HITS result produced
[2025-10-08 17:22:34]  *** Contents of shared directory: ***
[2025-10-08 17:22:34] total 217540
[2025-10-08 17:22:34] -rw-r--r--. 2 boinc boinc 222031110 Oct  8 17:18 ATLAS.root_0
[2025-10-08 17:22:34] -rw-r--r--. 2 boinc boinc     15120 Oct  8 17:18 start_atlas.sh
[2025-10-08 17:22:34] -rw-r--r--. 2 boinc boinc    569680 Oct  8 17:18 input.tar.gz
[2025-10-08 17:22:34] -rw-------. 1 boinc boinc    133120 Oct  8 17:22 result.tar.gz
17:22:35 (2099900): run_atlas exited; CPU time 25.519684
17:22:35 (2099900): called boinc_finish(0)

</stderr_txt>
]]>

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