Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
02:11:30 (188859): wrapper (7.7.26015): starting
02:11:30 (188859): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 02:11:30] Arguments: --nthreads 12
[2025-10-09 02:11:30] Threads: 12
[2025-10-09 02:11:30] Checking for CVMFS
[2025-10-09 02:11:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 02:11:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 02:11:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 02:11:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 02:11:30] 2.13.2.0 137079 65 46368 151489 2 188 2259626 4096000 0 130560 0 123013 99.984 4203 314 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-09 02:11:30] CVMFS is ok
[2025-10-09 02:11:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 02:11:30] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-09 02:11:30] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-09 02:11:30] Further information can be found at the LHC@home message board.
[2025-10-09 02:11:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 02:11:30] Checking for apptainer binary...
[2025-10-09 02:11:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 02:11:30] Running /usr/bin/apptainer --version
[2025-10-09 02:11:30] apptainer version 1.4.2
[2025-10-09 02:11:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 02:11:30] matisse
[2025-10-09 02:11:30] apptainer works
[2025-10-09 02:11:30] Set ATHENA_PROC_NUMBER=12
[2025-10-09 02:11:30] Set ATHENA_CORE_NUMBER=12
[2025-10-09 02:11:30] Starting ATLAS job with PandaID=6836603251
[2025-10-09 02:11:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 02:43:43]  *** The last 200 lines of the pilot log: ***
[2025-10-09 02:43:43]  replicas=None
[2025-10-09 02:43:43]  scope=mc23_13p6TeV
[2025-10-09 02:43:43]  status=None
[2025-10-09 02:43:43]  status_code=0
[2025-10-09 02:43:43]  storage_token=
[2025-10-09 02:43:43]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6836603251/log.46676269._009521.job.log.tgz.1
[2025-10-09 02:43:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/b5/log.46676269._009521.job.log.tgz.1
[2025-10-09 02:43:43]  workdir=None
[2025-10-09 02:43:43] ]
[2025-10-09 02:43:43] 2025-10-09 00:42:43,492 | INFO     | transferring file log.46676269._009521.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6836603251/log.46676269._009521.job.log.tgz.1 to /var/lib/boinc
[2025-10-09 02:43:43] 2025-10-09 00:42:43,492 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6836603251/log.46676269._009521.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.466762
[2025-10-09 02:43:43] 2025-10-09 00:42:43,503 | INFO     | adding to output.list: log.46676269._009521.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/b5/log.46676269._009521.job.log.tg
[2025-10-09 02:43:43] 2025-10-09 00:42:43,504 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-09 02:43:43] 2025-10-09 00:42:43,504 | INFO     | summary of transferred files:
[2025-10-09 02:43:43] 2025-10-09 00:42:43,504 | INFO     |  -- lfn=log.46676269._009521.job.log.tgz.1, status_code=0, status=transferred
[2025-10-09 02:43:43] 2025-10-09 00:42:43,504 | INFO     | stage-out finished correctly
[2025-10-09 02:43:43] 2025-10-09 00:42:44,408 | INFO     | monitor loop #146: job 0:6836603251 is in state 'finished'
[2025-10-09 02:43:43] 2025-10-09 00:42:44,408 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 02:43:43] 2025-10-09 00:42:44,818 | INFO     | time since job start (1869s) is within the limit (172800.0s)
[2025-10-09 02:43:43] 2025-10-09 00:42:46,133 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 02:43:43] 2025-10-09 00:42:46,823 | INFO     | time since job start (1871s) is within the limit (172800.0s)
[2025-10-09 02:43:43] 2025-10-09 00:42:46,909 | INFO     | monitor loop #147: job 0:6836603251 is in state 'finished'
[2025-10-09 02:43:43] 2025-10-09 00:42:46,909 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 02:43:43] 2025-10-09 00:42:48,045 | INFO     | job 6836603251 has state=finished
[2025-10-09 02:43:43] 2025-10-09 00:42:48,045 | INFO     | preparing for final server update for job 6836603251 in state='finished'
[2025-10-09 02:43:43] 2025-10-09 00:42:48,045 | INFO     | this job has now completed (state=finished)
[2025-10-09 02:43:43] 2025-10-09 00:42:48,045 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 02:43:43] 2025-10-09 00:42:48,045 | INFO     | log transfer has been attempted: DONE
[2025-10-09 02:43:43] 2025-10-09 00:42:48,045 | INFO     | job 6836603251 has finished - writing final server update
[2025-10-09 02:43:43] 2025-10-09 00:42:48,045 | INFO     | total number of processed events: 400 (read)
[2025-10-09 02:43:43] 2025-10-09 00:42:48,046 | INFO     | executing command: lscpu
[2025-10-09 02:43:43] 2025-10-09 00:42:48,060 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 02:43:43] 2025-10-09 00:42:48,829 | INFO     | time since job start (1873s) is within the limit (172800.0s)
[2025-10-09 02:43:43] 2025-10-09 00:42:49,411 | INFO     | monitor loop #148: job 0:6836603251 is in state 'finished'
[2025-10-09 02:43:43] 2025-10-09 00:42:49,411 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 02:43:43] 2025-10-09 00:42:49,773 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-09 02:43:43] 2025-10-09 00:42:49,774 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3465.9390000000003
[2025-10-09 02:43:43] 2025-10-09 00:42:49,775 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6836603251/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 02:43:43] 2025-10-09 00:42:49,776 | INFO     | extracted standard info from prmon json
[2025-10-09 02:43:43] 2025-10-09 00:42:49,776 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 02:43:43] 2025-10-09 00:42:49,776 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 02:43:43] 2025-10-09 00:42:49,776 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 02:43:43] 2025-10-09 00:42:49,776 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 02:43:43] 2025-10-09 00:42:49,776 | INFO     | fitting pss+swap vs Time
[2025-10-09 02:43:43] 2025-10-09 00:42:49,776 | INFO     | sum of square deviations: 4279150.0
[2025-10-09 02:43:43] 2025-10-09 00:42:49,776 | INFO     | sum of deviations: 144966500.0
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | mean x: 1759969718.5
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | mean y: 2715687.3333333335
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | -- intersect: -59620492238.75719
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | intersect: -59620492238.75719
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | chi2: 7.268463046389994e-05
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | -- intersect: -59620492238.75719
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | current memory leak: 33.88 B/s (using 24 data points, chi2=0.00)
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | could have reported an average CPU frequency of 3670 MHz (5 samples)
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | ..............................
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | . Timing measurements:
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | . get job = 0 s
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | . initial setup = 1 s
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | . payload setup = 2 s
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | . stage-in = 0 s
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | . payload execution = 1848 s
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | . stage-out = 0 s
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | . log creation = 0 s
[2025-10-09 02:43:43] 2025-10-09 00:42:49,777 | INFO     | ..............................
[2025-10-09 02:43:43] 2025-10-09 00:42:49,810 | INFO     | 
[2025-10-09 02:43:43] 2025-10-09 00:42:49,810 | INFO     | job summary report
[2025-10-09 02:43:43] 2025-10-09 00:42:49,810 | INFO     | --------------------------------------------------
[2025-10-09 02:43:43] 2025-10-09 00:42:49,810 | INFO     | PanDA job id: 6836603251
[2025-10-09 02:43:43] 2025-10-09 00:42:49,810 | INFO     | task id: 46676269
[2025-10-09 02:43:43] 2025-10-09 00:42:49,810 | INFO     | errors: (none)
[2025-10-09 02:43:43] 2025-10-09 00:42:49,810 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 02:43:43] 2025-10-09 00:42:49,810 | INFO     | pilot state: finished 
[2025-10-09 02:43:43] 2025-10-09 00:42:49,810 | INFO     | transexitcode: 0
[2025-10-09 02:43:43] 2025-10-09 00:42:49,810 | INFO     | exeerrorcode: 0
[2025-10-09 02:43:43] 2025-10-09 00:42:49,810 | INFO     | exeerrordiag: 
[2025-10-09 02:43:43] 2025-10-09 00:42:49,810 | INFO     | exitcode: 0
[2025-10-09 02:43:43] 2025-10-09 00:42:49,810 | INFO     | exitmsg: OK
[2025-10-09 02:43:43] 2025-10-09 00:42:49,811 | INFO     | cpuconsumptiontime: 20155 s
[2025-10-09 02:43:43] 2025-10-09 00:42:49,811 | INFO     | nevents: 400
[2025-10-09 02:43:43] 2025-10-09 00:42:49,811 | INFO     | neventsw: 0
[2025-10-09 02:43:43] 2025-10-09 00:42:49,811 | INFO     | pid: 199198
[2025-10-09 02:43:43] 2025-10-09 00:42:49,811 | INFO     | pgrp: 199198
[2025-10-09 02:43:43] 2025-10-09 00:42:49,811 | INFO     | corecount: 12
[2025-10-09 02:43:43] 2025-10-09 00:42:49,811 | INFO     | event service: False
[2025-10-09 02:43:43] 2025-10-09 00:42:49,811 | INFO     | sizes: {0: 2348857, 2: 2349119, 11: 2349147, 1854: 2374075, 1855: 2383087, 1858: 2383143, 1861: 2383497}
[2025-10-09 02:43:43] 2025-10-09 00:42:49,811 | INFO     | --------------------------------------------------
[2025-10-09 02:43:43] 2025-10-09 00:42:49,811 | INFO     | 
[2025-10-09 02:43:43] 2025-10-09 00:42:49,811 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-09 02:43:43] 2025-10-09 00:42:49,822 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,822 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,822 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,822 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,822 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,823 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,823 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,823 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 02:43:43] 2025-10-09 00:42:49,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,823 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 02:43:43] 2025-10-09 00:42:49,823 | INFO     | job 6836603251 has completed (purged errors)
[2025-10-09 02:43:43] 2025-10-09 00:42:49,823 | INFO     | overall cleanup function is called
[2025-10-09 02:43:43] 2025-10-09 00:42:50,829 | INFO     | --- collectZombieJob: --- 10, [199198]
[2025-10-09 02:43:43] 2025-10-09 00:42:50,830 | INFO     | zombie collector waiting for pid 199198
[2025-10-09 02:43:43] 2025-10-09 00:42:50,830 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 02:43:43] 2025-10-09 00:42:50,830 | INFO     | collected zombie processes
[2025-10-09 02:43:43] 2025-10-09 00:42:50,830 | INFO     | will attempt to kill all subprocesses of pid=199198
[2025-10-09 02:43:43] 2025-10-09 00:42:50,893 | INFO     | process IDs to be killed: [199198] (in reverse order)
[2025-10-09 02:43:43] 2025-10-09 00:42:50,920 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 02:43:43] 2025-10-09 00:42:50,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 02:43:43] 2025-10-09 00:42:50,922 | INFO     | did not find any defunct processes belonging to 199198
[2025-10-09 02:43:43] 2025-10-09 00:42:50,924 | INFO     | did not find any defunct processes belonging to 199198
[2025-10-09 02:43:43] 2025-10-09 00:42:50,924 | INFO     | ready for new job
[2025-10-09 02:43:43] 2025-10-09 00:42:50,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 02:43:43] 2025-10-09 00:42:50,924 | INFO     | ***************************************
[2025-10-09 02:43:43] 2025-10-09 00:42:50,924 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 02:43:43] 2025-10-09 00:42:50,924 | INFO     | ***************************************
[2025-10-09 02:43:43] 2025-10-09 00:42:50,924 | INFO     | 
[2025-10-09 02:43:43] 2025-10-09 00:42:50,925 | INFO     | architecture information:
[2025-10-09 02:43:43] 2025-10-09 00:42:50,925 | INFO     | executing command: cat /etc/os-release
[2025-10-09 02:43:43] 2025-10-09 00:42:50,933 | INFO     | cat /etc/os-release:
[2025-10-09 02:43:43] NAME="CentOS Linux"
[2025-10-09 02:43:43] VERSION="7 (Core)"
[2025-10-09 02:43:43] ID="centos"
[2025-10-09 02:43:43] ID_LIKE="rhel fedora"
[2025-10-09 02:43:43] VERSION_ID="7"
[2025-10-09 02:43:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 02:43:43] ANSI_COLOR="0;31"
[2025-10-09 02:43:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 02:43:43] HOME_URL="https://www.centos.org/"
[2025-10-09 02:43:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 02:43:43] 
[2025-10-09 02:43:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 02:43:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 02:43:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 02:43:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 02:43:43] 
[2025-10-09 02:43:43] 2025-10-09 00:42:50,933 | INFO     | ***************************************
[2025-10-09 02:43:43] 2025-10-09 00:42:51,435 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-09 02:43:43] 2025-10-09 00:42:51,443 | INFO     | sufficient remaining disk space (533886664704 B)
[2025-10-09 02:43:43] 2025-10-09 00:42:51,443 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 02:43:43] 2025-10-09 00:42:51,443 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 02:43:43] 2025-10-09 00:42:51,443 | INFO     | update_server=False
[2025-10-09 02:43:43] 2025-10-09 00:42:51,443 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 02:43:43] 2025-10-09 00:42:51,444 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 02:43:43] 2025-10-09 00:42:51,544 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 02:43:43] 2025-10-09 00:42:51,768 | INFO     | all job control threads have been joined
[2025-10-09 02:43:43] 2025-10-09 00:42:51,867 | INFO     | all data control threads have been joined
[2025-10-09 02:43:43] 2025-10-09 00:42:51,914 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 02:43:43] 2025-10-09 00:42:51,914 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 02:43:43] 2025-10-09 00:42:51,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 02:43:43] 2025-10-09 00:42:51,914 | INFO     | will abort loop
[2025-10-09 02:43:43] 2025-10-09 00:42:51,945 | INFO     | all payload control threads have been joined
[2025-10-09 02:43:43] 2025-10-09 00:42:52,169 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 02:43:43] 2025-10-09 00:42:52,448 | INFO     | [job] retrieve thread has finished
[2025-10-09 02:43:43] 2025-10-09 00:42:52,449 | INFO     | [job] queue monitor thread has finished
[2025-10-09 02:43:43] 2025-10-09 00:42:52,769 | INFO     | [job] control thread has finished
[2025-10-09 02:43:43] 2025-10-09 00:42:52,786 | INFO     | [payload] validate_post thread has finished
[2025-10-09 02:43:43] 2025-10-09 00:42:52,872 | INFO     | [data] control thread has finished
[2025-10-09 02:43:43] 2025-10-09 00:42:52,878 | INFO     | [job] validate thread has finished
[2025-10-09 02:43:43] 2025-10-09 00:42:52,919 | INFO     | [job] job monitor thread has finished
[2025-10-09 02:43:43] 2025-10-09 00:42:52,940 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 02:43:43] 2025-10-09 00:42:52,946 | INFO     | [payload] control thread has finished
[2025-10-09 02:43:43] 2025-10-09 00:42:53,008 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 02:43:43] 2025-10-09 00:42:53,068 | INFO     | [payload] failed_post thread has finished
[2025-10-09 02:43:43] 2025-10-09 00:42:53,263 | INFO     | [data] copytool_in thread has finished
[2025-10-09 02:43:43] 2025-10-09 00:42:53,550 | INFO     | [data] copytool_out thread has finished
[2025-10-09 02:43:43] 2025-10-09 00:42:53,656 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 02:43:43] 2025-10-09 00:42:53,934 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 02:43:43] 2025-10-09 00:42:56,174 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 02:43:43] 2025-10-09 00:43:21,971 | INFO     | PID=192643 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 02:43:43] 2025-10-09 00:43:21,971 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 02:43:43] 2025-10-09 00:43:21,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 02:43:43] 2025-10-09 00:43:21,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 02:43:43] 2025-10-09 00:43:38,069 | INFO     | [monitor] cgroup control has ended
[2025-10-09 02:43:43] 2025-10-09 00:43:38,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124600929310528)>', '<ExcThread(monitor, started 124600574777088)>']
[2025-10-09 02:43:43] 2025-10-09 00:43:39,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 02:43:43] 2025-10-09 00:43:39,049 | INFO     | [monitor] control thread has ended
[2025-10-09 02:43:43] 2025-10-09 00:43:43,194 | INFO     | all workflow threads have been joined
[2025-10-09 02:43:43] 2025-10-09 00:43:43,194 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 02:43:43] 2025-10-09 00:43:43,194 | INFO     | traces error code: 0
[2025-10-09 02:43:43] 2025-10-09 00:43:43,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 02:43:43] 2025-10-09 00:43:43,246 [wrapper] ==== pilot stdout END ====
[2025-10-09 02:43:43] 2025-10-09 00:43:43,248 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 02:43:43] 2025-10-09 00:43:43,249 [wrapper] pilotpid: 192643
[2025-10-09 02:43:43] 2025-10-09 00:43:43,250 [wrapper] Pilot exit status: 0
[2025-10-09 02:43:43] 2025-10-09 00:43:43,255 [wrapper] pandaids: 6836603251
[2025-10-09 02:43:43] 2025-10-09 00:43:43,273 [wrapper] cleanup supervisor_pilot  207978 192644
[2025-10-09 02:43:43] 2025-10-09 00:43:43,274 [wrapper] Test setup, not cleaning
[2025-10-09 02:43:43] 2025-10-09 00:43:43,275 [wrapper] apfmon messages muted
[2025-10-09 02:43:43] 2025-10-09 00:43:43,277 [wrapper] ==== wrapper stdout END ====
[2025-10-09 02:43:43] 2025-10-09 00:43:43,279 [wrapper] ==== wrapper stderr END ====
[2025-10-09 02:43:43]  *** Error codes and diagnostics ***
[2025-10-09 02:43:43]     "exeErrorCode": 0,
[2025-10-09 02:43:43]     "exeErrorDiag": "",
[2025-10-09 02:43:43]     "pilotErrorCode": 0,
[2025-10-09 02:43:43]     "pilotErrorDiag": "",
[2025-10-09 02:43:43]  *** Listing of results directory ***
[2025-10-09 02:43:43] total 409196
[2025-10-09 02:43:43] -rw-r--r-- 1 boinc boinc    557409 Okt  9 00:57 pilot3.tar.gz
[2025-10-09 02:43:43] -rwx------ 1 boinc boinc     36292 Okt  9 01:03 runpilot2-wrapper.sh
[2025-10-09 02:43:43] -rw-r--r-- 1 boinc boinc      5112 Okt  9 01:05 queuedata.json
[2025-10-09 02:43:43] -rw-r--r-- 1 boinc boinc       100 Okt  9 02:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 02:43:43] -rwxr-xr-x 1 boinc boinc      7986 Okt  9 02:11 run_atlas
[2025-10-09 02:43:43] -rw-r--r-- 1 boinc boinc       105 Okt  9 02:11 job.xml
[2025-10-09 02:43:43] -rw-r--r-- 2 boinc boinc 219203563 Okt  9 02:11 EVNT.46676267._000385.pool.root.1
[2025-10-09 02:43:43] -rw-r--r-- 2 boinc boinc    569678 Okt  9 02:11 input.tar.gz
[2025-10-09 02:43:43] -rw-r--r-- 2 boinc boinc     15120 Okt  9 02:11 start_atlas.sh
[2025-10-09 02:43:43] drwxrwx--x 2 boinc boinc      4096 Okt  9 02:11 shared
[2025-10-09 02:43:43] -rw-r--r-- 1 boinc boinc         0 Okt  9 02:11 boinc_setup_complete
[2025-10-09 02:43:43] -rw-r--r-- 1 boinc boinc      9677 Okt  9 02:11 init_data.xml
[2025-10-09 02:43:43] -rw-r--r-- 1 boinc boinc         0 Okt  9 02:11 boinc_lockfile
[2025-10-09 02:43:43] -rw-r--r-- 1 boinc boinc      2547 Okt  9 02:11 pandaJob.out
[2025-10-09 02:43:43] -rw------- 1 boinc boinc    979298 Okt  9 02:11 agis_schedconf.cvmfs.json
[2025-10-09 02:43:43] -rw------- 1 boinc boinc   1560401 Okt  9 02:11 agis_ddmendpoints.agis.ALL.json
[2025-10-09 02:43:43] drwx------ 5 boinc boinc      4096 Okt  9 02:11 pilot3
[2025-10-09 02:43:43] -rw------- 1 boinc boinc 194609642 Okt  9 02:42 HITS.46676269._009521.pool.root.1
[2025-10-09 02:43:43] -rw------- 1 boinc boinc      1015 Okt  9 02:42 memory_monitor_summary.json
[2025-10-09 02:43:43] -rw-r--r-- 1 boinc boinc       529 Okt  9 02:42 boinc_task_state.xml
[2025-10-09 02:43:43] -rw------- 1 boinc boinc    332982 Okt  9 02:42 log.46676269._009521.job.log.tgz.1
[2025-10-09 02:43:43] -rw------- 1 boinc boinc      7720 Okt  9 02:42 heartbeat.json
[2025-10-09 02:43:43] -rw------- 1 boinc boinc        95 Okt  9 02:42 pilot_heartbeat.json
[2025-10-09 02:43:43] -rw-r--r-- 1 boinc boinc      8192 Okt  9 02:43 boinc_mmap_file
[2025-10-09 02:43:43] -rw-r--r-- 1 boinc boinc        27 Okt  9 02:43 wrapper_checkpoint.txt
[2025-10-09 02:43:43] -rw------- 1 boinc boinc      4941 Okt  9 02:43 pilotlog.txt
[2025-10-09 02:43:43] -rw------- 1 boinc boinc    309672 Okt  9 02:43 log.46676269._009521.job.log.1
[2025-10-09 02:43:43] -rw------- 1 boinc boinc       357 Okt  9 02:43 output.list
[2025-10-09 02:43:43] -rw-r--r-- 1 boinc boinc       620 Okt  9 02:43 runtime_log
[2025-10-09 02:43:43] -rw------- 1 boinc boinc    665600 Okt  9 02:43 result.tar.gz
[2025-10-09 02:43:43] -rw------- 1 boinc boinc       645 Okt  9 02:43 vknNDmWNsQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmobYNDmNV45kn.diag
[2025-10-09 02:43:43] -rw-r--r-- 1 boinc boinc      8766 Okt  9 02:43 runtime_log.err
[2025-10-09 02:43:43] -rw-r--r-- 1 boinc boinc     21921 Okt  9 02:43 stderr.txt
[2025-10-09 02:43:43] HITS file was successfully produced:
[2025-10-09 02:43:43] -rw------- 1 boinc boinc 194609642 Okt  9 02:42 shared/HITS.pool.root.1
[2025-10-09 02:43:43]  *** Contents of shared directory: ***
[2025-10-09 02:43:43] total 405356
[2025-10-09 02:43:43] -rw-r--r-- 2 boinc boinc 219203563 Okt  9 02:11 ATLAS.root_0
[2025-10-09 02:43:43] -rw-r--r-- 2 boinc boinc    569678 Okt  9 02:11 input.tar.gz
[2025-10-09 02:43:43] -rw-r--r-- 2 boinc boinc     15120 Okt  9 02:11 start_atlas.sh
[2025-10-09 02:43:43] -rw------- 1 boinc boinc 194609642 Okt  9 02:42 HITS.pool.root.1
[2025-10-09 02:43:43] -rw------- 1 boinc boinc    665600 Okt  9 02:43 result.tar.gz
02:43:44 (188859): run_atlas exited; CPU time 20154.933486
02:43:44 (188859): called boinc_finish(0)

</stderr_txt>
]]>

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