Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:02:37 (1857947): wrapper (7.7.26015): starting
19:02:37 (1857947): wrapper: running run_atlas (--nthreads 9)
[2025-10-08 19:02:37] Arguments: --nthreads 9
[2025-10-08 19:02:37] Threads: 9
[2025-10-08 19:02:37] Checking for CVMFS
[2025-10-08 19:02:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 19:02:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 19:02:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 19:02:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 19:02:37] 2.13.2.0 1556042 48021 401988 151488 3 36 24031408 29414401 12480 16776704 0 121966642 99.510 157621747 29045 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-08 19:02:37] CVMFS is ok
[2025-10-08 19:02:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 19:02:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 19:02:37] Further information can be found at the LHC@home message board.
[2025-10-08 19:02:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 19:02:37] Checking for apptainer binary...
[2025-10-08 19:02:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 19:02:37] Running /usr/bin/apptainer --version
[2025-10-08 19:02:37] apptainer version 1.4.3-1.el9
[2025-10-08 19:02:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 19:02:37] c6-5-37-4.aglt2.org
[2025-10-08 19:02:37] apptainer works
[2025-10-08 19:02:38] Set ATHENA_PROC_NUMBER=9
[2025-10-08 19:02:38] Set ATHENA_CORE_NUMBER=9
[2025-10-08 19:02:38] Starting ATLAS job with PandaID=6836597994
[2025-10-08 19:02:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 21:48:10]  *** The last 200 lines of the pilot log: ***
[2025-10-08 21:48:10] 2025-10-09 01:47:10,649 | INFO     | time since job start (9862s) is within the limit (172800.0s)
[2025-10-08 21:48:10] 2025-10-09 01:47:10,705 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-08 21:48:10] 2025-10-09 01:47:10,710 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3118.4462321428573
[2025-10-08 21:48:10] 2025-10-09 01:47:10,715 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6836597994/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 21:48:10] 2025-10-09 01:47:10,716 | INFO     | extracted standard info from prmon json
[2025-10-08 21:48:10] 2025-10-09 01:47:10,716 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 21:48:10] 2025-10-09 01:47:10,716 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 21:48:10] 2025-10-09 01:47:10,716 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 21:48:10] 2025-10-09 01:47:10,716 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 21:48:10] 2025-10-09 01:47:10,718 | INFO     | fitting pss+swap vs Time
[2025-10-08 21:48:10] 2025-10-09 01:47:10,718 | INFO     | sum of square deviations: 1293976300.4099364
[2025-10-08 21:48:10] 2025-10-09 01:47:10,719 | INFO     | sum of deviations: 32639761345.27949
[2025-10-08 21:48:10] 2025-10-09 01:47:10,719 | INFO     | mean x: 1759969476.0993788
[2025-10-08 21:48:10] 2025-10-09 01:47:10,719 | INFO     | mean y: 2135114.795031056
[2025-10-08 21:48:10] 2025-10-09 01:47:10,719 | INFO     | -- intersect: -44392019288.6987
[2025-10-08 21:48:10] 2025-10-09 01:47:10,719 | INFO     | intersect: -44392019288.6987
[2025-10-08 21:48:10] 2025-10-09 01:47:10,719 | INFO     | chi2: 1.6368101015470176
[2025-10-08 21:48:10] 2025-10-09 01:47:10,719 | INFO     | sum of square deviations: 1177123175.3589737
[2025-10-08 21:48:10] 2025-10-09 01:47:10,720 | INFO     | sum of deviations: 31194936987.307697
[2025-10-08 21:48:10] 2025-10-09 01:47:10,720 | INFO     | mean x: 1759969323.602564
[2025-10-08 21:48:10] 2025-10-09 01:47:10,720 | INFO     | mean y: 2133232.230769231
[2025-10-08 21:48:10] 2025-10-09 01:47:10,720 | INFO     | -- intersect: -46638807409.03531
[2025-10-08 21:48:10] 2025-10-09 01:47:10,720 | INFO     | intersect: -46638807409.03531
[2025-10-08 21:48:10] 2025-10-09 01:47:10,720 | INFO     | chi2: 1.635494135375064
[2025-10-08 21:48:10] 2025-10-09 01:47:10,720 | INFO     | current chi2=1.635494135375064 (change=0.08039821911593374 %)
[2025-10-08 21:48:10] 2025-10-09 01:47:10,720 | INFO     | right removable region: 155
[2025-10-08 21:48:10] 2025-10-09 01:47:10,720 | INFO     | sum of square deviations: 1177113415.3589737
[2025-10-08 21:48:10] 2025-10-09 01:47:10,721 | INFO     | sum of deviations: 7620188489.987182
[2025-10-08 21:48:10] 2025-10-09 01:47:10,721 | INFO     | mean x: 1759969628.602564
[2025-10-08 21:48:10] 2025-10-09 01:47:10,721 | INFO     | mean y: 2167454.532051282
[2025-10-08 21:48:10] 2025-10-09 01:47:10,721 | INFO     | -- intersect: -11391212428.50526
[2025-10-08 21:48:10] 2025-10-09 01:47:10,721 | INFO     | intersect: -11391212428.50526
[2025-10-08 21:48:10] 2025-10-09 01:47:10,721 | INFO     | chi2: 0.07110531760345877
[2025-10-08 21:48:10] 2025-10-09 01:47:10,721 | INFO     | current chi2=0.07110531760345877 (change=95.65586028970287 %)
[2025-10-08 21:48:10] 2025-10-09 01:47:10,721 | INFO     | sum of square deviations: 1067516239.5099369
[2025-10-08 21:48:10] 2025-10-09 01:47:10,722 | INFO     | sum of deviations: 5976342433.377488
[2025-10-08 21:48:10] 2025-10-09 01:47:10,722 | INFO     | mean x: 1759969781.0993378
[2025-10-08 21:48:10] 2025-10-09 01:47:10,722 | INFO     | mean y: 2169710.7748344373
[2025-10-08 21:48:10] 2025-10-09 01:47:10,722 | INFO     | -- intersect: -9850778370.909271
[2025-10-08 21:48:10] 2025-10-09 01:47:10,722 | INFO     | intersect: -9850778370.909271
[2025-10-08 21:48:10] 2025-10-09 01:47:10,722 | INFO     | chi2: 0.06549353520438057
[2025-10-08 21:48:10] 2025-10-09 01:47:10,722 | INFO     | current chi2=0.06549353520438057 (change=7.892211986695666 %)
[2025-10-08 21:48:10] 2025-10-09 01:47:10,722 | INFO     | left removable region: 20
[2025-10-08 21:48:10] 2025-10-09 01:47:10,722 | INFO     | sum of square deviations: 762863082.9333341
[2025-10-08 21:48:10] 2025-10-09 01:47:10,722 | INFO     | sum of deviations: 2850441801.8666673
[2025-10-08 21:48:10] 2025-10-09 01:47:10,722 | INFO     | mean x: 1759969903.088889
[2025-10-08 21:48:10] 2025-10-09 01:47:10,722 | INFO     | mean y: 2173235.511111111
[2025-10-08 21:48:10] 2025-10-09 01:47:10,723 | INFO     | -- intersect: -6573963287.574776
[2025-10-08 21:48:10] 2025-10-09 01:47:10,723 | INFO     | intersect: -6573963287.574776
[2025-10-08 21:48:10] 2025-10-09 01:47:10,723 | INFO     | chi2: 0.05292564635454383
[2025-10-08 21:48:10] 2025-10-09 01:47:10,723 | INFO     | -- intersect: -6573963287.574776
[2025-10-08 21:48:10] 2025-10-09 01:47:10,723 | INFO     | current memory leak: 3.74 B/s (using 135 data points, chi2=0.05)
[2025-10-08 21:48:10] 2025-10-09 01:47:10,723 | INFO     | could have reported an average CPU frequency of 2921 MHz (9 samples)
[2025-10-08 21:48:10] 2025-10-09 01:47:10,723 | INFO     | ..............................
[2025-10-08 21:48:10] 2025-10-09 01:47:10,723 | INFO     | . Timing measurements:
[2025-10-08 21:48:10] 2025-10-09 01:47:10,723 | INFO     | . get job = 0 s
[2025-10-08 21:48:10] 2025-10-09 01:47:10,723 | INFO     | . initial setup = 2 s
[2025-10-08 21:48:10] 2025-10-09 01:47:10,723 | INFO     | . payload setup = 6 s
[2025-10-08 21:48:10] 2025-10-09 01:47:10,723 | INFO     | . stage-in = 0 s
[2025-10-08 21:48:10] 2025-10-09 01:47:10,723 | INFO     | . payload execution = 9826 s
[2025-10-08 21:48:10] 2025-10-09 01:47:10,723 | INFO     | . stage-out = 0 s
[2025-10-08 21:48:10] 2025-10-09 01:47:10,724 | INFO     | . log creation = 0 s
[2025-10-08 21:48:10] 2025-10-09 01:47:10,724 | INFO     | ..............................
[2025-10-08 21:48:10] 2025-10-09 01:47:10,769 | INFO     | 
[2025-10-08 21:48:10] 2025-10-09 01:47:10,770 | INFO     | job summary report
[2025-10-08 21:48:10] 2025-10-09 01:47:10,770 | INFO     | --------------------------------------------------
[2025-10-08 21:48:10] 2025-10-09 01:47:10,770 | INFO     | PanDA job id: 6836597994
[2025-10-08 21:48:10] 2025-10-09 01:47:10,770 | INFO     | task id: 46676269
[2025-10-08 21:48:10] 2025-10-09 01:47:10,770 | INFO     | errors: (none)
[2025-10-08 21:48:10] 2025-10-09 01:47:10,770 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 21:48:10] 2025-10-09 01:47:10,770 | INFO     | pilot state: finished 
[2025-10-08 21:48:10] 2025-10-09 01:47:10,770 | INFO     | transexitcode: 0
[2025-10-08 21:48:10] 2025-10-09 01:47:10,770 | INFO     | exeerrorcode: 0
[2025-10-08 21:48:10] 2025-10-09 01:47:10,771 | INFO     | exeerrordiag: 
[2025-10-08 21:48:10] 2025-10-09 01:47:10,771 | INFO     | exitcode: 0
[2025-10-08 21:48:10] 2025-10-09 01:47:10,771 | INFO     | exitmsg: OK
[2025-10-08 21:48:10] 2025-10-09 01:47:10,771 | INFO     | cpuconsumptiontime: 41262 s
[2025-10-08 21:48:10] 2025-10-09 01:47:10,771 | INFO     | nevents: 400
[2025-10-08 21:48:10] 2025-10-09 01:47:10,771 | INFO     | neventsw: 0
[2025-10-08 21:48:10] 2025-10-09 01:47:10,771 | INFO     | pid: 1876921
[2025-10-08 21:48:10] 2025-10-09 01:47:10,771 | INFO     | pgrp: 1876921
[2025-10-08 21:48:10] 2025-10-09 01:47:10,771 | INFO     | corecount: 9
[2025-10-08 21:48:10] 2025-10-09 01:47:10,771 | INFO     | event service: False
[2025-10-08 21:48:10] 2025-10-09 01:47:10,771 | INFO     | sizes: {0: 2348681, 1: 2348880, 5: 2349142, 12: 2349198, 9836: 2377870, 9837: 2386868, 9840: 2387052, 9847: 2387310}
[2025-10-08 21:48:10] 2025-10-09 01:47:10,771 | INFO     | --------------------------------------------------
[2025-10-08 21:48:10] 2025-10-09 01:47:10,772 | INFO     | 
[2025-10-08 21:48:10] 2025-10-09 01:47:10,772 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-08 21:48:10] 2025-10-09 01:47:10,787 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,787 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,787 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,788 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,788 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,788 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,788 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,788 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,788 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,788 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,788 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,788 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,789 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,789 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,789 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 21:48:10] 2025-10-09 01:47:10,789 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,789 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 21:48:10] 2025-10-09 01:47:10,789 | INFO     | job 6836597994 has completed (purged errors)
[2025-10-08 21:48:10] 2025-10-09 01:47:10,789 | INFO     | overall cleanup function is called
[2025-10-08 21:48:10] 2025-10-09 01:47:11,794 | INFO     | --- collectZombieJob: --- 10, [1876921]
[2025-10-08 21:48:10] 2025-10-09 01:47:11,795 | INFO     | zombie collector waiting for pid 1876921
[2025-10-08 21:48:10] 2025-10-09 01:47:11,795 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 21:48:10] 2025-10-09 01:47:11,795 | INFO     | collected zombie processes
[2025-10-08 21:48:10] 2025-10-09 01:47:11,795 | INFO     | will attempt to kill all subprocesses of pid=1876921
[2025-10-08 21:48:10] 2025-10-09 01:47:12,157 | INFO     | process IDs to be killed: [1876921] (in reverse order)
[2025-10-08 21:48:10] 2025-10-09 01:47:12,245 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 21:48:10] 2025-10-09 01:47:12,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 21:48:10] 2025-10-09 01:47:12,260 | INFO     | did not find any defunct processes belonging to 1876921
[2025-10-08 21:48:10] 2025-10-09 01:47:12,274 | INFO     | did not find any defunct processes belonging to 1876921
[2025-10-08 21:48:10] 2025-10-09 01:47:12,275 | INFO     | ready for new job
[2025-10-08 21:48:10] 2025-10-09 01:47:12,275 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 21:48:10] 2025-10-09 01:47:12,278 | INFO     | ***************************************
[2025-10-08 21:48:10] 2025-10-09 01:47:12,278 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 21:48:10] 2025-10-09 01:47:12,278 | INFO     | ***************************************
[2025-10-08 21:48:10] 2025-10-09 01:47:12,278 | INFO     | 
[2025-10-08 21:48:10] 2025-10-09 01:47:12,294 | INFO     | architecture information:
[2025-10-08 21:48:10] 2025-10-09 01:47:12,295 | INFO     | executing command: cat /etc/os-release
[2025-10-08 21:48:10] 2025-10-09 01:47:12,312 | INFO     | cat /etc/os-release:
[2025-10-08 21:48:10] NAME="CentOS Linux"
[2025-10-08 21:48:10] VERSION="7 (Core)"
[2025-10-08 21:48:10] ID="centos"
[2025-10-08 21:48:10] ID_LIKE="rhel fedora"
[2025-10-08 21:48:10] VERSION_ID="7"
[2025-10-08 21:48:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 21:48:10] ANSI_COLOR="0;31"
[2025-10-08 21:48:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 21:48:10] HOME_URL="https://www.centos.org/"
[2025-10-08 21:48:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 21:48:10] 
[2025-10-08 21:48:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 21:48:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 21:48:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 21:48:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 21:48:10] 
[2025-10-08 21:48:10] 2025-10-09 01:47:12,313 | INFO     | ***************************************
[2025-10-08 21:48:10] 2025-10-09 01:47:12,815 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-08 21:48:10] 2025-10-09 01:47:12,831 | INFO     | sufficient remaining disk space (75047632896 B)
[2025-10-08 21:48:10] 2025-10-09 01:47:12,831 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 21:48:10] 2025-10-09 01:47:12,832 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 21:48:10] 2025-10-09 01:47:12,832 | INFO     | update_server=False
[2025-10-08 21:48:10] 2025-10-09 01:47:12,832 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 21:48:10] 2025-10-09 01:47:12,832 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 21:48:10] 2025-10-09 01:47:13,186 | INFO     | all data control threads have been joined
[2025-10-08 21:48:10] 2025-10-09 01:47:13,727 | INFO     | all payload control threads have been joined
[2025-10-08 21:48:10] 2025-10-09 01:47:13,826 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 21:48:10] 2025-10-09 01:47:13,827 | INFO     | aborting loop
[2025-10-08 21:48:10] 2025-10-09 01:47:13,837 | INFO     | [payload] failed_post thread has finished
[2025-10-08 21:48:10] 2025-10-09 01:47:13,837 | INFO     | [job] retrieve thread has finished
[2025-10-08 21:48:10] 2025-10-09 01:47:13,943 | INFO     | all job control threads have been joined
[2025-10-08 21:48:10] 2025-10-09 01:47:14,001 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 21:48:10] 2025-10-09 01:47:14,062 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 21:48:10] 2025-10-09 01:47:14,191 | INFO     | [data] control thread has finished
[2025-10-08 21:48:10] 2025-10-09 01:47:14,264 | INFO     | [payload] validate_post thread has finished
[2025-10-08 21:48:10] 2025-10-09 01:47:14,273 | INFO     | [job] validate thread has finished
[2025-10-08 21:48:10] 2025-10-09 01:47:14,315 | INFO     | [data] copytool_in thread has finished
[2025-10-08 21:48:10] 2025-10-09 01:47:14,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 21:48:10] 2025-10-09 01:47:14,733 | INFO     | [payload] control thread has finished
[2025-10-08 21:48:10] 2025-10-09 01:47:14,817 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 21:48:10] 2025-10-09 01:47:14,832 | INFO     | [job] job monitor thread has finished
[2025-10-08 21:48:10] 2025-10-09 01:47:14,837 | INFO     | [data] copytool_out thread has finished
[2025-10-08 21:48:10] 2025-10-09 01:47:14,949 | INFO     | [job] control thread has finished
[2025-10-08 21:48:10] 2025-10-09 01:47:15,779 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 21:48:10] 2025-10-09 01:47:16,785 | INFO     | [job] queue monitor thread has finished
[2025-10-08 21:48:10] 2025-10-09 01:47:18,475 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 21:48:10] 2025-10-09 01:47:23,018 | INFO     | job.realtimelogging is not enabled
[2025-10-08 21:48:10] 2025-10-09 01:47:24,023 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 21:48:10] 2025-10-09 01:47:44,144 | INFO     | PID=1862195 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 21:48:10] 2025-10-09 01:47:44,145 | INFO     | .. there are 15 such processes running
[2025-10-08 21:48:10] 2025-10-09 01:47:44,145 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 21:48:10] 2025-10-09 01:47:44,145 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 21:48:10] 2025-10-09 01:47:44,145 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 21:48:10] 2025-10-09 01:47:46,636 [wrapper] supervise_pilot (15 min periods counter: 12)
[2025-10-08 21:48:10] 2025-10-09 01:48:04,589 | INFO     | [monitor] cgroup control has ended
[2025-10-08 21:48:10] 2025-10-09 01:48:04,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515305084736)>', '<ExcThread(monitor, started 140514678531840)>']
[2025-10-08 21:48:10] 2025-10-09 01:48:05,243 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 21:48:10] 2025-10-09 01:48:05,243 | INFO     | [monitor] control thread has ended
[2025-10-08 21:48:10] 2025-10-09 01:48:09,739 | INFO     | all workflow threads have been joined
[2025-10-08 21:48:10] 2025-10-09 01:48:09,740 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 21:48:10] 2025-10-09 01:48:09,740 | INFO     | traces error code: 0
[2025-10-08 21:48:10] 2025-10-09 01:48:09,740 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 21:48:10] 2025-10-09 01:48:09,864 [wrapper] ==== pilot stdout END ====
[2025-10-08 21:48:10] 2025-10-09 01:48:09,867 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 21:48:10] 2025-10-09 01:48:09,870 [wrapper] pilotpid: 1862195
[2025-10-08 21:48:10] 2025-10-09 01:48:09,873 [wrapper] Pilot exit status: 0
[2025-10-08 21:48:10] 2025-10-09 01:48:09,883 [wrapper] pandaids: 6836597994
[2025-10-08 21:48:10] 2025-10-09 01:48:09,963 [wrapper] cleanup supervisor_pilot 2610047 1862196
[2025-10-08 21:48:10] 2025-10-09 01:48:09,966 [wrapper] Test setup, not cleaning
[2025-10-08 21:48:10] 2025-10-09 01:48:09,969 [wrapper] apfmon messages muted
[2025-10-08 21:48:10] 2025-10-09 01:48:09,973 [wrapper] ==== wrapper stdout END ====
[2025-10-08 21:48:10] 2025-10-09 01:48:09,976 [wrapper] ==== wrapper stderr END ====
[2025-10-08 21:48:10]  *** Error codes and diagnostics ***
[2025-10-08 21:48:10]     "exeErrorCode": 0,
[2025-10-08 21:48:10]     "exeErrorDiag": "",
[2025-10-08 21:48:10]     "pilotErrorCode": 0,
[2025-10-08 21:48:10]     "pilotErrorDiag": "",
[2025-10-08 21:48:10]  *** Listing of results directory ***
[2025-10-08 21:48:10] total 411864
[2025-10-08 21:48:10] -rw-r--r--. 1 boincer umatlas    557409 Oct  8 18:57 pilot3.tar.gz
[2025-10-08 21:48:10] -rwx------. 1 boincer umatlas     36292 Oct  8 18:59 runpilot2-wrapper.sh
[2025-10-08 21:48:10] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 19:00 queuedata.json
[2025-10-08 21:48:10] -rw-r--r--. 1 boincer umatlas       100 Oct  8 19:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 21:48:10] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 19:02 run_atlas
[2025-10-08 21:48:10] -rw-r--r--. 1 boincer umatlas       105 Oct  8 19:02 job.xml
[2025-10-08 21:48:10] -rw-r--r--. 2 boincer umatlas 220739172 Oct  8 19:02 EVNT.46676267._000311.pool.root.1
[2025-10-08 21:48:10] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 19:02 start_atlas.sh
[2025-10-08 21:48:10] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 19:02 shared
[2025-10-08 21:48:10] -rw-r--r--. 2 boincer umatlas    569680 Oct  8 19:02 input.tar.gz
[2025-10-08 21:48:10] -rw-r--r--. 1 boincer umatlas         0 Oct  8 19:02 boinc_lockfile
[2025-10-08 21:48:10] -rw-r--r--. 1 boincer umatlas      2548 Oct  8 19:02 pandaJob.out
[2025-10-08 21:48:10] -rw-------. 1 boincer umatlas    979306 Oct  8 19:02 agis_schedconf.cvmfs.json
[2025-10-08 21:48:10] -rw-------. 1 boincer umatlas   1560401 Oct  8 19:02 agis_ddmendpoints.agis.ALL.json
[2025-10-08 21:48:10] drwx------. 5 boincer umatlas      4096 Oct  8 19:02 pilot3
[2025-10-08 21:48:10] -rw-r--r--. 1 boincer umatlas      6842 Oct  8 21:39 init_data.xml
[2025-10-08 21:48:10] -rw-------. 1 boincer umatlas 193614911 Oct  8 21:46 HITS.46676269._007801.pool.root.1
[2025-10-08 21:48:10] -rw-r--r--. 1 boincer umatlas       530 Oct  8 21:46 boinc_task_state.xml
[2025-10-08 21:48:10] -rw-------. 1 boincer umatlas        95 Oct  8 21:46 pilot_heartbeat.json
[2025-10-08 21:48:10] -rw-------. 1 boincer umatlas      1040 Oct  8 21:46 memory_monitor_summary.json
[2025-10-08 21:48:10] -rw-------. 1 boincer umatlas    409890 Oct  8 21:47 log.46676269._007801.job.log.tgz.1
[2025-10-08 21:48:10] -rw-------. 1 boincer umatlas      7817 Oct  8 21:47 heartbeat.json
[2025-10-08 21:48:10] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 21:48 boinc_mmap_file
[2025-10-08 21:48:10] -rw-r--r--. 1 boincer umatlas        27 Oct  8 21:48 wrapper_checkpoint.txt
[2025-10-08 21:48:10] -rw-------. 1 boincer umatlas      4896 Oct  8 21:48 pilotlog.txt
[2025-10-08 21:48:10] -rw-------. 1 boincer umatlas   1334710 Oct  8 21:48 log.46676269._007801.job.log.1
[2025-10-08 21:48:10] -rw-------. 1 boincer umatlas       357 Oct  8 21:48 output.list
[2025-10-08 21:48:10] -rw-r--r--. 1 boincer umatlas       620 Oct  8 21:48 runtime_log
[2025-10-08 21:48:10] -rw-------. 1 boincer umatlas   1761280 Oct  8 21:48 result.tar.gz
[2025-10-08 21:48:10] -rw-r--r--. 1 boincer umatlas      8708 Oct  8 21:48 runtime_log.err
[2025-10-08 21:48:10] -rw-------. 1 boincer umatlas       655 Oct  8 21:48 LrMKDmeJsQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmksMMDmOrirum.diag
[2025-10-08 21:48:10] -rw-r--r--. 1 boincer umatlas     21142 Oct  8 21:48 stderr.txt
[2025-10-08 21:48:10] HITS file was successfully produced:
[2025-10-08 21:48:10] -rw-------. 1 boincer umatlas 193614911 Oct  8 21:46 shared/HITS.pool.root.1
[2025-10-08 21:48:10]  *** Contents of shared directory: ***
[2025-10-08 21:48:10] total 406952
[2025-10-08 21:48:10] -rw-r--r--. 2 boincer umatlas 220739172 Oct  8 19:02 ATLAS.root_0
[2025-10-08 21:48:10] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 19:02 start_atlas.sh
[2025-10-08 21:48:10] -rw-r--r--. 2 boincer umatlas    569680 Oct  8 19:02 input.tar.gz
[2025-10-08 21:48:10] -rw-------. 1 boincer umatlas 193614911 Oct  8 21:46 HITS.pool.root.1
[2025-10-08 21:48:10] -rw-------. 1 boincer umatlas   1761280 Oct  8 21:48 result.tar.gz
21:48:12 (1857947): run_atlas exited; CPU time 41477.243913
21:48:12 (1857947): called boinc_finish(0)

</stderr_txt>
]]>

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