Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:03:10 (1876267): wrapper (7.7.26015): starting
19:03:10 (1876267): wrapper: running run_atlas (--nthreads 9)
[2025-10-08 19:03:10] Arguments: --nthreads 9
[2025-10-08 19:03:10] Threads: 9
[2025-10-08 19:03:10] Checking for CVMFS
[2025-10-08 19:03:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 19:03:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 19:03:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 19:03:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 19:03:10] 2.13.2.0 1556042 48022 403332 151488 2 99 24031408 29414401 12730 16776704 0 122004666 99.510 157621747 29045 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-08 19:03:10] CVMFS is ok
[2025-10-08 19:03:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 19:03:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 19:03:10] Further information can be found at the LHC@home message board.
[2025-10-08 19:03:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 19:03:10] Checking for apptainer binary...
[2025-10-08 19:03:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 19:03:10] Running /usr/bin/apptainer --version
[2025-10-08 19:03:10] apptainer version 1.4.3-1.el9
[2025-10-08 19:03:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 19:03:10] c6-5-37-4.aglt2.org
[2025-10-08 19:03:10] apptainer works
[2025-10-08 19:03:10] Set ATHENA_PROC_NUMBER=9
[2025-10-08 19:03:10] Set ATHENA_CORE_NUMBER=9
[2025-10-08 19:03:10] Starting ATLAS job with PandaID=6836597980
[2025-10-08 19:03:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 21:38:45]  *** The last 200 lines of the pilot log: ***
[2025-10-08 21:38:45] 2025-10-09 01:38:01,436 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 21:38:45] 2025-10-09 01:38:01,436 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 21:38:45] 2025-10-09 01:38:01,439 | INFO     | fitting pss+swap vs Time
[2025-10-08 21:38:45] 2025-10-09 01:38:01,440 | INFO     | sum of square deviations: 1088930044.7105308
[2025-10-08 21:38:45] 2025-10-09 01:38:01,441 | INFO     | sum of deviations: 11274312504.6842
[2025-10-08 21:38:45] 2025-10-09 01:38:01,441 | INFO     | mean x: 1759969235.5921052
[2025-10-08 21:38:45] 2025-10-09 01:38:01,441 | INFO     | mean y: 2146940.236842105
[2025-10-08 21:38:45] 2025-10-09 01:38:01,441 | INFO     | -- intersect: -18219816221.749622
[2025-10-08 21:38:45] 2025-10-09 01:38:01,441 | INFO     | intersect: -18219816221.749622
[2025-10-08 21:38:45] 2025-10-09 01:38:01,441 | INFO     | chi2: 3.0878642400399143
[2025-10-08 21:38:45] 2025-10-09 01:38:01,442 | INFO     | sum of square deviations: 984960423.850343
[2025-10-08 21:38:45] 2025-10-09 01:38:01,442 | INFO     | sum of deviations: 28583909020.693882
[2025-10-08 21:38:45] 2025-10-09 01:38:01,443 | INFO     | mean x: 1759969083.0884354
[2025-10-08 21:38:45] 2025-10-09 01:38:01,443 | INFO     | mean y: 2171849.4081632653
[2025-10-08 21:38:45] 2025-10-09 01:38:01,443 | INFO     | -- intersect: -51072769774.721085
[2025-10-08 21:38:45] 2025-10-09 01:38:01,443 | INFO     | intersect: -51072769774.721085
[2025-10-08 21:38:45] 2025-10-09 01:38:01,443 | INFO     | chi2: 1.5601276101527104
[2025-10-08 21:38:45] 2025-10-09 01:38:01,443 | INFO     | current chi2=1.5601276101527104 (change=49.47551158749959 %)
[2025-10-08 21:38:45] 2025-10-09 01:38:01,443 | INFO     | sum of square deviations: 887801358.929579
[2025-10-08 21:38:45] 2025-10-09 01:38:01,444 | INFO     | sum of deviations: 27798462998.577457
[2025-10-08 21:38:45] 2025-10-09 01:38:01,444 | INFO     | mean x: 1759968930.5633802
[2025-10-08 21:38:45] 2025-10-09 01:38:01,444 | INFO     | mean y: 2170592.88028169
[2025-10-08 21:38:45] 2025-10-09 01:38:01,445 | INFO     | -- intersect: -55105236827.51406
[2025-10-08 21:38:45] 2025-10-09 01:38:01,445 | INFO     | intersect: -55105236827.51406
[2025-10-08 21:38:45] 2025-10-09 01:38:01,445 | INFO     | chi2: 1.5566820498263143
[2025-10-08 21:38:45] 2025-10-09 01:38:01,445 | INFO     | current chi2=1.5566820498263143 (change=0.22085118576029997 %)
[2025-10-08 21:38:45] 2025-10-09 01:38:01,445 | INFO     | right removable region: 141
[2025-10-08 21:38:45] 2025-10-09 01:38:01,445 | INFO     | sum of square deviations: 984961034.6666669
[2025-10-08 21:38:45] 2025-10-09 01:38:01,446 | INFO     | sum of deviations: -10461885044.238096
[2025-10-08 21:38:45] 2025-10-09 01:38:01,446 | INFO     | mean x: 1759969388.0952382
[2025-10-08 21:38:45] 2025-10-09 01:38:01,446 | INFO     | mean y: 2178409.088435374
[2025-10-08 21:38:45] 2025-10-09 01:38:01,446 | INFO     | -- intersect: 18695910213.272636
[2025-10-08 21:38:45] 2025-10-09 01:38:01,446 | INFO     | intersect: 18695910213.272636
[2025-10-08 21:38:45] 2025-10-09 01:38:01,447 | INFO     | chi2: 1.6144314298952436
[2025-10-08 21:38:45] 2025-10-09 01:38:01,447 | INFO     | current chi2=1.6144314298952436 (change=47.71689088655092 %)
[2025-10-08 21:38:45] 2025-10-09 01:38:01,447 | INFO     | sum of square deviations: 887829362.1197218
[2025-10-08 21:38:45] 2025-10-09 01:38:01,448 | INFO     | sum of deviations: -9830589113.028172
[2025-10-08 21:38:45] 2025-10-09 01:38:01,448 | INFO     | mean x: 1759969540.5985916
[2025-10-08 21:38:45] 2025-10-09 01:38:01,448 | INFO     | mean y: 2177399.8591549294
[2025-10-08 21:38:45] 2025-10-09 01:38:01,448 | INFO     | -- intersect: 19489635399.4028
[2025-10-08 21:38:45] 2025-10-09 01:38:01,448 | INFO     | intersect: 19489635399.4028
[2025-10-08 21:38:45] 2025-10-09 01:38:01,448 | INFO     | chi2: 1.6140527770073714
[2025-10-08 21:38:45] 2025-10-09 01:38:01,448 | INFO     | current chi2=1.6140527770073714 (change=0.023454256455894777 %)
[2025-10-08 21:38:45] 2025-10-09 01:38:01,448 | INFO     | left removable region: 20
[2025-10-08 21:38:45] 2025-10-09 01:38:01,449 | INFO     | sum of square deviations: 549278533.4710754
[2025-10-08 21:38:45] 2025-10-09 01:38:01,449 | INFO     | sum of deviations: 3854833964.628099
[2025-10-08 21:38:45] 2025-10-09 01:38:01,449 | INFO     | mean x: 1759969510.0661156
[2025-10-08 21:38:45] 2025-10-09 01:38:01,449 | INFO     | mean y: 2211772.4214876033
[2025-10-08 21:38:45] 2025-10-09 01:38:01,449 | INFO     | -- intersect: -12349245331.20843
[2025-10-08 21:38:45] 2025-10-09 01:38:01,450 | INFO     | intersect: -12349245331.20843
[2025-10-08 21:38:45] 2025-10-09 01:38:01,450 | INFO     | chi2: 0.03197428665140956
[2025-10-08 21:38:45] 2025-10-09 01:38:01,450 | INFO     | -- intersect: -12349245331.20843
[2025-10-08 21:38:45] 2025-10-09 01:38:01,450 | INFO     | current memory leak: 7.02 B/s (using 121 data points, chi2=0.03)
[2025-10-08 21:38:45] 2025-10-09 01:38:01,451 | INFO     | could have reported an average CPU frequency of 2874 MHz (9 samples)
[2025-10-08 21:38:45] 2025-10-09 01:38:01,451 | INFO     | ..............................
[2025-10-08 21:38:45] 2025-10-09 01:38:01,451 | INFO     | . Timing measurements:
[2025-10-08 21:38:45] 2025-10-09 01:38:01,451 | INFO     | . get job = 0 s
[2025-10-08 21:38:45] 2025-10-09 01:38:01,451 | INFO     | . initial setup = 2 s
[2025-10-08 21:38:45] 2025-10-09 01:38:01,451 | INFO     | . payload setup = 6 s
[2025-10-08 21:38:45] 2025-10-09 01:38:01,451 | INFO     | . stage-in = 0 s
[2025-10-08 21:38:45] 2025-10-09 01:38:01,451 | INFO     | . payload execution = 9244 s
[2025-10-08 21:38:45] 2025-10-09 01:38:01,451 | INFO     | . stage-out = 1 s
[2025-10-08 21:38:45] 2025-10-09 01:38:01,451 | INFO     | . log creation = 0 s
[2025-10-08 21:38:45] 2025-10-09 01:38:01,451 | INFO     | ..............................
[2025-10-08 21:38:45] 2025-10-09 01:38:02,081 | INFO     | 
[2025-10-08 21:38:45] 2025-10-09 01:38:02,082 | INFO     | job summary report
[2025-10-08 21:38:45] 2025-10-09 01:38:02,082 | INFO     | --------------------------------------------------
[2025-10-08 21:38:45] 2025-10-09 01:38:02,082 | INFO     | PanDA job id: 6836597980
[2025-10-08 21:38:45] 2025-10-09 01:38:02,082 | INFO     | task id: 46676269
[2025-10-08 21:38:45] 2025-10-09 01:38:02,082 | INFO     | errors: (none)
[2025-10-08 21:38:45] 2025-10-09 01:38:02,082 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 21:38:45] 2025-10-09 01:38:02,082 | INFO     | pilot state: finished 
[2025-10-08 21:38:45] 2025-10-09 01:38:02,082 | INFO     | transexitcode: 0
[2025-10-08 21:38:45] 2025-10-09 01:38:02,082 | INFO     | exeerrorcode: 0
[2025-10-08 21:38:45] 2025-10-09 01:38:02,083 | INFO     | exeerrordiag: 
[2025-10-08 21:38:45] 2025-10-09 01:38:02,083 | INFO     | exitcode: 0
[2025-10-08 21:38:45] 2025-10-09 01:38:02,083 | INFO     | exitmsg: OK
[2025-10-08 21:38:45] 2025-10-09 01:38:02,083 | INFO     | cpuconsumptiontime: 38346 s
[2025-10-08 21:38:45] 2025-10-09 01:38:02,083 | INFO     | nevents: 400
[2025-10-08 21:38:45] 2025-10-09 01:38:02,083 | INFO     | neventsw: 0
[2025-10-08 21:38:45] 2025-10-09 01:38:02,083 | INFO     | pid: 1916082
[2025-10-08 21:38:45] 2025-10-09 01:38:02,083 | INFO     | pgrp: 1916082
[2025-10-08 21:38:45] 2025-10-09 01:38:02,083 | INFO     | corecount: 9
[2025-10-08 21:38:45] 2025-10-09 01:38:02,083 | INFO     | event service: False
[2025-10-08 21:38:45] 2025-10-09 01:38:02,083 | INFO     | sizes: {0: 2348852, 4: 2349114, 11: 2349142, 9254: 2377735, 9255: 2377734, 9257: 2386972, 9263: 2387174}
[2025-10-08 21:38:45] 2025-10-09 01:38:02,083 | INFO     | --------------------------------------------------
[2025-10-08 21:38:45] 2025-10-09 01:38:02,084 | INFO     | 
[2025-10-08 21:38:45] 2025-10-09 01:38:02,084 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-08 21:38:45] 2025-10-09 01:38:02,127 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,127 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,127 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,127 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,128 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,128 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,128 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,128 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,128 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,129 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,129 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,129 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,129 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,129 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 21:38:45] 2025-10-09 01:38:02,129 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,129 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 21:38:45] 2025-10-09 01:38:02,129 | INFO     | job 6836597980 has completed (purged errors)
[2025-10-08 21:38:45] 2025-10-09 01:38:02,130 | INFO     | overall cleanup function is called
[2025-10-08 21:38:45] 2025-10-09 01:38:03,159 | INFO     | --- collectZombieJob: --- 10, [1916082]
[2025-10-08 21:38:45] 2025-10-09 01:38:03,159 | INFO     | zombie collector waiting for pid 1916082
[2025-10-08 21:38:45] 2025-10-09 01:38:03,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 21:38:45] 2025-10-09 01:38:03,160 | INFO     | collected zombie processes
[2025-10-08 21:38:45] 2025-10-09 01:38:03,160 | INFO     | will attempt to kill all subprocesses of pid=1916082
[2025-10-08 21:38:45] 2025-10-09 01:38:04,196 | INFO     | process IDs to be killed: [1916082] (in reverse order)
[2025-10-08 21:38:45] 2025-10-09 01:38:04,374 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 21:38:45] 2025-10-09 01:38:04,375 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 21:38:45] 2025-10-09 01:38:04,404 | INFO     | did not find any defunct processes belonging to 1916082
[2025-10-08 21:38:45] 2025-10-09 01:38:04,420 | INFO     | did not find any defunct processes belonging to 1916082
[2025-10-08 21:38:45] 2025-10-09 01:38:04,420 | INFO     | ready for new job
[2025-10-08 21:38:45] 2025-10-09 01:38:04,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 21:38:45] 2025-10-09 01:38:04,423 | INFO     | ***************************************
[2025-10-08 21:38:45] 2025-10-09 01:38:04,423 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 21:38:45] 2025-10-09 01:38:04,423 | INFO     | ***************************************
[2025-10-08 21:38:45] 2025-10-09 01:38:04,423 | INFO     | 
[2025-10-08 21:38:45] 2025-10-09 01:38:04,439 | INFO     | architecture information:
[2025-10-08 21:38:45] 2025-10-09 01:38:04,449 | INFO     | executing command: cat /etc/os-release
[2025-10-08 21:38:45] 2025-10-09 01:38:04,531 | INFO     | cat /etc/os-release:
[2025-10-08 21:38:45] NAME="CentOS Linux"
[2025-10-08 21:38:45] VERSION="7 (Core)"
[2025-10-08 21:38:45] ID="centos"
[2025-10-08 21:38:45] ID_LIKE="rhel fedora"
[2025-10-08 21:38:45] VERSION_ID="7"
[2025-10-08 21:38:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 21:38:45] ANSI_COLOR="0;31"
[2025-10-08 21:38:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 21:38:45] HOME_URL="https://www.centos.org/"
[2025-10-08 21:38:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 21:38:45] 
[2025-10-08 21:38:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 21:38:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 21:38:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 21:38:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 21:38:45] 
[2025-10-08 21:38:45] 2025-10-09 01:38:04,531 | INFO     | ***************************************
[2025-10-08 21:38:45] 2025-10-09 01:38:05,053 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-08 21:38:45] 2025-10-09 01:38:05,171 | INFO     | sufficient remaining disk space (73361522688 B)
[2025-10-08 21:38:45] 2025-10-09 01:38:05,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 21:38:45] 2025-10-09 01:38:05,172 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 21:38:45] 2025-10-09 01:38:05,172 | INFO     | update_server=False
[2025-10-08 21:38:45] 2025-10-09 01:38:05,173 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 21:38:45] 2025-10-09 01:38:05,174 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 21:38:45] 2025-10-09 01:38:05,175 | INFO     | aborting loop
[2025-10-08 21:38:45] 2025-10-09 01:38:06,178 | INFO     | [job] retrieve thread has finished
[2025-10-08 21:38:45] 2025-10-09 01:38:06,180 | INFO     | [job] job monitor thread has finished
[2025-10-08 21:38:45] 2025-10-09 01:38:06,236 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 21:38:45] 2025-10-09 01:38:06,251 | INFO     | [payload] validate_post thread has finished
[2025-10-08 21:38:45] 2025-10-09 01:38:06,258 | INFO     | all data control threads have been joined
[2025-10-08 21:38:45] 2025-10-09 01:38:06,316 | INFO     | all payload control threads have been joined
[2025-10-08 21:38:45] 2025-10-09 01:38:06,363 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 21:38:45] 2025-10-09 01:38:06,621 | INFO     | all job control threads have been joined
[2025-10-08 21:38:45] 2025-10-09 01:38:06,692 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 21:38:45] 2025-10-09 01:38:07,009 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 21:38:45] 2025-10-09 01:38:07,010 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 21:38:45] 2025-10-09 01:38:07,015 | INFO     | [data] copytool_in thread has finished
[2025-10-08 21:38:45] 2025-10-09 01:38:07,018 | INFO     | [job] validate thread has finished
[2025-10-08 21:38:45] 2025-10-09 01:38:07,026 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 21:38:45] 2025-10-09 01:38:07,211 | INFO     | [payload] failed_post thread has finished
[2025-10-08 21:38:45] 2025-10-09 01:38:07,264 | INFO     | [data] control thread has finished
[2025-10-08 21:38:45] 2025-10-09 01:38:07,322 | INFO     | [payload] control thread has finished
[2025-10-08 21:38:45] 2025-10-09 01:38:07,627 | INFO     | [job] control thread has finished
[2025-10-08 21:38:45] 2025-10-09 01:38:07,698 | INFO     | [job] queue monitor thread has finished
[2025-10-08 21:38:45] 2025-10-09 01:38:08,244 | INFO     | [data] copytool_out thread has finished
[2025-10-08 21:38:45] 2025-10-09 01:38:10,372 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 21:38:45] 2025-10-09 01:38:15,713 | INFO     | job.realtimelogging is not enabled
[2025-10-08 21:38:45] 2025-10-09 01:38:16,720 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 21:38:45] 2025-10-09 01:38:34,274 | INFO     | PID=1889717 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 21:38:45] 2025-10-09 01:38:34,274 | INFO     | .. there are 18 such processes running
[2025-10-08 21:38:45] 2025-10-09 01:38:34,274 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 21:38:45] 2025-10-09 01:38:34,275 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 21:38:45] 2025-10-09 01:38:34,275 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 21:38:45] 2025-10-09 01:38:39,081 | INFO     | [monitor] cgroup control has ended
[2025-10-08 21:38:45] 2025-10-09 01:38:40,185 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139903698024256)>', '<ExcThread(monitor, started 139902838626048)>']
[2025-10-08 21:38:45] 2025-10-09 01:38:40,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 21:38:45] 2025-10-09 01:38:40,321 | INFO     | [monitor] control thread has ended
[2025-10-08 21:38:45] 2025-10-09 01:38:45,211 | INFO     | all workflow threads have been joined
[2025-10-08 21:38:45] 2025-10-09 01:38:45,211 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 21:38:45] 2025-10-09 01:38:45,212 | INFO     | traces error code: 0
[2025-10-08 21:38:45] 2025-10-09 01:38:45,212 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 21:38:45] 2025-10-09 01:38:45,439 [wrapper] ==== pilot stdout END ====
[2025-10-08 21:38:45] 2025-10-09 01:38:45,442 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 21:38:45] 2025-10-09 01:38:45,444 [wrapper] pilotpid: 1889717
[2025-10-08 21:38:45] 2025-10-09 01:38:45,447 [wrapper] Pilot exit status: 0
[2025-10-08 21:38:45] 2025-10-09 01:38:45,465 [wrapper] pandaids: 6836597980
[2025-10-08 21:38:45] 2025-10-09 01:38:45,529 [wrapper] cleanup supervisor_pilot 2539268 1889718
[2025-10-08 21:38:45] 2025-10-09 01:38:45,532 [wrapper] Test setup, not cleaning
[2025-10-08 21:38:45] 2025-10-09 01:38:45,535 [wrapper] apfmon messages muted
[2025-10-08 21:38:45] 2025-10-09 01:38:45,542 [wrapper] ==== wrapper stdout END ====
[2025-10-08 21:38:45] 2025-10-09 01:38:45,546 [wrapper] ==== wrapper stderr END ====
[2025-10-08 21:38:45]  *** Error codes and diagnostics ***
[2025-10-08 21:38:45]     "exeErrorCode": 0,
[2025-10-08 21:38:45]     "exeErrorDiag": "",
[2025-10-08 21:38:45]     "pilotErrorCode": 0,
[2025-10-08 21:38:45]     "pilotErrorDiag": "",
[2025-10-08 21:38:45]  *** Listing of results directory ***
[2025-10-08 21:38:45] total 407180
[2025-10-08 21:38:45] -rw-r--r--. 1 boincer umatlas    557409 Oct  8 18:57 pilot3.tar.gz
[2025-10-08 21:38:45] -rwx------. 1 boincer umatlas     36292 Oct  8 18:59 runpilot2-wrapper.sh
[2025-10-08 21:38:45] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 19:00 queuedata.json
[2025-10-08 21:38:45] -rw-r--r--. 1 boincer umatlas       100 Oct  8 19:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 21:38:45] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 19:03 run_atlas
[2025-10-08 21:38:45] -rw-r--r--. 1 boincer umatlas       105 Oct  8 19:03 job.xml
[2025-10-08 21:38:45] -rw-r--r--. 2 boincer umatlas 221954344 Oct  8 19:03 EVNT.46676267._000310.pool.root.1
[2025-10-08 21:38:45] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 19:03 start_atlas.sh
[2025-10-08 21:38:45] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 19:03 shared
[2025-10-08 21:38:45] -rw-r--r--. 2 boincer umatlas    569682 Oct  8 19:03 input.tar.gz
[2025-10-08 21:38:45] -rw-r--r--. 1 boincer umatlas         0 Oct  8 19:03 boinc_lockfile
[2025-10-08 21:38:45] -rw-r--r--. 1 boincer umatlas      2548 Oct  8 19:03 pandaJob.out
[2025-10-08 21:38:45] -rw-------. 1 boincer umatlas    979306 Oct  8 19:03 agis_schedconf.cvmfs.json
[2025-10-08 21:38:45] -rw-------. 1 boincer umatlas   1560401 Oct  8 19:03 agis_ddmendpoints.agis.ALL.json
[2025-10-08 21:38:45] drwx------. 5 boincer umatlas      4096 Oct  8 19:03 pilot3
[2025-10-08 21:38:45] -rw-r--r--. 1 boincer umatlas      6842 Oct  8 21:31 init_data.xml
[2025-10-08 21:38:45] -rw-------. 1 boincer umatlas 187769330 Oct  8 21:36 HITS.46676269._007787.pool.root.1
[2025-10-08 21:38:45] -rw-r--r--. 1 boincer umatlas       529 Oct  8 21:36 boinc_task_state.xml
[2025-10-08 21:38:45] -rw-------. 1 boincer umatlas      1039 Oct  8 21:37 memory_monitor_summary.json
[2025-10-08 21:38:45] -rw-------. 1 boincer umatlas    416097 Oct  8 21:37 log.46676269._007787.job.log.tgz.1
[2025-10-08 21:38:45] -rw-------. 1 boincer umatlas      7819 Oct  8 21:38 heartbeat.json
[2025-10-08 21:38:45] -rw-------. 1 boincer umatlas        95 Oct  8 21:38 pilot_heartbeat.json
[2025-10-08 21:38:45] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 21:38 boinc_mmap_file
[2025-10-08 21:38:45] -rw-r--r--. 1 boincer umatlas        27 Oct  8 21:38 wrapper_checkpoint.txt
[2025-10-08 21:38:45] -rw-------. 1 boincer umatlas      4896 Oct  8 21:38 pilotlog.txt
[2025-10-08 21:38:45] -rw-------. 1 boincer umatlas   1243519 Oct  8 21:38 log.46676269._007787.job.log.1
[2025-10-08 21:38:45] -rw-------. 1 boincer umatlas       357 Oct  8 21:38 output.list
[2025-10-08 21:38:45] -rw-r--r--. 1 boincer umatlas       620 Oct  8 21:38 runtime_log
[2025-10-08 21:38:45] -rw-------. 1 boincer umatlas   1679360 Oct  8 21:38 result.tar.gz
[2025-10-08 21:38:45] -rw-r--r--. 1 boincer umatlas      8708 Oct  8 21:38 runtime_log.err
[2025-10-08 21:38:45] -rw-------. 1 boincer umatlas       653 Oct  8 21:38 qXCODmdJsQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmXsMMDmpfyX9m.diag
[2025-10-08 21:38:45] -rw-r--r--. 1 boincer umatlas     20966 Oct  8 21:38 stderr.txt
[2025-10-08 21:38:45] HITS file was successfully produced:
[2025-10-08 21:38:45] -rw-------. 1 boincer umatlas 187769330 Oct  8 21:36 shared/HITS.pool.root.1
[2025-10-08 21:38:45]  *** Contents of shared directory: ***
[2025-10-08 21:38:45] total 402352
[2025-10-08 21:38:45] -rw-r--r--. 2 boincer umatlas 221954344 Oct  8 19:03 ATLAS.root_0
[2025-10-08 21:38:45] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 19:03 start_atlas.sh
[2025-10-08 21:38:45] -rw-r--r--. 2 boincer umatlas    569682 Oct  8 19:03 input.tar.gz
[2025-10-08 21:38:45] -rw-------. 1 boincer umatlas 187769330 Oct  8 21:36 HITS.pool.root.1
[2025-10-08 21:38:45] -rw-------. 1 boincer umatlas   1679360 Oct  8 21:38 result.tar.gz
21:38:47 (1876267): run_atlas exited; CPU time 38635.775277
21:38:47 (1876267): called boinc_finish(0)

</stderr_txt>
]]>

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